HEADER VIRAL PROTEIN 18-APR-22 7UQ2 TITLE VS.4 FROM T4 PHAGE IN COMPLEX WITH CGAMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: VS.4; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TEQUATROVIRUS; SOURCE 3 ORGANISM_TAXID: 10663; SOURCE 4 GENE: Y06G, 62.5, VS.4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BINDS 3', 3'-CGAMP, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.JENSON,Z.J.CHEN REVDAT 4 03-APR-24 7UQ2 1 REMARK REVDAT 3 26-APR-23 7UQ2 1 JRNL REVDAT 2 15-MAR-23 7UQ2 1 JRNL REVDAT 1 08-FEB-23 7UQ2 0 JRNL AUTH J.M.JENSON,T.LI,F.DU,C.K.EA,Z.J.CHEN JRNL TITL UBIQUITIN-LIKE CONJUGATION BY BACTERIAL CGAS ENHANCES JRNL TITL 2 ANTI-PHAGE DEFENCE. JRNL REF NATURE V. 616 326 2023 JRNL REFN ESSN 1476-4687 JRNL PMID 36848932 JRNL DOI 10.1038/S41586-023-05862-7 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.JUMPER,R.EVANS,A.PRITZEL,T.GREEN,M.FIGURNOV,O.RONNEBERGER, REMARK 1 AUTH 2 K.TUNYASUVUNAKOOL,R.BATES,A.ZIDEK,A.POTAPENKO,A.BRIDGLAND, REMARK 1 AUTH 3 C.MEYER,S.A.A.KOHL,A.J.BALLARD,A.COWIE,B.ROMERA-PAREDES, REMARK 1 AUTH 4 S.NIKOLOV,R.JAIN,J.ADLER,T.BACK,S.PETERSEN,D.REIMAN, REMARK 1 AUTH 5 E.CLANCY,M.ZIELINSKI,M.STEINEGGER,M.PACHOLSKA,T.BERGHAMMER, REMARK 1 AUTH 6 S.BODENSTEIN,D.SILVER,O.VINYALS,A.W.SENIOR,K.KAVUKCUOGLU, REMARK 1 AUTH 7 P.KOHLI,D.HASSABIS REMARK 1 TITL HIGHLY ACCURATE PROTEIN STRUCTURE PREDICTION WITH ALPHAFOLD. REMARK 1 REF NATURE V. 596 583 2021 REMARK 1 REFN ESSN 1476-4687 REMARK 1 PMID 34265844 REMARK 1 DOI 10.1073/PNAS.2021785118 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 48375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1943 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.8500 - 4.8200 0.98 3709 155 0.1994 0.2266 REMARK 3 2 4.8200 - 3.8200 0.99 3568 149 0.1468 0.1393 REMARK 3 3 3.8200 - 3.3400 0.99 3494 146 0.1672 0.1985 REMARK 3 4 3.3400 - 3.0400 0.99 3425 143 0.1771 0.2009 REMARK 3 5 3.0400 - 2.8200 0.98 3400 141 0.1801 0.1970 REMARK 3 6 2.8200 - 2.6500 0.98 3393 139 0.1895 0.2295 REMARK 3 7 2.6500 - 2.5200 0.95 3277 139 0.1911 0.2305 REMARK 3 8 2.5200 - 2.4100 0.96 3283 137 0.1912 0.2036 REMARK 3 9 2.4100 - 2.3200 0.95 3292 139 0.1818 0.2251 REMARK 3 10 2.3200 - 2.2400 0.95 3247 136 0.1848 0.2379 REMARK 3 11 2.2400 - 2.1700 0.93 3207 134 0.1925 0.2143 REMARK 3 12 2.1700 - 2.1100 0.91 3113 129 0.2057 0.2280 REMARK 3 13 2.1100 - 2.0500 0.91 3097 133 0.2148 0.2406 REMARK 3 14 2.0500 - 2.0000 0.86 2927 123 0.2492 0.3174 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.183 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.791 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 4481 REMARK 3 ANGLE : 1.229 6072 REMARK 3 CHIRALITY : 0.094 645 REMARK 3 PLANARITY : 0.005 757 REMARK 3 DIHEDRAL : 22.600 1656 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UQ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-22. REMARK 100 THE DEPOSITION ID IS D_1000264607. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0448 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49941 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.170 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ALPHAFOLD MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7% PEG8000, 0.1 M IMIDAZOLE, PH 6.3, REMARK 280 0.2 MM CALCIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.80800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 40.84700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 40.84700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 54.40400 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 40.84700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 40.84700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 163.21200 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 40.84700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.84700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 54.40400 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 40.84700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.84700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 163.21200 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 108.80800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -113.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 SER D 0 REMARK 465 GLU D 48 REMARK 465 ASP D 49 REMARK 465 SER E 0 REMARK 465 GLU E 48 REMARK 465 ASP E 49 REMARK 465 SER F 0 REMARK 465 MET F 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 GLU B 3 CG CD OE1 OE2 REMARK 470 MET D 1 CG SD CE REMARK 470 GLU D 51 CG CD OE1 OE2 REMARK 470 GLU F 3 CG CD OE1 OE2 REMARK 470 GLU F 13 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 48 -101.75 56.76 REMARK 500 GLN A 83 63.84 62.78 REMARK 500 GLU B 48 -102.37 59.37 REMARK 500 CYS C 47 92.77 -162.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 319 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A 320 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH B 310 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH C 301 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH D 200 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH D 201 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH F 187 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH F 188 DISTANCE = 6.90 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 45 O REMARK 620 2 ASP A 45 OD1 76.5 REMARK 620 3 GLU A 48 OE2 86.7 158.2 REMARK 620 4 HOH A 280 O 92.8 79.3 87.9 REMARK 620 5 GLU B 13 OE1 26.2 72.4 98.3 116.5 REMARK 620 6 GLU B 13 OE2 29.0 68.7 102.6 117.1 4.3 REMARK 620 7 ASP B 45 OD1 47.8 30.6 128.7 74.7 52.7 50.4 REMARK 620 8 ASP B 45 OD2 47.6 30.1 129.6 76.6 51.5 49.1 1.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 103 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 45 OD1 REMARK 620 2 ASP A 45 OD2 47.2 REMARK 620 3 GLU B 13 OE2 67.4 40.2 REMARK 620 4 ASP B 45 O 61.0 20.5 54.7 REMARK 620 5 ASP B 45 OD1 59.7 17.8 51.9 2.9 REMARK 620 6 HOH B 276 O 87.3 88.9 127.8 73.1 75.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 104 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 48 OE1 REMARK 620 2 GLU A 48 OE2 43.4 REMARK 620 3 HOH A 209 O 49.4 65.8 REMARK 620 4 HOH A 278 O 69.5 82.9 116.5 REMARK 620 5 GLU B 42 OE1 69.0 26.9 88.6 84.1 REMARK 620 6 GLU B 42 OE2 70.5 28.4 89.6 84.8 1.6 REMARK 620 7 ASP B 45 OD2 67.3 25.7 88.4 82.3 2.1 3.5 REMARK 620 8 HOH B 240 O 93.0 78.4 50.3 160.6 81.6 81.3 83.1 REMARK 620 9 HOH B 273 O 75.6 118.7 70.8 79.9 144.3 145.9 142.5 104.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 39 OE2 REMARK 620 2 GLU E 14 OE2 75.9 REMARK 620 3 HOH E 138 O 80.3 76.6 REMARK 620 4 HOH E 171 O 150.5 78.7 108.1 REMARK 620 N 1 2 3 DBREF 7UQ2 A 1 88 UNP P13314 Y06G_BPT4 1 88 DBREF 7UQ2 B 1 88 UNP P13314 Y06G_BPT4 1 88 DBREF 7UQ2 C 1 88 UNP P13314 Y06G_BPT4 1 88 DBREF 7UQ2 D 1 88 UNP P13314 Y06G_BPT4 1 88 DBREF 7UQ2 E 1 88 UNP P13314 Y06G_BPT4 1 88 DBREF 7UQ2 F 1 88 UNP P13314 Y06G_BPT4 1 88 SEQADV 7UQ2 SER A 0 UNP P13314 EXPRESSION TAG SEQADV 7UQ2 SER B 0 UNP P13314 EXPRESSION TAG SEQADV 7UQ2 SER C 0 UNP P13314 EXPRESSION TAG SEQADV 7UQ2 SER D 0 UNP P13314 EXPRESSION TAG SEQADV 7UQ2 SER E 0 UNP P13314 EXPRESSION TAG SEQADV 7UQ2 SER F 0 UNP P13314 EXPRESSION TAG SEQRES 1 A 89 SER MET ILE GLU ASP ILE LYS GLY TYR LYS PRO HIS THR SEQRES 2 A 89 GLU GLU LYS ILE GLY LYS VAL ASN ALA ILE LYS ASP ALA SEQRES 3 A 89 GLU VAL ARG LEU GLY LEU ILE PHE ASP ALA LEU TYR ASP SEQRES 4 A 89 GLU PHE TRP GLU ALA LEU ASP ASN CYS GLU ASP CYS GLU SEQRES 5 A 89 PHE ALA LYS ASN TYR ALA GLU SER LEU ASP GLN LEU THR SEQRES 6 A 89 ILE ALA LYS THR LYS LEU LYS GLU ALA SER MET TRP ALA SEQRES 7 A 89 CYS ARG ALA VAL PHE GLN PRO GLU GLU LYS TYR SEQRES 1 B 89 SER MET ILE GLU ASP ILE LYS GLY TYR LYS PRO HIS THR SEQRES 2 B 89 GLU GLU LYS ILE GLY LYS VAL ASN ALA ILE LYS ASP ALA SEQRES 3 B 89 GLU VAL ARG LEU GLY LEU ILE PHE ASP ALA LEU TYR ASP SEQRES 4 B 89 GLU PHE TRP GLU ALA LEU ASP ASN CYS GLU ASP CYS GLU SEQRES 5 B 89 PHE ALA LYS ASN TYR ALA GLU SER LEU ASP GLN LEU THR SEQRES 6 B 89 ILE ALA LYS THR LYS LEU LYS GLU ALA SER MET TRP ALA SEQRES 7 B 89 CYS ARG ALA VAL PHE GLN PRO GLU GLU LYS TYR SEQRES 1 C 89 SER MET ILE GLU ASP ILE LYS GLY TYR LYS PRO HIS THR SEQRES 2 C 89 GLU GLU LYS ILE GLY LYS VAL ASN ALA ILE LYS ASP ALA SEQRES 3 C 89 GLU VAL ARG LEU GLY LEU ILE PHE ASP ALA LEU TYR ASP SEQRES 4 C 89 GLU PHE TRP GLU ALA LEU ASP ASN CYS GLU ASP CYS GLU SEQRES 5 C 89 PHE ALA LYS ASN TYR ALA GLU SER LEU ASP GLN LEU THR SEQRES 6 C 89 ILE ALA LYS THR LYS LEU LYS GLU ALA SER MET TRP ALA SEQRES 7 C 89 CYS ARG ALA VAL PHE GLN PRO GLU GLU LYS TYR SEQRES 1 D 89 SER MET ILE GLU ASP ILE LYS GLY TYR LYS PRO HIS THR SEQRES 2 D 89 GLU GLU LYS ILE GLY LYS VAL ASN ALA ILE LYS ASP ALA SEQRES 3 D 89 GLU VAL ARG LEU GLY LEU ILE PHE ASP ALA LEU TYR ASP SEQRES 4 D 89 GLU PHE TRP GLU ALA LEU ASP ASN CYS GLU ASP CYS GLU SEQRES 5 D 89 PHE ALA LYS ASN TYR ALA GLU SER LEU ASP GLN LEU THR SEQRES 6 D 89 ILE ALA LYS THR LYS LEU LYS GLU ALA SER MET TRP ALA SEQRES 7 D 89 CYS ARG ALA VAL PHE GLN PRO GLU GLU LYS TYR SEQRES 1 E 89 SER MET ILE GLU ASP ILE LYS GLY TYR LYS PRO HIS THR SEQRES 2 E 89 GLU GLU LYS ILE GLY LYS VAL ASN ALA ILE LYS ASP ALA SEQRES 3 E 89 GLU VAL ARG LEU GLY LEU ILE PHE ASP ALA LEU TYR ASP SEQRES 4 E 89 GLU PHE TRP GLU ALA LEU ASP ASN CYS GLU ASP CYS GLU SEQRES 5 E 89 PHE ALA LYS ASN TYR ALA GLU SER LEU ASP GLN LEU THR SEQRES 6 E 89 ILE ALA LYS THR LYS LEU LYS GLU ALA SER MET TRP ALA SEQRES 7 E 89 CYS ARG ALA VAL PHE GLN PRO GLU GLU LYS TYR SEQRES 1 F 89 SER MET ILE GLU ASP ILE LYS GLY TYR LYS PRO HIS THR SEQRES 2 F 89 GLU GLU LYS ILE GLY LYS VAL ASN ALA ILE LYS ASP ALA SEQRES 3 F 89 GLU VAL ARG LEU GLY LEU ILE PHE ASP ALA LEU TYR ASP SEQRES 4 F 89 GLU PHE TRP GLU ALA LEU ASP ASN CYS GLU ASP CYS GLU SEQRES 5 F 89 PHE ALA LYS ASN TYR ALA GLU SER LEU ASP GLN LEU THR SEQRES 6 F 89 ILE ALA LYS THR LYS LEU LYS GLU ALA SER MET TRP ALA SEQRES 7 F 89 CYS ARG ALA VAL PHE GLN PRO GLU GLU LYS TYR HET 4BW A 101 67 HET CA A 102 1 HET CA A 103 1 HET CA A 104 1 HET 4BW B 101 67 HET 4BW C 101 67 HET CA C 102 1 HETNAM 4BW 2-AMINO-9-[(2R,3R,3AS,5R,7AR,9R,10R,10AS,12R,14AR)-9- HETNAM 2 4BW (6-AMINO-9H-PURIN-9-YL)-3,5,10,12-TETRAHYDROXY-5,12- HETNAM 3 4BW DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9, HETNAM 4 4BW 2,8]TETRAOXADIPHOSPHACYCLODODECIN-2-YL]-1,9-DIHYDRO- HETNAM 5 4BW 6H-PURIN-6-ONE HETNAM CA CALCIUM ION HETSYN 4BW 3',3' CGAMP; C-GMP-AMP; C[G(3',5')PA(3',5')P] FORMUL 7 4BW 3(C20 H24 N10 O13 P2) FORMUL 8 CA 4(CA 2+) FORMUL 14 HOH *608(H2 O) HELIX 1 AA1 MET A 1 ILE A 5 5 5 HELIX 2 AA2 THR A 12 GLU A 48 1 37 HELIX 3 AA3 PHE A 52 GLN A 83 1 32 HELIX 4 AA4 THR B 12 GLU B 48 1 37 HELIX 5 AA5 PHE B 52 GLN B 83 1 32 HELIX 6 AA6 THR C 12 CYS C 47 1 36 HELIX 7 AA7 PHE C 52 GLN C 83 1 32 HELIX 8 AA8 THR D 12 ASN D 46 1 35 HELIX 9 AA9 PHE D 52 GLN D 83 1 32 HELIX 10 AB1 MET E 1 ILE E 5 5 5 HELIX 11 AB2 THR E 12 ASN E 46 1 35 HELIX 12 AB3 PHE E 52 GLN E 83 1 32 HELIX 13 AB4 THR F 12 CYS F 47 1 36 HELIX 14 AB5 PHE F 52 GLN F 83 1 32 SSBOND 1 CYS A 47 CYS A 50 1555 1555 2.06 SSBOND 2 CYS B 47 CYS B 50 1555 1555 2.02 SSBOND 3 CYS C 47 CYS C 50 1555 1555 2.03 SSBOND 4 CYS D 47 CYS D 50 1555 1555 2.05 SSBOND 5 CYS E 47 CYS E 50 1555 1555 2.05 SSBOND 6 CYS F 47 CYS F 50 1555 1555 2.06 LINK O ASP A 45 CA CA A 102 1555 1555 2.34 LINK OD1 ASP A 45 CA CA A 102 1555 1555 2.54 LINK OD1 ASP A 45 CA CA A 103 1555 1555 2.76 LINK OD2 ASP A 45 CA CA A 103 1555 1555 2.51 LINK OE2 GLU A 48 CA CA A 102 1555 1555 2.56 LINK OE1 GLU A 48 CA CA A 104 1555 1555 3.19 LINK OE2 GLU A 48 CA CA A 104 1555 1555 2.46 LINK CA CA A 102 O HOH A 280 1555 1555 2.41 LINK CA CA A 102 OE1 GLU B 13 7556 1555 2.45 LINK CA CA A 102 OE2 GLU B 13 7556 1555 2.80 LINK CA CA A 102 OD1 ASP B 45 4554 1555 2.68 LINK CA CA A 102 OD2 ASP B 45 4554 1555 2.63 LINK CA CA A 103 OE2 GLU B 13 7556 1555 2.36 LINK CA CA A 103 O ASP B 45 4554 1555 2.51 LINK CA CA A 103 OD1 ASP B 45 4554 1555 2.57 LINK CA CA A 103 O HOH B 276 1555 3545 2.50 LINK CA CA A 104 O HOH A 209 1555 1555 2.89 LINK CA CA A 104 O HOH A 278 1555 1555 2.26 LINK CA CA A 104 OE1 GLU B 42 4554 1555 2.59 LINK CA CA A 104 OE2 GLU B 42 4554 1555 2.95 LINK CA CA A 104 OD2 ASP B 45 4554 1555 2.54 LINK CA CA A 104 O HOH B 240 1555 7556 2.44 LINK CA CA A 104 O HOH B 273 1555 3545 2.67 LINK OE2 GLU C 39 CA CA C 102 1555 1555 2.95 LINK CA CA C 102 OE2 GLU E 14 1555 1555 2.64 LINK CA CA C 102 O HOH E 138 1555 1555 2.72 LINK CA CA C 102 O HOH E 171 1555 1555 3.02 CRYST1 81.694 81.694 217.616 90.00 90.00 90.00 P 41 21 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012241 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012241 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004595 0.00000