data_7UID # _entry.id 7UID # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7UID pdb_00007uid 10.2210/pdb7uid/pdb WWPDB D_1000264223 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2023-04-05 ? 2 'Structure model' 1 1 2023-08-09 ? 3 'Structure model' 2 0 2023-11-15 ? 4 'Structure model' 2 1 2024-10-23 ? 5 'Structure model' 3 0 2025-07-02 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Polymer sequence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' atom_site 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' pdbx_validate_main_chain_plane 7 3 'Structure model' pdbx_validate_peptide_omega 8 3 'Structure model' pdbx_validate_rmsd_angle 9 3 'Structure model' struct_conn 10 4 'Structure model' pdbx_entry_details 11 4 'Structure model' pdbx_modification_feature 12 5 'Structure model' entity_poly # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' 13 2 'Structure model' '_citation_author.name' 14 3 'Structure model' '_atom_site.auth_atom_id' 15 3 'Structure model' '_atom_site.label_atom_id' 16 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 17 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_pdbx_entry_details.has_protein_modification' 20 5 'Structure model' '_entity_poly.type' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7UID _pdbx_database_status.recvd_initial_deposition_date 2022-03-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email appellad@niddk.nih.gov _pdbx_contact_author.name_first Daniel _pdbx_contact_author.name_last Appella _pdbx_contact_author.name_mi H _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7195-7764 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Botos, I.' 1 ? 'Appella, D.H.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Jacs Au' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2691-3704 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 3 _citation.language ? _citation.page_first 1952 _citation.page_last 1964 _citation.title 'Variation of Tetrahydrofurans in Thyclotides Enhances Oligonucleotide Binding and Cellular Uptake of Peptide Nucleic Acids.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacsau.3c00198 _citation.pdbx_database_id_PubMed 37502163 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zheng, H.' 1 ? primary 'Clausse, V.' 2 ? primary 'Amarasekara, H.' 3 ? primary 'Mazur, S.J.' 4 0000-0002-6378-0791 primary 'Botos, I.' 5 ? primary 'Appella, D.H.' 6 0000-0001-7195-7764 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*AP*TP*GP*TP*GP*AP*TP*A)-3') ; 2794.859 2 ? ? ? ? 2 polymer syn Thyclotide 3030.674 2 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 6 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 5 water nat water 18.015 156 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DA)(DT)(DG)(DT)(DG)(DA)(DT)(DA)' GATGTGATA A,C ? 2 'peptide nucleic acid' no yes '(NSF)(NR0)(NSU)(NRL)(NR0)(NRL)(NR0)(NSU)(NRL)(XDV)' XXXXXXXXXX B,D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 'CHLORIDE ION' CL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DA n 1 3 DT n 1 4 DG n 1 5 DT n 1 6 DG n 1 7 DA n 1 8 DT n 1 9 DA n 2 1 NSF n 2 2 NR0 n 2 3 NSU n 2 4 NRL n 2 5 NR0 n 2 6 NRL n 2 7 NR0 n 2 8 NSU n 2 9 NRL n 2 10 XDV n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 9 'synthetic construct' ? 32630 ? 2 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 NR0 peptide-like . 'N-[(3R,4R)-4-aminooxolan-3-yl]-2-(6-amino-9H-purin-9-yl)-N-(2-oxoethyl)acetamide' ? 'C13 H17 N7 O4' 335.319 NRL peptide-like . 'N-[(3R,4R)-4-aminooxolan-3-yl]-N-[(4-amino-2-oxopyrimidin-1(2H)-yl)acetyl]glycine' ? 'C12 H17 N5 O5' 311.294 NSF peptide-like . 'N-[(3R,4R)-4-aminooxolan-3-yl]-N-[(5-iodo-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)acetyl]glycine' ? 'C12 H15 I N4 O6' 438.175 NSU peptide-like . 'N-[(3R,4R)-4-aminooxolan-3-yl]-N-[(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)acetyl]glycine' ? 'C13 H18 N4 O6' 326.305 XDV non-polymer . '2-[2-(2-aminoethoxy)ethoxy]acetamide' ? 'C6 H14 N2 O3' 162.187 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DA 2 2 2 DA DA A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DA 9 9 9 DA DA A . n B 1 1 DG 1 1 1 DG DG C . n B 1 2 DA 2 2 2 DA DA C . n B 1 3 DT 3 3 3 DT DT C . n B 1 4 DG 4 4 4 DG DG C . n B 1 5 DT 5 5 5 DT DT C . n B 1 6 DG 6 6 6 DG DG C . n B 1 7 DA 7 7 7 DA DA C . n B 1 8 DT 8 8 8 DT DT C . n B 1 9 DA 9 9 9 DA DA C . n C 2 1 NSF 1 1 1 NSF TI8 B . n C 2 2 NR0 2 2 2 NR0 AP8 B . n C 2 3 NSU 3 3 3 NSU TP8 B . n C 2 4 NRL 4 4 4 NRL CP8 B . n C 2 5 NR0 5 5 5 NR0 AP8 B . n C 2 6 NRL 6 6 6 NRL CP8 B . n C 2 7 NR0 7 7 7 NR0 AP8 B . n C 2 8 NSU 8 8 8 NSU TP8 B . n C 2 9 NRL 9 9 9 NRL CP8 B . n C 2 10 XDV 10 10 10 XDV MP9 B . n D 2 1 NSF 1 1 1 NSF TI8 D . n D 2 2 NR0 2 2 2 NR0 AP8 D . n D 2 3 NSU 3 3 3 NSU TP8 D . n D 2 4 NRL 4 4 4 NRL CP8 D . n D 2 5 NR0 5 5 5 NR0 AP8 D . n D 2 6 NRL 6 6 6 NRL CP8 D . n D 2 7 NR0 7 7 7 NR0 AP8 D . n D 2 8 NSU 8 8 8 NSU TP8 D . n D 2 9 NRL 9 9 9 NRL CP8 D . n D 2 10 XDV 10 10 10 XDV MP9 D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN 1 101 1 ZN ZN A . F 3 ZN 1 102 5 ZN ZN A . G 3 ZN 1 103 4 ZN ZN A . H 3 ZN 1 101 2 ZN ZN C . I 3 ZN 1 102 3 ZN ZN C . J 3 ZN 1 103 6 ZN ZN C . K 4 CL 1 101 8 CL CL B . L 4 CL 1 101 7 CL CL D . M 5 HOH 1 201 119 HOH HOH A . M 5 HOH 2 202 148 HOH HOH A . M 5 HOH 3 203 71 HOH HOH A . M 5 HOH 4 204 25 HOH HOH A . M 5 HOH 5 205 51 HOH HOH A . M 5 HOH 6 206 24 HOH HOH A . M 5 HOH 7 207 48 HOH HOH A . M 5 HOH 8 208 11 HOH HOH A . M 5 HOH 9 209 5 HOH HOH A . M 5 HOH 10 210 136 HOH HOH A . M 5 HOH 11 211 127 HOH HOH A . M 5 HOH 12 212 29 HOH HOH A . M 5 HOH 13 213 146 HOH HOH A . M 5 HOH 14 214 40 HOH HOH A . M 5 HOH 15 215 105 HOH HOH A . M 5 HOH 16 216 26 HOH HOH A . M 5 HOH 17 217 45 HOH HOH A . M 5 HOH 18 218 6 HOH HOH A . M 5 HOH 19 219 61 HOH HOH A . M 5 HOH 20 220 114 HOH HOH A . M 5 HOH 21 221 155 HOH HOH A . M 5 HOH 22 222 55 HOH HOH A . M 5 HOH 23 223 109 HOH HOH A . M 5 HOH 24 224 120 HOH HOH A . M 5 HOH 25 225 3 HOH HOH A . M 5 HOH 26 226 89 HOH HOH A . M 5 HOH 27 227 137 HOH HOH A . M 5 HOH 28 228 134 HOH HOH A . M 5 HOH 29 229 97 HOH HOH A . M 5 HOH 30 230 156 HOH HOH A . M 5 HOH 31 231 140 HOH HOH A . M 5 HOH 32 232 84 HOH HOH A . M 5 HOH 33 233 80 HOH HOH A . M 5 HOH 34 234 131 HOH HOH A . M 5 HOH 35 235 122 HOH HOH A . M 5 HOH 36 236 153 HOH HOH A . M 5 HOH 37 237 76 HOH HOH A . M 5 HOH 38 238 14 HOH HOH A . M 5 HOH 39 239 132 HOH HOH A . M 5 HOH 40 240 88 HOH HOH A . M 5 HOH 41 241 22 HOH HOH A . M 5 HOH 42 242 16 HOH HOH A . M 5 HOH 43 243 78 HOH HOH A . M 5 HOH 44 244 93 HOH HOH A . N 5 HOH 1 201 138 HOH HOH C . N 5 HOH 2 202 83 HOH HOH C . N 5 HOH 3 203 106 HOH HOH C . N 5 HOH 4 204 121 HOH HOH C . N 5 HOH 5 205 91 HOH HOH C . N 5 HOH 6 206 2 HOH HOH C . N 5 HOH 7 207 12 HOH HOH C . N 5 HOH 8 208 57 HOH HOH C . N 5 HOH 9 209 86 HOH HOH C . N 5 HOH 10 210 65 HOH HOH C . N 5 HOH 11 211 77 HOH HOH C . N 5 HOH 12 212 53 HOH HOH C . N 5 HOH 13 213 99 HOH HOH C . N 5 HOH 14 214 18 HOH HOH C . N 5 HOH 15 215 31 HOH HOH C . N 5 HOH 16 216 101 HOH HOH C . N 5 HOH 17 217 145 HOH HOH C . N 5 HOH 18 218 58 HOH HOH C . N 5 HOH 19 219 10 HOH HOH C . N 5 HOH 20 220 21 HOH HOH C . N 5 HOH 21 221 149 HOH HOH C . N 5 HOH 22 222 38 HOH HOH C . N 5 HOH 23 223 54 HOH HOH C . N 5 HOH 24 224 72 HOH HOH C . N 5 HOH 25 225 27 HOH HOH C . N 5 HOH 26 226 123 HOH HOH C . N 5 HOH 27 227 144 HOH HOH C . N 5 HOH 28 228 66 HOH HOH C . N 5 HOH 29 229 130 HOH HOH C . N 5 HOH 30 230 102 HOH HOH C . N 5 HOH 31 231 37 HOH HOH C . N 5 HOH 32 232 81 HOH HOH C . N 5 HOH 33 233 133 HOH HOH C . N 5 HOH 34 234 100 HOH HOH C . N 5 HOH 35 235 34 HOH HOH C . O 5 HOH 1 201 125 HOH HOH B . O 5 HOH 2 202 90 HOH HOH B . O 5 HOH 3 203 79 HOH HOH B . O 5 HOH 4 204 56 HOH HOH B . O 5 HOH 5 205 64 HOH HOH B . O 5 HOH 6 206 141 HOH HOH B . O 5 HOH 7 207 50 HOH HOH B . O 5 HOH 8 208 15 HOH HOH B . O 5 HOH 9 209 85 HOH HOH B . O 5 HOH 10 210 7 HOH HOH B . O 5 HOH 11 211 62 HOH HOH B . O 5 HOH 12 212 36 HOH HOH B . O 5 HOH 13 213 115 HOH HOH B . O 5 HOH 14 214 9 HOH HOH B . O 5 HOH 15 215 60 HOH HOH B . O 5 HOH 16 216 49 HOH HOH B . O 5 HOH 17 217 43 HOH HOH B . O 5 HOH 18 218 46 HOH HOH B . O 5 HOH 19 219 75 HOH HOH B . O 5 HOH 20 220 17 HOH HOH B . O 5 HOH 21 221 35 HOH HOH B . O 5 HOH 22 222 112 HOH HOH B . O 5 HOH 23 223 87 HOH HOH B . O 5 HOH 24 224 47 HOH HOH B . O 5 HOH 25 225 129 HOH HOH B . O 5 HOH 26 226 4 HOH HOH B . O 5 HOH 27 227 104 HOH HOH B . O 5 HOH 28 228 98 HOH HOH B . O 5 HOH 29 229 23 HOH HOH B . O 5 HOH 30 230 128 HOH HOH B . O 5 HOH 31 231 152 HOH HOH B . O 5 HOH 32 232 20 HOH HOH B . O 5 HOH 33 233 135 HOH HOH B . O 5 HOH 34 234 92 HOH HOH B . O 5 HOH 35 235 19 HOH HOH B . O 5 HOH 36 236 70 HOH HOH B . O 5 HOH 37 237 94 HOH HOH B . O 5 HOH 38 238 96 HOH HOH B . O 5 HOH 39 239 28 HOH HOH B . O 5 HOH 40 240 33 HOH HOH B . O 5 HOH 41 241 142 HOH HOH B . O 5 HOH 42 242 82 HOH HOH B . O 5 HOH 43 243 117 HOH HOH B . P 5 HOH 1 201 74 HOH HOH D . P 5 HOH 2 202 1 HOH HOH D . P 5 HOH 3 203 69 HOH HOH D . P 5 HOH 4 204 116 HOH HOH D . P 5 HOH 5 205 39 HOH HOH D . P 5 HOH 6 206 13 HOH HOH D . P 5 HOH 7 207 73 HOH HOH D . P 5 HOH 8 208 42 HOH HOH D . P 5 HOH 9 209 108 HOH HOH D . P 5 HOH 10 210 150 HOH HOH D . P 5 HOH 11 211 107 HOH HOH D . P 5 HOH 12 212 41 HOH HOH D . P 5 HOH 13 213 30 HOH HOH D . P 5 HOH 14 214 8 HOH HOH D . P 5 HOH 15 215 63 HOH HOH D . P 5 HOH 16 216 44 HOH HOH D . P 5 HOH 17 217 32 HOH HOH D . P 5 HOH 18 218 154 HOH HOH D . P 5 HOH 19 219 110 HOH HOH D . P 5 HOH 20 220 59 HOH HOH D . P 5 HOH 21 221 52 HOH HOH D . P 5 HOH 22 222 68 HOH HOH D . P 5 HOH 23 223 113 HOH HOH D . P 5 HOH 24 224 111 HOH HOH D . P 5 HOH 25 225 103 HOH HOH D . P 5 HOH 26 226 67 HOH HOH D . P 5 HOH 27 227 126 HOH HOH D . P 5 HOH 28 228 124 HOH HOH D . P 5 HOH 29 229 147 HOH HOH D . P 5 HOH 30 230 139 HOH HOH D . P 5 HOH 31 231 151 HOH HOH D . P 5 HOH 32 232 118 HOH HOH D . P 5 HOH 33 233 143 HOH HOH D . P 5 HOH 34 234 95 HOH HOH D . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.4 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 2021 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 2021 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? 1.19 4 # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 90 _cell.angle_beta_esd ? _cell.angle_gamma 90 _cell.angle_gamma_esd ? _cell.entry_id 7UID _cell.details ? _cell.formula_units_Z ? _cell.length_a 54.286 _cell.length_a_esd ? _cell.length_b 64.098 _cell.length_b_esd ? _cell.length_c 71.244 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7UID _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7UID _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.75 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;10% PEG 3350, 200mM Zinc Acetate, 100mM Sodium Acetate, pH 4.5 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details VariMAX _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER R 4M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-04-15 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU FR-X' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7UID _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 35.62 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8493 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.2 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.99 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.05 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 622 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.16 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.99 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 2.0091 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][2] 0.6524 _refine.aniso_B[2][3] 0 _refine.aniso_B[3][3] -2.6615 _refine.B_iso_max ? _refine.B_iso_mean 22.84 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.919 _refine.correlation_coeff_Fo_to_Fc_free 0.903 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7UID _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2 _refine.ls_d_res_low 35.62 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8482 _refine.ls_number_reflns_R_free 443 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.5 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2339 _refine.ls_R_factor_R_free 0.2646 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2321 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.177 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.197 _refine.pdbx_overall_SU_R_Blow_DPI 0.264 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.242 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 7UID _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2 _refine_hist.d_res_low 35.62 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 954 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 372 _refine_hist.pdbx_number_atoms_ligand 426 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 ? 1172 ? t_bond_d 2 HARMONIC 'X-RAY DIFFRACTION' ? 1.09 ? 1922 ? t_angle_deg 2 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 206 ? t_dihedral_angle_d 2 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? 70 ? t_gen_planes 5 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 876 ? t_it 10 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 54 ? t_chiral_improper_torsion 5 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? 903 ? t_ideal_dist_contact 4 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 29.65 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2 _refine_ls_shell.d_res_low 2.03 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 386 _refine_ls_shell.number_reflns_R_free 22 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.percent_reflns_obs 100 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs 0.2372 _refine_ls_shell.R_factor_R_free 0.2457 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2368 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7UID _struct.title 'Thyclotides peptide nucleic acid in complex with DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7UID _struct_keywords.text 'thyclotides, peptide nucleic acid, PNA, PEPTIDE NUCLEIC ACID-DNA complex, DNA-PEPTIDE NUCLEIC ACID complex' _struct_keywords.pdbx_keywords 'DNA/PEPTIDE NUCLEIC ACID' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 4 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7UID 7UID ? 1 ? 1 2 PDB 7UID 7UID ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7UID A 1 ? 9 ? 7UID 1 ? 9 ? 1 9 2 1 7UID C 1 ? 9 ? 7UID 1 ? 9 ? 1 9 3 2 7UID B 1 ? 10 ? 7UID 1 ? 10 ? 1 10 4 2 7UID D 1 ? 10 ? 7UID 1 ? 10 ? 1 10 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,G,K,M,O 2 1 B,D,H,I,J,L,N,P # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details 'The assymmetric unit has 2, non-equivalent dimers. One nucleobase is flipped out in dimer AB, while in CD all the bases pair up.' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C NSF 1 C ? ? ? 1_555 C NR0 2 N ? ? B NSF 1 B NR0 2 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? C NR0 2 C ? ? ? 1_555 C NSU 3 N ? ? B NR0 2 B NSU 3 1_555 ? ? ? ? ? ? ? 1.357 ? ? covale3 covale both ? C NSU 3 C ? ? ? 1_555 C NRL 4 N ? ? B NSU 3 B NRL 4 1_555 ? ? ? ? ? ? ? 1.380 ? ? covale4 covale both ? C NRL 4 C ? ? ? 1_555 C NR0 5 N ? ? B NRL 4 B NR0 5 1_555 ? ? ? ? ? ? ? 1.312 ? ? covale5 covale both ? C NR0 5 C ? ? ? 1_555 C NRL 6 N ? ? B NR0 5 B NRL 6 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale6 covale both ? C NRL 6 C ? ? ? 1_555 C NR0 7 N ? ? B NRL 6 B NR0 7 1_555 ? ? ? ? ? ? ? 1.290 ? ? covale7 covale both ? C NR0 7 C ? ? ? 1_555 C NSU 8 N ? ? B NR0 7 B NSU 8 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale8 covale both ? C NSU 8 C ? ? ? 1_555 C NRL 9 N ? ? B NSU 8 B NRL 9 1_555 ? ? ? ? ? ? ? 1.300 ? ? covale9 covale both ? C NRL 9 C ? ? ? 1_555 C XDV 10 N01 ? ? B NRL 9 B XDV 10 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale10 covale both ? D NSF 1 C ? ? ? 1_555 D NR0 2 N ? ? D NSF 1 D NR0 2 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale11 covale both ? D NR0 2 C ? ? ? 1_555 D NSU 3 N ? ? D NR0 2 D NSU 3 1_555 ? ? ? ? ? ? ? 1.369 ? ? covale12 covale both ? D NSU 3 C ? ? ? 1_555 D NRL 4 N ? ? D NSU 3 D NRL 4 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale13 covale both ? D NRL 4 C ? ? ? 1_555 D NR0 5 N ? ? D NRL 4 D NR0 5 1_555 ? ? ? ? ? ? ? 1.361 ? ? covale14 covale both ? D NR0 5 C ? ? ? 1_555 D NRL 6 N ? ? D NR0 5 D NRL 6 1_555 ? ? ? ? ? ? ? 1.358 ? ? covale15 covale both ? D NRL 6 C ? ? ? 1_555 D NR0 7 N ? ? D NRL 6 D NR0 7 1_555 ? ? ? ? ? ? ? 1.360 ? ? covale16 covale both ? D NR0 7 C ? ? ? 1_555 D NSU 8 N ? ? D NR0 7 D NSU 8 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale17 covale both ? D NSU 8 C ? ? ? 1_555 D NRL 9 N ? ? D NSU 8 D NRL 9 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale18 covale both ? D NRL 9 C ? ? ? 1_555 D XDV 10 N01 ? ? D NRL 9 D XDV 10 1_555 ? ? ? ? ? ? ? 1.382 ? ? metalc1 metalc ? ? A DG 1 N7 ? ? ? 1_555 F ZN . ZN ? ? A DG 1 A ZN 102 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc2 metalc ? ? A DG 4 N7 ? ? ? 1_555 G ZN . ZN ? ? A DG 4 A ZN 103 1_555 ? ? ? ? ? ? ? 2.210 ? ? metalc3 metalc ? ? A DG 6 N7 ? ? ? 1_555 E ZN . ZN ? ? A DG 6 A ZN 101 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc4 metalc ? ? E ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 101 A HOH 205 1_555 ? ? ? ? ? ? ? 2.383 ? ? metalc5 metalc ? ? E ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 101 A HOH 207 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc6 metalc ? ? E ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 101 A HOH 212 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc7 metalc ? ? E ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 101 A HOH 214 1_555 ? ? ? ? ? ? ? 2.209 ? ? metalc8 metalc ? ? E ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 101 A HOH 242 1_555 ? ? ? ? ? ? ? 2.086 ? ? metalc9 metalc ? ? F ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 102 A HOH 217 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc10 metalc ? ? F ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 102 A HOH 229 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc11 metalc ? ? F ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 102 A HOH 232 1_555 ? ? ? ? ? ? ? 2.109 ? ? metalc12 metalc ? ? F ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 102 A HOH 241 1_555 ? ? ? ? ? ? ? 1.889 ? ? metalc13 metalc ? ? F ZN . ZN ? ? ? 1_555 N HOH . O ? ? A ZN 102 C HOH 210 5_454 ? ? ? ? ? ? ? 2.320 ? ? metalc14 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 103 A HOH 203 1_555 ? ? ? ? ? ? ? 2.596 ? ? metalc15 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? A ZN 103 A HOH 230 1_555 ? ? ? ? ? ? ? 2.025 ? ? metalc16 metalc ? ? B DG 1 N7 ? ? ? 1_555 J ZN . ZN ? ? C DG 1 C ZN 103 1_555 ? ? ? ? ? ? ? 1.906 ? ? metalc17 metalc ? ? B DG 1 O6 ? ? ? 1_555 J ZN . ZN ? ? C DG 1 C ZN 103 1_555 ? ? ? ? ? ? ? 1.919 ? ? metalc18 metalc ? ? B DG 4 N7 ? ? ? 1_555 H ZN . ZN ? ? C DG 4 C ZN 101 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc19 metalc ? ? B DG 6 N7 ? ? ? 1_555 I ZN . ZN ? ? C DG 6 C ZN 102 1_555 ? ? ? ? ? ? ? 1.952 ? ? metalc20 metalc ? ? H ZN . ZN ? ? ? 1_555 N HOH . O ? ? C ZN 101 C HOH 214 1_555 ? ? ? ? ? ? ? 2.195 ? ? metalc21 metalc ? ? H ZN . ZN ? ? ? 1_555 N HOH . O ? ? C ZN 101 C HOH 215 1_555 ? ? ? ? ? ? ? 2.467 ? ? metalc22 metalc ? ? H ZN . ZN ? ? ? 1_555 N HOH . O ? ? C ZN 101 C HOH 218 1_555 ? ? ? ? ? ? ? 2.421 ? ? metalc23 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? C ZN 102 C HOH 209 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc24 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? C ZN 102 C HOH 213 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc25 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? C ZN 102 C HOH 219 1_555 ? ? ? ? ? ? ? 2.613 ? ? metalc26 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? C ZN 102 C HOH 228 1_555 ? ? ? ? ? ? ? 2.480 ? ? metalc27 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? C ZN 102 C HOH 234 1_555 ? ? ? ? ? ? ? 2.157 ? ? hydrog1 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DG 1 N2 ? ? A DA 9 C DG 1 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog2 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DG 1 N3 ? ? A DA 9 C DG 1 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 1 ? A DG 1 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 217 ? 1_555 98.3 ? 2 N7 ? A DG 1 ? A DG 1 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 229 ? 1_555 91.8 ? 3 O ? M HOH . ? A HOH 217 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 229 ? 1_555 92.8 ? 4 N7 ? A DG 1 ? A DG 1 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 232 ? 1_555 94.7 ? 5 O ? M HOH . ? A HOH 217 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 232 ? 1_555 166.3 ? 6 O ? M HOH . ? A HOH 229 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 232 ? 1_555 82.3 ? 7 N7 ? A DG 1 ? A DG 1 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 241 ? 1_555 175.3 ? 8 O ? M HOH . ? A HOH 217 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 241 ? 1_555 77.0 ? 9 O ? M HOH . ? A HOH 229 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 241 ? 1_555 88.5 ? 10 O ? M HOH . ? A HOH 232 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? M HOH . ? A HOH 241 ? 1_555 90.0 ? 11 N7 ? A DG 1 ? A DG 1 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? N HOH . ? C HOH 210 ? 5_454 100.0 ? 12 O ? M HOH . ? A HOH 217 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? N HOH . ? C HOH 210 ? 5_454 87.9 ? 13 O ? M HOH . ? A HOH 229 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? N HOH . ? C HOH 210 ? 5_454 167.9 ? 14 O ? M HOH . ? A HOH 232 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? N HOH . ? C HOH 210 ? 5_454 94.3 ? 15 O ? M HOH . ? A HOH 241 ? 1_555 ZN ? F ZN . ? A ZN 102 ? 1_555 O ? N HOH . ? C HOH 210 ? 5_454 79.9 ? 16 N7 ? A DG 4 ? A DG 4 ? 1_555 ZN ? G ZN . ? A ZN 103 ? 1_555 O ? M HOH . ? A HOH 203 ? 1_555 98.8 ? 17 N7 ? A DG 4 ? A DG 4 ? 1_555 ZN ? G ZN . ? A ZN 103 ? 1_555 O ? M HOH . ? A HOH 230 ? 1_555 95.2 ? 18 O ? M HOH . ? A HOH 203 ? 1_555 ZN ? G ZN . ? A ZN 103 ? 1_555 O ? M HOH . ? A HOH 230 ? 1_555 133.7 ? 19 N7 ? A DG 6 ? A DG 6 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 205 ? 1_555 90.5 ? 20 N7 ? A DG 6 ? A DG 6 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 207 ? 1_555 93.0 ? 21 O ? M HOH . ? A HOH 205 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 207 ? 1_555 169.4 ? 22 N7 ? A DG 6 ? A DG 6 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 212 ? 1_555 88.1 ? 23 O ? M HOH . ? A HOH 205 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 212 ? 1_555 91.5 ? 24 O ? M HOH . ? A HOH 207 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 212 ? 1_555 98.6 ? 25 N7 ? A DG 6 ? A DG 6 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 214 ? 1_555 97.1 ? 26 O ? M HOH . ? A HOH 205 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 214 ? 1_555 84.6 ? 27 O ? M HOH . ? A HOH 207 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 214 ? 1_555 85.0 ? 28 O ? M HOH . ? A HOH 212 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 214 ? 1_555 173.5 ? 29 N7 ? A DG 6 ? A DG 6 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 242 ? 1_555 175.8 ? 30 O ? M HOH . ? A HOH 205 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 242 ? 1_555 87.6 ? 31 O ? M HOH . ? A HOH 207 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 242 ? 1_555 89.5 ? 32 O ? M HOH . ? A HOH 212 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 242 ? 1_555 88.2 ? 33 O ? M HOH . ? A HOH 214 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 O ? M HOH . ? A HOH 242 ? 1_555 86.4 ? 34 N7 ? B DG 1 ? C DG 1 ? 1_555 ZN ? J ZN . ? C ZN 103 ? 1_555 O6 ? B DG 1 ? C DG 1 ? 1_555 108.4 ? 35 N7 ? B DG 4 ? C DG 4 ? 1_555 ZN ? H ZN . ? C ZN 101 ? 1_555 O ? N HOH . ? C HOH 214 ? 1_555 88.0 ? 36 N7 ? B DG 4 ? C DG 4 ? 1_555 ZN ? H ZN . ? C ZN 101 ? 1_555 O ? N HOH . ? C HOH 215 ? 1_555 98.4 ? 37 O ? N HOH . ? C HOH 214 ? 1_555 ZN ? H ZN . ? C ZN 101 ? 1_555 O ? N HOH . ? C HOH 215 ? 1_555 171.2 ? 38 N7 ? B DG 4 ? C DG 4 ? 1_555 ZN ? H ZN . ? C ZN 101 ? 1_555 O ? N HOH . ? C HOH 218 ? 1_555 102.2 ? 39 O ? N HOH . ? C HOH 214 ? 1_555 ZN ? H ZN . ? C ZN 101 ? 1_555 O ? N HOH . ? C HOH 218 ? 1_555 98.3 ? 40 O ? N HOH . ? C HOH 215 ? 1_555 ZN ? H ZN . ? C ZN 101 ? 1_555 O ? N HOH . ? C HOH 218 ? 1_555 86.3 ? 41 N7 ? B DG 6 ? C DG 6 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 209 ? 1_555 99.6 ? 42 N7 ? B DG 6 ? C DG 6 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 213 ? 1_555 91.7 ? 43 O ? N HOH . ? C HOH 209 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 213 ? 1_555 96.5 ? 44 N7 ? B DG 6 ? C DG 6 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 219 ? 1_555 102.9 ? 45 O ? N HOH . ? C HOH 209 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 219 ? 1_555 154.5 ? 46 O ? N HOH . ? C HOH 213 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 219 ? 1_555 94.8 ? 47 N7 ? B DG 6 ? C DG 6 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 228 ? 1_555 98.4 ? 48 O ? N HOH . ? C HOH 209 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 228 ? 1_555 72.6 ? 49 O ? N HOH . ? C HOH 213 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 228 ? 1_555 166.2 ? 50 O ? N HOH . ? C HOH 219 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 228 ? 1_555 92.2 ? 51 N7 ? B DG 6 ? C DG 6 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 234 ? 1_555 155.1 ? 52 O ? N HOH . ? C HOH 209 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 234 ? 1_555 58.5 ? 53 O ? N HOH . ? C HOH 213 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 234 ? 1_555 80.2 ? 54 O ? N HOH . ? C HOH 219 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 234 ? 1_555 101.2 ? 55 O ? N HOH . ? C HOH 228 ? 1_555 ZN ? I ZN . ? C ZN 102 ? 1_555 O ? N HOH . ? C HOH 234 ? 1_555 86.7 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NSF C 1 ? . . . . NSF B 1 ? 1_555 . . . . . . . ? 1 NSF None 'Non-standard residue' 2 NR0 C 2 ? . . . . NR0 B 2 ? 1_555 . . . . . . . ? 1 NR0 None 'Non-standard residue' 3 NSU C 3 ? . . . . NSU B 3 ? 1_555 . . . . . . . ? 1 NSU None 'Non-standard residue' 4 NRL C 4 ? . . . . NRL B 4 ? 1_555 . . . . . . . ? 1 NRL None 'Non-standard residue' 5 NR0 C 5 ? . . . . NR0 B 5 ? 1_555 . . . . . . . ? 1 NR0 None 'Non-standard residue' 6 NRL C 6 ? . . . . NRL B 6 ? 1_555 . . . . . . . ? 1 NRL None 'Non-standard residue' 7 NR0 C 7 ? . . . . NR0 B 7 ? 1_555 . . . . . . . ? 1 NR0 None 'Non-standard residue' 8 NSU C 8 ? . . . . NSU B 8 ? 1_555 . . . . . . . ? 1 NSU None 'Non-standard residue' 9 NRL C 9 ? . . . . NRL B 9 ? 1_555 . . . . . . . ? 1 NRL None 'Non-standard residue' 10 XDV C 10 ? . . . . XDV B 10 ? 1_555 . . . . . . . ? 1 XDV None 'Non-standard residue' 11 NSF D 1 ? . . . . NSF D 1 ? 1_555 . . . . . . . ? 1 NSF None 'Non-standard residue' 12 NR0 D 2 ? . . . . NR0 D 2 ? 1_555 . . . . . . . ? 1 NR0 None 'Non-standard residue' 13 NSU D 3 ? . . . . NSU D 3 ? 1_555 . . . . . . . ? 1 NSU None 'Non-standard residue' 14 NRL D 4 ? . . . . NRL D 4 ? 1_555 . . . . . . . ? 1 NRL None 'Non-standard residue' 15 NR0 D 5 ? . . . . NR0 D 5 ? 1_555 . . . . . . . ? 1 NR0 None 'Non-standard residue' 16 NRL D 6 ? . . . . NRL D 6 ? 1_555 . . . . . . . ? 1 NRL None 'Non-standard residue' 17 NR0 D 7 ? . . . . NR0 D 7 ? 1_555 . . . . . . . ? 1 NR0 None 'Non-standard residue' 18 NSU D 8 ? . . . . NSU D 8 ? 1_555 . . . . . . . ? 1 NSU None 'Non-standard residue' 19 NRL D 9 ? . . . . NRL D 9 ? 1_555 . . . . . . . ? 1 NRL None 'Non-standard residue' 20 XDV D 10 ? . . . . XDV D 10 ? 1_555 . . . . . . . ? 1 XDV None 'Non-standard residue' # _pdbx_entry_details.entry_id 7UID _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA B NR0 2 ? ? C B NR0 2 ? ? N B NSU 3 ? ? 97.47 117.20 -19.73 2.20 Y 2 1 CA B NSU 3 ? ? C B NSU 3 ? ? N B NRL 4 ? ? 93.58 117.20 -23.62 2.20 Y 3 1 CA B NRL 4 ? ? C B NRL 4 ? ? N B NR0 5 ? ? 96.06 117.20 -21.14 2.20 Y 4 1 O B NRL 4 ? ? C B NRL 4 ? ? N B NR0 5 ? ? 133.94 122.70 11.24 1.60 Y 5 1 CA B NR0 5 ? ? C B NR0 5 ? ? N B NRL 6 ? ? 102.80 117.20 -14.40 2.20 Y 6 1 CA B NRL 6 ? ? C B NRL 6 ? ? N B NR0 7 ? ? 93.09 117.20 -24.11 2.20 Y 7 1 CA B NR0 7 ? ? C B NR0 7 ? ? N B NSU 8 ? ? 102.75 117.20 -14.45 2.20 Y 8 1 CA B NSU 8 ? ? C B NSU 8 ? ? N B NRL 9 ? ? 100.78 117.20 -16.42 2.20 Y 9 1 CA D NSF 1 ? ? C D NSF 1 ? ? N D NR0 2 ? ? 133.43 117.20 16.23 2.20 Y 10 1 CA D NR0 2 ? ? C D NR0 2 ? ? N D NSU 3 ? ? 96.53 117.20 -20.67 2.20 Y 11 1 CA D NSU 3 ? ? C D NSU 3 ? ? N D NRL 4 ? ? 98.04 117.20 -19.16 2.20 Y 12 1 CA D NRL 4 ? ? C D NRL 4 ? ? N D NR0 5 ? ? 93.84 117.20 -23.36 2.20 Y 13 1 O D NRL 4 ? ? C D NRL 4 ? ? N D NR0 5 ? ? 134.80 122.70 12.10 1.60 Y 14 1 CA D NRL 6 ? ? C D NRL 6 ? ? N D NR0 7 ? ? 98.55 117.20 -18.65 2.20 Y 15 1 O D NRL 6 ? ? C D NRL 6 ? ? N D NR0 7 ? ? 102.08 122.70 -20.62 1.60 Y 16 1 C D NRL 6 ? ? N D NR0 7 ? ? CA D NR0 7 ? ? 147.08 121.70 25.38 2.50 Y 17 1 O D NR0 7 ? ? C D NR0 7 ? ? N D NSU 8 ? ? 108.34 122.70 -14.36 1.60 Y 18 1 C D NR0 7 ? ? N D NSU 8 ? ? CA D NSU 8 ? ? 159.67 121.70 37.97 2.50 Y 19 1 CA D NSU 8 ? ? C D NSU 8 ? ? N D NRL 9 ? ? 90.97 117.20 -26.23 2.20 Y # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 NR0 B 2 ? ? NSU B 3 ? ? -142.33 2 1 NSU B 3 ? ? NRL B 4 ? ? -147.84 3 1 NR0 B 5 ? ? NRL B 6 ? ? -149.82 4 1 NR0 B 7 ? ? NSU B 8 ? ? -138.64 5 1 NR0 D 5 ? ? NRL D 6 ? ? -149.58 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 NSF B 1 ? ? -12.65 2 1 NR0 B 2 ? ? 12.02 3 1 NSU B 3 ? ? 22.11 4 1 NSU B 8 ? ? 15.39 5 1 NR0 D 2 ? ? 12.64 6 1 NSU D 3 ? ? 20.04 7 1 NRL D 6 ? ? 25.88 8 1 NSU D 8 ? ? 15.07 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CL CL CL N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DG OP3 O N N 38 DG P P N N 39 DG OP1 O N N 40 DG OP2 O N N 41 DG "O5'" O N N 42 DG "C5'" C N N 43 DG "C4'" C N R 44 DG "O4'" O N N 45 DG "C3'" C N S 46 DG "O3'" O N N 47 DG "C2'" C N N 48 DG "C1'" C N R 49 DG N9 N Y N 50 DG C8 C Y N 51 DG N7 N Y N 52 DG C5 C Y N 53 DG C6 C N N 54 DG O6 O N N 55 DG N1 N N N 56 DG C2 C N N 57 DG N2 N N N 58 DG N3 N N N 59 DG C4 C Y N 60 DG HOP3 H N N 61 DG HOP2 H N N 62 DG "H5'" H N N 63 DG "H5''" H N N 64 DG "H4'" H N N 65 DG "H3'" H N N 66 DG "HO3'" H N N 67 DG "H2'" H N N 68 DG "H2''" H N N 69 DG "H1'" H N N 70 DG H8 H N N 71 DG H1 H N N 72 DG H21 H N N 73 DG H22 H N N 74 DT OP3 O N N 75 DT P P N N 76 DT OP1 O N N 77 DT OP2 O N N 78 DT "O5'" O N N 79 DT "C5'" C N N 80 DT "C4'" C N R 81 DT "O4'" O N N 82 DT "C3'" C N S 83 DT "O3'" O N N 84 DT "C2'" C N N 85 DT "C1'" C N R 86 DT N1 N N N 87 DT C2 C N N 88 DT O2 O N N 89 DT N3 N N N 90 DT C4 C N N 91 DT O4 O N N 92 DT C5 C N N 93 DT C7 C N N 94 DT C6 C N N 95 DT HOP3 H N N 96 DT HOP2 H N N 97 DT "H5'" H N N 98 DT "H5''" H N N 99 DT "H4'" H N N 100 DT "H3'" H N N 101 DT "HO3'" H N N 102 DT "H2'" H N N 103 DT "H2''" H N N 104 DT "H1'" H N N 105 DT H3 H N N 106 DT H71 H N N 107 DT H72 H N N 108 DT H73 H N N 109 DT H6 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 NR0 C10 C N N 114 NR0 C11 C N N 115 NR0 C12 C N N 116 NR0 C14 C Y N 117 NR0 C16 C Y N 118 NR0 C17 C Y N 119 NR0 C18 C Y N 120 NR0 C21 C Y N 121 NR0 C C N N 122 NR0 C03 C N N 123 NR0 C05 C N R 124 NR0 CA C N R 125 NR0 C08 C N N 126 NR0 N04 N N N 127 NR0 N N N N 128 NR0 N13 N Y N 129 NR0 N15 N Y N 130 NR0 N19 N N N 131 NR0 N20 N Y N 132 NR0 N22 N Y N 133 NR0 O O N N 134 NR0 O09 O N N 135 NR0 O23 O N N 136 NR0 H102 H N N 137 NR0 H101 H N N 138 NR0 H121 H N N 139 NR0 H122 H N N 140 NR0 H141 H N N 141 NR0 H211 H N N 142 NR0 OXT O N N 143 NR0 H032 H N N 144 NR0 H031 H N N 145 NR0 H051 H N N 146 NR0 HA H N N 147 NR0 H081 H N N 148 NR0 H082 H N N 149 NR0 H H N N 150 NR0 H2 H N N 151 NR0 H191 H N N 152 NR0 H192 H N N 153 NR0 HXT H N N 154 NRL C10 C N N 155 NRL C14 C N N 156 NRL C17 C N N 157 NRL C18 C N N 158 NRL O21 O N N 159 NRL C C N N 160 NRL C03 C N N 161 NRL C05 C N R 162 NRL CA C N R 163 NRL C08 C N N 164 NRL C11 C N N 165 NRL C12 C N N 166 NRL C16 C N N 167 NRL N04 N N N 168 NRL N N N N 169 NRL N13 N N N 170 NRL N15 N N N 171 NRL N19 N N N 172 NRL O O N N 173 NRL O09 O N N 174 NRL O22 O N N 175 NRL H101 H N N 176 NRL H102 H N N 177 NRL H171 H N N 178 NRL H181 H N N 179 NRL HXT H N N 180 NRL H032 H N N 181 NRL H031 H N N 182 NRL H051 H N N 183 NRL HA H N N 184 NRL H082 H N N 185 NRL H081 H N N 186 NRL H122 H N N 187 NRL H121 H N N 188 NRL H H N N 189 NRL H2 H N N 190 NRL H192 H N N 191 NRL H191 H N N 192 NRL OXT O N N 193 NSF C10 C N N 194 NSF C12 C N N 195 NSF C11 C N N 196 NSF C16 C N N 197 NSF C14 C N N 198 NSF C17 C N N 199 NSF C18 C N N 200 NSF C C N N 201 NSF C03 C N N 202 NSF C05 C N R 203 NSF CA C N R 204 NSF C08 C N N 205 NSF O09 O N N 206 NSF N04 N N N 207 NSF N N N N 208 NSF N13 N N N 209 NSF N15 N N N 210 NSF O O N N 211 NSF O20 O N N 212 NSF O21 O N N 213 NSF O22 O N N 214 NSF I1 I N N 215 NSF H102 H N N 216 NSF H101 H N N 217 NSF H122 H N N 218 NSF H121 H N N 219 NSF H181 H N N 220 NSF HXT H N N 221 NSF H031 H N N 222 NSF H032 H N N 223 NSF H051 H N N 224 NSF HA H N N 225 NSF H082 H N N 226 NSF H081 H N N 227 NSF H H N N 228 NSF H2 H N N 229 NSF H151 H N N 230 NSF OXT O N N 231 NSU C10 C N N 232 NSU C C N N 233 NSU C03 C N N 234 NSU C05 C N R 235 NSU CA C N R 236 NSU C08 C N N 237 NSU O09 O N N 238 NSU C11 C N N 239 NSU C12 C N N 240 NSU C14 C N N 241 NSU C16 C N N 242 NSU C17 C N N 243 NSU C18 C N N 244 NSU C19 C N N 245 NSU N04 N N N 246 NSU N N N N 247 NSU N13 N N N 248 NSU N15 N N N 249 NSU O O N N 250 NSU O20 O N N 251 NSU O21 O N N 252 NSU O22 O N N 253 NSU H102 H N N 254 NSU H101 H N N 255 NSU HXT H N N 256 NSU H031 H N N 257 NSU H032 H N N 258 NSU H051 H N N 259 NSU HA H N N 260 NSU H082 H N N 261 NSU H081 H N N 262 NSU H121 H N N 263 NSU H122 H N N 264 NSU H181 H N N 265 NSU H192 H N N 266 NSU H193 H N N 267 NSU H191 H N N 268 NSU H H N N 269 NSU H2 H N N 270 NSU H151 H N N 271 NSU OXT O N N 272 XDV N10 N N N 273 XDV C02 C N N 274 XDV C03 C N N 275 XDV C05 C N N 276 XDV C06 C N N 277 XDV C08 C N N 278 XDV C09 C N N 279 XDV N01 N N N 280 XDV O04 O N N 281 XDV O07 O N N 282 XDV O11 O N N 283 XDV H101 H N N 284 XDV H102 H N N 285 XDV H021 H N N 286 XDV H022 H N N 287 XDV H032 H N N 288 XDV H031 H N N 289 XDV H052 H N N 290 XDV H051 H N N 291 XDV H062 H N N 292 XDV H061 H N N 293 XDV H082 H N N 294 XDV H081 H N N 295 XDV H1 H N N 296 XDV H2 H N N 297 ZN ZN ZN N N 298 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DG OP3 P sing N N 39 DG OP3 HOP3 sing N N 40 DG P OP1 doub N N 41 DG P OP2 sing N N 42 DG P "O5'" sing N N 43 DG OP2 HOP2 sing N N 44 DG "O5'" "C5'" sing N N 45 DG "C5'" "C4'" sing N N 46 DG "C5'" "H5'" sing N N 47 DG "C5'" "H5''" sing N N 48 DG "C4'" "O4'" sing N N 49 DG "C4'" "C3'" sing N N 50 DG "C4'" "H4'" sing N N 51 DG "O4'" "C1'" sing N N 52 DG "C3'" "O3'" sing N N 53 DG "C3'" "C2'" sing N N 54 DG "C3'" "H3'" sing N N 55 DG "O3'" "HO3'" sing N N 56 DG "C2'" "C1'" sing N N 57 DG "C2'" "H2'" sing N N 58 DG "C2'" "H2''" sing N N 59 DG "C1'" N9 sing N N 60 DG "C1'" "H1'" sing N N 61 DG N9 C8 sing Y N 62 DG N9 C4 sing Y N 63 DG C8 N7 doub Y N 64 DG C8 H8 sing N N 65 DG N7 C5 sing Y N 66 DG C5 C6 sing N N 67 DG C5 C4 doub Y N 68 DG C6 O6 doub N N 69 DG C6 N1 sing N N 70 DG N1 C2 sing N N 71 DG N1 H1 sing N N 72 DG C2 N2 sing N N 73 DG C2 N3 doub N N 74 DG N2 H21 sing N N 75 DG N2 H22 sing N N 76 DG N3 C4 sing N N 77 DT OP3 P sing N N 78 DT OP3 HOP3 sing N N 79 DT P OP1 doub N N 80 DT P OP2 sing N N 81 DT P "O5'" sing N N 82 DT OP2 HOP2 sing N N 83 DT "O5'" "C5'" sing N N 84 DT "C5'" "C4'" sing N N 85 DT "C5'" "H5'" sing N N 86 DT "C5'" "H5''" sing N N 87 DT "C4'" "O4'" sing N N 88 DT "C4'" "C3'" sing N N 89 DT "C4'" "H4'" sing N N 90 DT "O4'" "C1'" sing N N 91 DT "C3'" "O3'" sing N N 92 DT "C3'" "C2'" sing N N 93 DT "C3'" "H3'" sing N N 94 DT "O3'" "HO3'" sing N N 95 DT "C2'" "C1'" sing N N 96 DT "C2'" "H2'" sing N N 97 DT "C2'" "H2''" sing N N 98 DT "C1'" N1 sing N N 99 DT "C1'" "H1'" sing N N 100 DT N1 C2 sing N N 101 DT N1 C6 sing N N 102 DT C2 O2 doub N N 103 DT C2 N3 sing N N 104 DT N3 C4 sing N N 105 DT N3 H3 sing N N 106 DT C4 O4 doub N N 107 DT C4 C5 sing N N 108 DT C5 C7 sing N N 109 DT C5 C6 doub N N 110 DT C7 H71 sing N N 111 DT C7 H72 sing N N 112 DT C7 H73 sing N N 113 DT C6 H6 sing N N 114 HOH O H1 sing N N 115 HOH O H2 sing N N 116 NR0 O C doub N N 117 NR0 C C03 sing N N 118 NR0 C03 N04 sing N N 119 NR0 C10 O09 sing N N 120 NR0 C10 C05 sing N N 121 NR0 N04 C05 sing N N 122 NR0 N04 C11 sing N N 123 NR0 O09 C08 sing N N 124 NR0 O23 C11 doub N N 125 NR0 C05 CA sing N N 126 NR0 C11 C12 sing N N 127 NR0 CA C08 sing N N 128 NR0 CA N sing N N 129 NR0 C21 N22 doub Y N 130 NR0 C21 N20 sing Y N 131 NR0 N22 C16 sing Y N 132 NR0 N20 C18 doub Y N 133 NR0 C12 N13 sing N N 134 NR0 C16 N13 sing Y N 135 NR0 C16 C17 doub Y N 136 NR0 N13 C14 sing Y N 137 NR0 C18 C17 sing Y N 138 NR0 C18 N19 sing N N 139 NR0 C17 N15 sing Y N 140 NR0 C14 N15 doub Y N 141 NR0 C10 H102 sing N N 142 NR0 C10 H101 sing N N 143 NR0 C12 H121 sing N N 144 NR0 C12 H122 sing N N 145 NR0 C14 H141 sing N N 146 NR0 C21 H211 sing N N 147 NR0 C OXT sing N N 148 NR0 C03 H032 sing N N 149 NR0 C03 H031 sing N N 150 NR0 C05 H051 sing N N 151 NR0 CA HA sing N N 152 NR0 C08 H081 sing N N 153 NR0 C08 H082 sing N N 154 NR0 N H sing N N 155 NR0 N H2 sing N N 156 NR0 N19 H191 sing N N 157 NR0 N19 H192 sing N N 158 NR0 OXT HXT sing N N 159 NRL O C doub N N 160 NRL C C03 sing N N 161 NRL C03 N04 sing N N 162 NRL O09 C10 sing N N 163 NRL O09 C08 sing N N 164 NRL C10 C05 sing N N 165 NRL C08 CA sing N N 166 NRL CA C05 sing N N 167 NRL CA N sing N N 168 NRL N04 C05 sing N N 169 NRL N04 C11 sing N N 170 NRL O22 C11 doub N N 171 NRL C11 C12 sing N N 172 NRL C12 N13 sing N N 173 NRL O21 C14 doub N N 174 NRL N13 C14 sing N N 175 NRL N13 C18 sing N N 176 NRL C14 N15 sing N N 177 NRL C18 C17 doub N N 178 NRL N15 C16 doub N N 179 NRL C17 C16 sing N N 180 NRL C16 N19 sing N N 181 NRL C10 H101 sing N N 182 NRL C10 H102 sing N N 183 NRL C17 H171 sing N N 184 NRL C18 H181 sing N N 185 NRL C03 H032 sing N N 186 NRL C03 H031 sing N N 187 NRL C05 H051 sing N N 188 NRL CA HA sing N N 189 NRL C08 H082 sing N N 190 NRL C08 H081 sing N N 191 NRL C12 H122 sing N N 192 NRL C12 H121 sing N N 193 NRL N H sing N N 194 NRL N H2 sing N N 195 NRL N19 H192 sing N N 196 NRL N19 H191 sing N N 197 NRL C OXT sing N N 198 NRL OXT HXT sing N N 199 NSF O20 C16 doub N N 200 NSF N15 C16 sing N N 201 NSF N15 C14 sing N N 202 NSF O21 C14 doub N N 203 NSF C16 C17 sing N N 204 NSF C14 N13 sing N N 205 NSF O C doub N N 206 NSF C17 C18 doub N N 207 NSF C17 I1 sing N N 208 NSF N13 C18 sing N N 209 NSF N13 C12 sing N N 210 NSF C12 C11 sing N N 211 NSF C C03 sing N N 212 NSF O22 C11 doub N N 213 NSF C11 N04 sing N N 214 NSF N04 C03 sing N N 215 NSF N04 C05 sing N N 216 NSF C10 C05 sing N N 217 NSF C10 O09 sing N N 218 NSF C05 CA sing N N 219 NSF O09 C08 sing N N 220 NSF CA C08 sing N N 221 NSF CA N sing N N 222 NSF C10 H102 sing N N 223 NSF C10 H101 sing N N 224 NSF C12 H122 sing N N 225 NSF C12 H121 sing N N 226 NSF C18 H181 sing N N 227 NSF C03 H031 sing N N 228 NSF C03 H032 sing N N 229 NSF C05 H051 sing N N 230 NSF CA HA sing N N 231 NSF C08 H082 sing N N 232 NSF C08 H081 sing N N 233 NSF N H sing N N 234 NSF N H2 sing N N 235 NSF N15 H151 sing N N 236 NSF C OXT sing N N 237 NSF OXT HXT sing N N 238 NSU O C doub N N 239 NSU C C03 sing N N 240 NSU C03 N04 sing N N 241 NSU C10 O09 sing N N 242 NSU C10 C05 sing N N 243 NSU N04 C05 sing N N 244 NSU N04 C11 sing N N 245 NSU O09 C08 sing N N 246 NSU C05 CA sing N N 247 NSU CA C08 sing N N 248 NSU CA N sing N N 249 NSU O22 C11 doub N N 250 NSU C11 C12 sing N N 251 NSU O21 C14 doub N N 252 NSU C12 N13 sing N N 253 NSU C14 N13 sing N N 254 NSU C14 N15 sing N N 255 NSU N13 C18 sing N N 256 NSU N15 C16 sing N N 257 NSU C18 C17 doub N N 258 NSU C16 C17 sing N N 259 NSU C16 O20 doub N N 260 NSU C17 C19 sing N N 261 NSU C10 H102 sing N N 262 NSU C10 H101 sing N N 263 NSU C03 H031 sing N N 264 NSU C03 H032 sing N N 265 NSU C05 H051 sing N N 266 NSU CA HA sing N N 267 NSU C08 H082 sing N N 268 NSU C08 H081 sing N N 269 NSU C12 H121 sing N N 270 NSU C12 H122 sing N N 271 NSU C18 H181 sing N N 272 NSU C19 H192 sing N N 273 NSU C19 H193 sing N N 274 NSU C19 H191 sing N N 275 NSU N H sing N N 276 NSU N H2 sing N N 277 NSU N15 H151 sing N N 278 NSU C OXT sing N N 279 NSU OXT HXT sing N N 280 XDV N01 C02 sing N N 281 XDV C02 C03 sing N N 282 XDV O04 C03 sing N N 283 XDV O04 C05 sing N N 284 XDV C05 C06 sing N N 285 XDV C06 O07 sing N N 286 XDV O07 C08 sing N N 287 XDV C08 C09 sing N N 288 XDV O11 C09 doub N N 289 XDV C09 N10 sing N N 290 XDV N10 H101 sing N N 291 XDV N10 H102 sing N N 292 XDV C02 H021 sing N N 293 XDV C02 H022 sing N N 294 XDV C03 H032 sing N N 295 XDV C03 H031 sing N N 296 XDV C05 H052 sing N N 297 XDV C05 H051 sing N N 298 XDV C06 H062 sing N N 299 XDV C06 H061 sing N N 300 XDV C08 H082 sing N N 301 XDV C08 H081 sing N N 302 XDV N01 H1 sing N N 303 XDV N01 H2 sing N N 304 # _ndb_struct_conf_na.entry_id 7UID _ndb_struct_conf_na.feature 'double helix' # _ndb_struct_na_base_pair.model_number 1 _ndb_struct_na_base_pair.i_label_asym_id A _ndb_struct_na_base_pair.i_label_comp_id DA _ndb_struct_na_base_pair.i_label_seq_id 9 _ndb_struct_na_base_pair.i_symmetry 1_555 _ndb_struct_na_base_pair.j_label_asym_id B _ndb_struct_na_base_pair.j_label_comp_id DG _ndb_struct_na_base_pair.j_label_seq_id 1 _ndb_struct_na_base_pair.j_symmetry 1_555 _ndb_struct_na_base_pair.shear -3.687 _ndb_struct_na_base_pair.stretch 3.295 _ndb_struct_na_base_pair.stagger -1.316 _ndb_struct_na_base_pair.buckle 1.755 _ndb_struct_na_base_pair.propeller 27.478 _ndb_struct_na_base_pair.opening 39.727 _ndb_struct_na_base_pair.pair_number 1 _ndb_struct_na_base_pair.pair_name A_DA9:DG1_C _ndb_struct_na_base_pair.i_auth_asym_id A _ndb_struct_na_base_pair.i_auth_seq_id 9 _ndb_struct_na_base_pair.i_PDB_ins_code ? _ndb_struct_na_base_pair.j_auth_asym_id C _ndb_struct_na_base_pair.j_auth_seq_id 1 _ndb_struct_na_base_pair.j_PDB_ins_code ? _ndb_struct_na_base_pair.hbond_type_28 10 _ndb_struct_na_base_pair.hbond_type_12 5 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ZIA-DK031143 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 7UID _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.018421 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015601 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014036 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL H I N O P ZN # loop_ #