data_7U3S # _entry.id 7U3S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7U3S pdb_00007u3s 10.2210/pdb7u3s/pdb WWPDB D_1000263280 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Unmodified triangle' _pdbx_database_related.db_id 3GBI _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7U3S _pdbx_database_status.recvd_initial_deposition_date 2022-02-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Woloszyn, K.' 1 0000-0003-1200-583X 'Vecchioni, S.' 2 0000-0001-8243-650X 'Seeman, N.C.' 3 0000-0002-9680-4649 'Sha, R.' 4 0000-0002-0807-734X 'Ohayon, Y.P.' 5 0000-0001-7500-4282 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Adv Mater' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1521-4095 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 34 _citation.language ? _citation.page_first e2206876 _citation.page_last e2206876 _citation.title 'Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/adma.202206876 _citation.pdbx_database_id_PubMed 36100349 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Woloszyn, K.' 1 ? primary 'Vecchioni, S.' 2 ? primary 'Ohayon, Y.P.' 3 ? primary 'Lu, B.' 4 ? primary 'Ma, Y.' 5 ? primary 'Huang, Q.' 6 ? primary 'Zhu, E.' 7 ? primary 'Chernovolenko, D.' 8 ? primary 'Markus, T.' 9 ? primary 'Jonoska, N.' 10 ? primary 'Mao, C.' 11 ? primary 'Seeman, N.C.' 12 ? primary 'Sha, R.' 13 0000-0002-0807-734X # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7U3S _cell.details ? _cell.formula_units_Z ? _cell.length_a 212.728 _cell.length_a_esd ? _cell.length_b 212.728 _cell.length_b_esd ? _cell.length_c 174.799 _cell.length_c_esd ? _cell.volume 6850446.666 _cell.volume_esd ? _cell.Z_PDB 9 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U3S _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'H 3' _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3') ; 2082.400 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*TP*CP*TP*GP*AP*TP*GP*T)-3') ; 2432.614 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3') ; 6457.188 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*GP*GP*CP*TP*GP*C)-3') ; 1825.216 1 ? ? ? ? 5 polymer syn ;DNA (5'-D(P*GP*AP*TP*GP*CP*TP*GP*AP*CP*GP*TP*AP*GP*TP*AP*GP*CP*AP*GP*AP*G)-3') ; 6552.247 1 ? ? ? ? 6 polymer syn ;DNA (5'-D(P*TP*CP*CP*TP*CP*TP*GP*CP*TP*AP*CP*TP*AP*CP*GP*TP*CP*AP*GP*CP*A)-3') ; 6334.098 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DT)(DA)(DC)(DA)' CCGTACA B ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DG)(DA)(DT)(DG)(DT)' TCTGATGT C ? 3 polydeoxyribonucleotide no no ;(DG)(DA)(DG)(DC)(DA)(DG)(DC)(DC)(DT)(DG)(DT)(DA)(DC)(DG)(DG)(DA)(DC)(DA)(DT)(DC) (DA) ; GAGCAGCCTGTACGGACATCA A ? 4 polydeoxyribonucleotide no no '(DG)(DG)(DC)(DT)(DG)(DC)' GGCTGC D ? 5 polydeoxyribonucleotide no no ;(DG)(DA)(DT)(DG)(DC)(DT)(DG)(DA)(DC)(DG)(DT)(DA)(DG)(DT)(DA)(DG)(DC)(DA)(DG)(DA) (DG) ; GATGCTGACGTAGTAGCAGAG X ? 6 polydeoxyribonucleotide no no ;(DT)(DC)(DC)(DT)(DC)(DT)(DG)(DC)(DT)(DA)(DC)(DT)(DA)(DC)(DG)(DT)(DC)(DA)(DG)(DC) (DA) ; TCCTCTGCTACTACGTCAGCA Y ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DT n 1 5 DA n 1 6 DC n 1 7 DA n 2 1 DT n 2 2 DC n 2 3 DT n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DG n 2 8 DT n 3 1 DG n 3 2 DA n 3 3 DG n 3 4 DC n 3 5 DA n 3 6 DG n 3 7 DC n 3 8 DC n 3 9 DT n 3 10 DG n 3 11 DT n 3 12 DA n 3 13 DC n 3 14 DG n 3 15 DG n 3 16 DA n 3 17 DC n 3 18 DA n 3 19 DT n 3 20 DC n 3 21 DA n 4 1 DG n 4 2 DG n 4 3 DC n 4 4 DT n 4 5 DG n 4 6 DC n 5 1 DG n 5 2 DA n 5 3 DT n 5 4 DG n 5 5 DC n 5 6 DT n 5 7 DG n 5 8 DA n 5 9 DC n 5 10 DG n 5 11 DT n 5 12 DA n 5 13 DG n 5 14 DT n 5 15 DA n 5 16 DG n 5 17 DC n 5 18 DA n 5 19 DG n 5 20 DA n 5 21 DG n 6 1 DT n 6 2 DC n 6 3 DC n 6 4 DT n 6 5 DC n 6 6 DT n 6 7 DG n 6 8 DC n 6 9 DT n 6 10 DA n 6 11 DC n 6 12 DT n 6 13 DA n 6 14 DC n 6 15 DG n 6 16 DT n 6 17 DC n 6 18 DA n 6 19 DG n 6 20 DC n 6 21 DA n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 7 'synthetic construct' ? 32630 ? 2 1 sample 1 8 'synthetic construct' ? 32630 ? 3 1 sample 1 21 'synthetic construct' ? 32630 ? 4 1 sample 1 6 'synthetic construct' ? 32630 ? 5 1 sample 1 21 'synthetic construct' ? 32630 ? 6 1 sample 1 21 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7U3S 7U3S ? 1 ? 1 2 PDB 7U3S 7U3S ? 2 ? 1 3 PDB 7U3S 7U3S ? 3 ? 1 4 PDB 7U3S 7U3S ? 4 ? 1 5 PDB 7U3S 7U3S ? 5 ? 1 6 PDB 7U3S 7U3S ? 6 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7U3S B 1 ? 7 ? 7U3S 130 ? 136 ? 130 136 2 2 7U3S C 1 ? 8 ? 7U3S 122 ? 129 ? 122 129 3 3 7U3S A 1 ? 21 ? 7U3S 101 ? 121 ? 101 121 4 4 7U3S D 1 ? 6 ? 7U3S 137 ? 142 ? 137 142 5 5 7U3S X 1 ? 21 ? 7U3S 122 ? 142 ? 122 142 6 6 7U3S Y 1 ? 21 ? 7U3S 101 ? 121 ? 101 121 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7U3S _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 29.64 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 95.85 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details '338K to 293K at 0.4K/hr, 293K to 277K at 0.1K/hr' _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MOPS, 125 mM magnesium sulfate, sodium hydroxide' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-02-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00743 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00743 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 878.08 _reflns.entry_id 7U3S _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 9.110 _reflns.d_resolution_low 81.491 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 1413 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 83.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 9.110 10.635 ? ? ? ? ? ? 201 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 11.7 ? ? ? ? ? ? ? 1 1 0.088 ? ? ? ? ? ? ? ? ? ? 19.983 81.491 ? ? ? ? ? ? 202 99.5 ? ? ? ? ? ? ? ? ? ? ? ? ? 11.3 ? ? ? ? ? ? ? 2 1 0.999 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 798.48 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7U3S _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 9.50 _refine.ls_d_res_low 37.01 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 1344 _refine.ls_number_reflns_R_free 53 _refine.ls_number_reflns_R_work 1291 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 73.28 _refine.ls_percent_reflns_R_free 3.94 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1861 _refine.ls_R_factor_R_free 0.1895 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1860 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.96 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 3GBI' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 37.3145 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 9.50 _refine_hist.d_res_low 37.01 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1722 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1722 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0109 ? 1926 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.1529 ? 2958 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0600 ? 336 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0072 ? 84 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 38.9045 ? 822 ? f_dihedral_angle_d ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 9.50 _refine_ls_shell.d_res_low 37.01 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.number_reflns_R_work 1291 _refine_ls_shell.percent_reflns_obs 73.28 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.1895 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1860 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7U3S _struct.title ;[2T7+21] Self-assembling tensegrity triangle with two turns of DNA and the sticky end addition of a two-turn linker per axis with R3 symmetry ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7U3S _struct_keywords.text 'Tensegrity triangle, self-assembling crystal, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 6 O2 ? ? A DG 103 D DC 142 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog2 hydrog ? ? C DC 4 N3 ? ? ? 1_555 D DG 5 N1 ? ? A DC 104 D DG 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 4 N4 ? ? ? 1_555 D DG 5 O6 ? ? A DC 104 D DG 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 4 O2 ? ? ? 1_555 D DG 5 N2 ? ? A DC 104 D DG 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 4 O4 ? ? A DA 105 D DT 140 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog6 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 3 N3 ? ? A DG 106 D DC 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 3 O2 ? ? A DG 106 D DC 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 3 N4 ? ? A DG 106 D DC 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 2 N1 ? ? A DC 107 D DG 138 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 2 O6 ? ? A DC 107 D DG 138 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 2 N2 ? ? A DC 107 D DG 138 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 1 N1 ? ? A DC 108 D DG 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 1 O6 ? ? A DC 108 D DG 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 1 N2 ? ? A DC 108 D DG 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 1 N3 ? ? ? 1_555 C DG 15 N1 ? ? B DC 130 A DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 1 N4 ? ? ? 1_555 C DG 15 O6 ? ? B DC 130 A DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 1 O2 ? ? ? 1_555 C DG 15 N2 ? ? B DC 130 A DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 14 N1 ? ? B DC 131 A DG 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 14 O6 ? ? B DC 131 A DG 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 14 N2 ? ? B DC 131 A DG 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 13 N3 ? ? B DG 132 A DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 3 N2 ? ? ? 1_555 C DC 13 O2 ? ? B DG 132 A DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 3 O6 ? ? ? 1_555 C DC 13 N4 ? ? B DG 132 A DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 4 O4 ? ? ? 1_555 C DA 12 N6 ? ? B DT 133 A DA 112 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog25 hydrog ? ? A DT 4 N3 ? ? ? 1_555 C DC 13 O2 ? ? B DT 133 A DC 113 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog26 hydrog ? ? A DA 5 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 134 A DT 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 5 N6 ? ? ? 1_555 C DT 11 O4 ? ? B DA 134 A DT 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 6 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 135 A DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 6 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 135 A DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 6 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 135 A DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 7 N1 ? ? ? 1_555 C DT 9 N3 ? ? B DA 136 A DT 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 7 N6 ? ? ? 1_555 C DT 9 O4 ? ? B DA 136 A DT 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 2 N3 ? ? ? 1_555 E DG 1 N1 ? ? C DC 123 X DG 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 2 N4 ? ? ? 1_555 E DG 1 O6 ? ? C DC 123 X DG 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 2 O2 ? ? ? 1_555 E DG 1 N2 ? ? C DC 123 X DG 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 21 N6 ? ? C DT 124 A DA 121 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog37 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 20 N3 ? ? C DG 125 A DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 20 O2 ? ? C DG 125 A DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 20 N4 ? ? C DG 125 A DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 19 N3 ? ? C DA 126 A DT 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 19 O4 ? ? C DA 126 A DT 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 18 N1 ? ? C DT 127 A DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 18 N6 ? ? C DT 127 A DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 17 N3 ? ? C DG 128 A DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 17 O2 ? ? C DG 128 A DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 17 N4 ? ? C DG 128 A DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 16 N1 ? ? C DT 129 A DA 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 16 N6 ? ? C DT 129 A DA 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DT 3 N3 ? ? ? 1_555 F DA 21 N1 ? ? X DT 124 Y DA 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DT 3 O4 ? ? ? 1_555 F DA 21 N6 ? ? X DT 124 Y DA 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DG 4 N1 ? ? ? 1_555 F DC 20 N3 ? ? X DG 125 Y DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DG 4 N2 ? ? ? 1_555 F DC 20 O2 ? ? X DG 125 Y DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DG 4 O6 ? ? ? 1_555 F DC 20 N4 ? ? X DG 125 Y DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DT 6 N3 ? ? ? 1_555 F DA 18 N1 ? ? X DT 127 Y DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DT 6 O4 ? ? ? 1_555 F DA 18 N6 ? ? X DT 127 Y DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DG 7 N1 ? ? ? 1_555 F DC 17 N3 ? ? X DG 128 Y DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DG 7 N2 ? ? ? 1_555 F DC 17 O2 ? ? X DG 128 Y DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DG 7 O6 ? ? ? 1_555 F DC 17 N4 ? ? X DG 128 Y DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DA 8 N1 ? ? ? 1_555 F DT 16 N3 ? ? X DA 129 Y DT 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DA 8 N6 ? ? ? 1_555 F DT 16 O4 ? ? X DA 129 Y DT 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? E DC 9 N3 ? ? ? 1_555 F DG 15 N1 ? ? X DC 130 Y DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E DC 9 N4 ? ? ? 1_555 F DG 15 O6 ? ? X DC 130 Y DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E DC 9 O2 ? ? ? 1_555 F DG 15 N2 ? ? X DC 130 Y DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? E DG 10 N1 ? ? ? 1_555 F DC 14 N3 ? ? X DG 131 Y DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? E DG 10 N2 ? ? ? 1_555 F DC 14 O2 ? ? X DG 131 Y DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? E DG 10 O6 ? ? ? 1_555 F DC 14 N4 ? ? X DG 131 Y DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? E DA 12 N1 ? ? ? 1_555 F DT 12 N3 ? ? X DA 133 Y DT 112 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog68 hydrog ? ? E DG 13 N1 ? ? ? 1_555 F DC 11 N3 ? ? X DG 134 Y DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? E DG 13 N2 ? ? ? 1_555 F DC 11 O2 ? ? X DG 134 Y DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? E DG 13 O6 ? ? ? 1_555 F DC 11 N4 ? ? X DG 134 Y DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? E DG 16 N1 ? ? ? 1_555 F DC 8 N3 ? ? X DG 137 Y DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? E DG 16 N2 ? ? ? 1_555 F DC 8 O2 ? ? X DG 137 Y DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? E DG 16 O6 ? ? ? 1_555 F DC 8 N4 ? ? X DG 137 Y DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? E DC 17 N3 ? ? ? 1_555 F DG 7 N1 ? ? X DC 138 Y DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? E DC 17 N4 ? ? ? 1_555 F DG 7 O6 ? ? X DC 138 Y DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? E DC 17 O2 ? ? ? 1_555 F DG 7 N2 ? ? X DC 138 Y DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? E DA 18 N1 ? ? ? 1_555 F DT 6 N3 ? ? X DA 139 Y DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? E DA 18 N6 ? ? ? 1_555 F DT 6 O4 ? ? X DA 139 Y DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? E DG 19 N1 ? ? ? 1_555 F DC 5 N3 ? ? X DG 140 Y DC 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? E DG 19 N2 ? ? ? 1_555 F DC 5 O2 ? ? X DG 140 Y DC 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? E DG 19 O6 ? ? ? 1_555 F DC 5 N4 ? ? X DG 140 Y DC 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? E DA 20 N1 ? ? ? 1_555 F DT 4 N3 ? ? X DA 141 Y DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? E DA 20 N6 ? ? ? 1_555 F DT 4 O4 ? ? X DA 141 Y DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? E DG 21 N1 ? ? ? 1_555 F DC 3 N3 ? ? X DG 142 Y DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? E DG 21 N2 ? ? ? 1_555 F DC 3 O2 ? ? X DG 142 Y DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? E DG 21 O6 ? ? ? 1_555 F DC 3 N4 ? ? X DG 142 Y DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 7U3S _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.004701 _atom_sites.fract_transf_matrix[1][2] 0.002714 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005428 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005721 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 5.96793 ? ? ? 14.89577 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 14.90797 ? ? ? 11.91318 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 130 130 DC DC B . n A 1 2 DC 2 131 131 DC DC B . n A 1 3 DG 3 132 132 DG DG B . n A 1 4 DT 4 133 133 DT DT B . n A 1 5 DA 5 134 134 DA DA B . n A 1 6 DC 6 135 135 DC DC B . n A 1 7 DA 7 136 136 DA DA B . n B 2 1 DT 1 122 122 DT DT C . n B 2 2 DC 2 123 123 DC DC C . n B 2 3 DT 3 124 124 DT DT C . n B 2 4 DG 4 125 125 DG DG C . n B 2 5 DA 5 126 126 DA DA C . n B 2 6 DT 6 127 127 DT DT C . n B 2 7 DG 7 128 128 DG DG C . n B 2 8 DT 8 129 129 DT DT C . n C 3 1 DG 1 101 101 DG DG A . n C 3 2 DA 2 102 102 DA DA A . n C 3 3 DG 3 103 103 DG DG A . n C 3 4 DC 4 104 104 DC DC A . n C 3 5 DA 5 105 105 DA DA A . n C 3 6 DG 6 106 106 DG DG A . n C 3 7 DC 7 107 107 DC DC A . n C 3 8 DC 8 108 108 DC DC A . n C 3 9 DT 9 109 109 DT DT A . n C 3 10 DG 10 110 110 DG DG A . n C 3 11 DT 11 111 111 DT DT A . n C 3 12 DA 12 112 112 DA DA A . n C 3 13 DC 13 113 113 DC DC A . n C 3 14 DG 14 114 114 DG DG A . n C 3 15 DG 15 115 115 DG DG A . n C 3 16 DA 16 116 116 DA DA A . n C 3 17 DC 17 117 117 DC DC A . n C 3 18 DA 18 118 118 DA DA A . n C 3 19 DT 19 119 119 DT DT A . n C 3 20 DC 20 120 120 DC DC A . n C 3 21 DA 21 121 121 DA DA A . n D 4 1 DG 1 137 137 DG DG D . n D 4 2 DG 2 138 138 DG DG D . n D 4 3 DC 3 139 139 DC DC D . n D 4 4 DT 4 140 140 DT DT D . n D 4 5 DG 5 141 141 DG DG D . n D 4 6 DC 6 142 142 DC DC D . n E 5 1 DG 1 122 122 DG DG X . n E 5 2 DA 2 123 123 DA DA X . n E 5 3 DT 3 124 124 DT DT X . n E 5 4 DG 4 125 125 DG DG X . n E 5 5 DC 5 126 126 DC DC X . n E 5 6 DT 6 127 127 DT DT X . n E 5 7 DG 7 128 128 DG DG X . n E 5 8 DA 8 129 129 DA DA X . n E 5 9 DC 9 130 130 DC DC X . n E 5 10 DG 10 131 131 DG DG X . n E 5 11 DT 11 132 132 DT DT X . n E 5 12 DA 12 133 133 DA DA X . n E 5 13 DG 13 134 134 DG DG X . n E 5 14 DT 14 135 135 DT DT X . n E 5 15 DA 15 136 136 DA DA X . n E 5 16 DG 16 137 137 DG DG X . n E 5 17 DC 17 138 138 DC DC X . n E 5 18 DA 18 139 139 DA DA X . n E 5 19 DG 19 140 140 DG DG X . n E 5 20 DA 20 141 141 DA DA X . n E 5 21 DG 21 142 142 DG DG X . n F 6 1 DT 1 101 101 DT DT Y . n F 6 2 DC 2 102 102 DC DC Y . n F 6 3 DC 3 103 103 DC DC Y . n F 6 4 DT 4 104 104 DT DT Y . n F 6 5 DC 5 105 105 DC DC Y . n F 6 6 DT 6 106 106 DT DT Y . n F 6 7 DG 7 107 107 DG DG Y . n F 6 8 DC 8 108 108 DC DC Y . n F 6 9 DT 9 109 109 DT DT Y . n F 6 10 DA 10 110 110 DA DA Y . n F 6 11 DC 11 111 111 DC DC Y . n F 6 12 DT 12 112 112 DT DT Y . n F 6 13 DA 13 113 113 DA DA Y . n F 6 14 DC 14 114 114 DC DC Y . n F 6 15 DG 15 115 115 DG DG Y . n F 6 16 DT 16 116 116 DT DT Y . n F 6 17 DC 17 117 117 DC DC Y . n F 6 18 DA 18 118 118 DA DA Y . n F 6 19 DG 19 119 119 DG DG Y . n F 6 20 DC 20 120 120 DC DC Y . n F 6 21 DA 21 121 121 DA DA Y . n # _pdbx_contact_author.id 3 _pdbx_contact_author.email ncs01@nyu.edu _pdbx_contact_author.name_first Nadrian _pdbx_contact_author.name_last Seeman _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-9680-4649 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octadecameric _pdbx_struct_assembly.oligomeric_count 18 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F 1 2 A,B,C,D,E,F 1 3 A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-09-28 2 'Structure model' 1 1 2022-12-21 3 'Structure model' 1 2 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.title' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z 3 -x+y,-x,z 4 x+1/3,y+2/3,z+2/3 5 -y+1/3,x-y+2/3,z+2/3 6 -x+y+1/3,-x+2/3,z+2/3 7 x+2/3,y+1/3,z+1/3 8 -y+2/3,x-y+1/3,z+1/3 9 -x+y+2/3,-x+1/3,z+1/3 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 4.75500906407 13.3077167324 -47.0526485291 10.3876343883 ? -3.37849686072 ? -0.211521159208 ? 13.2310232795 ? 1.56452274801 ? 7.73281795472 ? 2.45166338185 ? -1.81845775047 ? 1.62163119052 ? 1.76535007434 ? -2.46195026542 ? 4.90447030122 ? 0.249580789288 ? 0.299820292067 ? -0.0614075724086 ? 3.84194795806 ? 1.31298802317 ? 2.3011137866 ? 4.84174123825 ? 2.05958559338 ? -1.34640786822 ? 2 'X-RAY DIFFRACTION' ? refined -12.9788978005 22.0278836485 -33.1042863305 12.417511662 ? -0.506219267427 ? 4.96592117012 ? 10.8602079901 ? -1.74626399837 ? 7.12993695016 ? 5.21615178814 ? 0.55001955767 ? 2.86594023027 ? 0.0942119939433 ? 0.236737934063 ? 1.63235361707 ? -2.55065787098 ? 1.25951397873 ? 1.95570569368 ? -1.15368640389 ? -1.53004209373 ? 0.831710422439 ? -1.47153402169 ? 3.06414599269 ? -13.4798677203 ? 3 'X-RAY DIFFRACTION' ? refined 8.7403867028 12.8565621137 -49.1266368402 9.5646553353 ? 0.291134958242 ? 3.24369956875 ? 11.720015108 ? -0.53941740736 ? 8.51205597204 ? 0.71058932711 ? -0.293132059813 ? -0.480494502081 ? 0.502764804797 ? 0.349729377732 ? 0.14424705207 ? 3.73466151416 ? -1.02844081243 ? -2.63371150891 ? -1.51670510162 ? 2.04761611959 ? 4.47644938766 ? 1.62527713445 ? -2.18687330633 ? 11.1246649211 ? 4 'X-RAY DIFFRACTION' ? refined 21.7761247794 6.06726982196 -59.3043062207 14.2348694993 ? -2.92508704919 ? 2.04772798755 ? 14.0390430468 ? -2.90855189238 ? 5.39132427402 ? 0.0462036088847 ? 0.205261613893 ? -0.164429609764 ? 1.04200004433 ? -1.00448661118 ? 1.06337756842 ? -0.63574798109 ? -1.37486785848 ? -2.68011830566 ? 1.57475091363 ? -0.00296259131782 ? -3.05756304889 ? 0.947131793415 ? 0.345942028118 ? -2.49250425563 ? 5 'X-RAY DIFFRACTION' ? refined -41.8706983865 45.1680996474 -17.9364913619 13.0896411954 ? -1.69247610275 ? 2.02925650137 ? 12.118923111 ? -2.1738718426 ? 13.0746610909 ? 0.0398902762219 ? 0.188872461513 ? -0.141642976955 ? 0.0538890899669 ? 0.0937159851039 ? 0.0132100376281 ? -1.07357757058 ? -2.7040553684 ? -0.804062413666 ? -2.83790414248 ? -0.875558619403 ? 1.80197839661 ? 0.681154942978 ? -1.57094298748 ? -9.52116878317 ? 6 'X-RAY DIFFRACTION' ? refined -48.3764628506 49.7873650541 -14.8059884788 12.0672185267 ? 0.662467960743 ? 3.26125460107 ? 15.4622961058 ? -2.78118566642 ? 8.60788297589 ? 0.336296364877 ? 0.115134302415 ? 0.188584016918 ? 0.295307225208 ? -0.281519989975 ? 0.287510253703 ? -0.950698511482 ? 1.08446682 ? -0.0580736638273 ? -0.622227917338 ? -0.138422125457 ? -3.22961293202 ? 0.107246495991 ? 0.0952266374814 ? -4.66809154234 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? B 130 ? A ? B 136 ? ? ;(chain 'B' and resid 130 through 136) ; 2 'X-RAY DIFFRACTION' 2 B ? C 122 ? B ? C 129 ? ? ;(chain 'C' and resid 122 through 129) ; 3 'X-RAY DIFFRACTION' 3 C ? A 101 ? C ? A 121 ? ? ;(chain 'A' and resid 101 through 121) ; 4 'X-RAY DIFFRACTION' 4 D ? D 137 ? D ? D 142 ? ? ;(chain 'D' and resid 137 through 142) ; 5 'X-RAY DIFFRACTION' 5 E ? X 122 ? E ? X 142 ? ? ;(chain 'X' and resid 122 through 142) ; 6 'X-RAY DIFFRACTION' 6 F ? Y 101 ? F ? Y 121 ? ? ;(chain 'Y' and resid 101 through 121) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.18.2_3874 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O2 _pdbx_validate_close_contact.auth_asym_id_1 X _pdbx_validate_close_contact.auth_comp_id_1 DT _pdbx_validate_close_contact.auth_seq_id_1 127 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N2 _pdbx_validate_close_contact.auth_asym_id_2 Y _pdbx_validate_close_contact.auth_comp_id_2 DG _pdbx_validate_close_contact.auth_seq_id_2 119 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" D DG 138 ? ? "C3'" D DG 138 ? ? 1.379 1.419 -0.040 0.006 N 2 1 "O3'" Y DA 121 ? ? "C3'" Y DA 121 ? ? 1.363 1.419 -0.056 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 130 ? ? "C1'" B DC 130 ? ? N1 B DC 130 ? ? 111.31 108.30 3.01 0.30 N 2 1 "O4'" B DC 131 ? ? "C4'" B DC 131 ? ? "C3'" B DC 131 ? ? 101.87 104.50 -2.63 0.40 N 3 1 "O4'" B DG 132 ? ? "C4'" B DG 132 ? ? "C3'" B DG 132 ? ? 102.00 104.50 -2.50 0.40 N 4 1 "O4'" B DT 133 ? ? "C1'" B DT 133 ? ? N1 B DT 133 ? ? 112.08 108.30 3.78 0.30 N 5 1 "O4'" B DA 134 ? ? "C1'" B DA 134 ? ? N9 B DA 134 ? ? 111.16 108.30 2.86 0.30 N 6 1 "O4'" A DA 102 ? ? "C1'" A DA 102 ? ? N9 A DA 102 ? ? 111.26 108.30 2.96 0.30 N 7 1 "O4'" A DT 111 ? ? "C1'" A DT 111 ? ? N1 A DT 111 ? ? 110.83 108.30 2.53 0.30 N 8 1 "O4'" A DA 118 ? ? "C1'" A DA 118 ? ? N9 A DA 118 ? ? 110.39 108.30 2.09 0.30 N 9 1 "O4'" Y DC 102 ? ? "C1'" Y DC 102 ? ? N1 Y DC 102 ? ? 111.21 108.30 2.91 0.30 N 10 1 "O4'" Y DT 104 ? ? "C1'" Y DT 104 ? ? N1 Y DT 104 ? ? 110.91 108.30 2.61 0.30 N 11 1 "O4'" Y DC 120 ? ? "C1'" Y DC 120 ? ? N1 Y DC 120 ? ? 110.95 108.30 2.65 0.30 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7U3S 'double helix' 7U3S 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 3 1_555 D DC 6 1_555 -3.395 0.014 -0.241 -3.163 10.319 7.130 1 A_DG103:DC142_D A 103 ? D 142 ? ? ? 1 C DC 4 1_555 D DG 5 1_555 0.155 0.027 0.173 3.414 -1.962 -2.870 2 A_DC104:DG141_D A 104 ? D 141 ? 19 1 1 C DA 5 1_555 D DT 4 1_555 -1.254 0.259 -0.428 0.280 -11.766 -27.791 3 A_DA105:DT140_D A 105 ? D 140 ? ? ? 1 C DG 6 1_555 D DC 3 1_555 -0.216 -0.021 -0.156 1.463 -12.330 2.055 4 A_DG106:DC139_D A 106 ? D 139 ? 19 1 1 C DC 7 1_555 D DG 2 1_555 0.190 -0.063 -0.228 -3.572 -12.197 1.601 5 A_DC107:DG138_D A 107 ? D 138 ? 19 1 1 C DC 8 1_555 D DG 1 1_555 0.032 -0.024 0.198 -3.493 -6.185 -0.333 6 A_DC108:DG137_D A 108 ? D 137 ? 19 1 1 C DT 9 1_555 A DA 7 1_555 -0.080 0.068 0.351 -2.847 -6.449 -7.584 7 A_DT109:DA136_B A 109 ? B 136 ? 20 1 1 C DG 10 1_555 A DC 6 1_555 -0.053 -0.271 -0.681 -0.152 3.208 -1.727 8 A_DG110:DC135_B A 110 ? B 135 ? 19 1 1 C DT 11 1_555 A DA 5 1_555 -0.335 -0.312 -1.028 9.480 -4.958 2.732 9 A_DT111:DA134_B A 111 ? B 134 ? 20 1 1 C DA 12 1_555 A DT 4 1_555 2.502 0.002 -1.667 2.508 -15.037 -21.574 10 A_DA112:DT133_B A 112 ? B 133 ? ? ? 1 C DC 13 1_555 A DG 3 1_555 0.249 -0.431 -1.117 10.663 -16.343 9.703 11 A_DC113:DG132_B A 113 ? B 132 ? 19 1 1 C DG 14 1_555 A DC 2 1_555 -0.048 -0.171 0.500 7.696 -21.392 -2.667 12 A_DG114:DC131_B A 114 ? B 131 ? 19 1 1 C DG 15 1_555 A DC 1 1_555 -0.086 -0.127 0.122 1.764 -8.971 2.455 13 A_DG115:DC130_B A 115 ? B 130 ? 19 1 1 C DA 16 1_555 B DT 8 1_555 -0.001 0.231 0.088 8.132 -10.351 -2.016 14 A_DA116:DT129_C A 116 ? C 129 ? 20 1 1 C DC 17 1_555 B DG 7 1_555 0.111 0.253 -0.102 1.698 -6.651 -0.321 15 A_DC117:DG128_C A 117 ? C 128 ? 19 1 1 C DA 18 1_555 B DT 6 1_555 0.179 -0.072 -0.182 0.375 -10.122 3.663 16 A_DA118:DT127_C A 118 ? C 127 ? 20 1 1 C DT 19 1_555 B DA 5 1_555 -0.229 -0.055 -0.529 10.626 -12.402 -2.811 17 A_DT119:DA126_C A 119 ? C 126 ? 20 1 1 C DC 20 1_555 B DG 4 1_555 0.060 -0.239 -0.900 8.852 -10.979 -0.300 18 A_DC120:DG125_C A 120 ? C 125 ? 19 1 1 C DA 21 1_555 B DT 3 1_555 1.129 1.224 -1.146 21.847 -7.373 -37.929 19 A_DA121:DT124_C A 121 ? C 124 ? ? ? 1 E DG 1 1_555 B DC 2 1_555 -0.039 -0.185 -0.608 4.428 -5.727 1.733 20 X_DG122:DC123_C X 122 ? C 123 ? 19 1 1 E DT 3 1_555 F DA 21 1_555 0.198 0.192 -0.151 11.083 -18.804 -0.709 21 X_DT124:DA121_Y X 124 ? Y 121 ? 20 1 1 E DG 4 1_555 F DC 20 1_555 -0.296 0.133 -0.842 -8.563 -8.501 5.954 22 X_DG125:DC120_Y X 125 ? Y 120 ? 19 1 1 E DT 6 1_555 F DA 18 1_555 -0.285 -0.315 -1.079 -3.388 -3.132 -7.659 23 X_DT127:DA118_Y X 127 ? Y 118 ? 20 1 1 E DG 7 1_555 F DC 17 1_555 -0.417 -0.134 0.165 1.824 -12.373 1.709 24 X_DG128:DC117_Y X 128 ? Y 117 ? 19 1 1 E DA 8 1_555 F DT 16 1_555 0.094 0.134 -0.626 -3.550 -16.518 -8.885 25 X_DA129:DT116_Y X 129 ? Y 116 ? 20 1 1 E DC 9 1_555 F DG 15 1_555 0.225 0.001 -0.473 -3.292 -13.272 3.912 26 X_DC130:DG115_Y X 130 ? Y 115 ? 19 1 1 E DG 10 1_555 F DC 14 1_555 -0.142 -0.080 0.615 2.803 -13.639 -0.162 27 X_DG131:DC114_Y X 131 ? Y 114 ? 19 1 1 E DA 12 1_555 F DT 12 1_555 -0.395 0.368 -0.009 -1.524 -17.136 10.900 28 X_DA133:DT112_Y X 133 ? Y 112 ? ? 1 1 E DG 13 1_555 F DC 11 1_555 -0.271 -0.210 -0.898 -3.293 -12.056 5.163 29 X_DG134:DC111_Y X 134 ? Y 111 ? 19 1 1 E DG 16 1_555 F DC 8 1_555 -0.390 -0.114 -0.869 -11.145 -14.385 4.121 30 X_DG137:DC108_Y X 137 ? Y 108 ? 19 1 1 E DC 17 1_555 F DG 7 1_555 0.099 -0.111 -0.266 -1.858 -13.918 0.969 31 X_DC138:DG107_Y X 138 ? Y 107 ? 19 1 1 E DA 18 1_555 F DT 6 1_555 0.313 0.059 0.938 9.276 -8.931 -4.771 32 X_DA139:DT106_Y X 139 ? Y 106 ? 20 1 1 E DG 19 1_555 F DC 5 1_555 -0.166 0.041 -0.175 2.863 -12.518 0.549 33 X_DG140:DC105_Y X 140 ? Y 105 ? 19 1 1 E DA 20 1_555 F DT 4 1_555 -0.147 0.264 -0.299 -5.060 -12.045 1.270 34 X_DA141:DT104_Y X 141 ? Y 104 ? 20 1 1 E DG 21 1_555 F DC 3 1_555 -0.476 -0.032 -0.985 -23.765 -17.154 9.306 35 X_DG142:DC103_Y X 142 ? Y 103 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 3 1_555 D DC 6 1_555 C DC 4 1_555 D DG 5 1_555 -0.569 -0.569 3.311 -3.624 2.963 35.348 -1.366 0.396 3.294 4.853 5.936 35.647 1 AA_DG103DC104:DG141DC142_DD A 103 ? D 142 ? A 104 ? D 141 ? 1 C DC 4 1_555 D DG 5 1_555 C DA 5 1_555 D DT 4 1_555 -2.079 -0.461 2.893 -2.382 7.718 31.694 -2.011 3.327 2.849 13.852 4.275 32.682 2 AA_DC104DA105:DT140DG141_DD A 104 ? D 141 ? A 105 ? D 140 ? 1 C DA 5 1_555 D DT 4 1_555 C DG 6 1_555 D DC 3 1_555 1.573 -0.382 2.959 -0.777 3.061 39.502 -0.884 -2.402 2.892 4.520 1.147 39.623 3 AA_DA105DG106:DC139DT140_DD A 105 ? D 140 ? A 106 ? D 139 ? 1 C DG 6 1_555 D DC 3 1_555 C DC 7 1_555 D DG 2 1_555 -0.290 -1.015 3.067 -0.916 1.462 34.522 -1.919 0.355 3.029 2.461 1.542 34.564 4 AA_DG106DC107:DG138DC139_DD A 106 ? D 139 ? A 107 ? D 138 ? 1 C DC 7 1_555 D DG 2 1_555 C DC 8 1_555 D DG 1 1_555 0.333 -0.144 3.419 -5.011 -1.033 37.935 -0.085 -1.163 3.352 -1.580 7.666 38.266 5 AA_DC107DC108:DG137DG138_DD A 107 ? D 138 ? A 108 ? D 137 ? 1 C DC 8 1_555 D DG 1 1_555 C DT 9 1_555 A DA 7 1_555 -2.698 -0.966 3.363 -3.957 -13.491 12.272 6.201 5.636 3.486 -47.097 13.815 18.642 6 AA_DC108DT109:DA136DG137_BD A 108 ? D 137 ? A 109 ? B 136 ? 1 C DT 9 1_555 A DA 7 1_555 C DG 10 1_555 A DC 6 1_555 1.096 -0.385 3.371 5.613 7.182 27.555 -2.433 -0.890 3.321 14.582 -11.396 28.996 7 AA_DT109DG110:DC135DA136_BB A 109 ? B 136 ? A 110 ? B 135 ? 1 C DG 10 1_555 A DC 6 1_555 C DT 11 1_555 A DA 5 1_555 1.301 -0.361 3.207 6.300 5.172 42.447 -0.999 -1.148 3.294 7.065 -8.607 43.187 8 AA_DG110DT111:DA134DC135_BB A 110 ? B 135 ? A 111 ? B 134 ? 1 C DT 11 1_555 A DA 5 1_555 C DA 12 1_555 A DT 4 1_555 -3.244 -0.267 3.971 7.925 9.967 39.849 -1.543 5.481 3.146 14.191 -11.284 41.755 9 AA_DT111DA112:DT133DA134_BB A 111 ? B 134 ? A 112 ? B 133 ? 1 C DA 12 1_555 A DT 4 1_555 C DC 13 1_555 A DG 3 1_555 2.343 -0.839 2.908 6.989 -2.131 28.005 -1.214 -3.164 3.433 -4.311 -14.139 28.924 10 AA_DA112DC113:DG132DT133_BB A 112 ? B 133 ? A 113 ? B 132 ? 1 C DC 13 1_555 A DG 3 1_555 C DG 14 1_555 A DC 2 1_555 0.306 4.061 3.435 -5.980 -2.131 48.775 5.044 -0.826 3.210 -2.568 7.205 49.161 11 AA_DC113DG114:DC131DG132_BB A 113 ? B 132 ? A 114 ? B 131 ? 1 C DG 14 1_555 A DC 2 1_555 C DG 15 1_555 A DC 1 1_555 1.085 1.686 3.121 2.690 -3.479 50.329 2.210 -1.091 3.056 -4.082 -3.156 50.508 12 AA_DG114DG115:DC130DC131_BB A 114 ? B 131 ? A 115 ? B 130 ? 1 C DG 15 1_555 A DC 1 1_555 C DA 16 1_555 B DT 8 1_555 -1.184 0.484 3.018 0.138 5.431 15.421 -1.893 4.254 2.999 19.469 -0.494 16.345 13 AA_DG115DA116:DT129DC130_CB A 115 ? B 130 ? A 116 ? C 129 ? 1 C DA 16 1_555 B DT 8 1_555 C DC 17 1_555 B DG 7 1_555 0.613 -0.400 3.326 1.533 1.035 26.384 -1.154 -0.924 3.338 2.263 -3.353 26.448 14 AA_DA116DC117:DG128DT129_CC A 116 ? C 129 ? A 117 ? C 128 ? 1 C DC 17 1_555 B DG 7 1_555 C DA 18 1_555 B DT 6 1_555 1.542 0.747 2.890 6.143 4.985 36.510 0.551 -1.649 3.170 7.844 -9.666 37.328 15 AA_DC117DA118:DT127DG128_CC A 117 ? C 128 ? A 118 ? C 127 ? 1 C DA 18 1_555 B DT 6 1_555 C DT 19 1_555 B DA 5 1_555 -0.396 0.198 2.545 2.464 1.619 33.295 0.136 1.005 2.516 2.819 -4.291 33.422 16 AA_DA118DT119:DA126DT127_CC A 118 ? C 127 ? A 119 ? C 126 ? 1 C DT 19 1_555 B DA 5 1_555 C DC 20 1_555 B DG 4 1_555 0.457 -0.226 2.866 4.284 1.406 33.024 -0.601 -0.167 2.889 2.460 -7.493 33.321 17 AA_DT119DC120:DG125DA126_CC A 119 ? C 126 ? A 120 ? C 125 ? 1 C DC 20 1_555 B DG 4 1_555 C DA 21 1_555 B DT 3 1_555 -0.894 0.688 3.147 7.833 8.435 28.963 -0.264 3.103 2.896 16.085 -14.939 31.121 18 AA_DC120DA121:DT124DG125_CC A 120 ? C 125 ? A 121 ? C 124 ? 1 C DA 21 1_555 B DT 3 1_555 E DG 1 1_555 B DC 2 1_555 2.526 -0.315 3.604 -3.754 0.922 32.935 -0.717 -5.094 3.294 1.620 6.593 33.155 19 AX_DA121DG122:DC123DT124_CC A 121 ? C 124 ? X 122 ? C 123 ? 1 E DG 1 1_555 B DC 2 1_555 E DT 3 1_555 F DA 21 1_555 0.129 -1.598 5.805 -7.522 7.200 76.884 -1.637 -0.479 5.631 5.765 6.023 77.477 20 XX_DG122DT124:DA121DC123_YC X 122 ? C 123 ? X 124 ? Y 121 ? 1 E DT 3 1_555 F DA 21 1_555 E DG 4 1_555 F DC 20 1_555 1.167 -0.557 4.807 5.531 -6.194 35.152 0.426 -0.701 4.952 -10.082 -9.003 36.090 21 XX_DT124DG125:DC120DA121_YY X 124 ? Y 121 ? X 125 ? Y 120 ? 1 E DG 4 1_555 F DC 20 1_555 E DT 6 1_555 F DA 18 1_555 -1.200 -1.146 5.901 3.741 1.630 60.713 -1.271 1.506 5.796 1.611 -3.696 60.837 22 XX_DG125DT127:DA118DC120_YY X 125 ? Y 120 ? X 127 ? Y 118 ? 1 E DT 6 1_555 F DA 18 1_555 E DG 7 1_555 F DC 17 1_555 0.967 1.116 3.203 -4.385 8.488 37.135 0.635 -2.024 3.241 13.065 6.750 38.302 23 XX_DT127DG128:DC117DA118_YY X 127 ? Y 118 ? X 128 ? Y 117 ? 1 E DG 7 1_555 F DC 17 1_555 E DA 8 1_555 F DT 16 1_555 -1.518 0.659 3.516 -3.760 -1.582 41.390 1.110 1.704 3.608 -2.231 5.304 41.582 24 XX_DG128DA129:DT116DC117_YY X 128 ? Y 117 ? X 129 ? Y 116 ? 1 E DA 8 1_555 F DT 16 1_555 E DC 9 1_555 F DG 15 1_555 0.445 -0.248 3.496 -4.222 -5.403 36.786 0.373 -1.287 3.427 -8.471 6.620 37.398 25 XX_DA129DC130:DG115DT116_YY X 129 ? Y 116 ? X 130 ? Y 115 ? 1 E DC 9 1_555 F DG 15 1_555 E DG 10 1_555 F DC 14 1_555 -0.519 -0.100 3.570 -2.942 -3.918 33.214 0.533 0.368 3.590 -6.807 5.112 33.563 26 XX_DC130DG131:DC114DG115_YY X 130 ? Y 115 ? X 131 ? Y 114 ? 1 E DG 10 1_555 F DC 14 1_555 E DA 12 1_555 F DT 12 1_555 0.087 -0.671 6.493 1.316 0.417 70.669 -0.609 0.015 6.490 0.360 -1.137 70.680 27 XX_DG131DA133:DT112DC114_YY X 131 ? Y 114 ? X 133 ? Y 112 ? 1 E DA 12 1_555 F DT 12 1_555 E DG 13 1_555 F DC 11 1_555 -0.430 0.043 3.412 -0.262 2.515 38.277 -0.263 0.620 3.411 3.830 0.399 38.357 28 XX_DA133DG134:DC111DT112_YY X 133 ? Y 112 ? X 134 ? Y 111 ? 1 E DG 16 1_555 F DC 8 1_555 E DC 17 1_555 F DG 7 1_555 -1.281 -0.753 2.904 -6.451 -2.440 37.354 -0.868 1.205 3.115 -3.770 9.969 37.963 29 XX_DG137DC138:DG107DC108_YY X 137 ? Y 108 ? X 138 ? Y 107 ? 1 E DC 17 1_555 F DG 7 1_555 E DA 18 1_555 F DT 6 1_555 -0.013 -0.121 3.561 -9.247 -10.483 36.177 1.232 -1.228 3.372 -16.158 14.253 38.699 30 XX_DC138DA139:DT106DG107_YY X 138 ? Y 107 ? X 139 ? Y 106 ? 1 E DA 18 1_555 F DT 6 1_555 E DG 19 1_555 F DC 5 1_555 -0.224 -0.479 3.703 2.420 -5.710 34.357 0.189 0.793 3.708 -9.569 -4.056 34.895 31 XX_DA139DG140:DC105DT106_YY X 139 ? Y 106 ? X 140 ? Y 105 ? 1 E DG 19 1_555 F DC 5 1_555 E DA 20 1_555 F DT 4 1_555 0.786 -0.299 3.798 -1.625 -7.063 37.202 0.595 -1.454 3.754 -10.944 2.517 37.877 32 XX_DG140DA141:DT104DC105_YY X 140 ? Y 105 ? X 141 ? Y 104 ? 1 E DA 20 1_555 F DT 4 1_555 E DG 21 1_555 F DC 3 1_555 0.380 -0.659 3.903 3.743 5.243 30.856 -2.371 0.127 3.761 9.721 -6.940 31.506 33 XX_DA141DG142:DC103DT104_YY X 141 ? Y 104 ? X 142 ? Y 103 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Office of Naval Research (ONR)' 'United States' N000141912596 1 'Department of Energy (DOE, United States)' 'United States' DE-SC0007991 2 'National Science Foundation (NSF, United States)' 'United States' 2106790 3 'Human Frontier Science Program (HFSP)' France RPG0010/2017 4 'National Science Foundation (NSF, United States)' 'United States' DMR-1420073 5 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3GBI _pdbx_initial_refinement_model.details 'PDB entry 3GBI' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'H 3' _space_group.name_Hall 'H 3' _space_group.IT_number 146 _space_group.crystal_system trigonal _space_group.id 1 #