HEADER VIRAL PROTEIN/IMMUNE SYSTEM 23-FEB-22 7U2E TITLE CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN IN COMPLEX TITLE 2 WITH NEUTRALIZING ANTIBODY ADI-55688 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN, UNP RESIDUES 333-530; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ADI-55688 HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: ADI-55688 LIGHT CHAIN; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 20 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 10090 KEYWDS SARS-COV-2, CORONAVIRUS, ANTIBODY, SPIKE, RBD, IMMUNE SYSTEM, VIRAL KEYWDS 2 PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.YUAN,X.ZHU,I.A.WILSON REVDAT 3 25-OCT-23 7U2E 1 REMARK REVDAT 2 01-MAR-23 7U2E 1 JRNL REVDAT 1 04-MAY-22 7U2E 0 JRNL AUTH M.YUAN,X.ZHU,W.T.HE,P.ZHOU,C.I.KAKU,T.CAPOZZOLA,C.Y.ZHU, JRNL AUTH 2 X.YU,H.LIU,W.YU,Y.HUA,H.TIEN,L.PENG,G.SONG,C.A.COTTRELL, JRNL AUTH 3 W.R.SCHIEF,D.NEMAZEE,L.M.WALKER,R.ANDRABI,D.R.BURTON, JRNL AUTH 4 I.A.WILSON JRNL TITL A BROAD AND POTENT NEUTRALIZATION EPITOPE IN SARS-RELATED JRNL TITL 2 CORONAVIRUSES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 84119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 35767670 JRNL DOI 10.1073/PNAS.2205784119 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.YUAN,X.ZHU,W.T.HE,P.ZHOU,C.I.KAKU,T.CAPOZZOLA,C.Y.ZHU, REMARK 1 AUTH 2 X.YU,H.LIU,W.YU,Y.HUA,H.TIEN,L.PENG,G.SONG,C.A.COTTRELL, REMARK 1 AUTH 3 W.R.SCHIEF,D.NEMAZEE,L.M.WALKER,R.ANDRABI,D.R.BURTON, REMARK 1 AUTH 4 I.A.WILSON REMARK 1 TITL A BROAD AND POTENT NEUTRALIZATION EPITOPE IN SARS-RELATED REMARK 1 TITL 2 CORONAVIRUSES. REMARK 1 REF BIORXIV 2022 REMARK 1 REFN ISSN 2692-8205 REMARK 1 PMID 35313576 REMARK 1 DOI 10.1101/2022.03.13.484037 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 18821 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.254 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1700 - 6.7000 1.00 1354 145 0.2091 0.2511 REMARK 3 2 6.7000 - 5.3200 1.00 1313 146 0.2357 0.2305 REMARK 3 3 5.3200 - 4.6500 1.00 1327 141 0.2126 0.2209 REMARK 3 4 4.6500 - 4.2300 1.00 1321 145 0.2001 0.2197 REMARK 3 5 4.2200 - 3.9200 1.00 1292 144 0.2438 0.2719 REMARK 3 6 3.9200 - 3.6900 1.00 1298 144 0.2757 0.3159 REMARK 3 7 3.6900 - 3.5100 1.00 1296 147 0.2792 0.3669 REMARK 3 8 3.5000 - 3.3500 1.00 1328 153 0.3137 0.3576 REMARK 3 9 3.3500 - 3.2200 1.00 1285 142 0.3254 0.3587 REMARK 3 10 3.2200 - 3.1100 1.00 1298 147 0.3249 0.3622 REMARK 3 11 3.1100 - 3.0100 1.00 1312 143 0.3414 0.4051 REMARK 3 12 3.0100 - 2.9300 1.00 1275 143 0.3441 0.3367 REMARK 3 13 2.9300 - 2.8500 0.96 1240 142 0.3876 0.4069 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7U2E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000262679. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18846 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : 0.14500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 1.31800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7MF1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08 M SODIUM ACETATE, PH 3.8, 1.6 M REMARK 280 AMMONIUM SULFATE, AND 20% (V/V) GLYCEROL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.95450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 19.97725 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 59.93175 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -147.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 333 REMARK 465 LYS A 528 REMARK 465 LYS A 529 REMARK 465 SER A 530 REMARK 465 GLY A 531 REMARK 465 HIS A 532 REMARK 465 HIS A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 HIS A 536 REMARK 465 HIS A 537 REMARK 465 SER H 129 REMARK 465 SER H 130 REMARK 465 LYS H 131 REMARK 465 SER H 132 REMARK 465 THR H 133 REMARK 465 SER H 134 REMARK 465 GLY H 135 REMARK 465 CYS H 230 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 SER L 215 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 518 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 405 0.70 -68.11 REMARK 500 HIS H 99 30.53 -95.17 REMARK 500 ASP H 146 63.59 61.04 REMARK 500 SER L 51 -10.38 72.35 REMARK 500 VAL L 95B -62.21 -121.73 REMARK 500 LEU L 95C -110.18 55.44 REMARK 500 ASP L 151 -25.63 72.13 REMARK 500 SER L 152 0.05 -156.78 REMARK 500 ASN L 171 -1.82 69.34 REMARK 500 REMARK 500 REMARK: NULL DBREF 7U2E A 333 530 UNP P0DTC2 SPIKE_SARS2 333 530 DBREF 7U2E H 1 230 PDB 7U2E 7U2E 1 230 DBREF 7U2E L 1 215 PDB 7U2E 7U2E 1 215 SEQADV 7U2E GLY A 531 UNP P0DTC2 EXPRESSION TAG SEQADV 7U2E HIS A 532 UNP P0DTC2 EXPRESSION TAG SEQADV 7U2E HIS A 533 UNP P0DTC2 EXPRESSION TAG SEQADV 7U2E HIS A 534 UNP P0DTC2 EXPRESSION TAG SEQADV 7U2E HIS A 535 UNP P0DTC2 EXPRESSION TAG SEQADV 7U2E HIS A 536 UNP P0DTC2 EXPRESSION TAG SEQADV 7U2E HIS A 537 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 205 THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR SEQRES 2 A 205 ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SEQRES 3 A 205 SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER SEQRES 4 A 205 ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER PRO SEQRES 5 A 205 THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA SEQRES 6 A 205 ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE SEQRES 7 A 205 ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN TYR SEQRES 8 A 205 LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP SEQRES 9 A 205 ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN TYR SEQRES 10 A 205 ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU LYS SEQRES 11 A 205 PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA SEQRES 12 A 205 GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS SEQRES 13 A 205 TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR ASN SEQRES 14 A 205 GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 15 A 205 PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 16 A 205 LYS LYS SER GLY HIS HIS HIS HIS HIS HIS SEQRES 1 H 227 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 227 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 227 PHE THR PHE SER SER TYR TYR MET ASN TRP VAL ARG GLN SEQRES 4 H 227 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER SER ILE SER SEQRES 5 H 227 SER ASP GLY TYR ASN THR TYR TYR PRO ASP SER LEU LYS SEQRES 6 H 227 GLY ARG PHE THR ILE SER ARG ASP SER ALA LYS ASN SER SEQRES 7 H 227 LEU TYR LEU GLN MET ASN SER LEU ARG ALA ASP ASP THR SEQRES 8 H 227 ALA VAL TYR TYR CYS ALA ARG ASP PHE SER GLY HIS THR SEQRES 9 H 227 ALA VAL ALA GLY THR GLY PHE GLU TYR TRP GLY GLN GLY SEQRES 10 H 227 THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 H 227 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 H 227 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 H 227 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 H 227 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 H 227 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 H 227 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 H 227 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS SEQRES 18 H 227 VAL GLU PRO LYS SER CYS SEQRES 1 L 218 GLN PRO VAL LEU THR GLN PRO PRO SER VAL SER GLY ALA SEQRES 2 L 218 PRO GLY GLN ARG ILE THR ILE SER CYS THR GLY SER SER SEQRES 3 L 218 SER ASN ILE GLY ALA GLY TYR ASP VAL HIS TRP TYR GLN SEQRES 4 L 218 GLN LEU PRO GLY THR ALA PRO LYS LEU LEU ILE TYR GLY SEQRES 5 L 218 SER SER SER ARG PRO SER GLY VAL PRO ASP ARG PHE SER SEQRES 6 L 218 GLY SER LYS SER GLY THR SER ALA SER LEU ALA ILE THR SEQRES 7 L 218 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS GLN SEQRES 8 L 218 SER TYR ASP SER SER LEU SER VAL LEU TYR VAL PHE GLY SEQRES 9 L 218 THR GLY THR LYS VAL THR VAL LEU GLY GLN PRO LYS ALA SEQRES 10 L 218 ALA PRO SER VAL THR LEU PHE PRO PRO SER SER GLU GLU SEQRES 11 L 218 LEU GLN ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER SEQRES 12 L 218 ASP PHE TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA SEQRES 13 L 218 ASP SER SER PRO VAL LYS ALA GLY VAL GLU THR THR THR SEQRES 14 L 218 PRO SER LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER SEQRES 15 L 218 TYR LEU SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SEQRES 16 L 218 SER TYR SER CYS GLN VAL THR HIS GLU GLY SER THR VAL SEQRES 17 L 218 GLU LYS THR VAL ALA PRO THR GLU CYS SER HET NAG A 601 14 HET SO4 A 602 5 HET SO4 H 301 5 HET SO4 H 302 5 HET SO4 H 303 5 HET SO4 H 304 5 HET SO4 H 305 5 HET SO4 L 301 5 HET SO4 L 302 5 HET SO4 L 303 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG C8 H15 N O6 FORMUL 5 SO4 9(O4 S 2-) HELIX 1 AA1 PHE A 338 ASN A 343 1 6 HELIX 2 AA2 TYR A 365 ASN A 370 1 6 HELIX 3 AA3 THR A 385 LEU A 390 5 6 HELIX 4 AA4 ASP A 405 ILE A 410 5 6 HELIX 5 AA5 GLY A 416 ASN A 422 1 7 HELIX 6 AA6 SER A 438 SER A 443 1 6 HELIX 7 AA7 THR H 28 TYR H 32 5 5 HELIX 8 AA8 PRO H 60 LYS H 64 5 5 HELIX 9 AA9 ARG H 83 THR H 87 5 5 HELIX 10 AB1 SER H 163 ALA H 165 5 3 HELIX 11 AB2 SER H 196 THR H 200 5 5 HELIX 12 AB3 LYS H 213 ASN H 216 5 4 HELIX 13 AB4 GLN L 79 GLU L 83 5 5 HELIX 14 AB5 SER L 121 ALA L 127 1 7 HELIX 15 AB6 THR L 182 HIS L 189 1 8 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 VAL A 395 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 5 PRO A 507 PHE A 515 -1 O VAL A 510 N PHE A 400 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N TRP A 436 O ARG A 509 SHEET 5 AA1 5 THR A 376 TYR A 380 -1 N TYR A 380 O GLY A 431 SHEET 1 AA2 2 CYS A 361 VAL A 362 0 SHEET 2 AA2 2 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 1 AA3 2 LEU A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA5 4 GLN H 3 SER H 7 0 SHEET 2 AA5 4 LEU H 18 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 AA5 4 SER H 77 MET H 82 -1 O LEU H 80 N LEU H 20 SHEET 4 AA5 4 PHE H 67 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AA6 6 LEU H 11 VAL H 12 0 SHEET 2 AA6 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA6 6 ALA H 88 ARG H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 AA6 6 MET H 34 GLN H 39 -1 N GLN H 39 O VAL H 89 SHEET 5 AA6 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA6 6 THR H 57 TYR H 58 -1 O TYR H 58 N SER H 50 SHEET 1 AA7 4 LEU H 11 VAL H 12 0 SHEET 2 AA7 4 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA7 4 ALA H 88 ARG H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 AA7 4 TYR H 102 TRP H 103 -1 O TYR H 102 N ARG H 94 SHEET 1 AA8 4 SER H 120 LEU H 124 0 SHEET 2 AA8 4 THR H 137 TYR H 147 -1 O GLY H 141 N LEU H 124 SHEET 3 AA8 4 TYR H 185 PRO H 194 -1 O TYR H 185 N TYR H 147 SHEET 4 AA8 4 VAL H 171 THR H 173 -1 N HIS H 172 O VAL H 190 SHEET 1 AA9 4 SER H 120 LEU H 124 0 SHEET 2 AA9 4 THR H 137 TYR H 147 -1 O GLY H 141 N LEU H 124 SHEET 3 AA9 4 TYR H 185 PRO H 194 -1 O TYR H 185 N TYR H 147 SHEET 4 AA9 4 VAL H 177 LEU H 178 -1 N VAL H 177 O SER H 186 SHEET 1 AB1 3 THR H 153 TRP H 157 0 SHEET 2 AB1 3 ILE H 207 HIS H 212 -1 O ASN H 209 N SER H 156 SHEET 3 AB1 3 THR H 217 LYS H 222 -1 O THR H 217 N HIS H 212 SHEET 1 AB2 5 SER L 9 GLY L 13 0 SHEET 2 AB2 5 THR L 102 VAL L 106 1 O LYS L 103 N VAL L 11 SHEET 3 AB2 5 ALA L 84 TYR L 91 -1 N ALA L 84 O VAL L 104 SHEET 4 AB2 5 HIS L 34 GLN L 38 -1 N GLN L 38 O ASP L 85 SHEET 5 AB2 5 LYS L 45 ILE L 48 -1 O LEU L 47 N TRP L 35 SHEET 1 AB3 4 SER L 9 GLY L 13 0 SHEET 2 AB3 4 THR L 102 VAL L 106 1 O LYS L 103 N VAL L 11 SHEET 3 AB3 4 ALA L 84 TYR L 91 -1 N ALA L 84 O VAL L 104 SHEET 4 AB3 4 TYR L 96 PHE L 98 -1 O VAL L 97 N SER L 90 SHEET 1 AB4 3 ARG L 18 THR L 24 0 SHEET 2 AB4 3 SER L 70 THR L 76 -1 O ILE L 75 N ILE L 19 SHEET 3 AB4 3 PHE L 62 SER L 67 -1 N SER L 67 O SER L 70 SHEET 1 AB5 4 SER L 114 PHE L 118 0 SHEET 2 AB5 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 AB5 4 TYR L 173 LEU L 181 -1 O ALA L 175 N ILE L 136 SHEET 4 AB5 4 VAL L 159 THR L 161 -1 N GLU L 160 O TYR L 178 SHEET 1 AB6 4 SER L 114 PHE L 118 0 SHEET 2 AB6 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 AB6 4 TYR L 173 LEU L 181 -1 O ALA L 175 N ILE L 136 SHEET 4 AB6 4 SER L 165 LYS L 166 -1 N SER L 165 O ALA L 174 SHEET 1 AB7 3 THR L 145 LYS L 149 0 SHEET 2 AB7 3 TYR L 192 HIS L 198 -1 O GLN L 195 N ALA L 147 SHEET 3 AB7 3 SER L 203 VAL L 209 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.03 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.03 SSBOND 3 CYS A 391 CYS A 525 1555 1555 2.03 SSBOND 4 CYS A 480 CYS A 488 1555 1555 2.03 SSBOND 5 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 6 CYS H 142 CYS H 208 1555 1555 2.04 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 8 CYS L 134 CYS L 194 1555 1555 2.04 LINK ND2 ASN A 343 C1 NAG A 601 1555 1555 1.44 CISPEP 1 PHE H 148 PRO H 149 0 -3.81 CISPEP 2 GLU H 150 PRO H 151 0 -3.88 CISPEP 3 GLN L 1 PRO L 2 0 -17.01 CISPEP 4 TYR L 140 PRO L 141 0 -0.79 CRYST1 101.006 101.006 79.909 90.00 90.00 90.00 P 41 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009900 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009900 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012514 0.00000