HEADER PEPTIDE BINDING PROTEIN/INHIBITOR 27-FEB-22 7U3E TITLE GID4 IN COMPLEX WITH COMPOUND 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-INDUCED DEGRADATION PROTEIN 4 HOMOLOG; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 HOMOLOG; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GID4, C17ORF39, VID24; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS COMPLEX, INHIBITOR, PROTEIN DEGRADATION, PEPTIDE BINDING PROTEIN, KEYWDS 2 PEPTIDE BINDING PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.K.CHANA,F.SICHERI REVDAT 3 18-OCT-23 7U3E 1 REMARK REVDAT 2 26-OCT-22 7U3E 1 JRNL REVDAT 1 05-OCT-22 7U3E 0 JRNL AUTH C.K.CHANA,P.MAISONNEUVE,G.POSTERNAK,N.G.A.GRINBERG, JRNL AUTH 2 J.POIRSON,S.M.ONA,D.F.CECCARELLI,P.MADER,D.J.ST-CYR,V.PAU, JRNL AUTH 3 I.KURINOV,X.TANG,D.DENG,W.CUI,W.SU,L.KUAI,R.SOLL,M.TYERS, JRNL AUTH 4 H.L.ROST,R.A.BATEY,M.TAIPALE,A.C.GINGRAS,F.SICHERI JRNL TITL DISCOVERY AND STRUCTURAL CHARACTERIZATION OF SMALL MOLECULE JRNL TITL 2 BINDERS OF THE HUMAN CTLH E3 LIGASE SUBUNIT GID4. JRNL REF J.MED.CHEM. V. 65 12725 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 36117290 JRNL DOI 10.1021/ACS.JMEDCHEM.2C00509 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16-3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 23539 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 66.4780 - 3.7035 0.99 2974 154 0.1841 0.2100 REMARK 3 2 3.7035 - 2.9396 0.99 2921 128 0.1956 0.2217 REMARK 3 3 2.9396 - 2.5680 1.00 2867 159 0.2094 0.2443 REMARK 3 4 2.5680 - 2.3332 0.99 2859 134 0.2173 0.2496 REMARK 3 5 2.3332 - 2.1659 0.99 2880 141 0.2131 0.2570 REMARK 3 6 2.1659 - 2.0382 1.00 2860 164 0.2325 0.2701 REMARK 3 7 2.0382 - 1.9361 0.97 2802 139 0.2597 0.3111 REMARK 3 8 1.9361 - 1.8520 0.78 2231 126 0.2957 0.3015 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7925 5.0601 -32.2149 REMARK 3 T TENSOR REMARK 3 T11: 0.3138 T22: 0.1930 REMARK 3 T33: 0.2122 T12: -0.0018 REMARK 3 T13: 0.0240 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 4.4478 L22: 3.8232 REMARK 3 L33: 1.9329 L12: 2.5909 REMARK 3 L13: 1.7262 L23: 1.7936 REMARK 3 S TENSOR REMARK 3 S11: 0.0467 S12: 0.0194 S13: 0.2886 REMARK 3 S21: 0.1058 S22: -0.1243 S23: 0.2214 REMARK 3 S31: 0.0436 S32: 0.0055 S33: 0.1011 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0071 0.8305 -24.3976 REMARK 3 T TENSOR REMARK 3 T11: 0.4015 T22: 0.2237 REMARK 3 T33: 0.2784 T12: -0.0188 REMARK 3 T13: -0.0335 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 3.1231 L22: 3.6434 REMARK 3 L33: 3.3817 L12: 0.4309 REMARK 3 L13: 0.2445 L23: 0.9041 REMARK 3 S TENSOR REMARK 3 S11: -0.0827 S12: -0.3593 S13: -0.0448 REMARK 3 S21: 0.4124 S22: 0.1041 S23: -0.4793 REMARK 3 S31: 0.1230 S32: 0.1411 S33: -0.0605 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3952 0.6575 -27.5153 REMARK 3 T TENSOR REMARK 3 T11: 0.3598 T22: 0.2361 REMARK 3 T33: 0.2730 T12: -0.0330 REMARK 3 T13: -0.0060 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 4.2584 L22: 1.8019 REMARK 3 L33: 2.8179 L12: -0.9957 REMARK 3 L13: -1.6568 L23: 0.9923 REMARK 3 S TENSOR REMARK 3 S11: -0.0791 S12: -0.0426 S13: -0.0927 REMARK 3 S21: 0.2422 S22: -0.0216 S23: 0.1468 REMARK 3 S31: 0.3664 S32: -0.0729 S33: 0.0890 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 124 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8639 -6.4820 -67.9718 REMARK 3 T TENSOR REMARK 3 T11: 0.3211 T22: 0.3403 REMARK 3 T33: 0.2292 T12: -0.0673 REMARK 3 T13: 0.0350 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 3.5697 L22: 6.8578 REMARK 3 L33: 2.3950 L12: 1.1182 REMARK 3 L13: -0.2005 L23: -0.7288 REMARK 3 S TENSOR REMARK 3 S11: 0.2310 S12: 0.2685 S13: -0.4127 REMARK 3 S21: -0.0598 S22: -0.2168 S23: -0.9794 REMARK 3 S31: -0.0126 S32: 0.5198 S33: -0.0513 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 150 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3492 -6.2465 -57.0027 REMARK 3 T TENSOR REMARK 3 T11: 0.2950 T22: 0.2563 REMARK 3 T33: 0.1913 T12: -0.0117 REMARK 3 T13: -0.0132 T23: 0.0615 REMARK 3 L TENSOR REMARK 3 L11: 3.4872 L22: 3.3602 REMARK 3 L33: 2.4740 L12: 0.0320 REMARK 3 L13: -0.1495 L23: 0.3294 REMARK 3 S TENSOR REMARK 3 S11: -0.1457 S12: 0.0222 S13: 0.0374 REMARK 3 S21: 0.0841 S22: 0.0011 S23: -0.1788 REMARK 3 S31: -0.0545 S32: 0.2954 S33: 0.1351 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 205 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4274 -0.2719 -60.0852 REMARK 3 T TENSOR REMARK 3 T11: 0.2726 T22: 0.3022 REMARK 3 T33: 0.3711 T12: 0.0342 REMARK 3 T13: 0.0606 T23: 0.0274 REMARK 3 L TENSOR REMARK 3 L11: 4.4759 L22: 5.4417 REMARK 3 L33: 2.9342 L12: 3.4003 REMARK 3 L13: -0.7953 L23: -1.6364 REMARK 3 S TENSOR REMARK 3 S11: 0.1475 S12: -0.3247 S13: -0.6992 REMARK 3 S21: 0.4859 S22: -0.2432 S23: 0.5375 REMARK 3 S31: -0.6614 S32: -0.3140 S33: 0.1629 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 222 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2871 -3.7662 -61.1821 REMARK 3 T TENSOR REMARK 3 T11: 0.2913 T22: 0.2664 REMARK 3 T33: 0.1990 T12: -0.0344 REMARK 3 T13: 0.0167 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 3.9250 L22: 2.7980 REMARK 3 L33: 2.3934 L12: -0.4829 REMARK 3 L13: 0.9642 L23: -0.0627 REMARK 3 S TENSOR REMARK 3 S11: 0.0551 S12: -0.0519 S13: 0.0865 REMARK 3 S21: -0.0534 S22: -0.0581 S23: -0.2209 REMARK 3 S31: -0.3178 S32: 0.2700 S33: 0.0226 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND ((RESID 126 THROUGH 127 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 128 THROUGH 132 OR REMARK 3 (RESID 133 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 134 OR REMARK 3 (RESID 135 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 CD )) OR RESID 136 THROUGH 145 OR RESID REMARK 3 147 THROUGH 161 OR (RESID 162 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 163 THROUGH 182 OR (RESID 183 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG OR NAME CD )) OR REMARK 3 RESID 184 THROUGH 212 OR RESID 219 REMARK 3 THROUGH 223 OR (RESID 224 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 225 THROUGH 242 OR (RESID 243 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR (RESID 248 THROUGH 250 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 251 THROUGH 277 REMARK 3 OR (RESID 278 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 279 THROUGH 289 OR RESID 301)) REMARK 3 SELECTION : (CHAIN B AND ((RESID 126 THROUGH 127 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 128 THROUGH 141 OR REMARK 3 (RESID 142 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 143 OR REMARK 3 (RESID 144 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 145 OR REMARK 3 RESID 147 THROUGH 164 OR (RESID 165 REMARK 3 THROUGH 166 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 167 THROUGH 188 OR (RESID 189 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 190 THROUGH 195 OR (RESID 196 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 197 THROUGH 199 REMARK 3 OR (RESID 200 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 201 THROUGH 212 OR (RESID 219 THROUGH 221 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 222 THROUGH 225 REMARK 3 OR (RESID 226 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 227 THROUGH 275 OR (RESID 276 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 OR NAME CG )) OR RESID 277 THROUGH 289 OR REMARK 3 RESID 301)) REMARK 3 ATOM PAIRS NUMBER : 1315 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7U3E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000263190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20190315 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23568 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 66.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.86600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 6CCR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG3350, 0.1 M BIS-TRIS, 0.2 M REMARK 280 AMMONIUM ACETATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.89250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 123 REMARK 465 SER A 124 REMARK 465 GLY A 125 REMARK 465 PHE A 215 REMARK 465 ASN A 216 REMARK 465 SER A 217 REMARK 465 ASP A 218 REMARK 465 GLY B 123 REMARK 465 LYS B 213 REMARK 465 SER B 214 REMARK 465 PHE B 215 REMARK 465 ASN B 216 REMARK 465 SER B 217 REMARK 465 HIS B 244 REMARK 465 THR B 245 REMARK 465 ILE B 246 REMARK 465 LYS B 247 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 126 OG REMARK 470 LYS A 127 CD CE NZ REMARK 470 ARG A 129 CD NE CZ NH1 NH2 REMARK 470 GLU A 142 CG CD OE1 OE2 REMARK 470 VAL A 144 CG1 CG2 REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 THR A 165 OG1 CG2 REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 GLU A 167 CD OE1 OE2 REMARK 470 ARG A 189 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 195 CG CD OE1 OE2 REMARK 470 ASP A 196 CG OD1 OD2 REMARK 470 ARG A 199 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 200 CG CD CE NZ REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 ASP A 219 CG OD1 OD2 REMARK 470 PHE A 220 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 221 CG OD1 OD2 REMARK 470 GLU A 223 CG CD OE1 OE2 REMARK 470 LYS A 226 CG CD CE NZ REMARK 470 LYS A 247 CG CD CE NZ REMARK 470 ASP A 248 CG OD1 OD2 REMARK 470 SER A 250 OG REMARK 470 ARG A 276 CD NE CZ NH1 NH2 REMARK 470 SER A 277 OG REMARK 470 LYS B 127 CG CD CE NZ REMARK 470 ARG B 129 CD NE CZ NH1 NH2 REMARK 470 LYS B 133 CG CD CE NZ REMARK 470 LYS B 135 CE NZ REMARK 470 LYS B 162 CG CD CE NZ REMARK 470 GLU B 167 CD OE1 OE2 REMARK 470 LYS B 183 CE NZ REMARK 470 GLU B 195 CG CD OE1 OE2 REMARK 470 ARG B 199 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 200 CD CE NZ REMARK 470 ASP B 218 CG OD1 OD2 REMARK 470 ASP B 219 CG OD1 OD2 REMARK 470 GLU B 223 CG CD OE1 OE2 REMARK 470 GLU B 224 CG CD OE1 OE2 REMARK 470 LYS B 226 CD CE NZ REMARK 470 ASP B 243 CG OD1 OD2 REMARK 470 ASP B 248 CG OD1 OD2 REMARK 470 ILE B 249 CG1 CG2 CD1 REMARK 470 SER B 250 OG REMARK 470 SER B 277 OG REMARK 470 SER B 278 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 134 118.92 -161.33 REMARK 500 SER A 181 -175.58 -172.20 REMARK 500 LYS A 190 -176.40 -170.88 REMARK 500 SER B 134 117.16 -162.09 REMARK 500 SER B 181 -175.11 -171.66 REMARK 500 LYS B 190 -177.92 -170.79 REMARK 500 ASP B 219 49.04 -95.70 REMARK 500 REMARK 500 REMARK: NULL DBREF 7U3E A 124 289 UNP Q8IVV7 GID4_HUMAN 124 289 DBREF 7U3E B 124 289 UNP Q8IVV7 GID4_HUMAN 124 289 SEQADV 7U3E GLY A 123 UNP Q8IVV7 EXPRESSION TAG SEQADV 7U3E GLY B 123 UNP Q8IVV7 EXPRESSION TAG SEQRES 1 A 167 GLY SER GLY SER LYS PHE ARG GLY HIS GLN LYS SER LYS SEQRES 2 A 167 GLY ASN SER TYR ASP VAL GLU VAL VAL LEU GLN HIS VAL SEQRES 3 A 167 ASP THR GLY ASN SER TYR LEU CYS GLY TYR LEU LYS ILE SEQRES 4 A 167 LYS GLY LEU THR GLU GLU TYR PRO THR LEU THR THR PHE SEQRES 5 A 167 PHE GLU GLY GLU ILE ILE SER LYS LYS HIS PRO PHE LEU SEQRES 6 A 167 THR ARG LYS TRP ASP ALA ASP GLU ASP VAL ASP ARG LYS SEQRES 7 A 167 HIS TRP GLY LYS PHE LEU ALA PHE TYR GLN TYR ALA LYS SEQRES 8 A 167 SER PHE ASN SER ASP ASP PHE ASP TYR GLU GLU LEU LYS SEQRES 9 A 167 ASN GLY ASP TYR VAL PHE MET ARG TRP LYS GLU GLN PHE SEQRES 10 A 167 LEU VAL PRO ASP HIS THR ILE LYS ASP ILE SER GLY ALA SEQRES 11 A 167 SER PHE ALA GLY PHE TYR TYR ILE CYS PHE GLN LYS SER SEQRES 12 A 167 ALA ALA SER ILE GLU GLY TYR TYR TYR HIS ARG SER SER SEQRES 13 A 167 GLU TRP TYR GLN SER LEU ASN LEU THR HIS VAL SEQRES 1 B 167 GLY SER GLY SER LYS PHE ARG GLY HIS GLN LYS SER LYS SEQRES 2 B 167 GLY ASN SER TYR ASP VAL GLU VAL VAL LEU GLN HIS VAL SEQRES 3 B 167 ASP THR GLY ASN SER TYR LEU CYS GLY TYR LEU LYS ILE SEQRES 4 B 167 LYS GLY LEU THR GLU GLU TYR PRO THR LEU THR THR PHE SEQRES 5 B 167 PHE GLU GLY GLU ILE ILE SER LYS LYS HIS PRO PHE LEU SEQRES 6 B 167 THR ARG LYS TRP ASP ALA ASP GLU ASP VAL ASP ARG LYS SEQRES 7 B 167 HIS TRP GLY LYS PHE LEU ALA PHE TYR GLN TYR ALA LYS SEQRES 8 B 167 SER PHE ASN SER ASP ASP PHE ASP TYR GLU GLU LEU LYS SEQRES 9 B 167 ASN GLY ASP TYR VAL PHE MET ARG TRP LYS GLU GLN PHE SEQRES 10 B 167 LEU VAL PRO ASP HIS THR ILE LYS ASP ILE SER GLY ALA SEQRES 11 B 167 SER PHE ALA GLY PHE TYR TYR ILE CYS PHE GLN LYS SER SEQRES 12 B 167 ALA ALA SER ILE GLU GLY TYR TYR TYR HIS ARG SER SER SEQRES 13 B 167 GLU TRP TYR GLN SER LEU ASN LEU THR HIS VAL HET L4O A 301 14 HET L4O B 301 14 HETNAM L4O TERT-BUTYL (1S,4S)-2,5-DIAZABICYCLO[2.2.1]HEPTANE-2- HETNAM 2 L4O CARBOXYLATE FORMUL 3 L4O 2(C10 H18 N2 O2) FORMUL 5 HOH *81(H2 O) HELIX 1 AA1 THR A 150 ASN A 152 5 3 HELIX 2 AA2 ASP A 194 GLY A 203 1 10 HELIX 3 AA3 LYS A 204 TYR A 211 5 8 HELIX 4 AA4 ASP A 221 GLY A 228 1 8 HELIX 5 AA5 ASP B 194 GLY B 203 1 10 HELIX 6 AA6 LYS B 204 TYR B 211 5 8 HELIX 7 AA7 ASP B 221 LYS B 226 1 6 SHEET 1 AA1 9 LYS A 127 SER A 134 0 SHEET 2 AA1 9 ASN A 137 ASP A 149 -1 O VAL A 143 N PHE A 128 SHEET 3 AA1 9 TYR A 154 LYS A 162 -1 O TYR A 154 N ASP A 149 SHEET 4 AA1 9 THR A 170 ILE A 179 -1 O GLY A 177 N LEU A 155 SHEET 5 AA1 9 TYR A 230 VAL A 241 -1 O GLN A 238 N PHE A 174 SHEET 6 AA1 9 PHE A 257 GLN A 263 -1 O PHE A 262 N VAL A 231 SHEET 7 AA1 9 SER A 268 TYR A 274 -1 O GLU A 270 N CYS A 261 SHEET 8 AA1 9 GLN A 282 HIS A 288 -1 O LEU A 286 N ILE A 269 SHEET 9 AA1 9 LYS A 127 SER A 134 -1 N LYS A 133 O SER A 283 SHEET 1 AA2 9 LYS B 127 SER B 134 0 SHEET 2 AA2 9 ASN B 137 ASP B 149 -1 O VAL B 143 N PHE B 128 SHEET 3 AA2 9 TYR B 154 LYS B 162 -1 O TYR B 154 N ASP B 149 SHEET 4 AA2 9 THR B 170 ILE B 179 -1 O GLY B 177 N LEU B 155 SHEET 5 AA2 9 TYR B 230 LEU B 240 -1 O GLN B 238 N PHE B 174 SHEET 6 AA2 9 PHE B 257 GLN B 263 -1 O ILE B 260 N MET B 233 SHEET 7 AA2 9 SER B 268 TYR B 274 -1 O TYR B 274 N PHE B 257 SHEET 8 AA2 9 GLN B 282 HIS B 288 -1 O LEU B 286 N ILE B 269 SHEET 9 AA2 9 LYS B 127 SER B 134 -1 N LYS B 133 O SER B 283 CISPEP 1 VAL A 241 PRO A 242 0 8.42 CISPEP 2 VAL B 241 PRO B 242 0 1.82 CRYST1 54.115 39.785 66.722 90.00 94.91 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018479 0.000000 0.001586 0.00000 SCALE2 0.000000 0.025135 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015043 0.00000