HEADER LIGASE 18-APR-22 7UQ1 TITLE THE X-RAY CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF STAPHYLOCOCCUS TITLE 2 AUREUS FATTY ACID KINASE A (FAKA, RESIDUES 1-208) IN COMPLEX WITH AMP TITLE 3 AND A SINGLE MG ION AT THE DINUCLEAR BINDING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FATTY ACID KINASE A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FATTY ACID KINASE A, PHOSPHORYLATION, FATTY ACID, N-TERMINUS DOMAIN, KEYWDS 2 LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,C.SUBRAMANIAN,J.SEETHARAMAN,C.O.ROCK,S.W.WHITE REVDAT 3 22-NOV-23 7UQ1 1 JRNL REVDAT 2 18-OCT-23 7UQ1 1 REMARK REVDAT 1 11-MAY-22 7UQ1 0 JRNL AUTH C.SUBRAMANIAN,M.G.CUYPERS,C.D.RADKA,S.W.WHITE,C.O.ROCK JRNL TITL DOMAIN ARCHITECTURE AND CATALYSIS OF THE STAPHYLOCOCCUS JRNL TITL 2 AUREUS FATTY ACID KINASE. JRNL REF J.BIOL.CHEM. V. 298 01993 2022 JRNL REFN ESSN 1083-351X JRNL PMID 35490779 JRNL DOI 10.1016/J.JBC.2022.101993 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 20322 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.740 REMARK 3 FREE R VALUE TEST SET COUNT : 963 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.2500 - 3.2900 0.98 2871 153 0.1556 0.1940 REMARK 3 2 3.2900 - 2.6100 0.99 2770 143 0.1753 0.2166 REMARK 3 3 2.6100 - 2.2800 1.00 2741 156 0.1668 0.2413 REMARK 3 4 2.2800 - 2.0700 1.00 2775 118 0.1707 0.2385 REMARK 3 5 2.0700 - 1.9200 1.00 2742 135 0.1873 0.2423 REMARK 3 6 1.9200 - 1.8100 1.00 2727 123 0.2264 0.2855 REMARK 3 7 1.8100 - 1.7200 1.00 2733 135 0.2756 0.3377 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.087 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1609 REMARK 3 ANGLE : 0.667 2169 REMARK 3 CHIRALITY : 0.041 255 REMARK 3 PLANARITY : 0.004 279 REMARK 3 DIHEDRAL : 8.925 228 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 6 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2061 -2.1834 30.8360 REMARK 3 T TENSOR REMARK 3 T11: 0.4601 T22: 0.8967 REMARK 3 T33: 0.2560 T12: -0.0735 REMARK 3 T13: 0.0172 T23: -0.1021 REMARK 3 L TENSOR REMARK 3 L11: 7.5240 L22: 8.1693 REMARK 3 L33: 4.9983 L12: 2.8642 REMARK 3 L13: 5.9186 L23: 3.7738 REMARK 3 S TENSOR REMARK 3 S11: 0.1642 S12: -0.8274 S13: 0.1734 REMARK 3 S21: 0.7252 S22: 0.0687 S23: -0.3551 REMARK 3 S31: -0.1506 S32: 1.2480 S33: -0.3578 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6149 0.6813 7.3807 REMARK 3 T TENSOR REMARK 3 T11: 0.2457 T22: 0.2057 REMARK 3 T33: 0.2369 T12: 0.0523 REMARK 3 T13: -0.0054 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 1.9967 L22: 0.5476 REMARK 3 L33: 7.6638 L12: 0.8331 REMARK 3 L13: -1.2987 L23: -0.7223 REMARK 3 S TENSOR REMARK 3 S11: 0.0755 S12: 0.0647 S13: 0.3714 REMARK 3 S21: 0.0522 S22: 0.0362 S23: 0.1262 REMARK 3 S31: -0.4090 S32: -0.1165 S33: -0.1045 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6732 -8.8553 17.2804 REMARK 3 T TENSOR REMARK 3 T11: 0.2014 T22: 0.3124 REMARK 3 T33: 0.1936 T12: 0.0406 REMARK 3 T13: 0.0618 T23: -0.0212 REMARK 3 L TENSOR REMARK 3 L11: 2.0641 L22: 2.8144 REMARK 3 L33: 4.3643 L12: -0.0339 REMARK 3 L13: -2.1338 L23: 2.5016 REMARK 3 S TENSOR REMARK 3 S11: 0.1711 S12: -0.3607 S13: -0.2398 REMARK 3 S21: 0.2378 S22: -0.0200 S23: 0.3477 REMARK 3 S31: 0.0012 S32: -0.4328 S33: 0.1250 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7878 -12.0869 10.1749 REMARK 3 T TENSOR REMARK 3 T11: 0.1345 T22: 0.1966 REMARK 3 T33: 0.1520 T12: 0.0165 REMARK 3 T13: 0.0217 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 3.5876 L22: 5.0695 REMARK 3 L33: 5.0853 L12: -1.1829 REMARK 3 L13: 2.9143 L23: -3.3228 REMARK 3 S TENSOR REMARK 3 S11: -0.0549 S12: -0.2378 S13: 0.0553 REMARK 3 S21: 0.1566 S22: -0.0146 S23: -0.0275 REMARK 3 S31: -0.2532 S32: -0.1392 S33: 0.0636 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0508 -13.8465 26.9287 REMARK 3 T TENSOR REMARK 3 T11: 0.5297 T22: 0.4185 REMARK 3 T33: 0.3294 T12: 0.0397 REMARK 3 T13: 0.0372 T23: 0.0780 REMARK 3 L TENSOR REMARK 3 L11: 3.6214 L22: 8.5154 REMARK 3 L33: 5.2928 L12: 2.0917 REMARK 3 L13: -2.9323 L23: 0.0317 REMARK 3 S TENSOR REMARK 3 S11: -0.2194 S12: -1.1979 S13: -1.0706 REMARK 3 S21: 0.9559 S22: -0.0940 S23: -0.3555 REMARK 3 S31: 1.1609 S32: 0.0851 S33: 0.0698 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0513 -14.8563 8.8198 REMARK 3 T TENSOR REMARK 3 T11: 0.1519 T22: 0.2086 REMARK 3 T33: 0.1950 T12: 0.0506 REMARK 3 T13: 0.0035 T23: 0.0264 REMARK 3 L TENSOR REMARK 3 L11: 3.0384 L22: 2.5726 REMARK 3 L33: 6.3976 L12: 1.3082 REMARK 3 L13: 1.4878 L23: 1.3503 REMARK 3 S TENSOR REMARK 3 S11: 0.0553 S12: -0.3080 S13: -0.2234 REMARK 3 S21: 0.1479 S22: -0.0140 S23: -0.0448 REMARK 3 S31: 0.4638 S32: 0.0618 S33: -0.1022 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4666 -9.2872 15.3726 REMARK 3 T TENSOR REMARK 3 T11: 0.2231 T22: 0.3934 REMARK 3 T33: 0.2504 T12: 0.0077 REMARK 3 T13: -0.0073 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 3.5127 L22: 4.3767 REMARK 3 L33: 7.2810 L12: -0.2906 REMARK 3 L13: 2.5674 L23: 1.2239 REMARK 3 S TENSOR REMARK 3 S11: 0.1989 S12: -0.3895 S13: -0.1964 REMARK 3 S21: 0.5017 S22: 0.0638 S23: -0.4520 REMARK 3 S31: 0.7684 S32: 0.8757 S33: -0.2581 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 153 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1259 -2.0953 11.1291 REMARK 3 T TENSOR REMARK 3 T11: 0.2880 T22: 0.3112 REMARK 3 T33: 0.2914 T12: -0.0423 REMARK 3 T13: -0.0130 T23: -0.0538 REMARK 3 L TENSOR REMARK 3 L11: 2.5247 L22: 1.1442 REMARK 3 L33: 5.3796 L12: -0.3791 REMARK 3 L13: -2.2490 L23: 1.1354 REMARK 3 S TENSOR REMARK 3 S11: 0.1888 S12: -0.4043 S13: 0.3835 REMARK 3 S21: 0.1123 S22: 0.0754 S23: -0.0984 REMARK 3 S31: -0.3395 S32: 0.6177 S33: -0.3168 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8117 -1.6353 -7.2583 REMARK 3 T TENSOR REMARK 3 T11: 0.3323 T22: 0.3348 REMARK 3 T33: 0.2650 T12: 0.0318 REMARK 3 T13: 0.0112 T23: 0.0582 REMARK 3 L TENSOR REMARK 3 L11: 6.4271 L22: 2.9640 REMARK 3 L33: 6.9550 L12: -2.0831 REMARK 3 L13: -0.1185 L23: -3.6722 REMARK 3 S TENSOR REMARK 3 S11: 0.4423 S12: 0.6466 S13: 0.4640 REMARK 3 S21: -0.1115 S22: -0.4183 S23: 0.0034 REMARK 3 S31: -0.5399 S32: 0.1484 S33: 0.0575 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0293 2.5066 14.4290 REMARK 3 T TENSOR REMARK 3 T11: 0.3450 T22: 0.2807 REMARK 3 T33: 0.2516 T12: -0.0505 REMARK 3 T13: 0.0550 T23: -0.1069 REMARK 3 L TENSOR REMARK 3 L11: 2.4004 L22: 1.0536 REMARK 3 L33: 6.7197 L12: 0.3656 REMARK 3 L13: -0.2355 L23: 2.1896 REMARK 3 S TENSOR REMARK 3 S11: 0.4549 S12: -0.5160 S13: 1.0158 REMARK 3 S21: 0.0929 S22: 0.0238 S23: 0.0139 REMARK 3 S31: -1.4642 S32: 0.1879 S33: 0.5440 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UQ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000264577. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20367 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 29.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7SNB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MGCL2, 0.1M TRIS HCL PH8.5, REMARK 280 30%PEG4000, (JCSG CORE IV #21), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.92150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.91200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.14450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.91200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.92150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.14450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLU A 208 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A -1 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A -1 -73.63 -174.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 304 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A -1 O REMARK 620 2 ASP A 40 OD2 102.0 REMARK 620 3 HOH A 413 O 105.8 4.0 REMARK 620 4 HOH A 418 O 103.3 2.8 2.8 REMARK 620 5 HOH A 434 O 103.2 1.6 3.4 3.5 REMARK 620 6 HOH A 513 O 104.9 4.1 4.2 5.6 2.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 32 OD1 REMARK 620 2 ASP A 38 OD1 82.8 REMARK 620 3 ASP A 40 OD1 89.8 86.1 REMARK 620 4 AMP A 301 O2P 90.5 173.1 95.1 REMARK 620 5 HOH A 448 O 93.6 86.8 171.7 92.4 REMARK 620 6 HOH A 458 O 175.8 93.0 90.1 93.7 86.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 305 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 203 O REMARK 620 2 HOH A 498 O 87.0 REMARK 620 3 HOH A 511 O 96.9 172.5 REMARK 620 4 HOH A 532 O 102.7 94.3 91.1 REMARK 620 5 HOH A 571 O 158.9 76.1 98.6 91.3 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7SNB RELATED DB: PDB DBREF 7UQ1 A 1 208 UNP Q7A5Z4 Y1069_STAAN 1 208 SEQADV 7UQ1 MET A -19 UNP Q7A5Z4 INITIATING METHIONINE SEQADV 7UQ1 GLY A -18 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 SER A -17 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 SER A -16 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 HIS A -15 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 HIS A -14 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 HIS A -13 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 HIS A -12 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 HIS A -11 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 HIS A -10 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 SER A -9 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 SER A -8 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 GLY A -7 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 LEU A -6 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 VAL A -5 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 PRO A -4 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 ARG A -3 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 GLY A -2 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 SER A -1 UNP Q7A5Z4 EXPRESSION TAG SEQADV 7UQ1 HIS A 0 UNP Q7A5Z4 EXPRESSION TAG SEQRES 1 A 228 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 228 LEU VAL PRO ARG GLY SER HIS MET ILE SER LYS ILE ASN SEQRES 3 A 228 GLY LYS LEU PHE ALA ASP MET ILE ILE GLN GLY ALA GLN SEQRES 4 A 228 ASN LEU SER ASN ASN ALA ASP LEU VAL ASP SER LEU ASN SEQRES 5 A 228 VAL TYR PRO VAL PRO ASP GLY ASP THR GLY THR ASN MET SEQRES 6 A 228 ASN LEU THR MET THR SER GLY ARG GLU GLU VAL GLU ASN SEQRES 7 A 228 ASN LEU SER LYS ASN ILE GLY GLU LEU GLY LYS THR PHE SEQRES 8 A 228 SER LYS GLY LEU LEU MET GLY ALA ARG GLY ASN SER GLY SEQRES 9 A 228 VAL ILE LEU SER GLN LEU PHE ARG GLY PHE CYS LYS ASN SEQRES 10 A 228 ILE GLU SER GLU SER GLU ILE ASN SER LYS LEU LEU ALA SEQRES 11 A 228 GLU SER PHE GLN ALA GLY VAL GLU THR ALA TYR LYS ALA SEQRES 12 A 228 VAL MET LYS PRO VAL GLU GLY THR ILE LEU THR VAL ALA SEQRES 13 A 228 LYS ASP ALA ALA GLN ALA ALA ILE GLU LYS ALA ASN ASN SEQRES 14 A 228 THR GLU ASP CYS ILE GLU LEU MET GLU TYR ILE ILE VAL SEQRES 15 A 228 LYS ALA ASN GLU SER LEU GLU ASN THR PRO ASN LEU LEU SEQRES 16 A 228 ALA VAL LEU LYS GLU VAL GLY VAL VAL ASP SER GLY GLY SEQRES 17 A 228 LYS GLY LEU LEU CYS VAL TYR GLU GLY PHE LEU LYS ALA SEQRES 18 A 228 LEU LYS GLY GLU LYS VAL GLU HET AMP A 301 23 HET GOL A 302 6 HET MG A 303 1 HET MG A 304 1 HET MG A 305 1 HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 AMP C10 H14 N5 O7 P FORMUL 3 GOL C3 H8 O3 FORMUL 4 MG 3(MG 2+) FORMUL 7 HOH *193(H2 O) HELIX 1 AA1 ASN A 6 ASN A 24 1 19 HELIX 2 AA2 ASN A 24 ASN A 32 1 9 HELIX 3 AA3 ASP A 40 ASN A 59 1 20 HELIX 4 AA4 ASN A 63 MET A 77 1 15 HELIX 5 AA5 ARG A 80 ILE A 98 1 19 HELIX 6 AA6 ASN A 105 VAL A 124 1 20 HELIX 7 AA7 THR A 131 ASN A 148 1 18 HELIX 8 AA8 ASP A 152 THR A 171 1 20 HELIX 9 AA9 PRO A 172 LEU A 174 5 3 HELIX 10 AB1 LEU A 175 GLY A 182 1 8 HELIX 11 AB2 ASP A 185 LYS A 203 1 19 LINK O SER A -1 MG MG A 304 1555 2455 2.34 LINK OD1 ASN A 32 MG MG A 303 1555 1555 1.99 LINK OD1 ASP A 38 MG MG A 303 1555 1555 2.15 LINK OD1 ASP A 40 MG MG A 303 1555 1555 1.95 LINK OD2 ASP A 40 MG MG A 304 1555 1555 2.03 LINK O LYS A 203 MG MG A 305 1555 1555 2.12 LINK O2P AMP A 301 MG MG A 303 1555 1555 2.08 LINK MG MG A 303 O HOH A 448 1555 1555 2.06 LINK MG MG A 303 O HOH A 458 1555 1555 2.02 LINK MG MG A 304 O HOH A 413 1555 1555 2.21 LINK MG MG A 304 O HOH A 418 1555 2454 1.98 LINK MG MG A 304 O HOH A 434 1555 1555 2.14 LINK MG MG A 304 O HOH A 513 1555 1555 2.71 LINK MG MG A 305 O HOH A 498 1555 1555 2.18 LINK MG MG A 305 O HOH A 511 1555 1555 2.09 LINK MG MG A 305 O HOH A 532 1555 3555 2.72 LINK MG MG A 305 O HOH A 571 1555 3555 2.42 CISPEP 1 TYR A 34 PRO A 35 0 -3.21 CRYST1 41.843 54.289 81.824 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023899 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012221 0.00000