data_7U4P # _entry.id 7U4P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7U4P pdb_00007u4p 10.2210/pdb7u4p/pdb WWPDB D_1000263523 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-03-15 2 'Structure model' 1 1 2023-10-25 3 'Structure model' 1 2 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model 4 3 'Structure model' citation 5 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.country' 2 3 'Structure model' '_citation.journal_abbrev' 3 3 'Structure model' '_citation.journal_id_CSD' 4 3 'Structure model' '_citation.journal_id_ISSN' 5 3 'Structure model' '_citation.journal_volume' 6 3 'Structure model' '_citation.page_first' 7 3 'Structure model' '_citation.page_last' 8 3 'Structure model' '_citation.pdbx_database_id_DOI' 9 3 'Structure model' '_citation.pdbx_database_id_PubMed' 10 3 'Structure model' '_citation.title' 11 3 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7U4P _pdbx_database_status.recvd_initial_deposition_date 2022-02-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 3 _pdbx_contact_author.email jsnowick@uci.edu _pdbx_contact_author.name_first James _pdbx_contact_author.name_last Nowick _pdbx_contact_author.name_mi S _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2273-1029 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kreutzer, A.G.' 1 0000-0002-9724-6298 'Haerianardakani, S.' 2 0000-0003-1539-2345 'Nowick, J.S.' 3 0000-0002-2273-1029 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Cent.Sci.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2374-7951 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 104 _citation.page_last 121 _citation.title ;Antibodies Raised Against an A beta Oligomer Mimic Recognize Pathological Features in Alzheimer's Disease and Associated Amyloid-Disease Brain Tissue. ; _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acscentsci.3c00592 _citation.pdbx_database_id_PubMed 38292607 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kreutzer, A.G.' 1 0000-0002-9724-6298 primary 'Parrocha, C.M.T.' 2 0000-0002-6502-1297 primary 'Haerianardakani, S.' 3 0000-0003-1539-2345 primary 'Guaglianone, G.' 4 0000-0002-5189-2550 primary 'Nguyen, J.T.' 5 ? primary 'Diab, M.N.' 6 ? primary 'Yong, W.' 7 ? primary 'Perez-Rosendahl, M.' 8 ? primary 'Head, E.' 9 ? primary 'Nowick, J.S.' 10 0000-0002-2273-1029 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Amyloid-beta 17-36 peptide' 2214.628 3 ? ? ? ? 2 water nat water 18.015 25 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Amyloid-beta protein 40,Abeta40,Beta-APP40' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ORN)CVF(MEA)CEDVGSNKGAIIGL(ORN)V' _entity_poly.pdbx_seq_one_letter_code_can ACVFFCEDVGSNKGAIIGLAV _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ORN n 1 2 CYS n 1 3 VAL n 1 4 PHE n 1 5 MEA n 1 6 CYS n 1 7 GLU n 1 8 ASP n 1 9 VAL n 1 10 GLY n 1 11 SER n 1 12 ASN n 1 13 LYS n 1 14 GLY n 1 15 ALA n 1 16 ILE n 1 17 ILE n 1 18 GLY n 1 19 LEU n 1 20 ORN n 1 21 VAL n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 21 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MEA 'L-peptide linking' n N-METHYLPHENYLALANINE ? 'C10 H13 N O2' 179.216 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 ORN 'L-peptide linking' n L-ornithine ? 'C5 H12 N2 O2' 132.161 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ORN 1 1 1 ORN ORN A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 MEA 5 5 5 MEA MEA A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ORN 20 20 20 ORN ORN A . n A 1 21 VAL 21 21 21 VAL VAL A . n B 1 1 ORN 1 1 1 ORN ORN B . n B 1 2 CYS 2 2 2 CYS CYS B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 PHE 4 4 4 PHE PHE B . n B 1 5 MEA 5 5 5 MEA MEA B . n B 1 6 CYS 6 6 6 CYS CYS B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 ASP 8 8 8 ASP ASP B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 SER 11 11 11 SER SER B . n B 1 12 ASN 12 12 12 ASN ASN B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 GLY 14 14 14 GLY GLY B . n B 1 15 ALA 15 15 15 ALA ALA B . n B 1 16 ILE 16 16 16 ILE ILE B . n B 1 17 ILE 17 17 17 ILE ILE B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 ORN 20 20 20 ORN ORN B . n B 1 21 VAL 21 21 21 VAL VAL B . n C 1 1 ORN 1 1 1 ORN ORN C . n C 1 2 CYS 2 2 2 CYS CYS C . n C 1 3 VAL 3 3 3 VAL VAL C . n C 1 4 PHE 4 4 4 PHE PHE C . n C 1 5 MEA 5 5 5 MEA MEA C . n C 1 6 CYS 6 6 6 CYS CYS C . n C 1 7 GLU 7 7 7 GLU GLU C . n C 1 8 ASP 8 8 8 ASP ASP C . n C 1 9 VAL 9 9 9 VAL VAL C . n C 1 10 GLY 10 10 10 GLY GLY C . n C 1 11 SER 11 11 11 SER SER C . n C 1 12 ASN 12 12 12 ASN ASN C . n C 1 13 LYS 13 13 13 LYS LYS C . n C 1 14 GLY 14 14 14 GLY GLY C . n C 1 15 ALA 15 15 15 ALA ALA C . n C 1 16 ILE 16 16 16 ILE ILE C . n C 1 17 ILE 17 17 17 ILE ILE C . n C 1 18 GLY 18 18 18 GLY GLY C . n C 1 19 LEU 19 19 19 LEU LEU C . n C 1 20 ORN 20 20 20 ORN ORN C . n C 1 21 VAL 21 21 21 VAL VAL C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 101 2 HOH HOH A . D 2 HOH 2 102 10 HOH HOH A . D 2 HOH 3 103 30 HOH HOH A . D 2 HOH 4 104 13 HOH HOH A . D 2 HOH 5 105 27 HOH HOH A . D 2 HOH 6 106 15 HOH HOH A . E 2 HOH 1 101 11 HOH HOH B . E 2 HOH 2 102 18 HOH HOH B . E 2 HOH 3 103 6 HOH HOH B . E 2 HOH 4 104 16 HOH HOH B . E 2 HOH 5 105 23 HOH HOH B . E 2 HOH 6 106 25 HOH HOH B . E 2 HOH 7 107 4 HOH HOH B . E 2 HOH 8 108 9 HOH HOH B . E 2 HOH 9 109 28 HOH HOH B . F 2 HOH 1 101 14 HOH HOH C . F 2 HOH 2 102 5 HOH HOH C . F 2 HOH 3 103 17 HOH HOH C . F 2 HOH 4 104 21 HOH HOH C . F 2 HOH 5 105 22 HOH HOH C . F 2 HOH 6 106 12 HOH HOH C . F 2 HOH 7 107 19 HOH HOH C . F 2 HOH 8 108 26 HOH HOH C . F 2 HOH 9 109 3 HOH HOH C . F 2 HOH 10 110 29 HOH HOH C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? pointless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7U4P _cell.details ? _cell.formula_units_Z ? _cell.length_a 62.054 _cell.length_a_esd ? _cell.length_b 62.054 _cell.length_b_esd ? _cell.length_c 47.839 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 36 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7U4P _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 38.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Tris at pH 8.3, 0.2 M MgCl2, 2.8 M 1,6-hexanediol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-12-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Single crystal, cylindrically bent, Si(220)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97741 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97741 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7U4P _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.803 _reflns.d_resolution_low 31.03 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5373 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.74 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 36.2 _reflns.pdbx_Rmerge_I_obs 0.0643 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 39.93 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.803 _reflns_shell.d_res_low 1.868 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 522 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.9299 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.958 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 207.390 _refine.B_iso_mean 62.0242 _refine.B_iso_min 23.610 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7U4P _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.803 _refine.ls_d_res_low 31.0300 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 5373 _refine.ls_number_reflns_R_free 960 _refine.ls_number_reflns_R_work 8545 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8400 _refine.ls_percent_reflns_R_free 10.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2092 _refine.ls_R_factor_R_free 0.2473 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2051 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7JXO _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.1600 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0800 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.803 _refine_hist.d_res_low 31.0300 _refine_hist.number_atoms_solvent 25 _refine_hist.number_atoms_total 484 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 63 _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent 59.71 _refine_hist.pdbx_number_atoms_protein 459 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.803 1.9000 . . 133 1230 100.0000 . . . 0.3085 0.0000 0.2807 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9000 2.0200 . . 138 1212 100.0000 . . . 0.2753 0.0000 0.2326 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0200 2.1700 . . 131 1228 100.0000 . . . 0.2636 0.0000 0.2273 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1700 2.3900 . . 144 1210 100.0000 . . . 0.2618 0.0000 0.2422 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3900 2.7400 . . 132 1208 100.0000 . . . 0.2987 0.0000 0.2475 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7400 3.4500 . . 145 1228 100.0000 . . . 0.2152 0.0000 0.1986 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4500 31.0300 . . 137 1229 100.0000 . . . 0.2356 0.0000 0.1784 . . . . . . . . . . . # _struct.entry_id 7U4P _struct.title 'Covalently stabilized triangular trimer composed of Abeta17-36 beta-hairpins' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7U4P _struct_keywords.text ;Abeta oligomer, beta-hairpin, trimer, dodecamer, Alzheimer's disease, DE NOVO PROTEIN ; _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A4_HUMAN _struct_ref.pdbx_db_accession P05067 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KLVFFAEDVGSNKGAIIGLMV _struct_ref.pdbx_align_begin 687 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7U4P A 1 ? 21 ? P05067 687 ? 707 ? 1 21 2 1 7U4P B 1 ? 21 ? P05067 687 ? 707 ? 1 21 3 1 7U4P C 1 ? 21 ? P05067 687 ? 707 ? 1 21 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7U4P ORN A 1 ? UNP P05067 LYS 687 conflict 1 1 1 7U4P CYS A 2 ? UNP P05067 LEU 688 conflict 2 2 1 7U4P CYS A 6 ? UNP P05067 ALA 692 conflict 6 3 1 7U4P ORN A 20 ? UNP P05067 MET 706 conflict 20 4 2 7U4P ORN B 1 ? UNP P05067 LYS 687 conflict 1 5 2 7U4P CYS B 2 ? UNP P05067 LEU 688 conflict 2 6 2 7U4P CYS B 6 ? UNP P05067 ALA 692 conflict 6 7 2 7U4P ORN B 20 ? UNP P05067 MET 706 conflict 20 8 3 7U4P ORN C 1 ? UNP P05067 LYS 687 conflict 1 9 3 7U4P CYS C 2 ? UNP P05067 LEU 688 conflict 2 10 3 7U4P CYS C 6 ? UNP P05067 ALA 692 conflict 6 11 3 7U4P ORN C 20 ? UNP P05067 MET 706 conflict 20 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10630 ? 1 MORE -48 ? 1 'SSA (A^2)' 13570 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'assay for oligomerization' _pdbx_struct_assembly_auth_evidence.details SDS-PAGE # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 31.0270000000 0.0000000000 -1.0000000000 0.0000000000 53.7403404064 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 7_556 y,x,-z+5/3 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 79.7316666667 4 'crystal symmetry operation' 10_666 -y+1,-x+1,-z+5/3 0.5000000000 -0.8660254038 0.0000000000 31.0270000000 -0.8660254038 -0.5000000000 0.0000000000 53.7403404064 0.0000000000 0.0000000000 -1.0000000000 79.7316666667 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 C CYS 6 SG ? ? A CYS 2 C CYS 6 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 6 SG ? ? ? 1_555 B CYS 2 SG ? ? A CYS 6 B CYS 2 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? B CYS 6 SG ? ? ? 1_555 C CYS 2 SG ? ? B CYS 6 C CYS 2 1_555 ? ? ? ? ? ? ? 2.019 ? ? covale1 covale both ? A ORN 1 C ? ? ? 1_555 A CYS 2 N ? ? A ORN 1 A CYS 2 1_555 ? ? ? ? ? ? ? 1.373 ? ? covale2 covale both ? A ORN 1 NE ? ? ? 1_555 A VAL 21 C ? ? A ORN 1 A VAL 21 1_555 ? ? ? ? ? ? ? 1.376 ? ? covale3 covale both ? A PHE 4 C ? ? ? 1_555 A MEA 5 N ? ? A PHE 4 A MEA 5 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A MEA 5 C ? ? ? 1_555 A CYS 6 N ? ? A MEA 5 A CYS 6 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A LEU 19 C ? ? ? 1_555 A ORN 20 N ? ? A LEU 19 A ORN 20 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale both ? A ORN 20 C ? ? ? 1_555 A VAL 21 N ? ? A ORN 20 A VAL 21 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? B ORN 1 C ? ? ? 1_555 B CYS 2 N ? ? B ORN 1 B CYS 2 1_555 ? ? ? ? ? ? ? 1.370 ? ? covale8 covale both ? B ORN 1 NE ? ? ? 1_555 B VAL 21 C ? ? B ORN 1 B VAL 21 1_555 ? ? ? ? ? ? ? 1.375 ? ? covale9 covale both ? B PHE 4 C ? ? ? 1_555 B MEA 5 N ? ? B PHE 4 B MEA 5 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale10 covale both ? B MEA 5 C ? ? ? 1_555 B CYS 6 N ? ? B MEA 5 B CYS 6 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale11 covale both ? B LEU 19 C ? ? ? 1_555 B ORN 20 N ? ? B LEU 19 B ORN 20 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale12 covale both ? B ORN 20 C ? ? ? 1_555 B VAL 21 N ? ? B ORN 20 B VAL 21 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale13 covale both ? C ORN 1 C ? ? ? 1_555 C CYS 2 N ? ? C ORN 1 C CYS 2 1_555 ? ? ? ? ? ? ? 1.376 ? ? covale14 covale both ? C ORN 1 NE ? ? ? 1_555 C VAL 21 C ? ? C ORN 1 C VAL 21 1_555 ? ? ? ? ? ? ? 1.378 ? ? covale15 covale both ? C PHE 4 C ? ? ? 1_555 C MEA 5 N ? ? C PHE 4 C MEA 5 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale16 covale both ? C MEA 5 C ? ? ? 1_555 C CYS 6 N ? ? C MEA 5 C CYS 6 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale17 covale both ? C LEU 19 C ? ? ? 1_555 C ORN 20 N ? ? C LEU 19 C ORN 20 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale18 covale both ? C ORN 20 C ? ? ? 1_555 C VAL 21 N ? ? C ORN 20 C VAL 21 1_555 ? ? ? ? ? ? ? 1.327 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 1 3 ? anti-parallel AA1 1 5 ? anti-parallel AA1 3 4 ? anti-parallel AA1 3 5 ? anti-parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 2 ? GLU A 7 ? CYS A 2 GLU A 7 AA1 2 ILE A 16 ? VAL A 21 ? ILE A 16 VAL A 21 AA1 3 CYS B 2 ? GLU B 7 ? CYS B 2 GLU B 7 AA1 4 ILE B 16 ? VAL B 21 ? ILE B 16 VAL B 21 AA1 5 CYS C 2 ? GLU C 7 ? CYS C 2 GLU C 7 AA1 6 ILE C 16 ? VAL C 21 ? ILE C 16 VAL C 21 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N CYS A 2 ? N CYS A 2 O VAL A 21 ? O VAL A 21 AA1 1 3 N MEA A 5 ? N MEA A 5 O VAL B 3 ? O VAL B 3 AA1 1 5 N VAL A 3 ? N VAL A 3 O MEA C 5 ? O MEA C 5 AA1 3 4 N CYS B 2 ? N CYS B 2 O VAL B 21 ? O VAL B 21 AA1 3 5 N MEA B 5 ? N MEA B 5 O VAL C 3 ? O VAL C 3 AA1 5 6 N PHE C 4 ? N PHE C 4 O LEU C 19 ? O LEU C 19 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 104 ? ? O B HOH 107 ? ? 1.94 2 1 O B HOH 108 ? ? O C HOH 110 ? ? 2.09 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 HZ1 B LYS 13 ? ? 1_555 OD1 C ASP 8 ? ? 7_556 1.58 2 1 OG A SER 11 ? ? 1_555 O C ASN 12 ? ? 9_667 1.91 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MEA 5 A MEA 5 ? PHE 'modified residue' 2 B MEA 5 B MEA 5 ? PHE 'modified residue' 3 C MEA 5 C MEA 5 ? PHE 'modified residue' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 103 ? E HOH . 2 1 B HOH 109 ? E HOH . 3 1 C HOH 101 ? F HOH . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 7.666 28.603 50.304 0.3066 0.3783 0.3145 0.0555 0.0704 0.0558 4.6764 6.8632 9.5415 -5.4524 6.3226 -8.1508 -0.3295 0.3768 -0.1569 -0.3967 0.1108 0.4569 0.1619 -0.0740 0.0866 'X-RAY DIFFRACTION' 2 ? refined 6.253 39.613 48.167 0.4773 0.3751 0.3869 0.0181 0.0251 -0.0580 6.8387 5.9419 5.6383 -3.7925 2.9096 -5.7454 -0.0354 0.0285 -0.2140 -0.1302 0.4716 0.1839 1.0884 -1.1147 -0.0970 'X-RAY DIFFRACTION' 3 ? refined 2.920 24.521 42.391 0.3195 0.2492 0.3415 0.0016 -0.0074 0.0270 7.9416 4.5948 9.8282 -2.7826 -1.7070 6.4980 0.1909 -0.1329 -0.0352 -0.1567 -0.5004 0.5735 0.3012 0.7667 0.0941 'X-RAY DIFFRACTION' 4 ? refined 1.087 17.363 32.934 0.4615 0.4902 0.6012 0.0047 -0.0823 -0.0736 6.6834 3.1430 4.9938 -1.4151 -2.9945 3.1506 0.4389 -0.2613 -0.0134 0.6122 -2.5543 0.6552 -0.7185 0.1453 -1.4559 'X-RAY DIFFRACTION' 5 ? refined 8.557 19.913 49.098 0.3276 0.4803 0.4129 -0.0520 -0.0191 0.0817 1.8905 7.3794 2.4870 1.1429 1.9335 -0.1118 -1.3116 0.5645 0.7321 -0.2785 -0.4366 0.0504 0.0126 -1.9307 0.4615 'X-RAY DIFFRACTION' 6 ? refined 15.266 15.725 54.047 0.5417 0.5940 0.5421 0.0076 -0.1266 0.3190 3.0800 7.4735 4.3176 -3.1120 -2.5222 -0.5350 0.2982 0.0656 -0.3139 -1.7993 -1.9447 -0.8953 1.4142 1.5215 0.2326 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 8 '( CHAIN A AND RESID 1:8 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 9 A 19 '( CHAIN A AND ( RESID 9:19 OR RESID 20:20 ) )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 2 A 20 A 20 '( CHAIN A AND ( RESID 9:19 OR RESID 20:20 ) )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 3 B 1 B 8 '( CHAIN B AND RESID 1:8 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 4 B 9 B 19 '( CHAIN B AND ( RESID 9:19 OR RESID 20:20 ) )' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 4 B 20 B 20 '( CHAIN B AND ( RESID 9:19 OR RESID 20:20 ) )' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 5 C 3 C 8 '( CHAIN C AND RESID 3:8 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 6 C 9 C 21 '( CHAIN C AND RESID 9:21 )' ? ? ? ? ? # _pdbx_entry_details.entry_id 7U4P _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 CYS N N N N 47 CYS CA C N R 48 CYS C C N N 49 CYS O O N N 50 CYS CB C N N 51 CYS SG S N N 52 CYS OXT O N N 53 CYS H H N N 54 CYS H2 H N N 55 CYS HA H N N 56 CYS HB2 H N N 57 CYS HB3 H N N 58 CYS HG H N N 59 CYS HXT H N N 60 GLU N N N N 61 GLU CA C N S 62 GLU C C N N 63 GLU O O N N 64 GLU CB C N N 65 GLU CG C N N 66 GLU CD C N N 67 GLU OE1 O N N 68 GLU OE2 O N N 69 GLU OXT O N N 70 GLU H H N N 71 GLU H2 H N N 72 GLU HA H N N 73 GLU HB2 H N N 74 GLU HB3 H N N 75 GLU HG2 H N N 76 GLU HG3 H N N 77 GLU HE2 H N N 78 GLU HXT H N N 79 GLY N N N N 80 GLY CA C N N 81 GLY C C N N 82 GLY O O N N 83 GLY OXT O N N 84 GLY H H N N 85 GLY H2 H N N 86 GLY HA2 H N N 87 GLY HA3 H N N 88 GLY HXT H N N 89 HOH O O N N 90 HOH H1 H N N 91 HOH H2 H N N 92 ILE N N N N 93 ILE CA C N S 94 ILE C C N N 95 ILE O O N N 96 ILE CB C N S 97 ILE CG1 C N N 98 ILE CG2 C N N 99 ILE CD1 C N N 100 ILE OXT O N N 101 ILE H H N N 102 ILE H2 H N N 103 ILE HA H N N 104 ILE HB H N N 105 ILE HG12 H N N 106 ILE HG13 H N N 107 ILE HG21 H N N 108 ILE HG22 H N N 109 ILE HG23 H N N 110 ILE HD11 H N N 111 ILE HD12 H N N 112 ILE HD13 H N N 113 ILE HXT H N N 114 LEU N N N N 115 LEU CA C N S 116 LEU C C N N 117 LEU O O N N 118 LEU CB C N N 119 LEU CG C N N 120 LEU CD1 C N N 121 LEU CD2 C N N 122 LEU OXT O N N 123 LEU H H N N 124 LEU H2 H N N 125 LEU HA H N N 126 LEU HB2 H N N 127 LEU HB3 H N N 128 LEU HG H N N 129 LEU HD11 H N N 130 LEU HD12 H N N 131 LEU HD13 H N N 132 LEU HD21 H N N 133 LEU HD22 H N N 134 LEU HD23 H N N 135 LEU HXT H N N 136 LYS N N N N 137 LYS CA C N S 138 LYS C C N N 139 LYS O O N N 140 LYS CB C N N 141 LYS CG C N N 142 LYS CD C N N 143 LYS CE C N N 144 LYS NZ N N N 145 LYS OXT O N N 146 LYS H H N N 147 LYS H2 H N N 148 LYS HA H N N 149 LYS HB2 H N N 150 LYS HB3 H N N 151 LYS HG2 H N N 152 LYS HG3 H N N 153 LYS HD2 H N N 154 LYS HD3 H N N 155 LYS HE2 H N N 156 LYS HE3 H N N 157 LYS HZ1 H N N 158 LYS HZ2 H N N 159 LYS HZ3 H N N 160 LYS HXT H N N 161 MEA C1 C N N 162 MEA N N N N 163 MEA CA C N S 164 MEA C C N N 165 MEA O O N N 166 MEA CB C N N 167 MEA CG C Y N 168 MEA CD1 C Y N 169 MEA CE1 C Y N 170 MEA CZ C Y N 171 MEA CE2 C Y N 172 MEA CD2 C Y N 173 MEA OXT O N N 174 MEA HC1 H N N 175 MEA HC2 H N N 176 MEA HC3 H N N 177 MEA H H N N 178 MEA HA H N N 179 MEA HB1 H N N 180 MEA HB2 H N N 181 MEA HD1 H N N 182 MEA HE1 H N N 183 MEA HZ H N N 184 MEA HE2 H N N 185 MEA HD2 H N N 186 MEA HXT H N N 187 MET N N N N 188 MET CA C N S 189 MET C C N N 190 MET O O N N 191 MET CB C N N 192 MET CG C N N 193 MET SD S N N 194 MET CE C N N 195 MET OXT O N N 196 MET H H N N 197 MET H2 H N N 198 MET HA H N N 199 MET HB2 H N N 200 MET HB3 H N N 201 MET HG2 H N N 202 MET HG3 H N N 203 MET HE1 H N N 204 MET HE2 H N N 205 MET HE3 H N N 206 MET HXT H N N 207 ORN N N N N 208 ORN CA C N S 209 ORN CB C N N 210 ORN CG C N N 211 ORN CD C N N 212 ORN NE N N N 213 ORN C C N N 214 ORN O O N N 215 ORN OXT O N N 216 ORN H H N N 217 ORN H2 H N N 218 ORN HA H N N 219 ORN HB2 H N N 220 ORN HB3 H N N 221 ORN HG2 H N N 222 ORN HG3 H N N 223 ORN HD2 H N N 224 ORN HD3 H N N 225 ORN HE1 H N N 226 ORN HE2 H N N 227 ORN HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 SER N N N N 252 SER CA C N S 253 SER C C N N 254 SER O O N N 255 SER CB C N N 256 SER OG O N N 257 SER OXT O N N 258 SER H H N N 259 SER H2 H N N 260 SER HA H N N 261 SER HB2 H N N 262 SER HB3 H N N 263 SER HG H N N 264 SER HXT H N N 265 VAL N N N N 266 VAL CA C N S 267 VAL C C N N 268 VAL O O N N 269 VAL CB C N N 270 VAL CG1 C N N 271 VAL CG2 C N N 272 VAL OXT O N N 273 VAL H H N N 274 VAL H2 H N N 275 VAL HA H N N 276 VAL HB H N N 277 VAL HG11 H N N 278 VAL HG12 H N N 279 VAL HG13 H N N 280 VAL HG21 H N N 281 VAL HG22 H N N 282 VAL HG23 H N N 283 VAL HXT H N N 284 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 CYS N CA sing N N 44 CYS N H sing N N 45 CYS N H2 sing N N 46 CYS CA C sing N N 47 CYS CA CB sing N N 48 CYS CA HA sing N N 49 CYS C O doub N N 50 CYS C OXT sing N N 51 CYS CB SG sing N N 52 CYS CB HB2 sing N N 53 CYS CB HB3 sing N N 54 CYS SG HG sing N N 55 CYS OXT HXT sing N N 56 GLU N CA sing N N 57 GLU N H sing N N 58 GLU N H2 sing N N 59 GLU CA C sing N N 60 GLU CA CB sing N N 61 GLU CA HA sing N N 62 GLU C O doub N N 63 GLU C OXT sing N N 64 GLU CB CG sing N N 65 GLU CB HB2 sing N N 66 GLU CB HB3 sing N N 67 GLU CG CD sing N N 68 GLU CG HG2 sing N N 69 GLU CG HG3 sing N N 70 GLU CD OE1 doub N N 71 GLU CD OE2 sing N N 72 GLU OE2 HE2 sing N N 73 GLU OXT HXT sing N N 74 GLY N CA sing N N 75 GLY N H sing N N 76 GLY N H2 sing N N 77 GLY CA C sing N N 78 GLY CA HA2 sing N N 79 GLY CA HA3 sing N N 80 GLY C O doub N N 81 GLY C OXT sing N N 82 GLY OXT HXT sing N N 83 HOH O H1 sing N N 84 HOH O H2 sing N N 85 ILE N CA sing N N 86 ILE N H sing N N 87 ILE N H2 sing N N 88 ILE CA C sing N N 89 ILE CA CB sing N N 90 ILE CA HA sing N N 91 ILE C O doub N N 92 ILE C OXT sing N N 93 ILE CB CG1 sing N N 94 ILE CB CG2 sing N N 95 ILE CB HB sing N N 96 ILE CG1 CD1 sing N N 97 ILE CG1 HG12 sing N N 98 ILE CG1 HG13 sing N N 99 ILE CG2 HG21 sing N N 100 ILE CG2 HG22 sing N N 101 ILE CG2 HG23 sing N N 102 ILE CD1 HD11 sing N N 103 ILE CD1 HD12 sing N N 104 ILE CD1 HD13 sing N N 105 ILE OXT HXT sing N N 106 LEU N CA sing N N 107 LEU N H sing N N 108 LEU N H2 sing N N 109 LEU CA C sing N N 110 LEU CA CB sing N N 111 LEU CA HA sing N N 112 LEU C O doub N N 113 LEU C OXT sing N N 114 LEU CB CG sing N N 115 LEU CB HB2 sing N N 116 LEU CB HB3 sing N N 117 LEU CG CD1 sing N N 118 LEU CG CD2 sing N N 119 LEU CG HG sing N N 120 LEU CD1 HD11 sing N N 121 LEU CD1 HD12 sing N N 122 LEU CD1 HD13 sing N N 123 LEU CD2 HD21 sing N N 124 LEU CD2 HD22 sing N N 125 LEU CD2 HD23 sing N N 126 LEU OXT HXT sing N N 127 LYS N CA sing N N 128 LYS N H sing N N 129 LYS N H2 sing N N 130 LYS CA C sing N N 131 LYS CA CB sing N N 132 LYS CA HA sing N N 133 LYS C O doub N N 134 LYS C OXT sing N N 135 LYS CB CG sing N N 136 LYS CB HB2 sing N N 137 LYS CB HB3 sing N N 138 LYS CG CD sing N N 139 LYS CG HG2 sing N N 140 LYS CG HG3 sing N N 141 LYS CD CE sing N N 142 LYS CD HD2 sing N N 143 LYS CD HD3 sing N N 144 LYS CE NZ sing N N 145 LYS CE HE2 sing N N 146 LYS CE HE3 sing N N 147 LYS NZ HZ1 sing N N 148 LYS NZ HZ2 sing N N 149 LYS NZ HZ3 sing N N 150 LYS OXT HXT sing N N 151 MEA C1 N sing N N 152 MEA C1 HC1 sing N N 153 MEA C1 HC2 sing N N 154 MEA C1 HC3 sing N N 155 MEA N CA sing N N 156 MEA N H sing N N 157 MEA CA C sing N N 158 MEA CA CB sing N N 159 MEA CA HA sing N N 160 MEA C O doub N N 161 MEA C OXT sing N N 162 MEA CB CG sing N N 163 MEA CB HB1 sing N N 164 MEA CB HB2 sing N N 165 MEA CG CD1 doub Y N 166 MEA CG CD2 sing Y N 167 MEA CD1 CE1 sing Y N 168 MEA CD1 HD1 sing N N 169 MEA CE1 CZ doub Y N 170 MEA CE1 HE1 sing N N 171 MEA CZ CE2 sing Y N 172 MEA CZ HZ sing N N 173 MEA CE2 CD2 doub Y N 174 MEA CE2 HE2 sing N N 175 MEA CD2 HD2 sing N N 176 MEA OXT HXT sing N N 177 MET N CA sing N N 178 MET N H sing N N 179 MET N H2 sing N N 180 MET CA C sing N N 181 MET CA CB sing N N 182 MET CA HA sing N N 183 MET C O doub N N 184 MET C OXT sing N N 185 MET CB CG sing N N 186 MET CB HB2 sing N N 187 MET CB HB3 sing N N 188 MET CG SD sing N N 189 MET CG HG2 sing N N 190 MET CG HG3 sing N N 191 MET SD CE sing N N 192 MET CE HE1 sing N N 193 MET CE HE2 sing N N 194 MET CE HE3 sing N N 195 MET OXT HXT sing N N 196 ORN N CA sing N N 197 ORN N H sing N N 198 ORN N H2 sing N N 199 ORN CA CB sing N N 200 ORN CA C sing N N 201 ORN CA HA sing N N 202 ORN CB CG sing N N 203 ORN CB HB2 sing N N 204 ORN CB HB3 sing N N 205 ORN CG CD sing N N 206 ORN CG HG2 sing N N 207 ORN CG HG3 sing N N 208 ORN CD NE sing N N 209 ORN CD HD2 sing N N 210 ORN CD HD3 sing N N 211 ORN NE HE1 sing N N 212 ORN NE HE2 sing N N 213 ORN C O doub N N 214 ORN C OXT sing N N 215 ORN OXT HXT sing N N 216 PHE N CA sing N N 217 PHE N H sing N N 218 PHE N H2 sing N N 219 PHE CA C sing N N 220 PHE CA CB sing N N 221 PHE CA HA sing N N 222 PHE C O doub N N 223 PHE C OXT sing N N 224 PHE CB CG sing N N 225 PHE CB HB2 sing N N 226 PHE CB HB3 sing N N 227 PHE CG CD1 doub Y N 228 PHE CG CD2 sing Y N 229 PHE CD1 CE1 sing Y N 230 PHE CD1 HD1 sing N N 231 PHE CD2 CE2 doub Y N 232 PHE CD2 HD2 sing N N 233 PHE CE1 CZ doub Y N 234 PHE CE1 HE1 sing N N 235 PHE CE2 CZ sing Y N 236 PHE CE2 HE2 sing N N 237 PHE CZ HZ sing N N 238 PHE OXT HXT sing N N 239 SER N CA sing N N 240 SER N H sing N N 241 SER N H2 sing N N 242 SER CA C sing N N 243 SER CA CB sing N N 244 SER CA HA sing N N 245 SER C O doub N N 246 SER C OXT sing N N 247 SER CB OG sing N N 248 SER CB HB2 sing N N 249 SER CB HB3 sing N N 250 SER OG HG sing N N 251 SER OXT HXT sing N N 252 VAL N CA sing N N 253 VAL N H sing N N 254 VAL N H2 sing N N 255 VAL CA C sing N N 256 VAL CA CB sing N N 257 VAL CA HA sing N N 258 VAL C O doub N N 259 VAL C OXT sing N N 260 VAL CB CG1 sing N N 261 VAL CB CG2 sing N N 262 VAL CB HB sing N N 263 VAL CG1 HG11 sing N N 264 VAL CG1 HG12 sing N N 265 VAL CG1 HG13 sing N N 266 VAL CG2 HG21 sing N N 267 VAL CG2 HG22 sing N N 268 VAL CG2 HG23 sing N N 269 VAL OXT HXT sing N N 270 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute on Aging (NIH/NIA)' 'United States' 1RF1AG062296-01 1 'National Institutes of Health/National Institute on Aging (NIH/NIA)' 'United States' 1RF1AG072587-01 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7JXO _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7U4P _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.016115 _atom_sites.fract_transf_matrix[1][2] 0.009304 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018608 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020903 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ # loop_ #