HEADER DE NOVO PROTEIN 11-APR-22 7UNI TITLE DE NOVO DESIGNED CHLOROPHYLL DIMER PROTEIN WITH ZN PHEOPHORBIDE A TITLE 2 METHYL ESTER, SP2-ZNPPAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SP2-ZNPPAM DESIGNED CHLOROPHYLL DIMER PROTEIN; COMPND 3 CHAIN: A, C, B, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DESIGN, HOMODIMER, ROSETTA, SYMMETRIC, DESIGNED, CIRCULAR TANDEM KEYWDS 2 REPEAT PROTEIN, CTRP, CHLOROPHYLL, ZN PHEOPHORBIDE A METHYL ESTER, KEYWDS 3 ZN, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.A.KENNEDY,B.L.STODDARD,N.M.ENNIST REVDAT 2 03-APR-24 7UNI 1 REMARK REVDAT 1 19-APR-23 7UNI 0 JRNL AUTH M.A.KENNEDY,B.L.STODDARD,N.M.ENNIST JRNL TITL DE NOVO DESIGNED CHLOROPHYLL DIMER PROTEIN WITH ZN JRNL TITL 2 PHEOPHORBIDE A METHYL ESTER, SP2-ZNPPAM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 31284 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.820 REMARK 3 FREE R VALUE TEST SET COUNT : 1195 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2600 - 5.2000 0.93 3214 125 0.1764 0.2303 REMARK 3 2 5.2000 - 4.1300 0.93 3222 129 0.1811 0.2209 REMARK 3 3 4.1300 - 3.6100 0.95 3311 137 0.1804 0.2384 REMARK 3 4 3.6100 - 3.2800 0.97 3366 124 0.2030 0.2624 REMARK 3 5 3.2800 - 3.0400 0.98 3397 135 0.2431 0.2756 REMARK 3 6 3.0400 - 2.8600 0.98 3392 134 0.2370 0.3076 REMARK 3 7 2.8600 - 2.7200 0.98 3402 141 0.2276 0.3080 REMARK 3 8 2.7200 - 2.6000 0.98 3388 126 0.2436 0.2782 REMARK 3 9 2.6000 - 2.5000 0.98 3397 144 0.2546 0.3091 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 0.5083 5.2331 27.7494 REMARK 3 T TENSOR REMARK 3 T11: 0.2983 T22: 0.3654 REMARK 3 T33: 0.5071 T12: 0.0036 REMARK 3 T13: -0.0096 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 0.0772 L22: 0.3297 REMARK 3 L33: 1.5589 L12: 0.0197 REMARK 3 L13: -0.0443 L23: 0.4392 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: -0.0559 S13: -0.0357 REMARK 3 S21: 0.0188 S22: -0.0500 S23: -0.0108 REMARK 3 S31: -0.0128 S32: -0.0366 S33: 0.0428 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UNI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-APR-22. REMARK 100 THE DEPOSITION ID IS D_1000264350. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52741 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 49.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 60.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 1.29700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: COMPUTATIONALLY GENERATED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 3350, 100MM AMMONIUM SULFATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 SER A 0 REMARK 465 SER C -5 REMARK 465 GLY C -4 REMARK 465 SER C -3 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 SER C 0 REMARK 465 THR C 243 REMARK 465 ASN C 244 REMARK 465 SER B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 SER D -5 REMARK 465 GLY D -4 REMARK 465 SER D -3 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 SER D 0 REMARK 465 ASP D 1 REMARK 465 GLU D 2 REMARK 465 ASN D 48 REMARK 465 GLY D 49 REMARK 465 ASP D 50 REMARK 465 LYS D 51 REMARK 465 SER D 52 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 2 CG CD OE1 OE2 REMARK 470 GLU A 3 CD OE1 OE2 REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 LYS A 12 CD CE NZ REMARK 470 GLU A 19 CD OE1 OE2 REMARK 470 GLN A 29 CD OE1 NE2 REMARK 470 GLU A 30 OE1 OE2 REMARK 470 LYS A 36 CE NZ REMARK 470 LYS A 37 CE NZ REMARK 470 ARG A 44 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 47 CD NE CZ NH1 NH2 REMARK 470 ASN A 48 OD1 ND2 REMARK 470 ASP A 50 CG OD1 OD2 REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 SER A 52 OG REMARK 470 GLU A 53 CG CD OE1 OE2 REMARK 470 ARG A 56 NH1 NH2 REMARK 470 GLU A 59 CD OE1 OE2 REMARK 470 GLU A 83 CG CD OE1 OE2 REMARK 470 GLU A 86 CD OE1 OE2 REMARK 470 MET A 87 CE REMARK 470 LYS A 96 CE NZ REMARK 470 GLU A 97 OE1 OE2 REMARK 470 ARG A 100 CD NE CZ NH1 NH2 REMARK 470 ASP A 106 CG OD1 OD2 REMARK 470 GLN A 107 CG CD OE1 NE2 REMARK 470 GLU A 108 CD OE1 OE2 REMARK 470 GLN A 113 CD OE1 NE2 REMARK 470 GLU A 139 CD OE1 OE2 REMARK 470 GLU A 142 CG CD OE1 OE2 REMARK 470 LYS A 145 CG CD CE NZ REMARK 470 GLU A 149 OE2 REMARK 470 GLU A 150 OE1 OE2 REMARK 470 LYS A 152 CG CD CE NZ REMARK 470 LYS A 163 NZ REMARK 470 GLU A 164 CD OE1 OE2 REMARK 470 LYS A 165 NZ REMARK 470 LYS A 206 CD CE NZ REMARK 470 GLU A 209 CD OE1 OE2 REMARK 470 GLU A 212 CD OE1 OE2 REMARK 470 LYS A 216 CE NZ REMARK 470 ASP A 218 OD1 OD2 REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 GLN A 221 CD OE1 NE2 REMARK 470 ARG A 224 NE CZ NH1 NH2 REMARK 470 GLN A 225 CD OE1 NE2 REMARK 470 ASN A 244 CG OD1 ND2 REMARK 470 GLU C 2 CG CD OE1 OE2 REMARK 470 GLU C 3 CD OE1 OE2 REMARK 470 LYS C 5 CG CD CE NZ REMARK 470 LYS C 12 CE NZ REMARK 470 GLU C 27 CG CD OE1 OE2 REMARK 470 GLU C 30 CG CD OE1 OE2 REMARK 470 LYS C 36 CE NZ REMARK 470 LYS C 37 CE NZ REMARK 470 GLU C 38 CD OE1 OE2 REMARK 470 GLU C 43 OE1 OE2 REMARK 470 ASN C 48 CG OD1 ND2 REMARK 470 LYS C 51 CG CD CE NZ REMARK 470 GLU C 53 CD OE1 OE2 REMARK 470 GLU C 59 CG CD OE1 OE2 REMARK 470 ILE C 85 CD1 REMARK 470 GLU C 86 OE1 OE2 REMARK 470 ARG C 90 NE CZ NH1 NH2 REMARK 470 LYS C 93 CG CD CE NZ REMARK 470 GLN C 94 CD OE1 NE2 REMARK 470 LYS C 96 CG CD CE NZ REMARK 470 GLU C 97 CD OE1 OE2 REMARK 470 ILE C 99 CD1 REMARK 470 ARG C 100 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 107 CG CD OE1 NE2 REMARK 470 GLU C 108 CG CD OE1 OE2 REMARK 470 ARG C 115 CD NE CZ NH1 NH2 REMARK 470 LEU C 131 CG CD1 CD2 REMARK 470 LYS C 145 CG CD CE NZ REMARK 470 GLU C 149 OE1 OE2 REMARK 470 GLU C 150 CG CD OE1 OE2 REMARK 470 LYS C 152 CG CD CE NZ REMARK 470 GLN C 153 CD OE1 NE2 REMARK 470 GLU C 156 CG CD OE1 OE2 REMARK 470 LYS C 163 CG CD CE NZ REMARK 470 GLU C 164 CD OE1 OE2 REMARK 470 LYS C 165 CG CD CE NZ REMARK 470 ASN C 188 CG OD1 ND2 REMARK 470 LEU C 189 CG CD1 CD2 REMARK 470 THR C 192 OG1 CG2 REMARK 470 ARG C 195 CD NE CZ NH1 NH2 REMARK 470 GLN C 197 CG CD OE1 NE2 REMARK 470 GLN C 198 CG CD OE1 NE2 REMARK 470 GLN C 199 CG CD OE1 NE2 REMARK 470 LYS C 201 CG CD CE NZ REMARK 470 GLU C 202 CG CD OE1 OE2 REMARK 470 GLU C 205 OE1 OE2 REMARK 470 LYS C 208 CG CD CE NZ REMARK 470 GLU C 212 CD OE1 OE2 REMARK 470 LYS C 216 CD CE NZ REMARK 470 GLU C 220 CD OE1 OE2 REMARK 470 GLN C 221 CG CD OE1 NE2 REMARK 470 ARG C 224 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 228 CG CD OE1 OE2 REMARK 470 GLU C 232 CG CD OE1 OE2 REMARK 470 LEU C 235 CD1 CD2 REMARK 470 VAL C 236 CG1 CG2 REMARK 470 LEU C 238 CD1 CD2 REMARK 470 ARG C 239 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 242 CG CD1 CD2 REMARK 470 SER B 0 OG REMARK 470 ASP B 1 CG OD1 OD2 REMARK 470 GLU B 2 CG CD OE1 OE2 REMARK 470 GLU B 3 CG CD OE1 OE2 REMARK 470 LYS B 5 CD CE NZ REMARK 470 LYS B 12 CE NZ REMARK 470 GLU B 19 CD OE1 OE2 REMARK 470 GLU B 30 OE1 OE2 REMARK 470 MET B 31 CE REMARK 470 GLU B 43 CD OE1 OE2 REMARK 470 ARG B 47 NE CZ NH1 NH2 REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 SER B 52 OG REMARK 470 GLU B 53 CD OE1 OE2 REMARK 470 GLU B 59 CD OE1 OE2 REMARK 470 GLU B 86 CD OE1 OE2 REMARK 470 LEU B 89 CD1 CD2 REMARK 470 ARG B 90 CD NE CZ NH1 NH2 REMARK 470 LYS B 93 CD CE NZ REMARK 470 LYS B 96 NZ REMARK 470 ARG B 100 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 108 CD OE1 OE2 REMARK 470 GLN B 113 CD OE1 NE2 REMARK 470 GLU B 149 CG CD OE1 OE2 REMARK 470 LYS B 152 CD CE NZ REMARK 470 GLN B 153 OE1 NE2 REMARK 470 LYS B 163 CD CE NZ REMARK 470 GLU B 164 CG CD OE1 OE2 REMARK 470 GLU B 202 CD OE1 OE2 REMARK 470 LYS B 206 CD CE NZ REMARK 470 LYS B 208 CE NZ REMARK 470 GLU B 212 CD OE1 OE2 REMARK 470 LYS B 216 CD CE NZ REMARK 470 GLU B 220 OE1 OE2 REMARK 470 GLN B 221 CD OE1 NE2 REMARK 470 ARG B 224 CD NE CZ NH1 NH2 REMARK 470 LEU B 230 CG CD1 CD2 REMARK 470 ASN B 244 CG OD1 ND2 REMARK 470 GLU D 3 CG CD OE1 OE2 REMARK 470 PHE D 4 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS D 5 CG CD CE NZ REMARK 470 LEU D 7 CG CD1 CD2 REMARK 470 LYS D 12 CE NZ REMARK 470 GLU D 19 CD OE1 OE2 REMARK 470 ARG D 20 CG CD NE CZ NH1 NH2 REMARK 470 THR D 24 OG1 CG2 REMARK 470 ASP D 25 CG OD1 OD2 REMARK 470 GLU D 27 CG CD OE1 OE2 REMARK 470 LEU D 28 CG CD1 CD2 REMARK 470 GLN D 29 CG CD OE1 NE2 REMARK 470 GLU D 30 CG CD OE1 OE2 REMARK 470 MET D 31 CG SD CE REMARK 470 LEU D 34 CG CD1 CD2 REMARK 470 ILE D 35 CG1 CG2 CD1 REMARK 470 LYS D 36 CG CD CE NZ REMARK 470 LYS D 37 CG CD CE NZ REMARK 470 GLU D 38 CG CD OE1 OE2 REMARK 470 LEU D 39 CG CD1 CD2 REMARK 470 GLU D 40 CG CD OE1 OE2 REMARK 470 GLN D 41 CG CD OE1 NE2 REMARK 470 GLU D 43 CG CD OE1 OE2 REMARK 470 ARG D 44 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 47 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 53 CG CD OE1 OE2 REMARK 470 GLN D 55 CG CD OE1 NE2 REMARK 470 ARG D 56 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 57 CG CD OE1 NE2 REMARK 470 PHE D 60 CD1 CD2 CE1 CE2 CZ REMARK 470 ARG D 66 NH1 NH2 REMARK 470 VAL D 68 CG1 CG2 REMARK 470 ASN D 76 OD1 ND2 REMARK 470 THR D 80 OG1 CG2 REMARK 470 ASP D 81 CG OD1 OD2 REMARK 470 GLU D 83 OE1 OE2 REMARK 470 LEU D 84 CG CD1 CD2 REMARK 470 ILE D 85 CG1 CG2 CD1 REMARK 470 GLU D 86 CG CD OE1 OE2 REMARK 470 MET D 87 CG SD CE REMARK 470 VAL D 88 CG1 CG2 REMARK 470 LEU D 89 CG CD1 CD2 REMARK 470 ARG D 90 CG CD NE CZ NH1 NH2 REMARK 470 ILE D 91 CG1 CG2 CD1 REMARK 470 LEU D 92 CG CD1 CD2 REMARK 470 GLN D 94 CG CD OE1 NE2 REMARK 470 LYS D 96 CD CE NZ REMARK 470 GLU D 97 CG CD OE1 OE2 REMARK 470 ILE D 99 CG1 CG2 CD1 REMARK 470 ARG D 100 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 103 OE1 NE2 REMARK 470 ASN D 104 CG OD1 ND2 REMARK 470 ASP D 106 CG OD1 OD2 REMARK 470 GLN D 107 CG CD OE1 NE2 REMARK 470 GLU D 108 CG CD OE1 OE2 REMARK 470 GLU D 109 CG CD OE1 OE2 REMARK 470 THR D 112 OG1 CG2 REMARK 470 GLN D 113 CG CD OE1 NE2 REMARK 470 ARG D 115 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 133 CD1 CD2 REMARK 470 GLU D 139 CD OE1 OE2 REMARK 470 LEU D 140 CD1 CD2 REMARK 470 GLU D 142 CG CD OE1 OE2 REMARK 470 LYS D 145 CG CD CE NZ REMARK 470 GLN D 146 CG CD OE1 NE2 REMARK 470 GLU D 149 CG CD OE1 OE2 REMARK 470 LYS D 152 CG CD CE NZ REMARK 470 GLN D 153 CG CD OE1 NE2 REMARK 470 ILE D 155 CG1 CG2 CD1 REMARK 470 GLU D 156 CG CD OE1 OE2 REMARK 470 ARG D 160 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 162 CG OD1 OD2 REMARK 470 LYS D 163 CG CD CE NZ REMARK 470 GLU D 164 CG CD OE1 OE2 REMARK 470 LYS D 165 CG CD CE NZ REMARK 470 LEU D 167 CG CD1 CD2 REMARK 470 ILE D 183 CD1 REMARK 470 LYS D 201 CD CE NZ REMARK 470 LYS D 206 CD CE NZ REMARK 470 LYS D 208 CD CE NZ REMARK 470 GLU D 212 CG CD OE1 OE2 REMARK 470 LYS D 216 CE NZ REMARK 470 GLU D 220 CG CD OE1 OE2 REMARK 470 GLN D 221 CG CD OE1 NE2 REMARK 470 ARG D 224 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 232 CD OE1 OE2 REMARK 470 THR D 243 OG1 CG2 REMARK 470 ASN D 244 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 106 69.78 -68.26 REMARK 500 ASN C 48 -143.87 -85.62 REMARK 500 THR C 192 65.51 -168.64 REMARK 500 ASP C 218 79.66 -166.13 REMARK 500 ALA C 240 -73.71 -58.69 REMARK 500 ALA D 123 -70.18 -43.31 REMARK 500 ALA D 159 -81.92 -56.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OE9 A 301 REMARK 610 OE9 C 301 REMARK 610 OE9 B 301 REMARK 610 OE9 D 301 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 OE9 A 301 ZN1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 178 NE2 REMARK 620 2 OE9 A 301 N2 90.1 REMARK 620 3 OE9 A 301 N3 99.1 90.6 REMARK 620 4 OE9 A 301 N1 90.4 92.5 170.0 REMARK 620 5 OE9 A 301 N4 99.5 170.3 86.6 88.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 OE9 C 301 ZN1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 178 NE2 REMARK 620 2 OE9 C 301 N2 106.2 REMARK 620 3 OE9 C 301 N3 76.4 90.0 REMARK 620 4 OE9 C 301 N1 105.8 93.5 175.2 REMARK 620 5 OE9 C 301 N4 76.8 174.5 86.3 90.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 OE9 B 301 ZN1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 178 NE2 REMARK 620 2 OE9 B 301 N2 92.0 REMARK 620 3 OE9 B 301 N3 98.8 93.4 REMARK 620 4 OE9 B 301 N1 91.3 90.9 168.9 REMARK 620 5 OE9 B 301 N4 98.8 169.2 86.0 87.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 OE9 D 301 ZN1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 178 NE2 REMARK 620 2 OE9 D 301 N2 100.8 REMARK 620 3 OE9 D 301 N3 81.2 90.2 REMARK 620 4 OE9 D 301 N1 100.5 93.9 175.2 REMARK 620 5 OE9 D 301 N4 81.7 175.4 86.3 89.4 REMARK 620 N 1 2 3 4 DBREF 7UNI A -5 244 PDB 7UNI 7UNI -5 244 DBREF 7UNI C -5 244 PDB 7UNI 7UNI -5 244 DBREF 7UNI B -5 244 PDB 7UNI 7UNI -5 244 DBREF 7UNI D -5 244 PDB 7UNI 7UNI -5 244 SEQRES 1 A 250 SER GLY SER GLY SER SER ASP GLU GLU PHE LYS PHE LEU SEQRES 2 A 250 ALA THR GLU ALA LYS MET LEU ILE THR ALA ALA GLU ARG SEQRES 3 A 250 LEU ALA GLY THR ASP PRO GLU LEU GLN GLU MET VAL ALA SEQRES 4 A 250 LEU ILE LYS LYS GLU LEU GLU GLN ALA GLU ARG THR PHE SEQRES 5 A 250 ARG ASN GLY ASP LYS SER GLU ALA GLN ARG GLN LEU GLU SEQRES 6 A 250 PHE VAL LEU THR ALA ALA ARG ALA VAL MET ASN VAL ALA SEQRES 7 A 250 ALA ALA ALA ASN ALA ALA GLY THR ASP PRO GLU LEU ILE SEQRES 8 A 250 GLU MET VAL LEU ARG ILE LEU LYS GLN LEU LYS GLU ALA SEQRES 9 A 250 ILE ARG THR PHE GLN ASN GLY ASP GLN GLU GLU ALA GLU SEQRES 10 A 250 THR GLN LEU ARG PHE VAL LEU ARG ALA ALA ILE ALA VAL SEQRES 11 A 250 ALA VAL VAL ALA ALA ALA LEU VAL LEU ALA GLY THR ASP SEQRES 12 A 250 PRO GLU LEU GLN GLU MET VAL LYS GLN ILE LEU GLU GLU SEQRES 13 A 250 LEU LYS GLN ALA ILE GLU THR PHE ALA ARG GLY ASP LYS SEQRES 14 A 250 GLU LYS ALA LEU THR GLN LEU LEU PHE VAL ALA TRP ALA SEQRES 15 A 250 ALA HIS ALA VAL ALA MET ILE ALA ALA ALA ALA ASN LEU SEQRES 16 A 250 ALA GLY THR ASP PRO ARG LEU GLN GLN GLN VAL LYS GLU SEQRES 17 A 250 ILE LEU GLU LYS LEU LYS GLU ALA ILE GLU THR PHE GLN SEQRES 18 A 250 LYS GLY ASP GLU GLU GLN ALA PHE ARG GLN LEU ALA GLU SEQRES 19 A 250 VAL LEU ALA GLU ALA ALA LEU VAL ALA LEU ARG ALA ALA SEQRES 20 A 250 LEU THR ASN SEQRES 1 C 250 SER GLY SER GLY SER SER ASP GLU GLU PHE LYS PHE LEU SEQRES 2 C 250 ALA THR GLU ALA LYS MET LEU ILE THR ALA ALA GLU ARG SEQRES 3 C 250 LEU ALA GLY THR ASP PRO GLU LEU GLN GLU MET VAL ALA SEQRES 4 C 250 LEU ILE LYS LYS GLU LEU GLU GLN ALA GLU ARG THR PHE SEQRES 5 C 250 ARG ASN GLY ASP LYS SER GLU ALA GLN ARG GLN LEU GLU SEQRES 6 C 250 PHE VAL LEU THR ALA ALA ARG ALA VAL MET ASN VAL ALA SEQRES 7 C 250 ALA ALA ALA ASN ALA ALA GLY THR ASP PRO GLU LEU ILE SEQRES 8 C 250 GLU MET VAL LEU ARG ILE LEU LYS GLN LEU LYS GLU ALA SEQRES 9 C 250 ILE ARG THR PHE GLN ASN GLY ASP GLN GLU GLU ALA GLU SEQRES 10 C 250 THR GLN LEU ARG PHE VAL LEU ARG ALA ALA ILE ALA VAL SEQRES 11 C 250 ALA VAL VAL ALA ALA ALA LEU VAL LEU ALA GLY THR ASP SEQRES 12 C 250 PRO GLU LEU GLN GLU MET VAL LYS GLN ILE LEU GLU GLU SEQRES 13 C 250 LEU LYS GLN ALA ILE GLU THR PHE ALA ARG GLY ASP LYS SEQRES 14 C 250 GLU LYS ALA LEU THR GLN LEU LEU PHE VAL ALA TRP ALA SEQRES 15 C 250 ALA HIS ALA VAL ALA MET ILE ALA ALA ALA ALA ASN LEU SEQRES 16 C 250 ALA GLY THR ASP PRO ARG LEU GLN GLN GLN VAL LYS GLU SEQRES 17 C 250 ILE LEU GLU LYS LEU LYS GLU ALA ILE GLU THR PHE GLN SEQRES 18 C 250 LYS GLY ASP GLU GLU GLN ALA PHE ARG GLN LEU ALA GLU SEQRES 19 C 250 VAL LEU ALA GLU ALA ALA LEU VAL ALA LEU ARG ALA ALA SEQRES 20 C 250 LEU THR ASN SEQRES 1 B 250 SER GLY SER GLY SER SER ASP GLU GLU PHE LYS PHE LEU SEQRES 2 B 250 ALA THR GLU ALA LYS MET LEU ILE THR ALA ALA GLU ARG SEQRES 3 B 250 LEU ALA GLY THR ASP PRO GLU LEU GLN GLU MET VAL ALA SEQRES 4 B 250 LEU ILE LYS LYS GLU LEU GLU GLN ALA GLU ARG THR PHE SEQRES 5 B 250 ARG ASN GLY ASP LYS SER GLU ALA GLN ARG GLN LEU GLU SEQRES 6 B 250 PHE VAL LEU THR ALA ALA ARG ALA VAL MET ASN VAL ALA SEQRES 7 B 250 ALA ALA ALA ASN ALA ALA GLY THR ASP PRO GLU LEU ILE SEQRES 8 B 250 GLU MET VAL LEU ARG ILE LEU LYS GLN LEU LYS GLU ALA SEQRES 9 B 250 ILE ARG THR PHE GLN ASN GLY ASP GLN GLU GLU ALA GLU SEQRES 10 B 250 THR GLN LEU ARG PHE VAL LEU ARG ALA ALA ILE ALA VAL SEQRES 11 B 250 ALA VAL VAL ALA ALA ALA LEU VAL LEU ALA GLY THR ASP SEQRES 12 B 250 PRO GLU LEU GLN GLU MET VAL LYS GLN ILE LEU GLU GLU SEQRES 13 B 250 LEU LYS GLN ALA ILE GLU THR PHE ALA ARG GLY ASP LYS SEQRES 14 B 250 GLU LYS ALA LEU THR GLN LEU LEU PHE VAL ALA TRP ALA SEQRES 15 B 250 ALA HIS ALA VAL ALA MET ILE ALA ALA ALA ALA ASN LEU SEQRES 16 B 250 ALA GLY THR ASP PRO ARG LEU GLN GLN GLN VAL LYS GLU SEQRES 17 B 250 ILE LEU GLU LYS LEU LYS GLU ALA ILE GLU THR PHE GLN SEQRES 18 B 250 LYS GLY ASP GLU GLU GLN ALA PHE ARG GLN LEU ALA GLU SEQRES 19 B 250 VAL LEU ALA GLU ALA ALA LEU VAL ALA LEU ARG ALA ALA SEQRES 20 B 250 LEU THR ASN SEQRES 1 D 250 SER GLY SER GLY SER SER ASP GLU GLU PHE LYS PHE LEU SEQRES 2 D 250 ALA THR GLU ALA LYS MET LEU ILE THR ALA ALA GLU ARG SEQRES 3 D 250 LEU ALA GLY THR ASP PRO GLU LEU GLN GLU MET VAL ALA SEQRES 4 D 250 LEU ILE LYS LYS GLU LEU GLU GLN ALA GLU ARG THR PHE SEQRES 5 D 250 ARG ASN GLY ASP LYS SER GLU ALA GLN ARG GLN LEU GLU SEQRES 6 D 250 PHE VAL LEU THR ALA ALA ARG ALA VAL MET ASN VAL ALA SEQRES 7 D 250 ALA ALA ALA ASN ALA ALA GLY THR ASP PRO GLU LEU ILE SEQRES 8 D 250 GLU MET VAL LEU ARG ILE LEU LYS GLN LEU LYS GLU ALA SEQRES 9 D 250 ILE ARG THR PHE GLN ASN GLY ASP GLN GLU GLU ALA GLU SEQRES 10 D 250 THR GLN LEU ARG PHE VAL LEU ARG ALA ALA ILE ALA VAL SEQRES 11 D 250 ALA VAL VAL ALA ALA ALA LEU VAL LEU ALA GLY THR ASP SEQRES 12 D 250 PRO GLU LEU GLN GLU MET VAL LYS GLN ILE LEU GLU GLU SEQRES 13 D 250 LEU LYS GLN ALA ILE GLU THR PHE ALA ARG GLY ASP LYS SEQRES 14 D 250 GLU LYS ALA LEU THR GLN LEU LEU PHE VAL ALA TRP ALA SEQRES 15 D 250 ALA HIS ALA VAL ALA MET ILE ALA ALA ALA ALA ASN LEU SEQRES 16 D 250 ALA GLY THR ASP PRO ARG LEU GLN GLN GLN VAL LYS GLU SEQRES 17 D 250 ILE LEU GLU LYS LEU LYS GLU ALA ILE GLU THR PHE GLN SEQRES 18 D 250 LYS GLY ASP GLU GLU GLN ALA PHE ARG GLN LEU ALA GLU SEQRES 19 D 250 VAL LEU ALA GLU ALA ALA LEU VAL ALA LEU ARG ALA ALA SEQRES 20 D 250 LEU THR ASN HET OE9 A 301 45 HET PO4 A 302 5 HET EDO A 303 4 HET PGE A 304 10 HET OE9 C 301 38 HET PO4 C 302 5 HET EDO C 303 4 HET OE9 B 301 45 HET PGE B 302 10 HET OE9 D 301 40 HETNAM OE9 [METHYL 9-ETHENYL-14-ETHYL-3-(3-METHOXY-3-OXOPROPYL)-4, HETNAM 2 OE9 8,13,18-TETRAMETHYL-20-OXOPHORBINE-21-CARBOXYLATATO(2- HETNAM 3 OE9 )-KAPPA~4~N~23~,N~24~,N~25~,N~26~]ZINC HETNAM PO4 PHOSPHATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PGE TRIETHYLENE GLYCOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 OE9 4(C36 H36 N4 O5 ZN) FORMUL 6 PO4 2(O4 P 3-) FORMUL 7 EDO 2(C2 H6 O2) FORMUL 8 PGE 2(C6 H14 O4) FORMUL 15 HOH *9(H2 O) HELIX 1 AA1 ASP A 1 GLY A 23 1 23 HELIX 2 AA2 ASP A 25 GLY A 49 1 25 HELIX 3 AA3 ASP A 50 GLY A 79 1 30 HELIX 4 AA4 ASP A 81 GLY A 105 1 25 HELIX 5 AA5 ASP A 106 GLY A 135 1 30 HELIX 6 AA6 ASP A 137 GLY A 161 1 25 HELIX 7 AA7 ASP A 162 GLY A 191 1 30 HELIX 8 AA8 ASP A 193 LYS A 216 1 24 HELIX 9 AA9 ASP A 218 LEU A 242 1 25 HELIX 10 AB1 GLU C 2 GLY C 23 1 22 HELIX 11 AB2 ASP C 25 ASN C 48 1 24 HELIX 12 AB3 ASP C 50 GLY C 79 1 30 HELIX 13 AB4 ASP C 81 ASN C 104 1 24 HELIX 14 AB5 ASP C 106 GLY C 135 1 30 HELIX 15 AB6 ASP C 137 GLY C 161 1 25 HELIX 16 AB7 ASP C 162 ALA C 190 1 29 HELIX 17 AB8 ASP C 193 LYS C 216 1 24 HELIX 18 AB9 ASP C 218 LEU C 242 1 25 HELIX 19 AC1 ASP B 1 GLY B 23 1 23 HELIX 20 AC2 ASP B 25 GLY B 49 1 25 HELIX 21 AC3 ASP B 50 GLY B 79 1 30 HELIX 22 AC4 ASP B 81 ASN B 104 1 24 HELIX 23 AC5 ASP B 106 GLY B 135 1 30 HELIX 24 AC6 ASP B 137 ARG B 160 1 24 HELIX 25 AC7 ASP B 162 ALA B 190 1 29 HELIX 26 AC8 ASP B 193 GLY B 217 1 25 HELIX 27 AC9 ASP B 218 ASN B 244 1 27 HELIX 28 AD1 PHE D 4 ALA D 22 1 19 HELIX 29 AD2 ASP D 25 THR D 45 1 21 HELIX 30 AD3 ALA D 54 GLY D 79 1 26 HELIX 31 AD4 ASP D 81 ASN D 104 1 24 HELIX 32 AD5 GLN D 107 GLY D 135 1 29 HELIX 33 AD6 ASP D 137 ARG D 160 1 24 HELIX 34 AD7 ASP D 162 GLY D 191 1 30 HELIX 35 AD8 ASP D 193 LYS D 216 1 24 HELIX 36 AD9 ASP D 218 LEU D 242 1 25 LINK NE2 HIS A 178 ZN1 OE9 A 301 1555 1555 2.46 LINK NE2 HIS C 178 ZN1 OE9 C 301 1555 1555 2.67 LINK NE2 HIS B 178 ZN1 OE9 B 301 1555 1555 2.31 LINK NE2 HIS D 178 ZN1 OE9 D 301 1555 1555 2.47 CRYST1 52.855 54.961 89.365 87.83 84.06 69.45 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018920 -0.007093 -0.001957 0.00000 SCALE2 0.000000 0.019431 -0.000032 0.00000 SCALE3 0.000000 0.000000 0.011250 0.00000