HEADER TOXIN 06-APR-22 7UMA TITLE CRYSTAL STRUCTURE OF TLDE1A FROM SALMONELLA TYPHIMURIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: TLDE1A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MUREIN L,D-TRANSPEPTIDASE, SCIV PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE CONSTRUCT HAS A HIS-TAG AT THE CARBOXY-TERMINUS, COMPND 7 BUT THE TAG INTERACTS WITH THE ACTIVE SITE OF A SYMMETRY-RELATED COPY COMPND 8 OF THE PROTEIN.; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: HIS-HIS-HIS-HIS; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: HIS-TAG FROM A SYMMETRY-RELATED COPY OF THE TLDE1A COMPND 14 CONSTRUCT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM; SOURCE 4 ORGANISM_TAXID: 90371; SOURCE 5 GENE: SCIV; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: GOLD; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 14 EXPRESSION_SYSTEM_STRAIN: GOLD KEYWDS TYPE VI SECRETION SYSTEM, SALMONELLA TYPHIMURIUM, L, D- KEYWDS 2 CARBOXYPEPTIDASE, D-TRANSPEPTIDASE, PEPTIDOGLYCAN, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR N.LORENTE COBO,G.PREHNA REVDAT 4 03-APR-24 7UMA 1 REMARK REVDAT 3 16-NOV-22 7UMA 1 JRNL REVDAT 2 09-NOV-22 7UMA 1 REMARK REVDAT 1 02-NOV-22 7UMA 0 JRNL AUTH N.LORENTE COBO,S.SIBINELLI-SOUSA,J.BIBOY,W.VOLLMER, JRNL AUTH 2 E.BAYER-SANTOS,G.PREHNA JRNL TITL MOLECULAR CHARACTERIZATION OF THE TYPE VI SECRETION SYSTEM JRNL TITL 2 EFFECTOR TLDE1A REVEALS A STRUCTURALLY ALTERED JRNL TITL 3 LD-TRANSPEPTIDASE FOLD. JRNL REF J.BIOL.CHEM. V. 298 02556 2022 JRNL REFN ESSN 1083-351X JRNL PMID 36183829 JRNL DOI 10.1016/J.JBC.2022.102556 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 25275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.6900 - 3.3400 1.00 2870 163 0.1652 0.1798 REMARK 3 2 3.3400 - 2.6500 1.00 2729 128 0.1626 0.1915 REMARK 3 3 2.6500 - 2.3100 1.00 2709 127 0.1591 0.1810 REMARK 3 4 2.3100 - 2.1000 1.00 2646 141 0.1495 0.1602 REMARK 3 5 2.1000 - 1.9500 1.00 2642 143 0.1558 0.1933 REMARK 3 6 1.9500 - 1.8400 1.00 2664 125 0.1661 0.1982 REMARK 3 7 1.8400 - 1.7400 1.00 2589 152 0.1719 0.1802 REMARK 3 8 1.7400 - 1.6700 1.00 2653 125 0.1850 0.2421 REMARK 3 9 1.6700 - 1.6000 0.98 2546 123 0.2407 0.2787 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.151 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.081 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1464 REMARK 3 ANGLE : 0.934 1984 REMARK 3 CHIRALITY : 0.065 195 REMARK 3 PLANARITY : 0.009 256 REMARK 3 DIHEDRAL : 13.586 525 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6069 24.4010 44.5610 REMARK 3 T TENSOR REMARK 3 T11: 0.0836 T22: 0.1291 REMARK 3 T33: 0.0748 T12: 0.0183 REMARK 3 T13: 0.0221 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 2.3857 L22: 7.3651 REMARK 3 L33: 5.7341 L12: 3.6287 REMARK 3 L13: 2.4817 L23: 2.0634 REMARK 3 S TENSOR REMARK 3 S11: 0.0591 S12: -0.2916 S13: 0.1591 REMARK 3 S21: 0.0800 S22: -0.0572 S23: 0.1299 REMARK 3 S31: -0.1506 S32: -0.0663 S33: 0.0075 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0974 20.9636 37.7351 REMARK 3 T TENSOR REMARK 3 T11: 0.0554 T22: 0.1228 REMARK 3 T33: 0.0712 T12: 0.0234 REMARK 3 T13: -0.0006 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 2.1958 L22: 6.6319 REMARK 3 L33: 3.3798 L12: 1.6577 REMARK 3 L13: 1.1218 L23: 2.4684 REMARK 3 S TENSOR REMARK 3 S11: -0.0989 S12: -0.0008 S13: 0.1381 REMARK 3 S21: -0.2065 S22: 0.0314 S23: 0.3281 REMARK 3 S31: -0.1354 S32: -0.1646 S33: 0.0736 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5696 9.2821 36.8680 REMARK 3 T TENSOR REMARK 3 T11: 0.1056 T22: 0.1031 REMARK 3 T33: 0.1588 T12: -0.0094 REMARK 3 T13: -0.0231 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 7.6688 L22: 8.1410 REMARK 3 L33: 2.1640 L12: 0.8057 REMARK 3 L13: -1.4090 L23: 2.2007 REMARK 3 S TENSOR REMARK 3 S11: 0.1147 S12: -0.0965 S13: -0.6071 REMARK 3 S21: 0.0253 S22: -0.0627 S23: -0.0367 REMARK 3 S31: 0.1458 S32: -0.3074 S33: -0.0907 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6507 24.0145 36.9797 REMARK 3 T TENSOR REMARK 3 T11: 0.1013 T22: 0.1832 REMARK 3 T33: 0.1318 T12: -0.0432 REMARK 3 T13: -0.0008 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 1.6972 L22: 8.4981 REMARK 3 L33: 6.2576 L12: 0.8753 REMARK 3 L13: 0.0950 L23: -5.9813 REMARK 3 S TENSOR REMARK 3 S11: -0.0565 S12: 0.2549 S13: 0.0129 REMARK 3 S21: 0.1412 S22: -0.0712 S23: -0.4195 REMARK 3 S31: -0.3161 S32: 0.4569 S33: 0.1378 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 56 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5284 21.1815 17.3136 REMARK 3 T TENSOR REMARK 3 T11: 0.5108 T22: 0.6544 REMARK 3 T33: 0.2034 T12: 0.0039 REMARK 3 T13: 0.0201 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 9.4766 L22: 5.2818 REMARK 3 L33: 4.9198 L12: 6.5172 REMARK 3 L13: 6.0290 L23: 5.0769 REMARK 3 S TENSOR REMARK 3 S11: 0.1409 S12: 1.2677 S13: -0.6322 REMARK 3 S21: -0.5847 S22: 0.2817 S23: -0.5898 REMARK 3 S31: 0.1541 S32: 1.3236 S33: -0.2763 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9826 24.8183 22.3963 REMARK 3 T TENSOR REMARK 3 T11: 0.1732 T22: 0.3147 REMARK 3 T33: 0.1304 T12: -0.0614 REMARK 3 T13: 0.0176 T23: 0.0166 REMARK 3 L TENSOR REMARK 3 L11: 3.2382 L22: 1.7952 REMARK 3 L33: 5.4885 L12: 0.1267 REMARK 3 L13: 2.3478 L23: -1.2653 REMARK 3 S TENSOR REMARK 3 S11: -0.1238 S12: 0.7983 S13: 0.0567 REMARK 3 S21: -0.3193 S22: 0.1423 S23: -0.0197 REMARK 3 S31: 0.0610 S32: 0.6819 S33: 0.0358 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7621 23.3236 18.9580 REMARK 3 T TENSOR REMARK 3 T11: 0.2202 T22: 0.2832 REMARK 3 T33: 0.1240 T12: -0.0637 REMARK 3 T13: 0.0022 T23: 0.0525 REMARK 3 L TENSOR REMARK 3 L11: 2.1317 L22: 1.8118 REMARK 3 L33: 6.3743 L12: 0.7612 REMARK 3 L13: 1.5517 L23: 2.5405 REMARK 3 S TENSOR REMARK 3 S11: -0.1715 S12: 0.6581 S13: 0.1944 REMARK 3 S21: -0.5410 S22: 0.1137 S23: -0.0740 REMARK 3 S31: -0.4783 S32: 0.2651 S33: 0.0167 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9042 14.2901 36.2594 REMARK 3 T TENSOR REMARK 3 T11: 0.0971 T22: 0.1149 REMARK 3 T33: 0.1723 T12: 0.0247 REMARK 3 T13: -0.0021 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 2.9834 L22: 3.5388 REMARK 3 L33: 3.7444 L12: 0.0111 REMARK 3 L13: 1.1194 L23: -1.3657 REMARK 3 S TENSOR REMARK 3 S11: 0.0891 S12: 0.0480 S13: -0.5025 REMARK 3 S21: -0.0332 S22: 0.0631 S23: -0.0776 REMARK 3 S31: 0.3268 S32: 0.2190 S33: -0.1168 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0251 28.3923 33.3240 REMARK 3 T TENSOR REMARK 3 T11: 0.1082 T22: 0.1205 REMARK 3 T33: 0.0997 T12: -0.0027 REMARK 3 T13: 0.0010 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 5.2702 L22: 6.8354 REMARK 3 L33: 4.9932 L12: 4.2675 REMARK 3 L13: 2.8529 L23: 3.3497 REMARK 3 S TENSOR REMARK 3 S11: -0.1742 S12: 0.0940 S13: 0.3094 REMARK 3 S21: -0.1874 S22: 0.0322 S23: 0.0175 REMARK 3 S31: -0.4018 S32: 0.0587 S33: 0.1366 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9147 31.1646 42.6030 REMARK 3 T TENSOR REMARK 3 T11: 0.2195 T22: 0.2411 REMARK 3 T33: 0.2377 T12: -0.0925 REMARK 3 T13: -0.0292 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 5.3809 L22: 6.8503 REMARK 3 L33: 2.6011 L12: 2.5235 REMARK 3 L13: 0.3405 L23: -0.6564 REMARK 3 S TENSOR REMARK 3 S11: 0.0621 S12: -0.1912 S13: 0.4418 REMARK 3 S21: 0.4677 S22: -0.1222 S23: -0.7265 REMARK 3 S31: -0.6433 S32: 0.4794 S33: -0.0033 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 160 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6792 19.6109 38.8103 REMARK 3 T TENSOR REMARK 3 T11: 0.0990 T22: 0.1598 REMARK 3 T33: 0.1122 T12: -0.0119 REMARK 3 T13: -0.0026 T23: -0.0490 REMARK 3 L TENSOR REMARK 3 L11: 7.8752 L22: 2.6974 REMARK 3 L33: 7.3822 L12: -1.7145 REMARK 3 L13: 2.5138 L23: -2.9081 REMARK 3 S TENSOR REMARK 3 S11: -0.0306 S12: -0.4486 S13: 0.2155 REMARK 3 S21: 0.1874 S22: 0.0435 S23: 0.1182 REMARK 3 S31: -0.1452 S32: -0.3416 S33: -0.0702 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 301 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7922 13.5830 23.9466 REMARK 3 T TENSOR REMARK 3 T11: 1.2008 T22: 0.7319 REMARK 3 T33: 0.4470 T12: -0.0929 REMARK 3 T13: 0.0190 T23: -0.0713 REMARK 3 L TENSOR REMARK 3 L11: 4.8931 L22: 8.4028 REMARK 3 L33: 3.7518 L12: -4.8365 REMARK 3 L13: 2.9000 L23: -5.5823 REMARK 3 S TENSOR REMARK 3 S11: 0.7466 S12: 2.1257 S13: -0.0099 REMARK 3 S21: -1.6431 S22: -0.4906 S23: -0.0637 REMARK 3 S31: 1.4405 S32: 0.6261 S33: -0.2073 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UMA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-APR-22. REMARK 100 THE DEPOSITION ID IS D_1000264388. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25343 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 41.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: AUTOSOL, PHENIX REMARK 200 STARTING MODEL: NAI DERIVATIVE SOLVED USING SAD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12MG/ML TLDE1A, 15% PEG 3350, 0.2M REMARK 280 AMMONIUM SULPHATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.56250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.69050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.69050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.28125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.69050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.69050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 78.84375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.69050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.69050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 26.28125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.69050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.69050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 78.84375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 52.56250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 468 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 518 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET A 2 REMARK 465 GLU C 300 REMARK 465 HIS C 305 REMARK 465 HIS C 306 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 418 O HOH A 499 1.81 REMARK 500 O HOH A 342 O HOH A 425 1.83 REMARK 500 O HIS C 304 O HOH C 501 1.90 REMARK 500 O HOH A 447 O HOH A 459 1.92 REMARK 500 O HOH A 472 O HOH A 516 1.95 REMARK 500 O4 SO4 A 201 O HOH A 301 1.97 REMARK 500 OH CME A 131 O HOH A 302 1.99 REMARK 500 OE2 GLU A 105 O HOH A 303 2.11 REMARK 500 N ALA A 3 O HOH A 304 2.13 REMARK 500 OD1 ASP A 29 O HOH A 305 2.13 REMARK 500 O HOH A 398 O HOH A 471 2.15 REMARK 500 O2 SO4 A 203 O HOH A 306 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 72 76.24 -106.26 REMARK 500 HIS C 303 27.27 -140.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 HIS C 301 13.92 REMARK 500 REMARK 500 REMARK: NULL DBREF 7UMA A 1 173 UNP H9L4J5 H9L4J5_SALTM 1 173 DBREF 7UMA C 300 306 PDB 7UMA 7UMA 300 306 SEQADV 7UMA GLY A 174 UNP H9L4J5 EXPRESSION TAG SEQRES 1 A 174 MET MET ALA VAL ARG LEU THR PHE ASP GLY GLN LYS LEU SEQRES 2 A 174 THR TRP PRO GLY ILE GLY ILE PHE LYS ALA THR THR GLY SEQRES 3 A 174 LEU PRO ASP LEU GLN TRP PRO ASP LYS GLN CYS VAL PRO SEQRES 4 A 174 ASP ALA ALA ILE PRO GLU GLY ASN TYR LYS LEU PHE ILE SEQRES 5 A 174 GLN PHE GLN GLY GLU ALA PRO ILE ARG ASN ALA ALA ASP SEQRES 6 A 174 CYS ASP LEU GLY PRO SER TRP GLY TRP SER THR ILE PRO SEQRES 7 A 174 ARG GLY GLN ALA ALA GLY THR CYS GLU ILE TYR TRP ALA SEQRES 8 A 174 ASN TRP GLY TYR ASN ARG ILE ARG LEU GLU SER ALA ASP SEQRES 9 A 174 GLU LYS THR ARG LYS ALA CYS GLY GLY LYS ARG GLY GLY SEQRES 10 A 174 PHE TYR ILE HIS ASP SER THR LYS GLY TYR SER HIS GLY SEQRES 11 A 174 CME ILE GLU VAL GLU PRO VAL PHE PHE ARG ILE LEU LYS SEQRES 12 A 174 GLN GLU THR GLU LYS GLU ASN GLY GLU LYS THR PHE THR SEQRES 13 A 174 VAL ASN VAL LYS TYR VAL SER GLY GLN GLN THR ASN GLY SEQRES 14 A 174 GLY THR LYS GLN GLY SEQRES 1 C 7 GLU HIS HIS HIS HIS HIS HIS MODRES 7UMA CME A 131 CYS MODIFIED RESIDUE HET CME A 131 18 HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET SO4 A 204 5 HET SO4 C 401 5 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM SO4 SULFATE ION FORMUL 1 CME C5 H11 N O3 S2 FORMUL 3 SO4 5(O4 S 2-) FORMUL 8 HOH *232(H2 O) HELIX 1 AA1 TRP A 32 GLN A 36 5 5 HELIX 2 AA2 PRO A 78 ALA A 83 5 6 HELIX 3 AA3 GLY A 84 TRP A 90 1 7 HELIX 4 AA4 ALA A 91 TRP A 93 5 3 HELIX 5 AA5 ASP A 104 ALA A 110 1 7 HELIX 6 AA6 CYS A 111 LYS A 114 5 4 HELIX 7 AA7 PRO A 136 GLU A 147 1 12 SHEET 1 AA111 PHE A 54 GLU A 57 0 SHEET 2 AA111 TRP A 74 THR A 76 1 O TRP A 74 N GLN A 55 SHEET 3 AA111 ASN A 96 SER A 102 -1 O ARG A 97 N SER A 75 SHEET 4 AA111 TYR A 119 HIS A 121 -1 O ILE A 120 N ILE A 98 SHEET 5 AA111 SER A 128 VAL A 134 1 O VAL A 134 N HIS A 121 SHEET 6 AA111 GLY A 19 GLY A 26 -1 N THR A 24 O GLU A 133 SHEET 7 AA111 LYS A 12 TRP A 15 -1 N LEU A 13 O PHE A 21 SHEET 8 AA111 VAL A 4 PHE A 8 -1 N THR A 7 O THR A 14 SHEET 9 AA111 PHE A 155 VAL A 159 1 O THR A 156 N LEU A 6 SHEET 10 AA111 GLY A 46 PHE A 51 -1 N GLY A 46 O VAL A 159 SHEET 11 AA111 ASN A 96 SER A 102 -1 O GLU A 101 N LYS A 49 SHEET 1 AA2 2 ILE A 60 ASN A 62 0 SHEET 2 AA2 2 ASP A 67 LEU A 68 -1 O ASP A 67 N ASN A 62 SSBOND 1 CYS A 37 CYS A 111 1555 1555 2.05 SSBOND 2 CYS A 66 CYS A 86 1555 1555 2.04 LINK C GLY A 130 N CME A 131 1555 1555 1.33 LINK C CME A 131 N ILE A 132 1555 1555 1.33 CRYST1 59.381 59.381 105.125 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016840 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009512 0.00000