HEADER SIGNALING PROTEIN 17-FEB-22 7U08 TITLE STRUCTURE OF CD148 FIBRONECTIN TYPE III DOMAIN 1 AND 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE ETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE ETA,R-PTP-ETA,DENSITY-ENHANCED COMPND 5 PHOSPHATASE 1,DEP-1,HPTP ETA,PROTEIN-TYROSINE PHOSPHATASE RECEPTOR COMPND 6 TYPE J,R-PTP-J; COMPND 7 EC: 3.1.3.48; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTPRJ, DEP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RECEPTOR TYPE PROTEIN TYROSINE PHOSPHATASE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.ZHOU,J.ZHU REVDAT 1 22-FEB-23 7U08 0 JRNL AUTH D.ZHOU,J.ZHU JRNL TITL STRUCTURE OF CD148 FIBRONECTIN TYPE III DOMAIN 1 AND 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 5286 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.271 REMARK 3 R VALUE (WORKING SET) : 0.268 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.083 REMARK 3 FREE R VALUE TEST SET COUNT : 533 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7369 - 5.2249 1.00 1302 145 0.2528 0.2950 REMARK 3 2 5.2249 - 4.1599 0.99 1213 134 0.2386 0.2551 REMARK 3 3 4.1599 - 3.6378 0.96 1158 129 0.3139 0.3566 REMARK 3 4 3.6378 - 3.3070 0.91 1080 125 0.3963 0.4121 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.486 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.876 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 135.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 155.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1518 REMARK 3 ANGLE : 0.830 2070 REMARK 3 CHIRALITY : 0.054 242 REMARK 3 PLANARITY : 0.006 264 REMARK 3 DIHEDRAL : 5.815 913 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 30.1465 40.7807 31.6548 REMARK 3 T TENSOR REMARK 3 T11: 1.0459 T22: 1.1647 REMARK 3 T33: 1.1123 T12: -0.0166 REMARK 3 T13: -0.1077 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 7.2714 L22: 6.4470 REMARK 3 L33: 2.6035 L12: -1.8587 REMARK 3 L13: 0.1943 L23: 1.1852 REMARK 3 S TENSOR REMARK 3 S11: -0.2582 S12: -0.4898 S13: 0.1343 REMARK 3 S21: 0.9407 S22: -0.2058 S23: 0.3951 REMARK 3 S31: 0.1813 S32: -0.0594 S33: 0.5525 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7U08 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000263266. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97850 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5502 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 38.80 REMARK 200 R MERGE (I) : 0.15800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.36 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.25M MGCL2, 0.1M HEPES PH7.5, 25% REMARK 280 PEG3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.48133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 19.24067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.86100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 9.62033 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.10167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 38.48133 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 19.24067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 9.62033 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 28.86100 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 48.10167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 GLY A 3 REMARK 465 THR A 4 REMARK 465 PRO A 5 REMARK 465 SER A 6 REMARK 465 PRO A 7 REMARK 465 ILE A 8 REMARK 465 PRO A 9 REMARK 465 ASP A 10 REMARK 465 PRO A 11 REMARK 465 SER A 12 REMARK 465 VAL A 13 REMARK 465 ALA A 14 REMARK 465 THR A 15 REMARK 465 VAL A 16 REMARK 465 ALA A 17 REMARK 465 THR A 18 REMARK 465 GLY A 19 REMARK 465 GLU A 20 REMARK 465 ASN A 21 REMARK 465 GLY A 22 REMARK 465 ILE A 23 REMARK 465 THR A 24 REMARK 465 GLN A 25 REMARK 465 ILE A 26 REMARK 465 SER A 27 REMARK 465 SER A 28 REMARK 465 THR A 29 REMARK 465 ALA A 30 REMARK 465 GLU A 31 REMARK 465 SER A 32 REMARK 465 PHE A 33 REMARK 465 HIS A 34 REMARK 465 LYS A 35 REMARK 465 GLN A 36 REMARK 465 ASN A 37 REMARK 465 GLY A 38 REMARK 465 THR A 39 REMARK 465 GLY A 40 REMARK 465 THR A 41 REMARK 465 PRO A 42 REMARK 465 GLN A 43 REMARK 465 VAL A 44 REMARK 465 GLU A 45 REMARK 465 THR A 46 REMARK 465 ASN A 47 REMARK 465 THR A 48 REMARK 465 SER A 49 REMARK 465 GLU A 50 REMARK 465 ASP A 51 REMARK 465 GLY A 52 REMARK 465 GLU A 53 REMARK 465 SER A 54 REMARK 465 SER A 55 REMARK 465 GLY A 56 REMARK 465 ALA A 57 REMARK 465 ASN A 58 REMARK 465 ASP A 59 REMARK 465 SER A 60 REMARK 465 LEU A 61 REMARK 465 ARG A 62 REMARK 465 THR A 63 REMARK 465 PRO A 64 REMARK 465 GLU A 65 REMARK 465 GLN A 66 REMARK 465 GLY A 67 REMARK 465 SER A 68 REMARK 465 ASN A 69 REMARK 465 GLY A 70 REMARK 465 THR A 71 REMARK 465 ASP A 72 REMARK 465 GLY A 73 REMARK 465 ALA A 74 REMARK 465 SER A 75 REMARK 465 GLN A 76 REMARK 465 LYS A 77 REMARK 465 THR A 78 REMARK 465 PRO A 79 REMARK 465 SER A 80 REMARK 465 SER A 81 REMARK 465 THR A 82 REMARK 465 GLY A 83 REMARK 465 GLU A 212 REMARK 465 GLU A 213 REMARK 465 LEU A 214 REMARK 465 THR A 215 REMARK 465 GLN A 216 REMARK 465 ASP A 217 REMARK 465 SER A 218 REMARK 465 LYS A 244 REMARK 465 THR A 245 REMARK 465 LYS A 246 REMARK 465 GLY A 247 REMARK 465 ASP A 248 REMARK 465 PRO A 249 REMARK 465 LEU A 250 REMARK 465 GLY A 251 REMARK 465 THR A 252 REMARK 465 GLU A 253 REMARK 465 GLY A 254 REMARK 465 GLY A 255 REMARK 465 LEU A 256 REMARK 465 ASP A 257 REMARK 465 ALA A 258 REMARK 465 SER A 259 REMARK 465 ASN A 260 REMARK 465 THR A 261 REMARK 465 GLU A 262 REMARK 465 ARG A 263 REMARK 465 SER A 264 REMARK 465 ARG A 265 REMARK 465 ALA A 266 REMARK 465 GLY A 267 REMARK 465 SER A 268 REMARK 465 PRO A 269 REMARK 465 THR A 270 REMARK 465 ALA A 271 REMARK 465 PRO A 272 REMARK 465 VAL A 273 REMARK 465 HIS A 274 REMARK 465 ASP A 275 REMARK 465 GLU A 276 REMARK 465 SER A 277 REMARK 465 LEU A 278 REMARK 465 VAL A 279 REMARK 465 GLY A 280 REMARK 465 PRO A 281 REMARK 465 VAL A 282 REMARK 465 ASP A 283 REMARK 465 PRO A 284 REMARK 465 SER A 285 REMARK 465 SER A 286 REMARK 465 GLY A 287 REMARK 465 GLN A 288 REMARK 465 GLN A 289 REMARK 465 ASN A 330 REMARK 465 ALA A 331 REMARK 465 ILE A 332 REMARK 465 GLN A 333 REMARK 465 VAL A 334 REMARK 465 PHE A 335 REMARK 465 ASP A 336 REMARK 465 VAL A 337 REMARK 465 THR A 338 REMARK 465 ALA A 339 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 143 OG1 THR A 170 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 97 3.49 -69.43 REMARK 500 SER A 106 -73.88 -136.71 REMARK 500 ASN A 107 -113.12 48.22 REMARK 500 THR A 109 168.61 69.66 REMARK 500 ALA A 111 -117.41 54.77 REMARK 500 GLU A 113 70.87 -168.20 REMARK 500 MSE A 122 94.79 -25.95 REMARK 500 ASN A 124 -24.24 86.39 REMARK 500 PRO A 134 46.12 -83.38 REMARK 500 ASN A 157 -101.51 -122.44 REMARK 500 THR A 159 66.24 -60.82 REMARK 500 VAL A 185 -46.69 76.23 REMARK 500 GLN A 221 79.92 -165.08 REMARK 500 ASN A 234 110.89 -160.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7U01 RELATED DB: PDB REMARK 900 7U01 CONTAINS ONE DOMAIN OF THIS ONE DBREF 7U08 A 2 339 UNP Q12913 PTPRJ_HUMAN 37 374 SEQADV 7U08 MSE A 203 UNP Q12913 VAL 238 CONFLICT SEQRES 1 A 338 GLY GLY THR PRO SER PRO ILE PRO ASP PRO SER VAL ALA SEQRES 2 A 338 THR VAL ALA THR GLY GLU ASN GLY ILE THR GLN ILE SER SEQRES 3 A 338 SER THR ALA GLU SER PHE HIS LYS GLN ASN GLY THR GLY SEQRES 4 A 338 THR PRO GLN VAL GLU THR ASN THR SER GLU ASP GLY GLU SEQRES 5 A 338 SER SER GLY ALA ASN ASP SER LEU ARG THR PRO GLU GLN SEQRES 6 A 338 GLY SER ASN GLY THR ASP GLY ALA SER GLN LYS THR PRO SEQRES 7 A 338 SER SER THR GLY PRO SER PRO VAL PHE ASP ILE LYS ALA SEQRES 8 A 338 VAL SER ILE SER PRO THR ASN VAL ILE LEU THR TRP LYS SEQRES 9 A 338 SER ASN ASP THR ALA ALA SER GLU TYR LYS TYR VAL VAL SEQRES 10 A 338 LYS HIS LYS MSE GLU ASN GLU LYS THR ILE THR VAL VAL SEQRES 11 A 338 HIS GLN PRO TRP CYS ASN ILE THR GLY LEU ARG PRO ALA SEQRES 12 A 338 THR SER TYR VAL PHE SER ILE THR PRO GLY ILE GLY ASN SEQRES 13 A 338 GLU THR TRP GLY ASP PRO ARG VAL ILE LYS VAL ILE THR SEQRES 14 A 338 GLU PRO ILE PRO VAL SER ASP LEU ARG VAL ALA LEU THR SEQRES 15 A 338 GLY VAL ARG LYS ALA ALA LEU SER TRP SER ASN GLY ASN SEQRES 16 A 338 GLY THR ALA SER CYS ARG MSE LEU LEU GLU SER ILE GLY SEQRES 17 A 338 SER HIS GLU GLU LEU THR GLN ASP SER ARG LEU GLN VAL SEQRES 18 A 338 ASN ILE SER GLY LEU LYS PRO GLY VAL GLN TYR ASN ILE SEQRES 19 A 338 ASN PRO TYR LEU LEU GLN SER ASN LYS THR LYS GLY ASP SEQRES 20 A 338 PRO LEU GLY THR GLU GLY GLY LEU ASP ALA SER ASN THR SEQRES 21 A 338 GLU ARG SER ARG ALA GLY SER PRO THR ALA PRO VAL HIS SEQRES 22 A 338 ASP GLU SER LEU VAL GLY PRO VAL ASP PRO SER SER GLY SEQRES 23 A 338 GLN GLN SER ARG ASP THR GLU VAL LEU LEU VAL GLY LEU SEQRES 24 A 338 GLU PRO GLY THR ARG TYR ASN ALA THR VAL TYR SER GLN SEQRES 25 A 338 ALA ALA ASN GLY THR GLU GLY GLN PRO GLN ALA ILE GLU SEQRES 26 A 338 PHE ARG THR ASN ALA ILE GLN VAL PHE ASP VAL THR ALA MODRES 7U08 MSE A 122 MET MODIFIED RESIDUE HET MSE A 122 8 HET MSE A 203 8 HET PT A 401 1 HETNAM MSE SELENOMETHIONINE HETNAM PT PLATINUM (II) ION FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 PT PT 2+ HELIX 1 AA1 ASN A 236 SER A 242 1 7 SHEET 1 AA1 3 PHE A 88 SER A 94 0 SHEET 2 AA1 3 VAL A 100 LYS A 105 -1 O ILE A 101 N VAL A 93 SHEET 3 AA1 3 TRP A 135 ILE A 138 -1 O CYS A 136 N LEU A 102 SHEET 1 AA2 4 THR A 127 VAL A 131 0 SHEET 2 AA2 4 LYS A 115 HIS A 120 -1 N VAL A 118 O THR A 129 SHEET 3 AA2 4 SER A 146 GLY A 154 -1 O GLY A 154 N LYS A 115 SHEET 4 AA2 4 ARG A 164 ILE A 169 -1 O ILE A 166 N PHE A 149 SHEET 1 AA3 4 SER A 176 LEU A 182 0 SHEET 2 AA3 4 ALA A 188 SER A 193 -1 O ALA A 189 N ALA A 181 SHEET 3 AA3 4 ASP A 292 LEU A 297 -1 O LEU A 297 N ALA A 188 SHEET 4 AA3 4 GLN A 232 ILE A 235 1 N TYR A 233 O GLU A 294 SHEET 1 AA4 4 GLN A 221 LEU A 227 0 SHEET 2 AA4 4 SER A 200 ILE A 208 -1 N CYS A 201 O LEU A 227 SHEET 3 AA4 4 ARG A 305 GLN A 313 -1 O GLN A 313 N SER A 200 SHEET 4 AA4 4 GLN A 323 ARG A 328 -1 O PHE A 327 N TYR A 306 LINK C LYS A 121 N MSE A 122 1555 1555 1.33 LINK C MSE A 122 N GLU A 123 1555 1555 1.33 LINK C ARG A 202 N MSE A 203 1555 1555 1.33 LINK C MSE A 203 N LEU A 204 1555 1555 1.33 CRYST1 142.325 142.325 57.722 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007026 0.004057 0.000000 0.00000 SCALE2 0.000000 0.008113 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017324 0.00000