HEADER VIRUS LIKE PARTICLE 22-APR-22 7URN TITLE STRUCTURE OF HIV-1 CAPSID DECLINATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIV-1 CAPSID PROTEIN; COMPND 3 CHAIN: A, L, M, N, O, P, Q; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 STRAIN: NL4-3; SOURCE 5 GENE: GAG-POL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HIV-1, CAPSID, DECLINATION, PENTAMER, HEXAMER, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR O.PORNILLOS,B.K.GANSER-PORNILLOS,R.T.SCHIRRA REVDAT 3 29-MAR-23 7URN 1 JRNL REVDAT 2 22-FEB-23 7URN 1 JRNL REVDAT 1 15-FEB-23 7URN 0 JRNL AUTH R.T.SCHIRRA,N.F.B.DOS SANTOS,K.K.ZADROZNY,I.KUCHARSKA, JRNL AUTH 2 B.K.GANSER-PORNILLOS,O.PORNILLOS JRNL TITL A MOLECULAR SWITCH MODULATES ASSEMBLY AND HOST FACTOR JRNL TITL 2 BINDING OF THE HIV-1 CAPSID. JRNL REF NAT.STRUCT.MOL.BIOL. V. 30 383 2023 JRNL REFN ESSN 1545-9985 JRNL PMID 36759579 JRNL DOI 10.1038/S41594-022-00913-5 REMARK 2 REMARK 2 RESOLUTION. 3.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX, CRYOSPARC, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 4XFX REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : OTHER REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : THE FOLLOWING PROTEIN CHAINS WERE REFINED REMARK 3 SEPARATELY IN REAL SPACE USING PHENIX: A (PENTAMER); L, M AND N REMARK 3 (HALF-HEXAMER). CHAIN M WAS THEN RIGID-BODY FIT TO GENERATE REMARK 3 CHAINS O, P AND Q TO COMPLETE THE HEXAMER. CHAINS O, P AND Q ARE REMARK 3 DEPOSITED AS POLYALA MODELS. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.430 REMARK 3 NUMBER OF PARTICLES : 525219 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7URN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-APR-22. REMARK 100 THE DEPOSITION ID IS D_1000264746. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CAPSID-LIKE PARTICLES OF IN REMARK 245 VITRO ASSEMBLED HIV-1 CA PROTEIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : MANUAL PLUNGE-FREEZING REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 6.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 35-MERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, M, N, O, P, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.951057 0.000000 273.10403 REMARK 350 BIOMT2 2 0.951057 0.309017 0.000000 -43.25543 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.809017 -0.587785 0.000000 398.63617 REMARK 350 BIOMT2 3 0.587785 -0.809017 0.000000 203.11527 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.809017 0.587785 0.000000 203.11527 REMARK 350 BIOMT2 4 -0.587785 -0.809017 0.000000 398.63617 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.309017 0.951057 0.000000 -43.25543 REMARK 350 BIOMT2 5 -0.951057 0.309017 0.000000 273.10403 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 222 REMARK 465 GLY A 223 REMARK 465 PRO A 224 REMARK 465 GLY A 225 REMARK 465 HIS A 226 REMARK 465 LYS A 227 REMARK 465 ALA A 228 REMARK 465 ARG A 229 REMARK 465 VAL A 230 REMARK 465 LEU A 231 REMARK 465 GLY L 222 REMARK 465 GLY L 223 REMARK 465 PRO L 224 REMARK 465 GLY L 225 REMARK 465 HIS L 226 REMARK 465 LYS L 227 REMARK 465 ALA L 228 REMARK 465 ARG L 229 REMARK 465 VAL L 230 REMARK 465 LEU L 231 REMARK 465 GLY M 222 REMARK 465 GLY M 223 REMARK 465 PRO M 224 REMARK 465 GLY M 225 REMARK 465 HIS M 226 REMARK 465 LYS M 227 REMARK 465 ALA M 228 REMARK 465 ARG M 229 REMARK 465 VAL M 230 REMARK 465 LEU M 231 REMARK 465 GLY N 222 REMARK 465 GLY N 223 REMARK 465 PRO N 224 REMARK 465 GLY N 225 REMARK 465 HIS N 226 REMARK 465 LYS N 227 REMARK 465 ALA N 228 REMARK 465 ARG N 229 REMARK 465 VAL N 230 REMARK 465 LEU N 231 REMARK 465 GLY O 222 REMARK 465 GLY O 223 REMARK 465 PRO O 224 REMARK 465 GLY O 225 REMARK 465 HIS O 226 REMARK 465 LYS O 227 REMARK 465 ALA O 228 REMARK 465 ARG O 229 REMARK 465 VAL O 230 REMARK 465 LEU O 231 REMARK 465 GLY P 222 REMARK 465 GLY P 223 REMARK 465 PRO P 224 REMARK 465 GLY P 225 REMARK 465 HIS P 226 REMARK 465 LYS P 227 REMARK 465 ALA P 228 REMARK 465 ARG P 229 REMARK 465 VAL P 230 REMARK 465 LEU P 231 REMARK 465 GLY Q 222 REMARK 465 GLY Q 223 REMARK 465 PRO Q 224 REMARK 465 GLY Q 225 REMARK 465 HIS Q 226 REMARK 465 LYS Q 227 REMARK 465 ALA Q 228 REMARK 465 ARG Q 229 REMARK 465 VAL Q 230 REMARK 465 LEU Q 231 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO O 1 CG CD REMARK 470 ILE O 2 CG1 CG2 CD1 REMARK 470 VAL O 3 CG1 CG2 REMARK 470 GLN O 4 CG CD OE1 NE2 REMARK 470 ASN O 5 CG OD1 ND2 REMARK 470 LEU O 6 CG CD1 CD2 REMARK 470 GLN O 7 CG CD OE1 NE2 REMARK 470 GLN O 9 CG CD OE1 NE2 REMARK 470 MET O 10 CG SD CE REMARK 470 VAL O 11 CG1 CG2 REMARK 470 HIS O 12 CG ND1 CD2 CE1 NE2 REMARK 470 GLN O 13 CG CD OE1 NE2 REMARK 470 ILE O 15 CG1 CG2 CD1 REMARK 470 SER O 16 OG REMARK 470 PRO O 17 CG CD REMARK 470 ARG O 18 CG CD NE CZ NH1 NH2 REMARK 470 THR O 19 OG1 CG2 REMARK 470 LEU O 20 CG CD1 CD2 REMARK 470 ASN O 21 CG OD1 ND2 REMARK 470 TRP O 23 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP O 23 CZ3 CH2 REMARK 470 VAL O 24 CG1 CG2 REMARK 470 LYS O 25 CG CD CE NZ REMARK 470 VAL O 26 CG1 CG2 REMARK 470 VAL O 27 CG1 CG2 REMARK 470 GLU O 28 CG CD OE1 OE2 REMARK 470 GLU O 29 CG CD OE1 OE2 REMARK 470 LYS O 30 CG CD CE NZ REMARK 470 PHE O 32 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER O 33 OG REMARK 470 PRO O 34 CG CD REMARK 470 GLU O 35 CG CD OE1 OE2 REMARK 470 VAL O 36 CG1 CG2 REMARK 470 ILE O 37 CG1 CG2 CD1 REMARK 470 PRO O 38 CG CD REMARK 470 MET O 39 CG SD CE REMARK 470 PHE O 40 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER O 41 OG REMARK 470 LEU O 43 CG CD1 CD2 REMARK 470 SER O 44 OG REMARK 470 GLU O 45 CG CD OE1 OE2 REMARK 470 THR O 48 OG1 CG2 REMARK 470 PRO O 49 CG CD REMARK 470 GLN O 50 CG CD OE1 NE2 REMARK 470 ASP O 51 CG OD1 OD2 REMARK 470 LEU O 52 CG CD1 CD2 REMARK 470 ASN O 53 CG OD1 ND2 REMARK 470 THR O 54 OG1 CG2 REMARK 470 MET O 55 CG SD CE REMARK 470 LEU O 56 CG CD1 CD2 REMARK 470 ASN O 57 CG OD1 ND2 REMARK 470 THR O 58 OG1 CG2 REMARK 470 VAL O 59 CG1 CG2 REMARK 470 HIS O 62 CG ND1 CD2 CE1 NE2 REMARK 470 GLN O 63 CG CD OE1 NE2 REMARK 470 MET O 66 CG SD CE REMARK 470 GLN O 67 CG CD OE1 NE2 REMARK 470 MET O 68 CG SD CE REMARK 470 LEU O 69 CG CD1 CD2 REMARK 470 LYS O 70 CG CD CE NZ REMARK 470 GLU O 71 CG CD OE1 OE2 REMARK 470 THR O 72 OG1 CG2 REMARK 470 ILE O 73 CG1 CG2 CD1 REMARK 470 ASN O 74 CG OD1 ND2 REMARK 470 GLU O 75 CG CD OE1 OE2 REMARK 470 GLU O 76 CG CD OE1 OE2 REMARK 470 GLU O 79 CG CD OE1 OE2 REMARK 470 TRP O 80 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP O 80 CZ3 CH2 REMARK 470 ASP O 81 CG OD1 OD2 REMARK 470 ARG O 82 CG CD NE CZ NH1 NH2 REMARK 470 LEU O 83 CG CD1 CD2 REMARK 470 HIS O 84 CG ND1 CD2 CE1 NE2 REMARK 470 PRO O 85 CG CD REMARK 470 VAL O 86 CG1 CG2 REMARK 470 HIS O 87 CG ND1 CD2 CE1 NE2 REMARK 470 PRO O 90 CG CD REMARK 470 ILE O 91 CG1 CG2 CD1 REMARK 470 PRO O 93 CG CD REMARK 470 GLN O 95 CG CD OE1 NE2 REMARK 470 MET O 96 CG SD CE REMARK 470 ARG O 97 CG CD NE CZ NH1 NH2 REMARK 470 GLU O 98 CG CD OE1 OE2 REMARK 470 PRO O 99 CG CD REMARK 470 ARG O 100 CG CD NE CZ NH1 NH2 REMARK 470 SER O 102 OG REMARK 470 ASP O 103 CG OD1 OD2 REMARK 470 ILE O 104 CG1 CG2 CD1 REMARK 470 THR O 107 OG1 CG2 REMARK 470 THR O 108 OG1 CG2 REMARK 470 SER O 109 OG REMARK 470 THR O 110 OG1 CG2 REMARK 470 LEU O 111 CG CD1 CD2 REMARK 470 GLN O 112 CG CD OE1 NE2 REMARK 470 GLU O 113 CG CD OE1 OE2 REMARK 470 GLN O 114 CG CD OE1 NE2 REMARK 470 ILE O 115 CG1 CG2 CD1 REMARK 470 TRP O 117 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP O 117 CZ3 CH2 REMARK 470 MET O 118 CG SD CE REMARK 470 THR O 119 OG1 CG2 REMARK 470 HIS O 120 CG ND1 CD2 CE1 NE2 REMARK 470 ASN O 121 CG OD1 ND2 REMARK 470 PRO O 122 CG CD REMARK 470 PRO O 123 CG CD REMARK 470 ILE O 124 CG1 CG2 CD1 REMARK 470 PRO O 125 CG CD REMARK 470 VAL O 126 CG1 CG2 REMARK 470 GLU O 128 CG CD OE1 OE2 REMARK 470 ILE O 129 CG1 CG2 CD1 REMARK 470 TYR O 130 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS O 131 CG CD CE NZ REMARK 470 ARG O 132 CG CD NE CZ NH1 NH2 REMARK 470 TRP O 133 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP O 133 CZ3 CH2 REMARK 470 ILE O 134 CG1 CG2 CD1 REMARK 470 ILE O 135 CG1 CG2 CD1 REMARK 470 LEU O 136 CG CD1 CD2 REMARK 470 LEU O 138 CG CD1 CD2 REMARK 470 ASN O 139 CG OD1 ND2 REMARK 470 LYS O 140 CG CD CE NZ REMARK 470 ILE O 141 CG1 CG2 CD1 REMARK 470 VAL O 142 CG1 CG2 REMARK 470 ARG O 143 CG CD NE CZ NH1 NH2 REMARK 470 MET O 144 CG SD CE REMARK 470 TYR O 145 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER O 146 OG REMARK 470 PRO O 147 CG CD REMARK 470 THR O 148 OG1 CG2 REMARK 470 SER O 149 OG REMARK 470 ILE O 150 CG1 CG2 CD1 REMARK 470 LEU O 151 CG CD1 CD2 REMARK 470 ASP O 152 CG OD1 OD2 REMARK 470 ILE O 153 CG1 CG2 CD1 REMARK 470 ARG O 154 CG CD NE CZ NH1 NH2 REMARK 470 GLN O 155 CG CD OE1 NE2 REMARK 470 PRO O 157 CG CD REMARK 470 LYS O 158 CG CD CE NZ REMARK 470 GLU O 159 CG CD OE1 OE2 REMARK 470 PRO O 160 CG CD REMARK 470 PHE O 161 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG O 162 CG CD NE CZ NH1 NH2 REMARK 470 ASP O 163 CG OD1 OD2 REMARK 470 TYR O 164 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL O 165 CG1 CG2 REMARK 470 ASP O 166 CG OD1 OD2 REMARK 470 ARG O 167 CG CD NE CZ NH1 NH2 REMARK 470 PHE O 168 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR O 169 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS O 170 CG CD CE NZ REMARK 470 THR O 171 OG1 CG2 REMARK 470 LEU O 172 CG CD1 CD2 REMARK 470 ARG O 173 CG CD NE CZ NH1 NH2 REMARK 470 GLU O 175 CG CD OE1 OE2 REMARK 470 GLN O 176 CG CD OE1 NE2 REMARK 470 SER O 178 OG REMARK 470 GLN O 179 CG CD OE1 NE2 REMARK 470 GLU O 180 CG CD OE1 OE2 REMARK 470 VAL O 181 CG1 CG2 REMARK 470 LYS O 182 CG CD CE NZ REMARK 470 ASN O 183 CG OD1 ND2 REMARK 470 TRP O 184 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP O 184 CZ3 CH2 REMARK 470 MET O 185 CG SD CE REMARK 470 THR O 186 OG1 CG2 REMARK 470 GLU O 187 CG CD OE1 OE2 REMARK 470 THR O 188 OG1 CG2 REMARK 470 LEU O 189 CG CD1 CD2 REMARK 470 LEU O 190 CG CD1 CD2 REMARK 470 VAL O 191 CG1 CG2 REMARK 470 GLN O 192 CG CD OE1 NE2 REMARK 470 ASN O 193 CG OD1 ND2 REMARK 470 ASN O 195 CG OD1 ND2 REMARK 470 PRO O 196 CG CD REMARK 470 ASP O 197 CG OD1 OD2 REMARK 470 CYS O 198 SG REMARK 470 LYS O 199 CG CD CE NZ REMARK 470 THR O 200 OG1 CG2 REMARK 470 ILE O 201 CG1 CG2 CD1 REMARK 470 LEU O 202 CG CD1 CD2 REMARK 470 LYS O 203 CG CD CE NZ REMARK 470 LEU O 205 CG CD1 CD2 REMARK 470 PRO O 207 CG CD REMARK 470 THR O 210 OG1 CG2 REMARK 470 LEU O 211 CG CD1 CD2 REMARK 470 GLU O 212 CG CD OE1 OE2 REMARK 470 GLU O 213 CG CD OE1 OE2 REMARK 470 MET O 214 CG SD CE REMARK 470 MET O 215 CG SD CE REMARK 470 THR O 216 OG1 CG2 REMARK 470 CYS O 218 SG REMARK 470 GLN O 219 CG CD OE1 NE2 REMARK 470 VAL O 221 CG1 CG2 REMARK 470 PRO P 1 CG CD REMARK 470 ILE P 2 CG1 CG2 CD1 REMARK 470 VAL P 3 CG1 CG2 REMARK 470 GLN P 4 CG CD OE1 NE2 REMARK 470 ASN P 5 CG OD1 ND2 REMARK 470 LEU P 6 CG CD1 CD2 REMARK 470 GLN P 7 CG CD OE1 NE2 REMARK 470 GLN P 9 CG CD OE1 NE2 REMARK 470 MET P 10 CG SD CE REMARK 470 VAL P 11 CG1 CG2 REMARK 470 HIS P 12 CG ND1 CD2 CE1 NE2 REMARK 470 GLN P 13 CG CD OE1 NE2 REMARK 470 ILE P 15 CG1 CG2 CD1 REMARK 470 SER P 16 OG REMARK 470 PRO P 17 CG CD REMARK 470 ARG P 18 CG CD NE CZ NH1 NH2 REMARK 470 THR P 19 OG1 CG2 REMARK 470 LEU P 20 CG CD1 CD2 REMARK 470 ASN P 21 CG OD1 ND2 REMARK 470 TRP P 23 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP P 23 CZ3 CH2 REMARK 470 VAL P 24 CG1 CG2 REMARK 470 LYS P 25 CG CD CE NZ REMARK 470 VAL P 26 CG1 CG2 REMARK 470 VAL P 27 CG1 CG2 REMARK 470 GLU P 28 CG CD OE1 OE2 REMARK 470 GLU P 29 CG CD OE1 OE2 REMARK 470 LYS P 30 CG CD CE NZ REMARK 470 PHE P 32 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER P 33 OG REMARK 470 PRO P 34 CG CD REMARK 470 GLU P 35 CG CD OE1 OE2 REMARK 470 VAL P 36 CG1 CG2 REMARK 470 ILE P 37 CG1 CG2 CD1 REMARK 470 PRO P 38 CG CD REMARK 470 MET P 39 CG SD CE REMARK 470 PHE P 40 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER P 41 OG REMARK 470 LEU P 43 CG CD1 CD2 REMARK 470 SER P 44 OG REMARK 470 GLU P 45 CG CD OE1 OE2 REMARK 470 THR P 48 OG1 CG2 REMARK 470 PRO P 49 CG CD REMARK 470 GLN P 50 CG CD OE1 NE2 REMARK 470 ASP P 51 CG OD1 OD2 REMARK 470 LEU P 52 CG CD1 CD2 REMARK 470 ASN P 53 CG OD1 ND2 REMARK 470 THR P 54 OG1 CG2 REMARK 470 MET P 55 CG SD CE REMARK 470 LEU P 56 CG CD1 CD2 REMARK 470 ASN P 57 CG OD1 ND2 REMARK 470 THR P 58 OG1 CG2 REMARK 470 VAL P 59 CG1 CG2 REMARK 470 HIS P 62 CG ND1 CD2 CE1 NE2 REMARK 470 GLN P 63 CG CD OE1 NE2 REMARK 470 MET P 66 CG SD CE REMARK 470 GLN P 67 CG CD OE1 NE2 REMARK 470 MET P 68 CG SD CE REMARK 470 LEU P 69 CG CD1 CD2 REMARK 470 LYS P 70 CG CD CE NZ REMARK 470 GLU P 71 CG CD OE1 OE2 REMARK 470 THR P 72 OG1 CG2 REMARK 470 ILE P 73 CG1 CG2 CD1 REMARK 470 ASN P 74 CG OD1 ND2 REMARK 470 GLU P 75 CG CD OE1 OE2 REMARK 470 GLU P 76 CG CD OE1 OE2 REMARK 470 GLU P 79 CG CD OE1 OE2 REMARK 470 TRP P 80 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP P 80 CZ3 CH2 REMARK 470 ASP P 81 CG OD1 OD2 REMARK 470 ARG P 82 CG CD NE CZ NH1 NH2 REMARK 470 LEU P 83 CG CD1 CD2 REMARK 470 HIS P 84 CG ND1 CD2 CE1 NE2 REMARK 470 PRO P 85 CG CD REMARK 470 VAL P 86 CG1 CG2 REMARK 470 HIS P 87 CG ND1 CD2 CE1 NE2 REMARK 470 PRO P 90 CG CD REMARK 470 ILE P 91 CG1 CG2 CD1 REMARK 470 PRO P 93 CG CD REMARK 470 GLN P 95 CG CD OE1 NE2 REMARK 470 MET P 96 CG SD CE REMARK 470 ARG P 97 CG CD NE CZ NH1 NH2 REMARK 470 GLU P 98 CG CD OE1 OE2 REMARK 470 PRO P 99 CG CD REMARK 470 ARG P 100 CG CD NE CZ NH1 NH2 REMARK 470 SER P 102 OG REMARK 470 ASP P 103 CG OD1 OD2 REMARK 470 ILE P 104 CG1 CG2 CD1 REMARK 470 THR P 107 OG1 CG2 REMARK 470 THR P 108 OG1 CG2 REMARK 470 SER P 109 OG REMARK 470 THR P 110 OG1 CG2 REMARK 470 LEU P 111 CG CD1 CD2 REMARK 470 GLN P 112 CG CD OE1 NE2 REMARK 470 GLU P 113 CG CD OE1 OE2 REMARK 470 GLN P 114 CG CD OE1 NE2 REMARK 470 ILE P 115 CG1 CG2 CD1 REMARK 470 TRP P 117 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP P 117 CZ3 CH2 REMARK 470 MET P 118 CG SD CE REMARK 470 THR P 119 OG1 CG2 REMARK 470 HIS P 120 CG ND1 CD2 CE1 NE2 REMARK 470 ASN P 121 CG OD1 ND2 REMARK 470 PRO P 122 CG CD REMARK 470 PRO P 123 CG CD REMARK 470 ILE P 124 CG1 CG2 CD1 REMARK 470 PRO P 125 CG CD REMARK 470 VAL P 126 CG1 CG2 REMARK 470 GLU P 128 CG CD OE1 OE2 REMARK 470 ILE P 129 CG1 CG2 CD1 REMARK 470 TYR P 130 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS P 131 CG CD CE NZ REMARK 470 ARG P 132 CG CD NE CZ NH1 NH2 REMARK 470 TRP P 133 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP P 133 CZ3 CH2 REMARK 470 ILE P 134 CG1 CG2 CD1 REMARK 470 ILE P 135 CG1 CG2 CD1 REMARK 470 LEU P 136 CG CD1 CD2 REMARK 470 LEU P 138 CG CD1 CD2 REMARK 470 ASN P 139 CG OD1 ND2 REMARK 470 LYS P 140 CG CD CE NZ REMARK 470 ILE P 141 CG1 CG2 CD1 REMARK 470 VAL P 142 CG1 CG2 REMARK 470 ARG P 143 CG CD NE CZ NH1 NH2 REMARK 470 MET P 144 CG SD CE REMARK 470 TYR P 145 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER P 146 OG REMARK 470 PRO P 147 CG CD REMARK 470 THR P 148 OG1 CG2 REMARK 470 SER P 149 OG REMARK 470 ILE P 150 CG1 CG2 CD1 REMARK 470 LEU P 151 CG CD1 CD2 REMARK 470 ASP P 152 CG OD1 OD2 REMARK 470 ILE P 153 CG1 CG2 CD1 REMARK 470 ARG P 154 CG CD NE CZ NH1 NH2 REMARK 470 GLN P 155 CG CD OE1 NE2 REMARK 470 PRO P 157 CG CD REMARK 470 LYS P 158 CG CD CE NZ REMARK 470 GLU P 159 CG CD OE1 OE2 REMARK 470 PRO P 160 CG CD REMARK 470 PHE P 161 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG P 162 CG CD NE CZ NH1 NH2 REMARK 470 ASP P 163 CG OD1 OD2 REMARK 470 TYR P 164 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL P 165 CG1 CG2 REMARK 470 ASP P 166 CG OD1 OD2 REMARK 470 ARG P 167 CG CD NE CZ NH1 NH2 REMARK 470 PHE P 168 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR P 169 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS P 170 CG CD CE NZ REMARK 470 THR P 171 OG1 CG2 REMARK 470 LEU P 172 CG CD1 CD2 REMARK 470 ARG P 173 CG CD NE CZ NH1 NH2 REMARK 470 GLU P 175 CG CD OE1 OE2 REMARK 470 GLN P 176 CG CD OE1 NE2 REMARK 470 SER P 178 OG REMARK 470 GLN P 179 CG CD OE1 NE2 REMARK 470 GLU P 180 CG CD OE1 OE2 REMARK 470 VAL P 181 CG1 CG2 REMARK 470 LYS P 182 CG CD CE NZ REMARK 470 ASN P 183 CG OD1 ND2 REMARK 470 TRP P 184 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP P 184 CZ3 CH2 REMARK 470 MET P 185 CG SD CE REMARK 470 THR P 186 OG1 CG2 REMARK 470 GLU P 187 CG CD OE1 OE2 REMARK 470 THR P 188 OG1 CG2 REMARK 470 LEU P 189 CG CD1 CD2 REMARK 470 LEU P 190 CG CD1 CD2 REMARK 470 VAL P 191 CG1 CG2 REMARK 470 GLN P 192 CG CD OE1 NE2 REMARK 470 ASN P 193 CG OD1 ND2 REMARK 470 ASN P 195 CG OD1 ND2 REMARK 470 PRO P 196 CG CD REMARK 470 ASP P 197 CG OD1 OD2 REMARK 470 CYS P 198 SG REMARK 470 LYS P 199 CG CD CE NZ REMARK 470 THR P 200 OG1 CG2 REMARK 470 ILE P 201 CG1 CG2 CD1 REMARK 470 LEU P 202 CG CD1 CD2 REMARK 470 LYS P 203 CG CD CE NZ REMARK 470 LEU P 205 CG CD1 CD2 REMARK 470 PRO P 207 CG CD REMARK 470 THR P 210 OG1 CG2 REMARK 470 LEU P 211 CG CD1 CD2 REMARK 470 GLU P 212 CG CD OE1 OE2 REMARK 470 GLU P 213 CG CD OE1 OE2 REMARK 470 MET P 214 CG SD CE REMARK 470 MET P 215 CG SD CE REMARK 470 THR P 216 OG1 CG2 REMARK 470 CYS P 218 SG REMARK 470 GLN P 219 CG CD OE1 NE2 REMARK 470 VAL P 221 CG1 CG2 REMARK 470 PRO Q 1 CG CD REMARK 470 ILE Q 2 CG1 CG2 CD1 REMARK 470 VAL Q 3 CG1 CG2 REMARK 470 GLN Q 4 CG CD OE1 NE2 REMARK 470 ASN Q 5 CG OD1 ND2 REMARK 470 LEU Q 6 CG CD1 CD2 REMARK 470 GLN Q 7 CG CD OE1 NE2 REMARK 470 GLN Q 9 CG CD OE1 NE2 REMARK 470 MET Q 10 CG SD CE REMARK 470 VAL Q 11 CG1 CG2 REMARK 470 HIS Q 12 CG ND1 CD2 CE1 NE2 REMARK 470 GLN Q 13 CG CD OE1 NE2 REMARK 470 ILE Q 15 CG1 CG2 CD1 REMARK 470 SER Q 16 OG REMARK 470 PRO Q 17 CG CD REMARK 470 ARG Q 18 CG CD NE CZ NH1 NH2 REMARK 470 THR Q 19 OG1 CG2 REMARK 470 LEU Q 20 CG CD1 CD2 REMARK 470 ASN Q 21 CG OD1 ND2 REMARK 470 TRP Q 23 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP Q 23 CZ3 CH2 REMARK 470 VAL Q 24 CG1 CG2 REMARK 470 LYS Q 25 CG CD CE NZ REMARK 470 VAL Q 26 CG1 CG2 REMARK 470 VAL Q 27 CG1 CG2 REMARK 470 GLU Q 28 CG CD OE1 OE2 REMARK 470 GLU Q 29 CG CD OE1 OE2 REMARK 470 LYS Q 30 CG CD CE NZ REMARK 470 PHE Q 32 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER Q 33 OG REMARK 470 PRO Q 34 CG CD REMARK 470 GLU Q 35 CG CD OE1 OE2 REMARK 470 VAL Q 36 CG1 CG2 REMARK 470 ILE Q 37 CG1 CG2 CD1 REMARK 470 PRO Q 38 CG CD REMARK 470 MET Q 39 CG SD CE REMARK 470 PHE Q 40 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER Q 41 OG REMARK 470 LEU Q 43 CG CD1 CD2 REMARK 470 SER Q 44 OG REMARK 470 GLU Q 45 CG CD OE1 OE2 REMARK 470 THR Q 48 OG1 CG2 REMARK 470 PRO Q 49 CG CD REMARK 470 GLN Q 50 CG CD OE1 NE2 REMARK 470 ASP Q 51 CG OD1 OD2 REMARK 470 LEU Q 52 CG CD1 CD2 REMARK 470 ASN Q 53 CG OD1 ND2 REMARK 470 THR Q 54 OG1 CG2 REMARK 470 MET Q 55 CG SD CE REMARK 470 LEU Q 56 CG CD1 CD2 REMARK 470 ASN Q 57 CG OD1 ND2 REMARK 470 THR Q 58 OG1 CG2 REMARK 470 VAL Q 59 CG1 CG2 REMARK 470 HIS Q 62 CG ND1 CD2 CE1 NE2 REMARK 470 GLN Q 63 CG CD OE1 NE2 REMARK 470 MET Q 66 CG SD CE REMARK 470 GLN Q 67 CG CD OE1 NE2 REMARK 470 MET Q 68 CG SD CE REMARK 470 LEU Q 69 CG CD1 CD2 REMARK 470 LYS Q 70 CG CD CE NZ REMARK 470 GLU Q 71 CG CD OE1 OE2 REMARK 470 THR Q 72 OG1 CG2 REMARK 470 ILE Q 73 CG1 CG2 CD1 REMARK 470 ASN Q 74 CG OD1 ND2 REMARK 470 GLU Q 75 CG CD OE1 OE2 REMARK 470 GLU Q 76 CG CD OE1 OE2 REMARK 470 GLU Q 79 CG CD OE1 OE2 REMARK 470 TRP Q 80 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP Q 80 CZ3 CH2 REMARK 470 ASP Q 81 CG OD1 OD2 REMARK 470 ARG Q 82 CG CD NE CZ NH1 NH2 REMARK 470 LEU Q 83 CG CD1 CD2 REMARK 470 HIS Q 84 CG ND1 CD2 CE1 NE2 REMARK 470 PRO Q 85 CG CD REMARK 470 VAL Q 86 CG1 CG2 REMARK 470 HIS Q 87 CG ND1 CD2 CE1 NE2 REMARK 470 PRO Q 90 CG CD REMARK 470 ILE Q 91 CG1 CG2 CD1 REMARK 470 PRO Q 93 CG CD REMARK 470 GLN Q 95 CG CD OE1 NE2 REMARK 470 MET Q 96 CG SD CE REMARK 470 ARG Q 97 CG CD NE CZ NH1 NH2 REMARK 470 GLU Q 98 CG CD OE1 OE2 REMARK 470 PRO Q 99 CG CD REMARK 470 ARG Q 100 CG CD NE CZ NH1 NH2 REMARK 470 SER Q 102 OG REMARK 470 ASP Q 103 CG OD1 OD2 REMARK 470 ILE Q 104 CG1 CG2 CD1 REMARK 470 THR Q 107 OG1 CG2 REMARK 470 THR Q 108 OG1 CG2 REMARK 470 SER Q 109 OG REMARK 470 THR Q 110 OG1 CG2 REMARK 470 LEU Q 111 CG CD1 CD2 REMARK 470 GLN Q 112 CG CD OE1 NE2 REMARK 470 GLU Q 113 CG CD OE1 OE2 REMARK 470 GLN Q 114 CG CD OE1 NE2 REMARK 470 ILE Q 115 CG1 CG2 CD1 REMARK 470 TRP Q 117 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP Q 117 CZ3 CH2 REMARK 470 MET Q 118 CG SD CE REMARK 470 THR Q 119 OG1 CG2 REMARK 470 HIS Q 120 CG ND1 CD2 CE1 NE2 REMARK 470 ASN Q 121 CG OD1 ND2 REMARK 470 PRO Q 122 CG CD REMARK 470 PRO Q 123 CG CD REMARK 470 ILE Q 124 CG1 CG2 CD1 REMARK 470 PRO Q 125 CG CD REMARK 470 VAL Q 126 CG1 CG2 REMARK 470 GLU Q 128 CG CD OE1 OE2 REMARK 470 ILE Q 129 CG1 CG2 CD1 REMARK 470 TYR Q 130 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS Q 131 CG CD CE NZ REMARK 470 ARG Q 132 CG CD NE CZ NH1 NH2 REMARK 470 TRP Q 133 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP Q 133 CZ3 CH2 REMARK 470 ILE Q 134 CG1 CG2 CD1 REMARK 470 ILE Q 135 CG1 CG2 CD1 REMARK 470 LEU Q 136 CG CD1 CD2 REMARK 470 LEU Q 138 CG CD1 CD2 REMARK 470 ASN Q 139 CG OD1 ND2 REMARK 470 LYS Q 140 CG CD CE NZ REMARK 470 ILE Q 141 CG1 CG2 CD1 REMARK 470 VAL Q 142 CG1 CG2 REMARK 470 ARG Q 143 CG CD NE CZ NH1 NH2 REMARK 470 MET Q 144 CG SD CE REMARK 470 TYR Q 145 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER Q 146 OG REMARK 470 PRO Q 147 CG CD REMARK 470 THR Q 148 OG1 CG2 REMARK 470 SER Q 149 OG REMARK 470 ILE Q 150 CG1 CG2 CD1 REMARK 470 LEU Q 151 CG CD1 CD2 REMARK 470 ASP Q 152 CG OD1 OD2 REMARK 470 ILE Q 153 CG1 CG2 CD1 REMARK 470 ARG Q 154 CG CD NE CZ NH1 NH2 REMARK 470 GLN Q 155 CG CD OE1 NE2 REMARK 470 PRO Q 157 CG CD REMARK 470 LYS Q 158 CG CD CE NZ REMARK 470 GLU Q 159 CG CD OE1 OE2 REMARK 470 PRO Q 160 CG CD REMARK 470 PHE Q 161 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG Q 162 CG CD NE CZ NH1 NH2 REMARK 470 ASP Q 163 CG OD1 OD2 REMARK 470 TYR Q 164 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL Q 165 CG1 CG2 REMARK 470 ASP Q 166 CG OD1 OD2 REMARK 470 ARG Q 167 CG CD NE CZ NH1 NH2 REMARK 470 PHE Q 168 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR Q 169 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS Q 170 CG CD CE NZ REMARK 470 THR Q 171 OG1 CG2 REMARK 470 LEU Q 172 CG CD1 CD2 REMARK 470 ARG Q 173 CG CD NE CZ NH1 NH2 REMARK 470 GLU Q 175 CG CD OE1 OE2 REMARK 470 GLN Q 176 CG CD OE1 NE2 REMARK 470 SER Q 178 OG REMARK 470 GLN Q 179 CG CD OE1 NE2 REMARK 470 GLU Q 180 CG CD OE1 OE2 REMARK 470 VAL Q 181 CG1 CG2 REMARK 470 LYS Q 182 CG CD CE NZ REMARK 470 ASN Q 183 CG OD1 ND2 REMARK 470 TRP Q 184 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP Q 184 CZ3 CH2 REMARK 470 MET Q 185 CG SD CE REMARK 470 THR Q 186 OG1 CG2 REMARK 470 GLU Q 187 CG CD OE1 OE2 REMARK 470 THR Q 188 OG1 CG2 REMARK 470 LEU Q 189 CG CD1 CD2 REMARK 470 LEU Q 190 CG CD1 CD2 REMARK 470 VAL Q 191 CG1 CG2 REMARK 470 GLN Q 192 CG CD OE1 NE2 REMARK 470 ASN Q 193 CG OD1 ND2 REMARK 470 ASN Q 195 CG OD1 ND2 REMARK 470 PRO Q 196 CG CD REMARK 470 ASP Q 197 CG OD1 OD2 REMARK 470 CYS Q 198 SG REMARK 470 LYS Q 199 CG CD CE NZ REMARK 470 THR Q 200 OG1 CG2 REMARK 470 ILE Q 201 CG1 CG2 CD1 REMARK 470 LEU Q 202 CG CD1 CD2 REMARK 470 LYS Q 203 CG CD CE NZ REMARK 470 LEU Q 205 CG CD1 CD2 REMARK 470 PRO Q 207 CG CD REMARK 470 THR Q 210 OG1 CG2 REMARK 470 LEU Q 211 CG CD1 CD2 REMARK 470 GLU Q 212 CG CD OE1 OE2 REMARK 470 GLU Q 213 CG CD OE1 OE2 REMARK 470 MET Q 214 CG SD CE REMARK 470 MET Q 215 CG SD CE REMARK 470 THR Q 216 OG1 CG2 REMARK 470 CYS Q 218 SG REMARK 470 GLN Q 219 CG CD OE1 NE2 REMARK 470 VAL Q 221 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR N 54 OG1 THR N 58 2.13 REMARK 500 OG1 THR N 48 OD1 ASP N 51 2.15 REMARK 500 OD1 ASP M 103 OG SER M 109 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 44 38.94 -97.37 REMARK 500 ARG A 97 -168.64 -76.94 REMARK 500 ALA L 31 -125.00 53.14 REMARK 500 THR L 108 30.76 -140.13 REMARK 500 ALA M 31 -126.97 52.64 REMARK 500 ALA N 31 -126.90 53.28 REMARK 500 ALA O 31 -127.97 52.61 REMARK 500 ALA P 31 -127.88 52.54 REMARK 500 ALA Q 31 -127.87 52.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-26715 RELATED DB: EMDB REMARK 900 STRUCTURE OF HIV-1 CAPSID DECLINATION DBREF 7URN A 1 231 UNP P12493 GAG_HV1N5 133 363 DBREF 7URN L 1 231 UNP P12493 GAG_HV1N5 133 363 DBREF 7URN M 1 231 UNP P12493 GAG_HV1N5 133 363 DBREF 7URN N 1 231 UNP P12493 GAG_HV1N5 133 363 DBREF 7URN O 1 231 UNP P12493 GAG_HV1N5 133 363 DBREF 7URN P 1 231 UNP P12493 GAG_HV1N5 133 363 DBREF 7URN Q 1 231 UNP P12493 GAG_HV1N5 133 363 SEQRES 1 A 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 A 231 ALA ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 A 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 A 231 PHE SER ALA LEU SER GLU GLY ALA THR PRO GLN ASP LEU SEQRES 5 A 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 A 231 MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA ALA SEQRES 7 A 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 A 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 A 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 A 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 A 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 A 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 A 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 A 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 A 231 ASN TRP MET THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 A 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 A 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 A 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 L 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 L 231 ALA ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 L 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 L 231 PHE SER ALA LEU SER GLU GLY ALA THR PRO GLN ASP LEU SEQRES 5 L 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 L 231 MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA ALA SEQRES 7 L 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 L 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 L 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 L 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 L 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 L 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 L 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 L 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 L 231 ASN TRP MET THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 L 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 L 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 L 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 M 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 M 231 ALA ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 M 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 M 231 PHE SER ALA LEU SER GLU GLY ALA THR PRO GLN ASP LEU SEQRES 5 M 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 M 231 MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA ALA SEQRES 7 M 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 M 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 M 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 M 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 M 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 M 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 M 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 M 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 M 231 ASN TRP MET THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 M 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 M 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 M 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 N 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 N 231 ALA ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 N 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 N 231 PHE SER ALA LEU SER GLU GLY ALA THR PRO GLN ASP LEU SEQRES 5 N 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 N 231 MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA ALA SEQRES 7 N 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 N 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 N 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 N 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 N 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 N 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 N 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 N 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 N 231 ASN TRP MET THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 N 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 N 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 N 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 O 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 O 231 ALA ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 O 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 O 231 PHE SER ALA LEU SER GLU GLY ALA THR PRO GLN ASP LEU SEQRES 5 O 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 O 231 MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA ALA SEQRES 7 O 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 O 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 O 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 O 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 O 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 O 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 O 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 O 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 O 231 ASN TRP MET THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 O 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 O 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 O 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 P 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 P 231 ALA ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 P 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 P 231 PHE SER ALA LEU SER GLU GLY ALA THR PRO GLN ASP LEU SEQRES 5 P 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 P 231 MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA ALA SEQRES 7 P 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 P 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 P 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 P 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 P 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 P 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 P 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 P 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 P 231 ASN TRP MET THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 P 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 P 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 P 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 Q 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 Q 231 ALA ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 Q 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 Q 231 PHE SER ALA LEU SER GLU GLY ALA THR PRO GLN ASP LEU SEQRES 5 Q 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 Q 231 MET GLN MET LEU LYS GLU THR ILE ASN GLU GLU ALA ALA SEQRES 7 Q 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 Q 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 Q 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 Q 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 Q 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 Q 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 Q 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 Q 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 Q 231 ASN TRP MET THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 Q 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 Q 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 Q 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU HET IHP A 401 36 HET IHP A 402 36 HETNAM IHP INOSITOL HEXAKISPHOSPHATE HETSYN IHP MYO-INOSITOL HEXAKISPHOSPHATE; INOSITOL 1,2,3,4,5,6- HETSYN 2 IHP HEXAKISPHOSPHATE FORMUL 8 IHP 2(C6 H18 O24 P6) HELIX 1 AA1 SER A 16 LYS A 30 1 15 HELIX 2 AA2 GLU A 35 SER A 44 1 10 HELIX 3 AA3 THR A 48 ASN A 57 1 10 HELIX 4 AA4 THR A 58 GLY A 61 5 4 HELIX 5 AA5 HIS A 62 HIS A 84 1 23 HELIX 6 AA6 THR A 110 THR A 119 1 10 HELIX 7 AA7 VAL A 126 TYR A 145 1 20 HELIX 8 AA8 SER A 149 ILE A 153 5 5 HELIX 9 AA9 PRO A 160 GLN A 176 1 17 HELIX 10 AB1 SER A 178 ASN A 193 1 16 HELIX 11 AB2 ASN A 195 GLY A 206 1 12 HELIX 12 AB3 THR A 210 CYS A 218 1 9 HELIX 13 AB4 SER L 16 LYS L 30 1 15 HELIX 14 AB5 GLU L 35 SER L 44 1 10 HELIX 15 AB6 THR L 48 THR L 58 1 11 HELIX 16 AB7 HIS L 62 HIS L 84 1 23 HELIX 17 AB8 ARG L 100 ALA L 105 1 6 HELIX 18 AB9 THR L 110 HIS L 120 1 11 HELIX 19 AC1 PRO L 125 SER L 146 1 22 HELIX 20 AC2 SER L 149 ILE L 153 5 5 HELIX 21 AC3 PRO L 160 GLU L 175 1 16 HELIX 22 AC4 SER L 178 ASN L 193 1 16 HELIX 23 AC5 ASN L 195 GLY L 206 1 12 HELIX 24 AC6 THR L 210 CYS L 218 1 9 HELIX 25 AC7 SER M 16 ALA M 31 1 16 HELIX 26 AC8 GLU M 35 SER M 44 1 10 HELIX 27 AC9 THR M 48 THR M 58 1 11 HELIX 28 AD1 HIS M 62 HIS M 84 1 23 HELIX 29 AD2 ARG M 100 ALA M 105 1 6 HELIX 30 AD3 THR M 110 MET M 118 1 9 HELIX 31 AD4 PRO M 125 TYR M 145 1 21 HELIX 32 AD5 SER M 149 ILE M 153 5 5 HELIX 33 AD6 PRO M 160 GLU M 175 1 16 HELIX 34 AD7 SER M 178 ALA M 194 1 17 HELIX 35 AD8 ASN M 195 GLY M 206 1 12 HELIX 36 AD9 THR M 210 CYS M 218 1 9 HELIX 37 AE1 SER N 16 LYS N 30 1 15 HELIX 38 AE2 GLU N 35 SER N 44 1 10 HELIX 39 AE3 THR N 48 THR N 58 1 11 HELIX 40 AE4 HIS N 62 HIS N 84 1 23 HELIX 41 AE5 ARG N 100 ALA N 105 1 6 HELIX 42 AE6 THR N 110 HIS N 120 1 11 HELIX 43 AE7 PRO N 125 SER N 146 1 22 HELIX 44 AE8 SER N 149 ILE N 153 5 5 HELIX 45 AE9 PRO N 160 GLU N 175 1 16 HELIX 46 AF1 SER N 178 ASN N 193 1 16 HELIX 47 AF2 ASN N 195 GLY N 206 1 12 HELIX 48 AF3 THR N 210 CYS N 218 1 9 HELIX 49 AF4 SER O 16 ALA O 31 1 16 HELIX 50 AF5 GLU O 35 SER O 44 1 10 HELIX 51 AF6 THR O 48 THR O 58 1 11 HELIX 52 AF7 HIS O 62 HIS O 84 1 23 HELIX 53 AF8 ARG O 100 ALA O 105 1 6 HELIX 54 AF9 THR O 110 HIS O 120 1 11 HELIX 55 AG1 PRO O 125 TYR O 145 1 21 HELIX 56 AG2 SER O 149 ILE O 153 5 5 HELIX 57 AG3 PRO O 160 GLU O 175 1 16 HELIX 58 AG4 SER O 178 ALA O 194 1 17 HELIX 59 AG5 ASN O 195 GLY O 206 1 12 HELIX 60 AG6 THR O 210 CYS O 218 1 9 HELIX 61 AG7 SER P 16 ALA P 31 1 16 HELIX 62 AG8 GLU P 35 SER P 44 1 10 HELIX 63 AG9 THR P 48 THR P 58 1 11 HELIX 64 AH1 HIS P 62 HIS P 84 1 23 HELIX 65 AH2 ARG P 100 ALA P 105 1 6 HELIX 66 AH3 THR P 110 HIS P 120 1 11 HELIX 67 AH4 PRO P 125 TYR P 145 1 21 HELIX 68 AH5 SER P 149 ILE P 153 5 5 HELIX 69 AH6 PRO P 160 GLU P 175 1 16 HELIX 70 AH7 SER P 178 ALA P 194 1 17 HELIX 71 AH8 ASN P 195 GLY P 206 1 12 HELIX 72 AH9 THR P 210 CYS P 218 1 9 HELIX 73 AI1 SER Q 16 ALA Q 31 1 16 HELIX 74 AI2 GLU Q 35 SER Q 44 1 10 HELIX 75 AI3 THR Q 48 THR Q 58 1 11 HELIX 76 AI4 HIS Q 62 HIS Q 84 1 23 HELIX 77 AI5 ARG Q 100 ALA Q 105 1 6 HELIX 78 AI6 THR Q 110 HIS Q 120 1 11 HELIX 79 AI7 PRO Q 125 TYR Q 145 1 21 HELIX 80 AI8 SER Q 149 ILE Q 153 5 5 HELIX 81 AI9 PRO Q 160 GLU Q 175 1 16 HELIX 82 AJ1 SER Q 178 ALA Q 194 1 17 HELIX 83 AJ2 ASN Q 195 GLY Q 206 1 12 HELIX 84 AJ3 THR Q 210 CYS Q 218 1 9 SHEET 1 AA1 2 ILE A 2 GLN A 4 0 SHEET 2 AA1 2 MET A 10 HIS A 12 -1 O VAL A 11 N VAL A 3 SHEET 1 AA2 2 ILE L 2 GLN L 4 0 SHEET 2 AA2 2 MET L 10 HIS L 12 -1 O VAL L 11 N VAL L 3 SHEET 1 AA3 2 ILE M 2 GLN M 4 0 SHEET 2 AA3 2 MET M 10 HIS M 12 -1 O VAL M 11 N VAL M 3 SHEET 1 AA4 2 ILE N 2 GLN N 4 0 SHEET 2 AA4 2 MET N 10 HIS N 12 -1 O VAL N 11 N VAL N 3 SHEET 1 AA5 2 ILE O 2 GLN O 4 0 SHEET 2 AA5 2 MET O 10 HIS O 12 -1 O VAL O 11 N VAL O 3 SHEET 1 AA6 2 ILE P 2 GLN P 4 0 SHEET 2 AA6 2 MET P 10 HIS P 12 -1 O VAL P 11 N VAL P 3 SHEET 1 AA7 2 ILE Q 2 GLN Q 4 0 SHEET 2 AA7 2 MET Q 10 HIS Q 12 -1 O VAL Q 11 N VAL Q 3 CISPEP 1 ASN A 121 PRO A 122 0 -0.46 CISPEP 2 ASN L 121 PRO L 122 0 -0.37 CISPEP 3 ASN M 121 PRO M 122 0 1.23 CISPEP 4 ASN N 121 PRO N 122 0 1.46 CISPEP 5 ASN O 121 PRO O 122 0 1.03 CISPEP 6 ASN P 121 PRO P 122 0 1.07 CISPEP 7 ASN Q 121 PRO Q 122 0 1.15 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000