HEADER TRANSFERASE 14-APR-22 7UP6 TITLE CRYSTAL STRUCTURE OF C-TERMINAL DOMAIN OF MSK1 IN COMPLEX WITH IN TITLE 2 COVALENTLY BOUND LITERATURE RSK2 INHIBITOR PYRROLOPYRIMIDINE TITLE 3 CYANOACRYLAMIDE COMPOUND 25 (CO-CRYSTAL) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL PROTEIN S6 KINASE ALPHA-5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MSK1 CTD 414-738 DELTA PRO573-PRO596 GSG; COMPND 5 SYNONYM: S6K-ALPHA-5,90 KDA RIBOSOMAL PROTEIN S6 KINASE 5,NUCLEAR COMPND 6 MITOGEN- AND STRESS-ACTIVATED PROTEIN KINASE 1,RSK-LIKE PROTEIN COMPND 7 KINASE,RSKL; COMPND 8 EC: 2.7.11.1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RPS6KA5, MSK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MSK1, C-TERMINAL DOMAIN, PROTEIN KINASE, TRANSFERASE, PHOSPHORYLATION EXPDTA X-RAY DIFFRACTION AUTHOR J.K.YANO,J.ABENDROTH,A.HALL REVDAT 2 03-APR-24 7UP6 1 REMARK REVDAT 1 31-AUG-22 7UP6 0 JRNL AUTH A.HALL,J.ABENDROTH,M.J.BOLEJACK,T.CESKA,S.DELL'AIERA, JRNL AUTH 2 V.ELLIS,D.FOX 3RD,C.FRANCOIS,M.M.MURUTHI,C.PREVEL, JRNL AUTH 3 K.POULLENNEC,S.ROMANOV,A.VALADE,A.VANBELLINGHEN,J.YANO, JRNL AUTH 4 M.GERAERTS JRNL TITL DISCOVERY AND CHARACTERIZATION OF A NOVEL SERIES OF JRNL TITL 2 CHLOROPYRIMIDINES AS COVALENT INHIBITORS OF THE KINASE MSK1. JRNL REF ACS MED.CHEM.LETT. V. 13 1099 2022 JRNL REFN ISSN 1948-5875 JRNL PMID 35859861 JRNL DOI 10.1021/ACSMEDCHEMLETT.2C00134 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12754 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.320 REMARK 3 FREE R VALUE TEST SET COUNT : 1316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.7000 - 2.6000 0.99 1272 145 0.2035 0.2467 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2027 REMARK 3 ANGLE : 0.593 2744 REMARK 3 CHIRALITY : 0.045 311 REMARK 3 PLANARITY : 0.004 352 REMARK 3 DIHEDRAL : 14.718 1202 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -19.7424 6.2836 47.3375 REMARK 3 T TENSOR REMARK 3 T11: 0.3117 T22: 0.2483 REMARK 3 T33: 0.3487 T12: 0.0438 REMARK 3 T13: -0.0203 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 5.2511 L22: 6.0483 REMARK 3 L33: 6.3704 L12: 2.5928 REMARK 3 L13: 0.1656 L23: -1.9701 REMARK 3 S TENSOR REMARK 3 S11: 0.1166 S12: -0.1371 S13: -0.2491 REMARK 3 S21: 0.3646 S22: -0.1060 S23: -0.3889 REMARK 3 S31: 0.0718 S32: 0.1287 S33: -0.0216 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -16.6215 12.3423 39.5092 REMARK 3 T TENSOR REMARK 3 T11: 0.2354 T22: 0.2718 REMARK 3 T33: 0.2901 T12: 0.0246 REMARK 3 T13: -0.0002 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 2.6003 L22: 3.7385 REMARK 3 L33: 6.1432 L12: 1.6538 REMARK 3 L13: -0.4206 L23: -1.8577 REMARK 3 S TENSOR REMARK 3 S11: -0.0730 S12: -0.2590 S13: -0.0867 REMARK 3 S21: 0.1342 S22: -0.1648 S23: -0.4573 REMARK 3 S31: 0.0933 S32: 0.4845 S33: 0.1812 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -30.6225 15.4267 28.3296 REMARK 3 T TENSOR REMARK 3 T11: 0.3320 T22: 0.3270 REMARK 3 T33: 0.3091 T12: 0.0548 REMARK 3 T13: -0.0006 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 5.1457 L22: 2.3582 REMARK 3 L33: 4.4688 L12: 0.6703 REMARK 3 L13: 1.0247 L23: -0.3779 REMARK 3 S TENSOR REMARK 3 S11: -0.0050 S12: 0.0983 S13: 0.2080 REMARK 3 S21: 0.0826 S22: -0.0809 S23: 0.2336 REMARK 3 S31: -0.0482 S32: -0.6817 S33: 0.0459 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -37.7071 8.0119 14.9419 REMARK 3 T TENSOR REMARK 3 T11: 0.5010 T22: 0.4477 REMARK 3 T33: 0.3164 T12: -0.0604 REMARK 3 T13: -0.0642 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 7.0131 L22: 4.9289 REMARK 3 L33: 7.9352 L12: 0.5068 REMARK 3 L13: 2.3298 L23: -0.7438 REMARK 3 S TENSOR REMARK 3 S11: 0.1803 S12: 0.0828 S13: -0.4354 REMARK 3 S21: -0.2600 S22: -0.0268 S23: 0.1377 REMARK 3 S31: 0.7816 S32: -0.3835 S33: -0.2126 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -39.3461 17.4454 16.7777 REMARK 3 T TENSOR REMARK 3 T11: 0.4812 T22: 0.5718 REMARK 3 T33: 0.4382 T12: 0.0657 REMARK 3 T13: -0.0978 T23: -0.0442 REMARK 3 L TENSOR REMARK 3 L11: 9.0736 L22: 7.1945 REMARK 3 L33: 9.8782 L12: 1.6780 REMARK 3 L13: 0.2036 L23: -1.5325 REMARK 3 S TENSOR REMARK 3 S11: 0.1360 S12: -0.3112 S13: 0.4131 REMARK 3 S21: 0.1396 S22: -0.1870 S23: 0.7790 REMARK 3 S31: -0.8596 S32: -0.5071 S33: 0.0523 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UP6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1000264419. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12830 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 35.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.57500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.820 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: IN-HOUSE MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE PRODUCED BY SITTING DROP REMARK 280 VAPOR DIFFUSION WITH AN EQUAL VOLUME OF THE PROTEIN, MSK1-C REMARK 280 TERMINAL DOMAIN (PID6598-1, CID101276) AT 4.91 MG/ML IN 25MM REMARK 280 HEPES PH 7.5, 150MM NACL, 5% GLYCEROL, 5MM BME AND A REMARK 280 CRYSTALLIZATION BUFFER CONTAINING 12.5% PEG 1000, 12.5% PEG 3350, REMARK 280 12.5% MPD: 20MM OF EACH SODIUM FORMATE, AMMONIUM ACETATE, REMARK 280 TRISODIUM CITRATE, SODIUM-POTASSIUM TARTRATE, SODIUM OXAMATE: REMARK 280 100 MM MOPS / HEPES-NA PH 7.5 (TRAY ID 298849, WELL G8, MORPHEUS) REMARK 280 . CRYSTALS WERE DIRELY VITRIFIED IN IN LIQUID N2. PUCK ID BOW0-8, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.28000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 96.56000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.42000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 120.70000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.14000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 413 REMARK 465 MET A 414 REMARK 465 LYS A 415 REMARK 465 ASN A 556 REMARK 465 ASP A 557 REMARK 465 SER A 594 REMARK 465 GLY A 595 REMARK 465 ASN A 596 REMARK 465 GLY A 597 REMARK 465 SER A 623 REMARK 465 HIS A 624 REMARK 465 ASP A 625 REMARK 465 ARG A 626 REMARK 465 SER A 627 REMARK 465 LEU A 628 REMARK 465 THR A 629 REMARK 465 CYS A 630 REMARK 465 THR A 631 REMARK 465 GLY A 707 REMARK 465 ALA A 708 REMARK 465 ALA A 709 REMARK 465 VAL A 710 REMARK 465 HIS A 711 REMARK 465 THR A 712 REMARK 465 CYS A 713 REMARK 465 VAL A 714 REMARK 465 LYS A 715 REMARK 465 ALA A 716 REMARK 465 THR A 717 REMARK 465 PHE A 718 REMARK 465 HIS A 719 REMARK 465 ALA A 720 REMARK 465 PHE A 721 REMARK 465 ASN A 722 REMARK 465 LYS A 723 REMARK 465 TYR A 724 REMARK 465 LYS A 725 REMARK 465 ARG A 726 REMARK 465 GLU A 727 REMARK 465 GLY A 728 REMARK 465 PHE A 729 REMARK 465 CYS A 730 REMARK 465 LEU A 731 REMARK 465 GLN A 732 REMARK 465 ASN A 733 REMARK 465 VAL A 734 REMARK 465 ASP A 735 REMARK 465 LYS A 736 REMARK 465 ALA A 737 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 416 CG OD1 OD2 REMARK 470 ARG A 460 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 476 CG CD OE1 OE2 REMARK 470 LYS A 483 CG CD CE NZ REMARK 470 GLN A 491 CG CD OE1 NE2 REMARK 470 LYS A 511 CG CD CE NZ REMARK 470 LYS A 514 CG CD CE NZ REMARK 470 HIS A 515 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 555 CG CD OE1 OE2 REMARK 470 ASN A 558 CG OD1 ND2 REMARK 470 LEU A 559 CG CD1 CD2 REMARK 470 ARG A 570 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 598 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 634 CG1 CG2 REMARK 470 GLU A 635 CG CD OE1 OE2 REMARK 470 MET A 637 CG SD CE REMARK 470 LYS A 638 CG CD CE NZ REMARK 470 LYS A 639 CG CD CE NZ REMARK 470 LYS A 641 CG CD CE NZ REMARK 470 LYS A 642 CG CD CE NZ REMARK 470 ASP A 644 CG OD1 OD2 REMARK 470 GLU A 650 CG CD OE1 OE2 REMARK 470 LYS A 653 CG CD CE NZ REMARK 470 VAL A 669 CG1 CG2 REMARK 470 ASN A 672 CG OD1 ND2 REMARK 470 LYS A 673 CG CD CE NZ REMARK 470 LYS A 676 CG CD CE NZ REMARK 470 TYR A 682 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN A 691 CG CD OE1 NE2 REMARK 470 ASN A 695 CG OD1 ND2 REMARK 470 ASP A 701 CG OD1 OD2 REMARK 470 SER A 705 OG REMARK 470 SER A 706 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 695 O HOH A 1001 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 461 32.54 -99.20 REMARK 500 ASP A 544 41.77 -148.43 REMARK 500 ASP A 565 81.54 57.79 REMARK 500 TYR A 682 33.23 -87.56 REMARK 500 REMARK 500 REMARK: NULL DBREF 7UP6 A 414 737 UNP O75582 KS6A5_HUMAN 414 738 SEQADV 7UP6 GLY A 413 UNP O75582 EXPRESSION TAG SEQADV 7UP6 GLY A 574 UNP O75582 PRO 574 LINKER SEQADV 7UP6 SER A 594 UNP O75582 ASP 575 LINKER SEQADV 7UP6 GLY A 595 UNP O75582 ASN 576 LINKER SEQADV 7UP6 A UNP O75582 GLN 577 DELETION SEQADV 7UP6 A UNP O75582 PRO 578 DELETION SEQADV 7UP6 A UNP O75582 LEU 579 DELETION SEQADV 7UP6 A UNP O75582 LYS 580 DELETION SEQADV 7UP6 A UNP O75582 THR 581 DELETION SEQADV 7UP6 A UNP O75582 PRO 582 DELETION SEQADV 7UP6 A UNP O75582 CYS 583 DELETION SEQADV 7UP6 A UNP O75582 PHE 584 DELETION SEQADV 7UP6 A UNP O75582 THR 585 DELETION SEQADV 7UP6 A UNP O75582 LEU 586 DELETION SEQADV 7UP6 A UNP O75582 HIS 587 DELETION SEQADV 7UP6 A UNP O75582 TYR 588 DELETION SEQADV 7UP6 A UNP O75582 ALA 589 DELETION SEQADV 7UP6 A UNP O75582 ALA 590 DELETION SEQADV 7UP6 A UNP O75582 PRO 591 DELETION SEQADV 7UP6 A UNP O75582 GLU 592 DELETION SEQADV 7UP6 A UNP O75582 LEU 593 DELETION SEQADV 7UP6 A UNP O75582 LEU 594 DELETION SEQADV 7UP6 A UNP O75582 ASN 595 DELETION SEQADV 7UP6 A UNP O75582 GLN 596 DELETION SEQRES 1 A 306 GLY MET LYS ASP SER PRO PHE TYR GLN HIS TYR ASP LEU SEQRES 2 A 306 ASP LEU LYS ASP LYS PRO LEU GLY GLU GLY SER PHE SER SEQRES 3 A 306 ILE CYS ARG LYS CYS VAL HIS LYS LYS SER ASN GLN ALA SEQRES 4 A 306 PHE ALA VAL LYS ILE ILE SER LYS ARG MET GLU ALA ASN SEQRES 5 A 306 THR GLN LYS GLU ILE THR ALA LEU LYS LEU CYS GLU GLY SEQRES 6 A 306 HIS PRO ASN ILE VAL LYS LEU HIS GLU VAL PHE HIS ASP SEQRES 7 A 306 GLN LEU HIS THR PHE LEU VAL MET GLU LEU LEU ASN GLY SEQRES 8 A 306 GLY GLU LEU PHE GLU ARG ILE LYS LYS LYS LYS HIS PHE SEQRES 9 A 306 SER GLU THR GLU ALA SER TYR ILE MET ARG LYS LEU VAL SEQRES 10 A 306 SER ALA VAL SER HIS MET HIS ASP VAL GLY VAL VAL HIS SEQRES 11 A 306 ARG ASP LEU LYS PRO GLU ASN LEU LEU PHE THR ASP GLU SEQRES 12 A 306 ASN ASP ASN LEU GLU ILE LYS ILE ILE ASP PHE GLY PHE SEQRES 13 A 306 ALA ARG LEU LYS PRO GLY SER GLY ASN GLY TYR ASP GLU SEQRES 14 A 306 SER CYS ASP LEU TRP SER LEU GLY VAL ILE LEU TYR THR SEQRES 15 A 306 MET LEU SER GLY GLN VAL PRO PHE GLN SER HIS ASP ARG SEQRES 16 A 306 SER LEU THR CYS THR SER ALA VAL GLU ILE MET LYS LYS SEQRES 17 A 306 ILE LYS LYS GLY ASP PHE SER PHE GLU GLY GLU ALA TRP SEQRES 18 A 306 LYS ASN VAL SER GLN GLU ALA LYS ASP LEU ILE GLN GLY SEQRES 19 A 306 LEU LEU THR VAL ASP PRO ASN LYS ARG LEU LYS MET SER SEQRES 20 A 306 GLY LEU ARG TYR ASN GLU TRP LEU GLN ASP GLY SER GLN SEQRES 21 A 306 LEU SER SER ASN PRO LEU MET THR PRO ASP ILE LEU GLY SEQRES 22 A 306 SER SER GLY ALA ALA VAL HIS THR CYS VAL LYS ALA THR SEQRES 23 A 306 PHE HIS ALA PHE ASN LYS TYR LYS ARG GLU GLY PHE CYS SEQRES 24 A 306 LEU GLN ASN VAL ASP LYS ALA HET SUU A 900 22 HET OXM A 901 6 HET OXM A 902 6 HETNAM SUU (E)-3-(3-(7H-PYRROLO[2,3-D]PYRIMIDIN-4-YL)PHENYL)-2- HETNAM 2 SUU CYANOACRYLAMIDE BOUND FORM HETNAM OXM OXAMIC ACID FORMUL 2 SUU C16 H13 N5 O FORMUL 3 OXM 2(C2 H3 N O3) FORMUL 5 HOH *49(H2 O) HELIX 1 AA1 SER A 417 HIS A 422 1 6 HELIX 2 AA2 MET A 461 GLU A 476 1 16 HELIX 3 AA3 LEU A 506 LYS A 513 1 8 HELIX 4 AA4 SER A 517 VAL A 538 1 22 HELIX 5 AA5 LYS A 546 GLU A 548 5 3 HELIX 6 AA6 ASP A 599 GLY A 617 1 19 HELIX 7 AA7 ALA A 633 LYS A 642 1 10 HELIX 8 AA8 GLY A 649 LYS A 653 5 5 HELIX 9 AA9 SER A 656 THR A 668 1 13 HELIX 10 AB1 ASP A 670 ARG A 674 5 5 HELIX 11 AB2 LYS A 676 TYR A 682 1 7 HELIX 12 AB3 MET A 698 SER A 706 1 9 SHEET 1 AA1 3 TYR A 423 LEU A 425 0 SHEET 2 AA1 3 SER A 438 HIS A 445 -1 O VAL A 444 N ASP A 424 SHEET 3 AA1 3 GLY A 433 GLU A 434 -1 N GLY A 433 O CYS A 440 SHEET 1 AA2 5 TYR A 423 LEU A 425 0 SHEET 2 AA2 5 SER A 438 HIS A 445 -1 O VAL A 444 N ASP A 424 SHEET 3 AA2 5 ALA A 451 SER A 458 -1 O ILE A 456 N ILE A 439 SHEET 4 AA2 5 HIS A 493 MET A 498 -1 O MET A 498 N ALA A 453 SHEET 5 AA2 5 LEU A 484 HIS A 489 -1 N PHE A 488 O PHE A 495 SHEET 1 AA3 3 GLY A 504 GLU A 505 0 SHEET 2 AA3 3 LEU A 550 THR A 553 -1 O PHE A 552 N GLY A 504 SHEET 3 AA3 3 GLU A 560 ILE A 563 -1 O LYS A 562 N LEU A 551 SHEET 1 AA4 2 VAL A 540 VAL A 541 0 SHEET 2 AA4 2 ARG A 570 LEU A 571 -1 O ARG A 570 N VAL A 541 LINK SG CYS A 440 C04 SUU A 900 1555 1555 1.90 CISPEP 1 LYS A 572 PRO A 573 0 0.74 CRYST1 71.170 71.170 144.840 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014051 0.008112 0.000000 0.00000 SCALE2 0.000000 0.016225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006904 0.00000