HEADER VIRAL PROTEIN 28-APR-22 7UUH TITLE THE CRYSTAL STRUCTURE OF WILD TYPE PA ENDONUCLEASE TITLE 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH COMPOUND SJ001034732-2 (CIS- TITLE 3 FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/LUXEMBOURG/43/2009(H1N1)); SOURCE 3 ORGANISM_TAXID: 655278; SOURCE 4 STRAIN: A/LUXEMBOURG/43/2009(H1N1); SOURCE 5 GENE: PA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE, INFLUENZA, INHIBITOR RESISTANCE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,J.P.SLAVISH,Z.RANKOVIC,S.W.WHITE REVDAT 3 25-OCT-23 7UUH 1 REMARK REVDAT 2 29-MAR-23 7UUH 1 JRNL REVDAT 1 02-NOV-22 7UUH 0 JRNL AUTH P.J.SLAVISH,M.G.CUYPERS,M.A.RIMMER,A.ABDOLVAHABI,T.JEEVAN, JRNL AUTH 2 G.KUMAR,J.A.JARUSIEWICZ,S.VAITHIYALINGAM,J.C.JONES, JRNL AUTH 3 J.J.BOWLING,J.E.PRICE,R.M.DUBOIS,J.MIN,R.J.WEBBY,Z.RANKOVIC, JRNL AUTH 4 S.W.WHITE JRNL TITL CHEMICAL SCAFFOLD RECYCLING: STRUCTURE-GUIDED CONVERSION OF JRNL TITL 2 AN HIV INTEGRASE INHIBITOR INTO A POTENT INFLUENZA VIRUS JRNL TITL 3 RNA-DEPENDENT RNA POLYMERASE INHIBITOR DESIGNED TO MINIMIZE JRNL TITL 4 RESISTANCE POTENTIAL. JRNL REF EUR.J.MED.CHEM. V. 247 15035 2023 JRNL REFN ISSN 0223-5234 JRNL PMID 36603507 JRNL DOI 10.1016/J.EJMECH.2022.115035 REMARK 2 REMARK 2 RESOLUTION. 2.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 6496 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.730 REMARK 3 FREE R VALUE TEST SET COUNT : 307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9500 - 3.6400 0.97 3155 141 0.2322 0.2534 REMARK 3 2 3.6400 - 2.8900 0.98 3034 166 0.3080 0.3708 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.357 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.829 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 95.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1530 REMARK 3 ANGLE : 0.665 2072 REMARK 3 CHIRALITY : 0.045 218 REMARK 3 PLANARITY : 0.004 262 REMARK 3 DIHEDRAL : 20.109 544 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -4 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0480 -16.6744 2.3066 REMARK 3 T TENSOR REMARK 3 T11: 0.6123 T22: 0.6779 REMARK 3 T33: 1.0080 T12: 0.1004 REMARK 3 T13: 0.2277 T23: 0.2881 REMARK 3 L TENSOR REMARK 3 L11: 7.1362 L22: 2.2550 REMARK 3 L33: 4.1732 L12: 0.1426 REMARK 3 L13: 5.3246 L23: -0.5717 REMARK 3 S TENSOR REMARK 3 S11: -0.7169 S12: -0.5936 S13: -1.2372 REMARK 3 S21: -0.9368 S22: 0.3543 S23: -0.3920 REMARK 3 S31: 0.4287 S32: 0.8455 S33: 0.4835 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7465 -1.4293 13.2339 REMARK 3 T TENSOR REMARK 3 T11: 0.6280 T22: 0.7931 REMARK 3 T33: 0.7175 T12: 0.0860 REMARK 3 T13: -0.1727 T23: 0.3324 REMARK 3 L TENSOR REMARK 3 L11: 1.5176 L22: 3.0766 REMARK 3 L33: 5.8111 L12: 2.0300 REMARK 3 L13: 0.1079 L23: 0.3761 REMARK 3 S TENSOR REMARK 3 S11: -0.3789 S12: -0.6123 S13: -0.0509 REMARK 3 S21: 0.0274 S22: -0.5465 S23: -0.4683 REMARK 3 S31: -0.5216 S32: 1.0361 S33: 0.8732 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6840 5.1235 25.8807 REMARK 3 T TENSOR REMARK 3 T11: 0.7568 T22: 1.0439 REMARK 3 T33: 0.8325 T12: 0.1350 REMARK 3 T13: -0.3988 T23: 0.1434 REMARK 3 L TENSOR REMARK 3 L11: 6.5650 L22: 5.1899 REMARK 3 L33: 9.3202 L12: 0.2110 REMARK 3 L13: -1.6010 L23: 2.1048 REMARK 3 S TENSOR REMARK 3 S11: -0.2972 S12: -1.2331 S13: 0.6806 REMARK 3 S21: 0.7881 S22: 0.0873 S23: -0.9266 REMARK 3 S31: -0.0085 S32: 0.5519 S33: 0.1532 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9897 -7.2317 24.1227 REMARK 3 T TENSOR REMARK 3 T11: 0.9166 T22: 1.0171 REMARK 3 T33: 0.9232 T12: 0.2819 REMARK 3 T13: -0.5381 T23: 0.5673 REMARK 3 L TENSOR REMARK 3 L11: 1.5317 L22: 2.4836 REMARK 3 L33: 3.1344 L12: -0.4013 REMARK 3 L13: -0.3271 L23: 0.9328 REMARK 3 S TENSOR REMARK 3 S11: -0.2422 S12: -0.3675 S13: -0.1281 REMARK 3 S21: 0.4365 S22: 0.1795 S23: -0.3727 REMARK 3 S31: 0.5880 S32: 0.1911 S33: -0.3279 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0210 -10.4901 27.5916 REMARK 3 T TENSOR REMARK 3 T11: 0.9430 T22: 2.4214 REMARK 3 T33: 0.8852 T12: 0.6789 REMARK 3 T13: -0.1567 T23: 0.5385 REMARK 3 L TENSOR REMARK 3 L11: 1.9869 L22: 0.0188 REMARK 3 L33: 0.8430 L12: 0.1562 REMARK 3 L13: 0.1679 L23: 0.0887 REMARK 3 S TENSOR REMARK 3 S11: 0.1460 S12: 0.6651 S13: -0.0401 REMARK 3 S21: 0.0832 S22: -0.2571 S23: -0.5549 REMARK 3 S31: 0.0825 S32: 0.7219 S33: 0.0624 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8707 -12.7905 25.1357 REMARK 3 T TENSOR REMARK 3 T11: 0.7865 T22: 1.0085 REMARK 3 T33: 0.7834 T12: 0.1796 REMARK 3 T13: -0.0816 T23: 0.4943 REMARK 3 L TENSOR REMARK 3 L11: 3.0442 L22: 3.5330 REMARK 3 L33: 8.4425 L12: 0.8123 REMARK 3 L13: 3.1955 L23: 2.0563 REMARK 3 S TENSOR REMARK 3 S11: -0.1877 S12: -0.7099 S13: -0.3428 REMARK 3 S21: 0.9762 S22: -0.3344 S23: -0.6005 REMARK 3 S31: 0.6065 S32: 0.3223 S33: 0.1171 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.9736 -23.4105 12.1091 REMARK 3 T TENSOR REMARK 3 T11: 1.0447 T22: 0.9154 REMARK 3 T33: 1.4684 T12: 0.7395 REMARK 3 T13: 0.4341 T23: 0.5679 REMARK 3 L TENSOR REMARK 3 L11: 0.4634 L22: 2.3318 REMARK 3 L33: 0.1361 L12: 0.4024 REMARK 3 L13: 0.2265 L23: 0.4231 REMARK 3 S TENSOR REMARK 3 S11: -0.4723 S12: -0.4219 S13: -0.1451 REMARK 3 S21: 0.8809 S22: 0.3659 S23: -0.9827 REMARK 3 S31: 0.3022 S32: 0.2438 S33: -0.0458 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UUH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-22. REMARK 100 THE DEPOSITION ID IS D_1000264952. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6568 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.890 REMARK 200 RESOLUTION RANGE LOW (A) : 75.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.93000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5VPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.8, 1 M AMMONIUM REMARK 280 SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 45.49000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 45.49000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 67.36900 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 45.49000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 45.49000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 67.36900 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 45.49000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 45.49000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 67.36900 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 45.49000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 45.49000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 67.36900 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 45.49000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 45.49000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 67.36900 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 45.49000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 45.49000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 67.36900 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 45.49000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 45.49000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 67.36900 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 45.49000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 45.49000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 67.36900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 ARG A 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A -3 CG CD NE CZ NH1 NH2 REMARK 470 SER A -1 OG REMARK 470 GLN A 7 CD OE1 NE2 REMARK 470 LYS A 34 NZ REMARK 470 ARG A 75 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 ASN A 136 CG OD1 ND2 REMARK 470 LYS A 137 CD CE NZ REMARK 470 ILE A 138 CG1 CG2 CD1 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 LYS A 142 CG CD CE NZ REMARK 470 GLU A 153 CG CD OE1 OE2 REMARK 470 MET A 155 CG SD CE REMARK 470 ARG A 170 CZ NH1 NH2 REMARK 470 ILE A 178 CG1 CG2 CD1 REMARK 470 GLN A 193 CG CD OE1 NE2 REMARK 470 SER A 194 OG REMARK 470 GLU A 195 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 93 OG1 THR A 97 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A -3 -142.71 59.48 REMARK 500 HIS A 0 -24.22 68.32 REMARK 500 LYS A 34 -70.52 -49.49 REMARK 500 PHE A 35 -54.18 -27.92 REMARK 500 SER A 53 -104.21 -115.58 REMARK 500 LYS A 73 -50.31 -126.27 REMARK 500 PRO A 107 -156.85 -80.93 REMARK 500 ARG A 125 -137.72 -100.79 REMARK 500 SER A 140 90.01 -62.98 REMARK 500 THR A 162 -62.16 56.02 REMARK 500 ASP A 164 -124.12 -73.89 REMARK 500 GLU A 165 -36.60 -146.93 REMARK 500 GLN A 193 47.18 -102.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 QQ4 A 203 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 111.0 REMARK 620 3 GLU A 119 OE2 171.0 73.4 REMARK 620 4 ILE A 120 O 73.4 96.2 114.4 REMARK 620 5 NVR A 204 O5 72.6 176.0 103.3 83.0 REMARK 620 6 NVR A 204 O4 101.1 103.4 70.0 160.3 77.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE2 REMARK 620 2 ASP A 108 OD1 92.1 REMARK 620 3 NVR A 204 O1 99.6 163.0 REMARK 620 4 NVR A 204 O4 106.1 87.0 77.9 REMARK 620 5 HOH A 302 O 174.3 92.3 76.9 77.7 REMARK 620 N 1 2 3 4 DBREF 7UUH A 1 50 UNP C6H0Y9 C6H0Y9_9INFA 1 50 DBREF 7UUH A 73 196 UNP C6H0Y9 C6H0Y9_9INFA 73 196 SEQADV 7UUH MET A -19 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH GLY A -18 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH SER A -17 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH SER A -16 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH HIS A -15 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH HIS A -14 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH HIS A -13 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH HIS A -12 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH HIS A -11 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH HIS A -10 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH SER A -9 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH SER A -8 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH GLY A -7 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH LEU A -6 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH VAL A -5 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH PRO A -4 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH ARG A -3 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH GLY A -2 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH SER A -1 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH HIS A 0 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UUH GLY A 51 UNP C6H0Y9 LINKER SEQADV 7UUH GLY A 52 UNP C6H0Y9 LINKER SEQADV 7UUH SER A 53 UNP C6H0Y9 LINKER SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET GLU ASP PHE VAL ARG SEQRES 3 A 197 GLN CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS SEQRES 4 A 197 ALA MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR SEQRES 5 A 197 ASN LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS SEQRES 6 A 197 PHE MET TYR SER ASP GLY GLY SER LYS HIS ARG PHE GLU SEQRES 7 A 197 ILE ILE GLU GLY ARG ASP ARG ILE MET ALA TRP THR VAL SEQRES 8 A 197 VAL ASN SER ILE CYS ASN THR THR GLY VAL GLU LYS PRO SEQRES 9 A 197 LYS PHE LEU PRO ASP LEU TYR ASP TYR LYS GLU ASN ARG SEQRES 10 A 197 PHE ILE GLU ILE GLY VAL THR ARG ARG GLU VAL HIS ILE SEQRES 11 A 197 TYR TYR LEU GLU LYS ALA ASN LYS ILE LYS SER GLU LYS SEQRES 12 A 197 THR HIS ILE HIS ILE PHE SER PHE THR GLY GLU GLU MET SEQRES 13 A 197 ALA THR LYS ALA ASP TYR THR LEU ASP GLU GLU SER ARG SEQRES 14 A 197 ALA ARG ILE LYS THR ARG LEU PHE THR ILE ARG GLN GLU SEQRES 15 A 197 MET ALA SER ARG SER LEU TRP ASP SER PHE ARG GLN SER SEQRES 16 A 197 GLU ARG HET MN A 201 1 HET MN A 202 1 HET QQ4 A 203 41 HET NVR A 204 31 HET SO4 A 205 5 HET SO4 A 206 5 HETNAM MN MANGANESE (II) ION HETNAM QQ4 HEXA VINYLPYRROLIDONE K15 HETNAM NVR (1P,18Z)-5-HYDROXY-16,21-DIOXA-3,8,28- HETNAM 2 NVR TRIAZATETRACYCLO[20.3.1.1~2,6~.1~11,15~]OCTACOSA- HETNAM 3 NVR 1(26),2(28),5,11(27),12,14,18,22,24-NONAENE-4,7-DIONE HETNAM SO4 SULFATE ION HETSYN QQ4 1,1',1'',1''',1'''',1'''''-[(3R,5R,7R,9S,11R)-DODECANE- HETSYN 2 QQ4 1,3,5,7,9,11-HEXAYL]HEXA(PYRROLIDIN-2-ONE) HETSYN NVR SJ001034732-1 (CIS-FORM) FORMUL 2 MN 2(MN 2+) FORMUL 4 QQ4 C36 H56 N6 O6 FORMUL 5 NVR C23 H21 N3 O5 FORMUL 6 SO4 2(O4 S 2-) FORMUL 8 HOH *19(H2 O) HELIX 1 AA1 HIS A 0 PHE A 9 1 10 HELIX 2 AA2 ASN A 10 TYR A 24 1 15 HELIX 3 AA3 GLU A 31 GLY A 51 1 21 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 ILE A 138 1 13 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 GLU A 165 ARG A 185 1 21 HELIX 8 AA8 LEU A 187 GLN A 193 1 7 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 VAL A 122 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 PHE A 148 1 O HIS A 146 N GLY A 121 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 201 1555 1555 2.40 LINK OE2 GLU A 80 MN MN A 202 1555 1555 2.53 LINK OD2 ASP A 108 MN MN A 201 1555 1555 2.21 LINK OD1 ASP A 108 MN MN A 202 1555 1555 2.05 LINK OE2 GLU A 119 MN MN A 201 1555 1555 2.58 LINK O ILE A 120 MN MN A 201 1555 1555 2.04 LINK MN MN A 201 O5 NVR A 204 1555 1555 2.42 LINK MN MN A 201 O4 NVR A 204 1555 1555 2.02 LINK MN MN A 202 O1 NVR A 204 1555 1555 1.91 LINK MN MN A 202 O4 NVR A 204 1555 1555 2.38 LINK MN MN A 202 O HOH A 302 1555 1555 2.54 CRYST1 90.980 90.980 134.738 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010991 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010991 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007422 0.00000