HEADER CHAPERONE 09-MAR-22 7U8X TITLE HTRAP1 WITH INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK PROTEIN 75 KDA, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HSP 75,TNFR-ASSOCIATED PROTEIN 1,TUMOR NECROSIS FACTOR TYPE COMPND 5 1 RECEPTOR-ASSOCIATED PROTEIN,TRAP-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRAP1, HSP75; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HTRAP1, INHIBITOR, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR J.DENG,R.MATTS,S.PENG REVDAT 1 16-AUG-23 7U8X 0 JRNL AUTH T.MERFELD,S.PENG,B.M.KEEGAN,V.M.CROWLEY,C.M.BRACKETT, JRNL AUTH 2 A.GUTIERREZ,N.R.MCCANN,T.S.REYNOLDS,M.C.RHODES,K.M.BYRD, JRNL AUTH 3 J.DENG,R.L.MATTS,B.S.J.BLAGG JRNL TITL ELUCIDATION OF NOVEL TRAP1-SELECTIVE INHIBITORS THAT JRNL TITL 2 REGULATE MITOCHONDRIAL PROCESSES. JRNL REF EUR.J.MED.CHEM. V. 258 15531 2023 JRNL REFN ISSN 0223-5234 JRNL PMID 37307624 JRNL DOI 10.1016/J.EJMECH.2023.115531 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 70085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7000 - 3.8555 1.00 5222 154 0.1748 0.1889 REMARK 3 2 3.8555 - 3.0605 1.00 5012 147 0.1734 0.1820 REMARK 3 3 3.0605 - 2.6736 1.00 4950 145 0.1929 0.2336 REMARK 3 4 2.6736 - 2.4292 1.00 4923 144 0.1943 0.2206 REMARK 3 5 2.4292 - 2.2551 1.00 4909 145 0.1945 0.2194 REMARK 3 6 2.2551 - 2.1221 1.00 4864 142 0.1914 0.2218 REMARK 3 7 2.1221 - 2.0159 1.00 4861 143 0.1941 0.2195 REMARK 3 8 2.0159 - 1.9281 1.00 4884 143 0.1906 0.2211 REMARK 3 9 1.9281 - 1.8539 1.00 4837 143 0.2113 0.2595 REMARK 3 10 1.8539 - 1.7899 0.99 4800 141 0.2225 0.2652 REMARK 3 11 1.7899 - 1.7339 0.99 4789 140 0.2350 0.2806 REMARK 3 12 1.7339 - 1.6844 0.99 4794 141 0.2463 0.3075 REMARK 3 13 1.6844 - 1.6400 0.98 4733 139 0.2806 0.3510 REMARK 3 14 1.6400 - 1.6000 0.93 4508 132 0.2982 0.3308 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3710 REMARK 3 ANGLE : 0.897 5004 REMARK 3 CHIRALITY : 0.059 540 REMARK 3 PLANARITY : 0.005 628 REMARK 3 DIHEDRAL : 15.072 2217 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 70:103) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6490 108.6363 213.1513 REMARK 3 T TENSOR REMARK 3 T11: 0.4559 T22: 0.3111 REMARK 3 T33: 0.2756 T12: -0.0083 REMARK 3 T13: -0.0074 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 1.3433 L22: 2.4389 REMARK 3 L33: 3.1798 L12: -0.3921 REMARK 3 L13: 0.1258 L23: 0.9562 REMARK 3 S TENSOR REMARK 3 S11: 0.1130 S12: 0.1644 S13: 0.0504 REMARK 3 S21: -0.4023 S22: -0.0092 S23: -0.1284 REMARK 3 S31: -0.6676 S32: 0.3315 S33: -0.0584 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 104:170) REMARK 3 ORIGIN FOR THE GROUP (A): 43.0159 96.8324 219.1244 REMARK 3 T TENSOR REMARK 3 T11: 0.2347 T22: 0.1612 REMARK 3 T33: 0.2044 T12: -0.0135 REMARK 3 T13: 0.0025 T23: 0.0181 REMARK 3 L TENSOR REMARK 3 L11: 3.8291 L22: 4.1946 REMARK 3 L33: 3.5456 L12: -0.3051 REMARK 3 L13: 1.1593 L23: -0.5788 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: 0.0879 S13: 0.0971 REMARK 3 S21: -0.1042 S22: 0.0310 S23: -0.3010 REMARK 3 S31: 0.0764 S32: 0.1708 S33: -0.0343 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 171:204) REMARK 3 ORIGIN FOR THE GROUP (A): 48.8230 101.5415 211.2530 REMARK 3 T TENSOR REMARK 3 T11: 0.7553 T22: 0.6923 REMARK 3 T33: 0.4846 T12: -0.1269 REMARK 3 T13: 0.0459 T23: -0.0914 REMARK 3 L TENSOR REMARK 3 L11: 1.5581 L22: 7.9171 REMARK 3 L33: 2.0291 L12: 0.3966 REMARK 3 L13: -1.4105 L23: -1.7227 REMARK 3 S TENSOR REMARK 3 S11: 0.1086 S12: -0.0778 S13: 0.0228 REMARK 3 S21: -0.1585 S22: 0.1946 S23: -1.1728 REMARK 3 S31: 0.0400 S32: 0.8765 S33: -0.0822 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 205:275) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0863 103.5469 215.0375 REMARK 3 T TENSOR REMARK 3 T11: 0.2503 T22: 0.2166 REMARK 3 T33: 0.1941 T12: -0.0217 REMARK 3 T13: -0.0087 T23: 0.0216 REMARK 3 L TENSOR REMARK 3 L11: 1.8057 L22: 6.6158 REMARK 3 L33: 3.5934 L12: 0.2356 REMARK 3 L13: 0.6475 L23: 0.3153 REMARK 3 S TENSOR REMARK 3 S11: -0.1798 S12: 0.1259 S13: 0.0651 REMARK 3 S21: -0.3378 S22: 0.2232 S23: 0.0694 REMARK 3 S31: -0.2904 S32: -0.0325 S33: -0.0357 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 276:302) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2885 83.0315 219.1666 REMARK 3 T TENSOR REMARK 3 T11: 0.3497 T22: 0.2146 REMARK 3 T33: 0.2623 T12: -0.0471 REMARK 3 T13: -0.0250 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 2.3094 L22: 5.1971 REMARK 3 L33: 2.9475 L12: -3.4152 REMARK 3 L13: -2.0663 L23: 2.3756 REMARK 3 S TENSOR REMARK 3 S11: -0.2748 S12: -0.0819 S13: -0.2609 REMARK 3 S21: -0.1162 S22: 0.2041 S23: 0.3460 REMARK 3 S31: 0.1615 S32: -0.0304 S33: 0.0812 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 303:350) REMARK 3 ORIGIN FOR THE GROUP (A): 51.8062 68.6822 213.2793 REMARK 3 T TENSOR REMARK 3 T11: 0.2682 T22: 0.2598 REMARK 3 T33: 0.1913 T12: -0.0369 REMARK 3 T13: 0.0109 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 2.3319 L22: 4.0172 REMARK 3 L33: 4.8921 L12: -1.3939 REMARK 3 L13: -0.9260 L23: 0.8413 REMARK 3 S TENSOR REMARK 3 S11: -0.0952 S12: -0.1495 S13: -0.0639 REMARK 3 S21: 0.0872 S22: 0.0035 S23: -0.0056 REMARK 3 S31: -0.0449 S32: -0.2549 S33: 0.0649 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 351:362) REMARK 3 ORIGIN FOR THE GROUP (A): 44.3229 63.1673 197.2345 REMARK 3 T TENSOR REMARK 3 T11: 0.4644 T22: 1.0700 REMARK 3 T33: 1.2983 T12: -0.1775 REMARK 3 T13: 0.0963 T23: -0.6266 REMARK 3 L TENSOR REMARK 3 L11: 3.2820 L22: 2.9034 REMARK 3 L33: 4.6429 L12: -0.4522 REMARK 3 L13: -0.4442 L23: -1.8953 REMARK 3 S TENSOR REMARK 3 S11: 0.1843 S12: 0.9666 S13: -1.2828 REMARK 3 S21: -0.2367 S22: -0.2408 S23: 0.7707 REMARK 3 S31: 0.3323 S32: -0.4815 S33: 0.0506 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 363:379) REMARK 3 ORIGIN FOR THE GROUP (A): 47.3473 80.5452 205.1622 REMARK 3 T TENSOR REMARK 3 T11: 0.4634 T22: 0.3578 REMARK 3 T33: 0.2847 T12: 0.0184 REMARK 3 T13: -0.0181 T23: -0.0196 REMARK 3 L TENSOR REMARK 3 L11: 6.8783 L22: 5.5294 REMARK 3 L33: 5.4099 L12: -3.4683 REMARK 3 L13: -4.5940 L23: -0.6435 REMARK 3 S TENSOR REMARK 3 S11: 0.3393 S12: 0.7760 S13: 0.0154 REMARK 3 S21: -0.4496 S22: -0.3488 S23: 0.1217 REMARK 3 S31: 0.2923 S32: -0.7801 S33: -0.1129 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 380:406) REMARK 3 ORIGIN FOR THE GROUP (A): 52.4479 75.1843 201.9780 REMARK 3 T TENSOR REMARK 3 T11: 0.3068 T22: 0.2366 REMARK 3 T33: 0.2149 T12: 0.0074 REMARK 3 T13: -0.0102 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 3.5291 L22: 5.0193 REMARK 3 L33: 4.2440 L12: -0.8902 REMARK 3 L13: -1.1181 L23: 1.6908 REMARK 3 S TENSOR REMARK 3 S11: 0.1449 S12: 0.1012 S13: 0.3664 REMARK 3 S21: -0.2928 S22: -0.1238 S23: 0.1283 REMARK 3 S31: -0.5441 S32: -0.0855 S33: 0.0275 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 407:434) REMARK 3 ORIGIN FOR THE GROUP (A): 61.4233 70.6185 202.7577 REMARK 3 T TENSOR REMARK 3 T11: 0.2930 T22: 0.2606 REMARK 3 T33: 0.2034 T12: -0.0563 REMARK 3 T13: -0.0083 T23: -0.0409 REMARK 3 L TENSOR REMARK 3 L11: 4.8773 L22: 3.2775 REMARK 3 L33: 5.7642 L12: -3.0902 REMARK 3 L13: 0.6827 L23: -2.6906 REMARK 3 S TENSOR REMARK 3 S11: 0.0514 S12: 0.0257 S13: 0.3684 REMARK 3 S21: 0.0560 S22: -0.1235 S23: -0.4219 REMARK 3 S31: -0.3969 S32: 0.2935 S33: 0.0342 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 435:459) REMARK 3 ORIGIN FOR THE GROUP (A): 58.4706 59.7580 196.9639 REMARK 3 T TENSOR REMARK 3 T11: 0.2273 T22: 0.1987 REMARK 3 T33: 0.1909 T12: -0.0182 REMARK 3 T13: -0.0165 T23: -0.0562 REMARK 3 L TENSOR REMARK 3 L11: 4.5991 L22: 4.3545 REMARK 3 L33: 8.5757 L12: -0.2274 REMARK 3 L13: -2.5994 L23: -0.9564 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: 0.0175 S13: -0.0057 REMARK 3 S21: -0.0715 S22: 0.0614 S23: 0.0629 REMARK 3 S31: 0.2209 S32: -0.1431 S33: -0.0248 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 460:552) REMARK 3 ORIGIN FOR THE GROUP (A): 69.6216 50.1354 190.7952 REMARK 3 T TENSOR REMARK 3 T11: 0.2304 T22: 0.2933 REMARK 3 T33: 0.1922 T12: -0.0110 REMARK 3 T13: 0.0057 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 2.4130 L22: 2.6224 REMARK 3 L33: 2.4506 L12: -1.1906 REMARK 3 L13: -0.9923 L23: 0.1417 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: -0.1009 S13: -0.1088 REMARK 3 S21: -0.0281 S22: -0.0630 S23: -0.0628 REMARK 3 S31: 0.1553 S32: 0.2308 S33: 0.0225 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7U8X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAR-22. REMARK 100 THE DEPOSITION ID IS D_1000263743. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70222 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.0280 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.90800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.622 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5HPH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1% W/V TRYPTONE, 0.05M HEPESNA PH7.0, REMARK 280 12%PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.87900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.54400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.43150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 91.54400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.87900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.43150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 172 REMARK 465 GLY A 173 REMARK 465 THR A 174 REMARK 465 ILE A 175 REMARK 465 ALA A 176 REMARK 465 ARG A 177 REMARK 465 SER A 178 REMARK 465 GLY A 179 REMARK 465 SER A 180 REMARK 465 LYS A 181 REMARK 465 ALA A 182 REMARK 465 PHE A 183 REMARK 465 LEU A 184 REMARK 465 ASP A 185 REMARK 465 ALA A 186 REMARK 465 LEU A 187 REMARK 465 GLN A 188 REMARK 465 ASN A 189 REMARK 465 GLN A 190 REMARK 465 ALA A 191 REMARK 465 GLU A 192 REMARK 465 ALA A 193 REMARK 465 SER A 194 REMARK 465 SER A 195 REMARK 465 LYS A 196 REMARK 465 ILE A 197 REMARK 465 ILE A 198 REMARK 465 GLY A 199 REMARK 465 SER A 351 REMARK 465 SER A 356 REMARK 465 ARG A 357 REMARK 465 GLU A 358 REMARK 465 LEU A 359 REMARK 465 GLY A 360 REMARK 465 SER A 361 REMARK 465 LEU A 398 REMARK 465 ASN A 399 REMARK 465 LEU A 400 REMARK 465 SER A 401 REMARK 465 ARG A 402 REMARK 465 GLU A 403 REMARK 465 LEU A 404 REMARK 465 LEU A 405 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 91 CD OE1 NE2 REMARK 480 GLU A 93 CD OE1 OE2 REMARK 480 LYS A 96 CD CE NZ REMARK 480 LEU A 97 CG CD1 CD2 REMARK 480 SER A 104 OG REMARK 480 LEU A 105 CB CG CD1 CD2 REMARK 480 TYR A 106 C CB CG CD1 CD2 CE1 CE2 REMARK 480 TYR A 106 CZ OH REMARK 480 SER A 107 CB OG REMARK 480 GLU A 108 CG CD OE1 OE2 REMARK 480 GLU A 150 CD OE1 OE2 REMARK 480 LYS A 151 CE NZ REMARK 480 GLU A 166 CD OE1 OE2 REMARK 480 LYS A 304 CE NZ REMARK 480 MET A 352 SD CE REMARK 480 PHE A 353 CG CD1 CD2 CE1 CE2 CZ REMARK 480 LYS A 375 CD CE NZ REMARK 480 THR A 377 CB OG1 CG2 REMARK 480 ASP A 378 CG OD1 OD2 REMARK 480 GLU A 407 CG CD OE1 OE2 REMARK 480 LYS A 413 CE NZ REMARK 480 LYS A 431 CE NZ REMARK 480 LYS A 432 CE NZ REMARK 480 GLU A 435 CD OE1 OE2 REMARK 480 LYS A 439 CE NZ REMARK 480 LYS A 544 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 511 OE2 GLU A 551 2.11 REMARK 500 CG2 THR A 377 O HOH A 747 2.13 REMARK 500 OE1 GLN A 406 O HOH A 701 2.18 REMARK 500 OE1 GLU A 140 O HOH A 702 2.19 REMARK 500 O HOH A 876 O HOH A 933 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 397 C - N - CA ANGL. DEV. = 13.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 236 -165.63 -72.07 REMARK 500 ASP A 378 8.49 85.19 REMARK 500 ARG A 540 -48.62 71.06 REMARK 500 REMARK 500 REMARK: NULL DBREF 7U8X A 70 552 UNP Q12931 TRAP1_HUMAN 70 552 SEQRES 1 A 483 PRO LEU HIS SER ILE ILE SER SER THR GLU SER VAL GLN SEQRES 2 A 483 GLY SER THR SER LYS HIS GLU PHE GLN ALA GLU THR LYS SEQRES 3 A 483 LYS LEU LEU ASP ILE VAL ALA ARG SER LEU TYR SER GLU SEQRES 4 A 483 LYS GLU VAL PHE ILE ARG GLU LEU ILE SER ASN ALA SER SEQRES 5 A 483 ASP ALA LEU GLU LYS LEU ARG HIS LYS LEU VAL SER ASP SEQRES 6 A 483 GLY GLN ALA LEU PRO GLU MET GLU ILE HIS LEU GLN THR SEQRES 7 A 483 ASN ALA GLU LYS GLY THR ILE THR ILE GLN ASP THR GLY SEQRES 8 A 483 ILE GLY MET THR GLN GLU GLU LEU VAL SER ASN LEU GLY SEQRES 9 A 483 THR ILE ALA ARG SER GLY SER LYS ALA PHE LEU ASP ALA SEQRES 10 A 483 LEU GLN ASN GLN ALA GLU ALA SER SER LYS ILE ILE GLY SEQRES 11 A 483 GLN PHE GLY VAL GLY PHE TYR SER ALA PHE MET VAL ALA SEQRES 12 A 483 ASP ARG VAL GLU VAL TYR SER ARG SER ALA ALA PRO GLY SEQRES 13 A 483 SER LEU GLY TYR GLN TRP LEU SER ASP GLY SER GLY VAL SEQRES 14 A 483 PHE GLU ILE ALA GLU ALA SER GLY VAL ARG THR GLY THR SEQRES 15 A 483 LYS ILE ILE ILE HIS LEU LYS SER ASP CYS LYS GLU PHE SEQRES 16 A 483 SER SER GLU ALA ARG VAL ARG ASP VAL VAL THR LYS TYR SEQRES 17 A 483 SER ASN PHE VAL SER PHE PRO LEU TYR LEU ASN GLY ARG SEQRES 18 A 483 ARG MET ASN THR LEU GLN ALA ILE TRP MET MET ASP PRO SEQRES 19 A 483 LYS ASP VAL ARG GLU TRP GLN HIS GLU GLU PHE TYR ARG SEQRES 20 A 483 TYR VAL ALA GLN ALA HIS ASP LYS PRO ARG TYR THR LEU SEQRES 21 A 483 HIS TYR LYS THR ASP ALA PRO LEU ASN ILE ARG SER ILE SEQRES 22 A 483 PHE TYR VAL PRO ASP MET LYS PRO SER MET PHE ASP VAL SEQRES 23 A 483 SER ARG GLU LEU GLY SER SER VAL ALA LEU TYR SER ARG SEQRES 24 A 483 LYS VAL LEU ILE GLN THR LYS ALA THR ASP ILE LEU PRO SEQRES 25 A 483 LYS TRP LEU ARG PHE ILE ARG GLY VAL VAL ASP SER GLU SEQRES 26 A 483 ASP ILE PRO LEU ASN LEU SER ARG GLU LEU LEU GLN GLU SEQRES 27 A 483 SER ALA LEU ILE ARG LYS LEU ARG ASP VAL LEU GLN GLN SEQRES 28 A 483 ARG LEU ILE LYS PHE PHE ILE ASP GLN SER LYS LYS ASP SEQRES 29 A 483 ALA GLU LYS TYR ALA LYS PHE PHE GLU ASP TYR GLY LEU SEQRES 30 A 483 PHE MET ARG GLU GLY ILE VAL THR ALA THR GLU GLN GLU SEQRES 31 A 483 VAL LYS GLU ASP ILE ALA LYS LEU LEU ARG TYR GLU SER SEQRES 32 A 483 SER ALA LEU PRO SER GLY GLN LEU THR SER LEU SER GLU SEQRES 33 A 483 TYR ALA SER ARG MET ARG ALA GLY THR ARG ASN ILE TYR SEQRES 34 A 483 TYR LEU CYS ALA PRO ASN ARG HIS LEU ALA GLU HIS SER SEQRES 35 A 483 PRO TYR TYR GLU ALA MET LYS LYS LYS ASP THR GLU VAL SEQRES 36 A 483 LEU PHE CYS PHE GLU GLN PHE ASP GLU LEU THR LEU LEU SEQRES 37 A 483 HIS LEU ARG GLU PHE ASP LYS LYS LYS LEU ILE SER VAL SEQRES 38 A 483 GLU THR HET UJV A 601 32 HET UJV A 602 32 HETNAM UJV [5-(4-FLUORO-2H-ISOINDOLE-2-CARBONYL)-2- HETNAM 2 UJV HYDROXYPHENYL](5-METHOXY-2H-ISOINDOL-2-YL)METHANONE FORMUL 2 UJV 2(C25 H17 F N2 O4) FORMUL 4 HOH *314(H2 O) HELIX 1 AA1 GLN A 91 SER A 104 1 14 HELIX 2 AA2 GLU A 108 GLU A 110 5 3 HELIX 3 AA3 VAL A 111 ASP A 134 1 24 HELIX 4 AA4 THR A 164 ASN A 171 1 8 HELIX 5 AA5 GLY A 202 VAL A 211 1 10 HELIX 6 AA6 CYS A 261 SER A 265 5 5 HELIX 7 AA7 SER A 266 SER A 278 1 13 HELIX 8 AA8 ALA A 297 MET A 301 5 5 HELIX 9 AA9 ASP A 302 VAL A 306 5 5 HELIX 10 AB1 ARG A 307 GLN A 320 1 14 HELIX 11 AB2 PRO A 381 ARG A 385 5 5 HELIX 12 AB3 SER A 408 ASP A 433 1 26 HELIX 13 AB4 ASP A 433 ALA A 455 1 23 HELIX 14 AB5 GLU A 457 LYS A 466 1 10 HELIX 15 AB6 SER A 482 MET A 490 1 9 HELIX 16 AB7 ASN A 504 HIS A 510 1 7 HELIX 17 AB8 SER A 511 LYS A 518 1 8 HELIX 18 AB9 LYS A 519 ASP A 521 5 3 HELIX 19 AC1 PHE A 531 ARG A 540 1 10 SHEET 1 AA1 9 SER A 86 GLU A 89 0 SHEET 2 AA1 9 VAL A 238 ALA A 244 -1 O PHE A 239 N HIS A 88 SHEET 3 AA1 9 GLY A 228 SER A 233 -1 N GLN A 230 O ALA A 242 SHEET 4 AA1 9 ALA A 212 ARG A 220 -1 N VAL A 217 O TRP A 231 SHEET 5 AA1 9 GLY A 250 LEU A 257 -1 O ILE A 254 N GLU A 216 SHEET 6 AA1 9 THR A 153 ASP A 158 -1 N ILE A 156 O ILE A 253 SHEET 7 AA1 9 ILE A 143 ASN A 148 -1 N HIS A 144 O GLN A 157 SHEET 8 AA1 9 LEU A 285 LEU A 287 1 O TYR A 286 N LEU A 145 SHEET 9 AA1 9 ARG A 290 ARG A 291 -1 O ARG A 290 N LEU A 287 SHEET 1 AA2 5 PRO A 325 THR A 333 0 SHEET 2 AA2 5 ILE A 339 PRO A 346 -1 O PHE A 343 N LEU A 329 SHEET 3 AA2 5 ARG A 388 ASP A 392 -1 O ARG A 388 N TYR A 344 SHEET 4 AA2 5 VAL A 363 SER A 367 1 N TYR A 366 O VAL A 391 SHEET 5 AA2 5 VAL A 370 GLN A 373 -1 O ILE A 372 N LEU A 365 SHEET 1 AA3 5 GLU A 471 SER A 472 0 SHEET 2 AA3 5 VAL A 524 CYS A 527 -1 O PHE A 526 N GLU A 471 SHEET 3 AA3 5 ILE A 497 CYS A 501 1 N TYR A 498 O LEU A 525 SHEET 4 AA3 5 LYS A 545 SER A 549 1 O LYS A 546 N ILE A 497 SHEET 5 AA3 5 GLU A 541 PHE A 542 -1 N PHE A 542 O LYS A 545 CISPEP 1 ALA A 335 PRO A 336 0 2.98 CRYST1 41.758 68.863 183.088 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023948 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014522 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005462 0.00000