HEADER OXIDOREDUCTASE/INHIBITOR 26-APR-22 7UT5 TITLE ACINETOBACTER BAUMANNII DIHYDROOROTATE DEHYDROGENASE BOUND WITH TITLE 2 INHIBITOR DSM186 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROOROTATE DEHYDROGENASE (QUINONE); COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DHODEHASE,DHOD,DHODASE,DIHYDROOROTATE OXIDASE; COMPND 5 EC: 1.3.5.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 STRAIN: AB307-0294; SOURCE 5 GENE: PYRD, ABBFA_001187; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS INHIBITOR, COMPLEX, FLAVOPROTEIN, OXIDOREDUCTASE, OXIDOREDUCTASE- KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.DENG,M.PHILLIPS,D.TOMCHICK REVDAT 2 25-OCT-23 7UT5 1 REMARK REVDAT 1 28-DEC-22 7UT5 0 JRNL AUTH T.A.RUSSO,T.C.UMLAND,X.DENG,F.EL MAZOUNI,S.KOKKONDA,R.OLSON, JRNL AUTH 2 U.CARLINO-MACDONALD,J.BEANAN,C.L.ALVARADO,D.R.TOMCHICK, JRNL AUTH 3 A.HUTSON,H.CHEN,B.POSNER,P.K.RATHOD,S.A.CHARMAN,M.A.PHILLIPS JRNL TITL REPURPOSED DIHYDROOROTATE DEHYDROGENASE INHIBITORS WITH JRNL TITL 2 EFFICACY AGAINST DRUG-RESISTANT ACINETOBACTER BAUMANNII. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 16119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 36512492 JRNL DOI 10.1073/PNAS.2213116119 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 130840 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.510 REMARK 3 FREE R VALUE TEST SET COUNT : 1981 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.2000 - 3.3700 0.99 9489 140 0.1489 0.1480 REMARK 3 2 3.3700 - 2.6800 1.00 9395 148 0.1588 0.1663 REMARK 3 3 2.6800 - 2.3400 1.00 9418 140 0.1542 0.1725 REMARK 3 4 2.3400 - 2.1200 1.00 9426 136 0.1478 0.1632 REMARK 3 5 2.1200 - 1.9700 1.00 9353 146 0.1530 0.1688 REMARK 3 6 1.9700 - 1.8600 1.00 9379 160 0.1558 0.1495 REMARK 3 7 1.8600 - 1.7600 1.00 9348 147 0.1732 0.2125 REMARK 3 8 1.7600 - 1.6900 1.00 9329 139 0.1841 0.1799 REMARK 3 9 1.6900 - 1.6200 1.00 9370 146 0.1912 0.2062 REMARK 3 10 1.6200 - 1.5700 1.00 9378 161 0.2011 0.1978 REMARK 3 11 1.5700 - 1.5200 1.00 9360 121 0.2247 0.2583 REMARK 3 12 1.5200 - 1.4700 0.98 9157 155 0.2549 0.2823 REMARK 3 13 1.4700 - 1.4300 0.93 8705 120 0.2927 0.3108 REMARK 3 14 1.4300 - 1.4000 0.83 7752 122 0.3404 0.3559 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.158 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5217 REMARK 3 ANGLE : 0.986 7106 REMARK 3 CHIRALITY : 0.074 812 REMARK 3 PLANARITY : 0.010 902 REMARK 3 DIHEDRAL : 14.530 1945 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7885 12.2115 -56.7144 REMARK 3 T TENSOR REMARK 3 T11: 0.2448 T22: 0.1782 REMARK 3 T33: 0.2215 T12: -0.0175 REMARK 3 T13: 0.0392 T23: 0.0793 REMARK 3 L TENSOR REMARK 3 L11: 3.5613 L22: 5.1668 REMARK 3 L33: 4.0830 L12: -2.0971 REMARK 3 L13: -2.1050 L23: 2.1105 REMARK 3 S TENSOR REMARK 3 S11: 0.0220 S12: 0.2779 S13: 0.3199 REMARK 3 S21: -0.4710 S22: -0.0160 S23: -0.2963 REMARK 3 S31: -0.1315 S32: 0.2025 S33: 0.0079 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.7050 0.8226 -47.5961 REMARK 3 T TENSOR REMARK 3 T11: 0.0982 T22: 0.0980 REMARK 3 T33: 0.1995 T12: -0.0022 REMARK 3 T13: 0.0252 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 1.7925 L22: 1.7616 REMARK 3 L33: 0.5660 L12: -0.2290 REMARK 3 L13: 0.0851 L23: -0.1065 REMARK 3 S TENSOR REMARK 3 S11: -0.0100 S12: 0.0909 S13: 0.0163 REMARK 3 S21: -0.1410 S22: -0.0239 S23: -0.1467 REMARK 3 S31: 0.0061 S32: 0.0583 S33: 0.0255 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3234 -10.7220 -42.4486 REMARK 3 T TENSOR REMARK 3 T11: 0.1108 T22: 0.0963 REMARK 3 T33: 0.2603 T12: 0.0098 REMARK 3 T13: 0.0195 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 3.9300 L22: 2.5683 REMARK 3 L33: 0.5989 L12: 0.4635 REMARK 3 L13: 0.6881 L23: -0.6256 REMARK 3 S TENSOR REMARK 3 S11: -0.0259 S12: -0.1391 S13: -0.4526 REMARK 3 S21: -0.0270 S22: 0.0432 S23: 0.1398 REMARK 3 S31: 0.0428 S32: -0.0701 S33: -0.0325 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 205 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2040 -18.8696 -34.1216 REMARK 3 T TENSOR REMARK 3 T11: 0.1771 T22: 0.1630 REMARK 3 T33: 0.3279 T12: 0.0166 REMARK 3 T13: 0.0269 T23: 0.0937 REMARK 3 L TENSOR REMARK 3 L11: 6.8920 L22: 8.8944 REMARK 3 L33: 7.8640 L12: -4.0776 REMARK 3 L13: -3.6028 L23: 5.8685 REMARK 3 S TENSOR REMARK 3 S11: -0.0832 S12: -0.1991 S13: -0.7879 REMARK 3 S21: 0.4051 S22: -0.0361 S23: 0.3432 REMARK 3 S31: 0.0323 S32: -0.2282 S33: 0.1702 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 206 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5092 1.1444 -31.0332 REMARK 3 T TENSOR REMARK 3 T11: 0.1545 T22: 0.1847 REMARK 3 T33: 0.1754 T12: 0.0310 REMARK 3 T13: 0.0321 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.0319 L22: 3.2169 REMARK 3 L33: 1.0585 L12: -0.5802 REMARK 3 L13: 0.3878 L23: -0.6509 REMARK 3 S TENSOR REMARK 3 S11: -0.1595 S12: -0.3972 S13: -0.0668 REMARK 3 S21: 0.5986 S22: 0.1713 S23: 0.1629 REMARK 3 S31: -0.1090 S32: -0.0648 S33: -0.0148 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 262 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7439 6.4028 -34.1360 REMARK 3 T TENSOR REMARK 3 T11: 0.1597 T22: 0.1635 REMARK 3 T33: 0.3454 T12: 0.0096 REMARK 3 T13: -0.0729 T23: -0.0280 REMARK 3 L TENSOR REMARK 3 L11: 2.3278 L22: 2.7196 REMARK 3 L33: 0.5942 L12: -0.4109 REMARK 3 L13: 0.1004 L23: -0.7363 REMARK 3 S TENSOR REMARK 3 S11: -0.1046 S12: -0.3056 S13: 0.3398 REMARK 3 S21: 0.3483 S22: -0.0238 S23: -0.6969 REMARK 3 S31: -0.1369 S32: 0.1382 S33: 0.1002 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -5 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5418 -25.9601 -16.3024 REMARK 3 T TENSOR REMARK 3 T11: 0.6245 T22: 0.4046 REMARK 3 T33: 0.2254 T12: -0.0010 REMARK 3 T13: 0.0054 T23: -0.0416 REMARK 3 L TENSOR REMARK 3 L11: 3.3343 L22: 3.6185 REMARK 3 L33: 1.7802 L12: 0.4216 REMARK 3 L13: -1.7385 L23: 1.1178 REMARK 3 S TENSOR REMARK 3 S11: -0.2459 S12: 0.0839 S13: -0.0904 REMARK 3 S21: -0.6239 S22: 0.1021 S23: 0.1396 REMARK 3 S31: -0.2693 S32: -0.1572 S33: 0.1154 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 32 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0131 -15.6678 -5.1633 REMARK 3 T TENSOR REMARK 3 T11: 0.3847 T22: 0.3096 REMARK 3 T33: 0.1443 T12: -0.0213 REMARK 3 T13: 0.0524 T23: -0.0407 REMARK 3 L TENSOR REMARK 3 L11: 1.9364 L22: 4.3929 REMARK 3 L33: 2.5680 L12: -0.7945 REMARK 3 L13: -0.5137 L23: 0.9350 REMARK 3 S TENSOR REMARK 3 S11: 0.1227 S12: 0.0085 S13: -0.0012 REMARK 3 S21: -0.3383 S22: -0.1121 S23: -0.0482 REMARK 3 S31: 0.0485 S32: -0.1152 S33: 0.0085 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 127 THROUGH 205 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2824 -1.1924 4.5976 REMARK 3 T TENSOR REMARK 3 T11: 0.3828 T22: 0.4088 REMARK 3 T33: 0.2463 T12: -0.0438 REMARK 3 T13: 0.1027 T23: -0.0862 REMARK 3 L TENSOR REMARK 3 L11: 0.9595 L22: 4.0758 REMARK 3 L33: 3.3193 L12: -0.8401 REMARK 3 L13: -0.9621 L23: 1.3841 REMARK 3 S TENSOR REMARK 3 S11: 0.1963 S12: -0.2347 S13: 0.3466 REMARK 3 S21: -0.0790 S22: 0.0747 S23: -0.1295 REMARK 3 S31: -0.4726 S32: 0.1766 S33: -0.2364 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 206 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3995 -19.7632 7.3766 REMARK 3 T TENSOR REMARK 3 T11: 0.5039 T22: 0.4874 REMARK 3 T33: 0.2823 T12: 0.0307 REMARK 3 T13: -0.0552 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 2.1994 L22: 3.8166 REMARK 3 L33: 2.8908 L12: -0.6733 REMARK 3 L13: -1.0198 L23: 1.2727 REMARK 3 S TENSOR REMARK 3 S11: -0.1047 S12: -0.5751 S13: -0.1141 REMARK 3 S21: 0.7882 S22: 0.1996 S23: -0.6389 REMARK 3 S31: 0.6102 S32: 0.5018 S33: -0.1045 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UT5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-APR-22. REMARK 100 THE DEPOSITION ID IS D_1000264810. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97919 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 133545 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 28.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3I65 REMARK 200 REMARK 200 REMARK: CUBIC REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.085 M HEPES PH7.5, 8.5% 2-PROPANOL, REMARK 280 17% PEG4000, 15% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.88500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 PRO A 173 REMARK 465 ASN A 174 REMARK 465 THR A 175 REMARK 465 LYS A 176 REMARK 465 ASN A 177 REMARK 465 LEU A 178 REMARK 465 ARG A 179 REMARK 465 SER A 180 REMARK 465 LEU A 181 REMARK 465 GLN A 182 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 THR B 38 REMARK 465 VAL B 39 REMARK 465 SER B 171 REMARK 465 SER B 172 REMARK 465 PRO B 173 REMARK 465 ASN B 174 REMARK 465 THR B 175 REMARK 465 LYS B 176 REMARK 465 ASN B 177 REMARK 465 LEU B 178 REMARK 465 ARG B 179 REMARK 465 SER B 180 REMARK 465 LEU B 181 REMARK 465 GLN B 182 REMARK 465 SER B 183 REMARK 465 GLY B 184 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 243 -169.89 -74.87 REMARK 500 TYR A 315 -76.63 -154.57 REMARK 500 LYS B 42 70.85 -154.84 REMARK 500 ASN B 243 -167.68 -74.82 REMARK 500 ASN B 253 46.27 -104.77 REMARK 500 TYR B 256 -4.17 67.32 REMARK 500 TYR B 315 -75.99 -153.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1413 DISTANCE = 6.08 ANGSTROMS DBREF 7UT5 A 1 334 UNP B7GZW7 PYRD_ACIB3 1 334 DBREF 7UT5 B 1 334 UNP B7GZW7 PYRD_ACIB3 1 334 SEQADV 7UT5 MET A -19 UNP B7GZW7 INITIATING METHIONINE SEQADV 7UT5 GLY A -18 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER A -17 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER A -16 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS A -15 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS A -14 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS A -13 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS A -12 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS A -11 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS A -10 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER A -9 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER A -8 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 GLY A -7 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 LEU A -6 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 VAL A -5 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 PRO A -4 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 ARG A -3 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 GLY A -2 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER A -1 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS A 0 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 MET B -19 UNP B7GZW7 INITIATING METHIONINE SEQADV 7UT5 GLY B -18 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER B -17 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER B -16 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS B -15 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS B -14 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS B -13 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS B -12 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS B -11 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS B -10 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER B -9 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER B -8 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 GLY B -7 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 LEU B -6 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 VAL B -5 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 PRO B -4 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 ARG B -3 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 GLY B -2 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 SER B -1 UNP B7GZW7 EXPRESSION TAG SEQADV 7UT5 HIS B 0 UNP B7GZW7 EXPRESSION TAG SEQRES 1 A 354 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 354 LEU VAL PRO ARG GLY SER HIS MET LEU TYR SER LEU ALA SEQRES 3 A 354 ARG PRO MET LEU PHE SER LEU ALA PRO GLU ARG ALA HIS SEQRES 4 A 354 GLU LEU THR LEU SER MET LEU ASP LYS ALA HIS LYS LEU SEQRES 5 A 354 GLY MET MET ARG GLN THR VAL GLU ALA LYS PRO THR THR SEQRES 6 A 354 CYS MET GLY ILE GLU PHE PRO ASN PRO VAL GLY LEU ALA SEQRES 7 A 354 ALA GLY LEU ASP LYS ASN GLY ALA HIS ILE ASP ALA LEU SEQRES 8 A 354 ALA GLY LEU GLY PHE GLY PHE ILE GLU ILE GLY THR ILE SEQRES 9 A 354 THR PRO ARG PRO GLN SER GLY ASN PRO LYS PRO ARG LEU SEQRES 10 A 354 PHE ARG ILE PRO GLU ALA LYS ALA ILE ILE ASN ARG MET SEQRES 11 A 354 GLY PHE ASN ASN ASP GLY VAL ASP LYS LEU ILE GLU ASN SEQRES 12 A 354 VAL LYS ALA SER LYS PHE ARG GLY ILE LEU GLY ILE ASN SEQRES 13 A 354 ILE GLY LYS ASN ALA ASP THR PRO VAL GLU LYS ALA VAL SEQRES 14 A 354 ASP ASP TYR LEU ILE CYS LEU GLU LYS VAL TYR ASN TYR SEQRES 15 A 354 ALA SER TYR ILE THR VAL ASN ILE SER SER PRO ASN THR SEQRES 16 A 354 LYS ASN LEU ARG SER LEU GLN SER GLY ASP ALA LEU THR SEQRES 17 A 354 GLU LEU LEU GLN THR LEU LYS ALA ARG GLN LEU GLU LEU SEQRES 18 A 354 ALA GLU GLN TYR ASN HIS TYR VAL PRO LEU VAL LEU LYS SEQRES 19 A 354 VAL ALA PRO ASP LEU THR ALA GLU ASP VAL GLU PHE ILE SEQRES 20 A 354 SER ALA GLN LEU LEU ASP PHE LYS ILE ASP GLY LEU ILE SEQRES 21 A 354 VAL THR ASN THR THR LEU SER ARG GLU GLY VAL GLU ASN SEQRES 22 A 354 LEU PRO TYR GLY ASN GLU SER GLY GLY LEU SER GLY ALA SEQRES 23 A 354 PRO VAL PHE GLU LYS SER THR GLU CYS LEU ARG LEU PHE SEQRES 24 A 354 ALA GLN THR LEU LYS GLY GLN ILE PRO LEU ILE GLY VAL SEQRES 25 A 354 GLY GLY ILE LEU SER GLY GLU GLN ALA ALA ALA LYS GLN SEQRES 26 A 354 GLN ALA GLY ALA THR LEU VAL GLN ILE TYR SER GLY LEU SEQRES 27 A 354 ILE TYR THR GLY PRO THR LEU VAL LYS GLN CYS VAL GLU SEQRES 28 A 354 ALA MET THR SEQRES 1 B 354 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 354 LEU VAL PRO ARG GLY SER HIS MET LEU TYR SER LEU ALA SEQRES 3 B 354 ARG PRO MET LEU PHE SER LEU ALA PRO GLU ARG ALA HIS SEQRES 4 B 354 GLU LEU THR LEU SER MET LEU ASP LYS ALA HIS LYS LEU SEQRES 5 B 354 GLY MET MET ARG GLN THR VAL GLU ALA LYS PRO THR THR SEQRES 6 B 354 CYS MET GLY ILE GLU PHE PRO ASN PRO VAL GLY LEU ALA SEQRES 7 B 354 ALA GLY LEU ASP LYS ASN GLY ALA HIS ILE ASP ALA LEU SEQRES 8 B 354 ALA GLY LEU GLY PHE GLY PHE ILE GLU ILE GLY THR ILE SEQRES 9 B 354 THR PRO ARG PRO GLN SER GLY ASN PRO LYS PRO ARG LEU SEQRES 10 B 354 PHE ARG ILE PRO GLU ALA LYS ALA ILE ILE ASN ARG MET SEQRES 11 B 354 GLY PHE ASN ASN ASP GLY VAL ASP LYS LEU ILE GLU ASN SEQRES 12 B 354 VAL LYS ALA SER LYS PHE ARG GLY ILE LEU GLY ILE ASN SEQRES 13 B 354 ILE GLY LYS ASN ALA ASP THR PRO VAL GLU LYS ALA VAL SEQRES 14 B 354 ASP ASP TYR LEU ILE CYS LEU GLU LYS VAL TYR ASN TYR SEQRES 15 B 354 ALA SER TYR ILE THR VAL ASN ILE SER SER PRO ASN THR SEQRES 16 B 354 LYS ASN LEU ARG SER LEU GLN SER GLY ASP ALA LEU THR SEQRES 17 B 354 GLU LEU LEU GLN THR LEU LYS ALA ARG GLN LEU GLU LEU SEQRES 18 B 354 ALA GLU GLN TYR ASN HIS TYR VAL PRO LEU VAL LEU LYS SEQRES 19 B 354 VAL ALA PRO ASP LEU THR ALA GLU ASP VAL GLU PHE ILE SEQRES 20 B 354 SER ALA GLN LEU LEU ASP PHE LYS ILE ASP GLY LEU ILE SEQRES 21 B 354 VAL THR ASN THR THR LEU SER ARG GLU GLY VAL GLU ASN SEQRES 22 B 354 LEU PRO TYR GLY ASN GLU SER GLY GLY LEU SER GLY ALA SEQRES 23 B 354 PRO VAL PHE GLU LYS SER THR GLU CYS LEU ARG LEU PHE SEQRES 24 B 354 ALA GLN THR LEU LYS GLY GLN ILE PRO LEU ILE GLY VAL SEQRES 25 B 354 GLY GLY ILE LEU SER GLY GLU GLN ALA ALA ALA LYS GLN SEQRES 26 B 354 GLN ALA GLY ALA THR LEU VAL GLN ILE TYR SER GLY LEU SEQRES 27 B 354 ILE TYR THR GLY PRO THR LEU VAL LYS GLN CYS VAL GLU SEQRES 28 B 354 ALA MET THR HET OBR A1001 34 HET FMN A1002 50 HET ORO A1003 11 HET GOL A1004 14 HET GOL A1005 14 HET GOL A1006 14 HET OBR B1001 34 HET FMN B1002 50 HET ORO B1003 11 HETNAM OBR (4R)-7-METHYL-N-[4-(PENTAFLUORO-LAMBDA~6~-SULFANYL) HETNAM 2 OBR PHENYL]IMIDAZO[1,2-A]PYRIMIDIN-5-AMINE HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM ORO OROTIC ACID HETNAM GOL GLYCEROL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 OBR 2(C13 H11 F5 N4 S) FORMUL 4 FMN 2(C17 H21 N4 O9 P) FORMUL 5 ORO 2(C5 H4 N2 O4) FORMUL 6 GOL 3(C3 H8 O3) FORMUL 12 HOH *413(H2 O) HELIX 1 AA1 MET A 1 SER A 12 1 12 HELIX 2 AA2 ALA A 14 LEU A 32 1 19 HELIX 3 AA3 HIS A 67 GLY A 73 1 7 HELIX 4 AA4 PRO A 101 ALA A 103 5 3 HELIX 5 AA5 GLY A 116 SER A 127 1 12 HELIX 6 AA6 PRO A 144 GLU A 146 5 3 HELIX 7 AA7 LYS A 147 TYR A 160 1 14 HELIX 8 AA8 ASN A 161 ALA A 163 5 3 HELIX 9 AA9 GLY A 184 ASN A 206 1 23 HELIX 10 AB1 THR A 220 PHE A 234 1 15 HELIX 11 AB2 VAL A 268 LYS A 284 1 17 HELIX 12 AB3 SER A 297 ALA A 307 1 11 HELIX 13 AB4 TYR A 315 THR A 321 1 7 HELIX 14 AB5 PRO A 323 MET A 333 1 11 HELIX 15 AB6 SER B -1 PHE B 11 1 13 HELIX 16 AB7 ALA B 14 LEU B 32 1 19 HELIX 17 AB8 HIS B 67 GLY B 73 1 7 HELIX 18 AB9 PRO B 101 ALA B 103 5 3 HELIX 19 AC1 GLY B 116 SER B 127 1 12 HELIX 20 AC2 PRO B 144 GLU B 146 5 3 HELIX 21 AC3 LYS B 147 TYR B 160 1 14 HELIX 22 AC4 ASN B 161 ALA B 163 5 3 HELIX 23 AC5 ALA B 186 ASN B 206 1 21 HELIX 24 AC6 THR B 220 PHE B 234 1 15 HELIX 25 AC7 VAL B 268 LYS B 284 1 17 HELIX 26 AC8 SER B 297 ALA B 307 1 11 HELIX 27 AC9 TYR B 315 THR B 321 1 7 HELIX 28 AD1 THR B 324 MET B 333 1 10 SHEET 1 AA1 2 THR A 44 CYS A 46 0 SHEET 2 AA1 2 ILE A 49 PHE A 51 -1 O PHE A 51 N THR A 44 SHEET 1 AA2 9 VAL A 55 LEU A 57 0 SHEET 2 AA2 9 PHE A 78 ILE A 84 1 O GLU A 80 N LEU A 57 SHEET 3 AA2 9 LEU A 133 ILE A 137 1 O GLY A 134 N ILE A 79 SHEET 4 AA2 9 TYR A 165 ASN A 169 1 O THR A 167 N ILE A 137 SHEET 5 AA2 9 LEU A 211 VAL A 215 1 O VAL A 212 N ILE A 166 SHEET 6 AA2 9 GLY A 238 VAL A 241 1 O ILE A 240 N LEU A 213 SHEET 7 AA2 9 LEU A 289 VAL A 292 1 O ILE A 290 N LEU A 239 SHEET 8 AA2 9 LEU A 311 ILE A 314 1 O LEU A 311 N GLY A 291 SHEET 9 AA2 9 VAL A 55 LEU A 57 1 N GLY A 56 O VAL A 312 SHEET 1 AA3 3 LEU A 97 ILE A 100 0 SHEET 2 AA3 3 ALA A 105 ASN A 108 -1 O ILE A 107 N PHE A 98 SHEET 3 AA3 3 GLY A 262 GLY A 265 -1 O GLY A 262 N ASN A 108 SHEET 1 AA4 2 ARG B -3 GLY B -2 0 SHEET 2 AA4 2 MET B 35 ARG B 36 1 O ARG B 36 N ARG B -3 SHEET 1 AA5 2 THR B 44 CYS B 46 0 SHEET 2 AA5 2 ILE B 49 PHE B 51 -1 O PHE B 51 N THR B 44 SHEET 1 AA6 9 VAL B 55 LEU B 57 0 SHEET 2 AA6 9 PHE B 78 ILE B 84 1 O PHE B 78 N LEU B 57 SHEET 3 AA6 9 ILE B 132 ILE B 137 1 O GLY B 134 N ILE B 79 SHEET 4 AA6 9 TYR B 165 ASN B 169 1 O THR B 167 N ILE B 137 SHEET 5 AA6 9 LEU B 211 VAL B 215 1 O VAL B 212 N ILE B 166 SHEET 6 AA6 9 GLY B 238 VAL B 241 1 O ILE B 240 N LEU B 213 SHEET 7 AA6 9 LEU B 289 VAL B 292 1 O ILE B 290 N VAL B 241 SHEET 8 AA6 9 LEU B 311 ILE B 314 1 O LEU B 311 N GLY B 291 SHEET 9 AA6 9 VAL B 55 LEU B 57 1 N GLY B 56 O VAL B 312 SHEET 1 AA7 3 LEU B 97 ILE B 100 0 SHEET 2 AA7 3 ALA B 105 ASN B 108 -1 O ILE B 107 N PHE B 98 SHEET 3 AA7 3 GLY B 262 GLY B 265 -1 O GLY B 262 N ASN B 108 CISPEP 1 GLY A 82 THR A 83 0 3.50 CISPEP 2 LYS A 94 PRO A 95 0 -2.67 CISPEP 3 VAL A 241 THR A 242 0 11.75 CISPEP 4 GLY B 82 THR B 83 0 1.97 CISPEP 5 LYS B 94 PRO B 95 0 -2.10 CISPEP 6 VAL B 241 THR B 242 0 11.79 CRYST1 45.530 89.770 84.417 90.00 90.04 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021964 0.000000 0.000014 0.00000 SCALE2 0.000000 0.011140 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011846 0.00000