data_7UUI # _entry.id 7UUI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.366 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7UUI pdb_00007uui 10.2210/pdb7uui/pdb WWPDB D_1000264951 ? ? EMDB EMD-26799 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 7UOO unspecified EMDB . EMD-26651 'other EM volume' PDB . 7UQZ unspecified EMDB . EMD-26703 'other EM volume' PDB . 7UQB unspecified EMDB . EMD-26686 'other EM volume' EMDB . EMD-26689 'other EM volume' EMDB 'Nucleoplasmic pre-60S intermediate of the Nog2 containing post-rotation state from a SPB1 D52A strain' EMD-26799 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7UUI _pdbx_database_status.recvd_initial_deposition_date 2022-04-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sekulski, K.' 1 0000-0002-6453-252X 'Cruz, V.E.' 2 0000-0001-5338-0973 'Weirich, C.S.' 3 0000-0002-9457-881X 'Erzberger, J.P.' 4 0000-0002-0266-8835 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 1207 _citation.page_last 1207 _citation.title 'rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-36867-5 _citation.pdbx_database_id_PubMed 36864048 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sekulski, K.' 1 0000-0002-6453-252X primary 'Cruz, V.E.' 2 0000-0001-5338-0973 primary 'Weirich, C.S.' 3 0000-0002-9457-881X primary 'Erzberger, J.P.' 4 0000-0002-0266-8835 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7UUI _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7UUI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Nucleolar GTP-binding protein 2' 55585.590 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 4 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGTGKKEKSRRIREGDTKDGNLRVKGENFYRDSKRVKFLNMYTSGKEIRNKKGNLIRAASFQDSTIPDARVQPDRRWFGN TRVISQDALQHFRSALGETQKDTYQVLLRRNKLPMSLLEEKDADESPKARILDTESYADAFGPKAQRKRPRLAASNLEDL VKATNEDITKYEEKQVLDATLGLMGNQEDKENGWTSAAKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCK SVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHTDRKQISVGF IGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVTHPEQYI PGVLKRCQVKHLERTYEISGWKDATEFIEILARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFVLPPEKEGEEKPKKK EVEKTA ; _entity_poly.pdbx_seq_one_letter_code_can ;MGTGKKEKSRRIREGDTKDGNLRVKGENFYRDSKRVKFLNMYTSGKEIRNKKGNLIRAASFQDSTIPDARVQPDRRWFGN TRVISQDALQHFRSALGETQKDTYQVLLRRNKLPMSLLEEKDADESPKARILDTESYADAFGPKAQRKRPRLAASNLEDL VKATNEDITKYEEKQVLDATLGLMGNQEDKENGWTSAAKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCK SVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHTDRKQISVGF IGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVTHPEQYI PGVLKRCQVKHLERTYEISGWKDATEFIEILARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFVLPPEKEGEEKPKKK EVEKTA ; _entity_poly.pdbx_strand_id m _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 THR n 1 4 GLY n 1 5 LYS n 1 6 LYS n 1 7 GLU n 1 8 LYS n 1 9 SER n 1 10 ARG n 1 11 ARG n 1 12 ILE n 1 13 ARG n 1 14 GLU n 1 15 GLY n 1 16 ASP n 1 17 THR n 1 18 LYS n 1 19 ASP n 1 20 GLY n 1 21 ASN n 1 22 LEU n 1 23 ARG n 1 24 VAL n 1 25 LYS n 1 26 GLY n 1 27 GLU n 1 28 ASN n 1 29 PHE n 1 30 TYR n 1 31 ARG n 1 32 ASP n 1 33 SER n 1 34 LYS n 1 35 ARG n 1 36 VAL n 1 37 LYS n 1 38 PHE n 1 39 LEU n 1 40 ASN n 1 41 MET n 1 42 TYR n 1 43 THR n 1 44 SER n 1 45 GLY n 1 46 LYS n 1 47 GLU n 1 48 ILE n 1 49 ARG n 1 50 ASN n 1 51 LYS n 1 52 LYS n 1 53 GLY n 1 54 ASN n 1 55 LEU n 1 56 ILE n 1 57 ARG n 1 58 ALA n 1 59 ALA n 1 60 SER n 1 61 PHE n 1 62 GLN n 1 63 ASP n 1 64 SER n 1 65 THR n 1 66 ILE n 1 67 PRO n 1 68 ASP n 1 69 ALA n 1 70 ARG n 1 71 VAL n 1 72 GLN n 1 73 PRO n 1 74 ASP n 1 75 ARG n 1 76 ARG n 1 77 TRP n 1 78 PHE n 1 79 GLY n 1 80 ASN n 1 81 THR n 1 82 ARG n 1 83 VAL n 1 84 ILE n 1 85 SER n 1 86 GLN n 1 87 ASP n 1 88 ALA n 1 89 LEU n 1 90 GLN n 1 91 HIS n 1 92 PHE n 1 93 ARG n 1 94 SER n 1 95 ALA n 1 96 LEU n 1 97 GLY n 1 98 GLU n 1 99 THR n 1 100 GLN n 1 101 LYS n 1 102 ASP n 1 103 THR n 1 104 TYR n 1 105 GLN n 1 106 VAL n 1 107 LEU n 1 108 LEU n 1 109 ARG n 1 110 ARG n 1 111 ASN n 1 112 LYS n 1 113 LEU n 1 114 PRO n 1 115 MET n 1 116 SER n 1 117 LEU n 1 118 LEU n 1 119 GLU n 1 120 GLU n 1 121 LYS n 1 122 ASP n 1 123 ALA n 1 124 ASP n 1 125 GLU n 1 126 SER n 1 127 PRO n 1 128 LYS n 1 129 ALA n 1 130 ARG n 1 131 ILE n 1 132 LEU n 1 133 ASP n 1 134 THR n 1 135 GLU n 1 136 SER n 1 137 TYR n 1 138 ALA n 1 139 ASP n 1 140 ALA n 1 141 PHE n 1 142 GLY n 1 143 PRO n 1 144 LYS n 1 145 ALA n 1 146 GLN n 1 147 ARG n 1 148 LYS n 1 149 ARG n 1 150 PRO n 1 151 ARG n 1 152 LEU n 1 153 ALA n 1 154 ALA n 1 155 SER n 1 156 ASN n 1 157 LEU n 1 158 GLU n 1 159 ASP n 1 160 LEU n 1 161 VAL n 1 162 LYS n 1 163 ALA n 1 164 THR n 1 165 ASN n 1 166 GLU n 1 167 ASP n 1 168 ILE n 1 169 THR n 1 170 LYS n 1 171 TYR n 1 172 GLU n 1 173 GLU n 1 174 LYS n 1 175 GLN n 1 176 VAL n 1 177 LEU n 1 178 ASP n 1 179 ALA n 1 180 THR n 1 181 LEU n 1 182 GLY n 1 183 LEU n 1 184 MET n 1 185 GLY n 1 186 ASN n 1 187 GLN n 1 188 GLU n 1 189 ASP n 1 190 LYS n 1 191 GLU n 1 192 ASN n 1 193 GLY n 1 194 TRP n 1 195 THR n 1 196 SER n 1 197 ALA n 1 198 ALA n 1 199 LYS n 1 200 GLU n 1 201 ALA n 1 202 ILE n 1 203 PHE n 1 204 SER n 1 205 LYS n 1 206 GLY n 1 207 GLN n 1 208 SER n 1 209 LYS n 1 210 ARG n 1 211 ILE n 1 212 TRP n 1 213 ASN n 1 214 GLU n 1 215 LEU n 1 216 TYR n 1 217 LYS n 1 218 VAL n 1 219 ILE n 1 220 ASP n 1 221 SER n 1 222 SER n 1 223 ASP n 1 224 VAL n 1 225 VAL n 1 226 ILE n 1 227 HIS n 1 228 VAL n 1 229 LEU n 1 230 ASP n 1 231 ALA n 1 232 ARG n 1 233 ASP n 1 234 PRO n 1 235 LEU n 1 236 GLY n 1 237 THR n 1 238 ARG n 1 239 CYS n 1 240 LYS n 1 241 SER n 1 242 VAL n 1 243 GLU n 1 244 GLU n 1 245 TYR n 1 246 MET n 1 247 LYS n 1 248 LYS n 1 249 GLU n 1 250 THR n 1 251 PRO n 1 252 HIS n 1 253 LYS n 1 254 HIS n 1 255 LEU n 1 256 ILE n 1 257 TYR n 1 258 VAL n 1 259 LEU n 1 260 ASN n 1 261 LYS n 1 262 CYS n 1 263 ASP n 1 264 LEU n 1 265 VAL n 1 266 PRO n 1 267 THR n 1 268 TRP n 1 269 VAL n 1 270 ALA n 1 271 ALA n 1 272 ALA n 1 273 TRP n 1 274 VAL n 1 275 LYS n 1 276 HIS n 1 277 LEU n 1 278 SER n 1 279 LYS n 1 280 GLU n 1 281 ARG n 1 282 PRO n 1 283 THR n 1 284 LEU n 1 285 ALA n 1 286 PHE n 1 287 HIS n 1 288 ALA n 1 289 SER n 1 290 ILE n 1 291 THR n 1 292 ASN n 1 293 SER n 1 294 PHE n 1 295 GLY n 1 296 LYS n 1 297 GLY n 1 298 SER n 1 299 LEU n 1 300 ILE n 1 301 GLN n 1 302 LEU n 1 303 LEU n 1 304 ARG n 1 305 GLN n 1 306 PHE n 1 307 SER n 1 308 GLN n 1 309 LEU n 1 310 HIS n 1 311 THR n 1 312 ASP n 1 313 ARG n 1 314 LYS n 1 315 GLN n 1 316 ILE n 1 317 SER n 1 318 VAL n 1 319 GLY n 1 320 PHE n 1 321 ILE n 1 322 GLY n 1 323 TYR n 1 324 PRO n 1 325 ASN n 1 326 THR n 1 327 GLY n 1 328 LYS n 1 329 SER n 1 330 SER n 1 331 ILE n 1 332 ILE n 1 333 ASN n 1 334 THR n 1 335 LEU n 1 336 ARG n 1 337 LYS n 1 338 LYS n 1 339 LYS n 1 340 VAL n 1 341 CYS n 1 342 GLN n 1 343 VAL n 1 344 ALA n 1 345 PRO n 1 346 ILE n 1 347 PRO n 1 348 GLY n 1 349 GLU n 1 350 THR n 1 351 LYS n 1 352 VAL n 1 353 TRP n 1 354 GLN n 1 355 TYR n 1 356 ILE n 1 357 THR n 1 358 LEU n 1 359 MET n 1 360 LYS n 1 361 ARG n 1 362 ILE n 1 363 PHE n 1 364 LEU n 1 365 ILE n 1 366 ASP n 1 367 CYS n 1 368 PRO n 1 369 GLY n 1 370 ILE n 1 371 VAL n 1 372 PRO n 1 373 PRO n 1 374 SER n 1 375 SER n 1 376 LYS n 1 377 ASP n 1 378 SER n 1 379 GLU n 1 380 GLU n 1 381 ASP n 1 382 ILE n 1 383 LEU n 1 384 PHE n 1 385 ARG n 1 386 GLY n 1 387 VAL n 1 388 VAL n 1 389 ARG n 1 390 VAL n 1 391 GLU n 1 392 HIS n 1 393 VAL n 1 394 THR n 1 395 HIS n 1 396 PRO n 1 397 GLU n 1 398 GLN n 1 399 TYR n 1 400 ILE n 1 401 PRO n 1 402 GLY n 1 403 VAL n 1 404 LEU n 1 405 LYS n 1 406 ARG n 1 407 CYS n 1 408 GLN n 1 409 VAL n 1 410 LYS n 1 411 HIS n 1 412 LEU n 1 413 GLU n 1 414 ARG n 1 415 THR n 1 416 TYR n 1 417 GLU n 1 418 ILE n 1 419 SER n 1 420 GLY n 1 421 TRP n 1 422 LYS n 1 423 ASP n 1 424 ALA n 1 425 THR n 1 426 GLU n 1 427 PHE n 1 428 ILE n 1 429 GLU n 1 430 ILE n 1 431 LEU n 1 432 ALA n 1 433 ARG n 1 434 LYS n 1 435 GLN n 1 436 GLY n 1 437 ARG n 1 438 LEU n 1 439 LEU n 1 440 LYS n 1 441 GLY n 1 442 GLY n 1 443 GLU n 1 444 PRO n 1 445 ASP n 1 446 GLU n 1 447 SER n 1 448 GLY n 1 449 VAL n 1 450 SER n 1 451 LYS n 1 452 GLN n 1 453 ILE n 1 454 LEU n 1 455 ASN n 1 456 ASP n 1 457 PHE n 1 458 ASN n 1 459 ARG n 1 460 GLY n 1 461 LYS n 1 462 ILE n 1 463 PRO n 1 464 TRP n 1 465 PHE n 1 466 VAL n 1 467 LEU n 1 468 PRO n 1 469 PRO n 1 470 GLU n 1 471 LYS n 1 472 GLU n 1 473 GLY n 1 474 GLU n 1 475 GLU n 1 476 LYS n 1 477 PRO n 1 478 LYS n 1 479 LYS n 1 480 LYS n 1 481 GLU n 1 482 VAL n 1 483 GLU n 1 484 LYS n 1 485 THR n 1 486 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 486 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Saccharomyces cerevisiae BY4741' _entity_src_nat.pdbx_ncbi_taxonomy_id 1247190 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NOG2_YEAST _struct_ref.pdbx_db_accession P53742 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGTGKKEKSRRIREGDTKDGNLRVKGENFYRDSKRVKFLNMYTSGKEIRNKKGNLIRAASFQDSTIPDARVQPDRRWFGN TRVISQDALQHFRSALGETQKDTYQVLLRRNKLPMSLLEEKDADESPKARILDTESYADAFGPKAQRKRPRLAASNLEDL VKATNEDITKYEEKQVLDATLGLMGNQEDKENGWTSAAKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCK SVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHTDRKQISVGF IGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVTHPEQYI PGVLKRCQVKHLERTYEISGWKDATEFIEILARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFVLPPEKEGEEKPKKK EVEKTA ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7UUI _struct_ref_seq.pdbx_strand_id m _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 486 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P53742 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 486 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 486 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7UUI _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 21.66 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7UUI _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0025 ? 3745 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.5038 ? 5049 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.0404 ? 550 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0036 ? 641 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 14.4214 ? 1448 ? f_dihedral_angle_d ? ? # _struct.entry_id 7UUI _struct.title 'Nucleoplasmic pre-60S intermediate of the Nog2 containing post-rotation state from a SPB1 D52A strain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7UUI _struct_keywords.text 'ribosome biogenesis, K-loop GTPase, GTPase, ribosome, 5S rRNP' _struct_keywords.pdbx_keywords RIBOSOME # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 2 ? LYS A 5 ? GLY m 2 LYS m 5 5 ? 4 HELX_P HELX_P2 AA2 LYS A 6 ? GLU A 14 ? LYS m 6 GLU m 14 1 ? 9 HELX_P HELX_P3 AA3 ASP A 32 ? ASN A 40 ? ASP m 32 ASN m 40 1 ? 9 HELX_P HELX_P4 AA4 MET A 41 ? SER A 44 ? MET m 41 SER m 44 5 ? 4 HELX_P HELX_P5 AA5 ASP A 74 ? GLY A 79 ? ASP m 74 GLY m 79 5 ? 6 HELX_P HELX_P6 AA6 SER A 85 ? ASP A 102 ? SER m 85 ASP m 102 1 ? 18 HELX_P HELX_P7 AA7 ARG A 109 ? LEU A 113 ? ARG m 109 LEU m 113 5 ? 5 HELX_P HELX_P8 AA8 PRO A 114 ? LEU A 118 ? PRO m 114 LEU m 118 5 ? 5 HELX_P HELX_P9 AA9 ARG A 130 ? GLU A 135 ? ARG m 130 GLU m 135 1 ? 6 HELX_P HELX_P10 AB1 SER A 136 ? PHE A 141 ? SER m 136 PHE m 141 1 ? 6 HELX_P HELX_P11 AB2 ASN A 156 ? THR A 180 ? ASN m 156 THR m 180 1 ? 25 HELX_P HELX_P12 AB3 GLY A 185 ? ASN A 192 ? GLY m 185 ASN m 192 1 ? 8 HELX_P HELX_P13 AB4 GLU A 200 ? LYS A 205 ? GLU m 200 LYS m 205 5 ? 6 HELX_P HELX_P14 AB5 SER A 208 ? SER A 222 ? SER m 208 SER m 222 1 ? 15 HELX_P HELX_P15 AB6 ASP A 233 ? ARG A 238 ? ASP m 233 ARG m 238 1 ? 6 HELX_P HELX_P16 AB7 CYS A 239 ? THR A 250 ? CYS m 239 THR m 250 1 ? 12 HELX_P HELX_P17 AB8 PRO A 266 ? SER A 278 ? PRO m 266 SER m 278 1 ? 13 HELX_P HELX_P18 AB9 GLY A 295 ? HIS A 310 ? GLY m 295 HIS m 310 1 ? 16 HELX_P HELX_P19 AC1 GLY A 327 ? LYS A 337 ? GLY m 327 LYS m 337 1 ? 11 HELX_P HELX_P20 AC2 SER A 378 ? ARG A 385 ? SER m 378 ARG m 385 1 ? 8 HELX_P HELX_P21 AC3 ARG A 389 ? VAL A 393 ? ARG m 389 VAL m 393 5 ? 5 HELX_P HELX_P22 AC4 PRO A 396 ? GLN A 398 ? PRO m 396 GLN m 398 5 ? 3 HELX_P HELX_P23 AC5 TYR A 399 ? LYS A 405 ? TYR m 399 LYS m 405 1 ? 7 HELX_P HELX_P24 AC6 GLN A 408 ? GLU A 417 ? GLN m 408 GLU m 417 1 ? 10 HELX_P HELX_P25 AC7 ASP A 423 ? GLY A 436 ? ASP m 423 GLY m 436 1 ? 14 HELX_P HELX_P26 AC8 ASP A 445 ? ARG A 459 ? ASP m 445 ARG m 459 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASN 325 OD1 ? ? ? 1_555 C K . K ? ? m ASN 325 m K 502 1_555 ? ? ? ? ? ? ? 2.807 ? ? metalc2 metalc ? ? A SER 329 OG ? ? ? 1_555 B MG . MG ? ? m SER 329 m MG 501 1_555 ? ? ? ? ? ? ? 2.147 ? ? metalc3 metalc ? ? A ALA 344 O ? ? ? 1_555 C K . K ? ? m ALA 344 m K 502 1_555 ? ? ? ? ? ? ? 2.799 ? ? metalc4 metalc ? ? A ILE 346 O ? ? ? 1_555 C K . K ? ? m ILE 346 m K 502 1_555 ? ? ? ? ? ? ? 3.326 ? ? metalc5 metalc ? ? A THR 350 OG1 ? ? ? 1_555 B MG . MG ? ? m THR 350 m MG 501 1_555 ? ? ? ? ? ? ? 2.671 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 D GDP . O3B ? ? m MG 501 m GDP 503 1_555 ? ? ? ? ? ? ? 2.081 ? ? metalc7 metalc ? ? C K . K ? ? ? 1_555 D GDP . O1B ? ? m K 502 m GDP 503 1_555 ? ? ? ? ? ? ? 2.778 ? ? metalc8 metalc ? ? C K . K ? ? ? 1_555 D GDP . O1A ? ? m K 502 m GDP 503 1_555 ? ? ? ? ? ? ? 3.225 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 283 ? ALA A 285 ? THR m 283 ALA m 285 AA1 2 HIS A 254 ? ASN A 260 ? HIS m 254 ASN m 260 AA1 3 VAL A 224 ? ASP A 230 ? VAL m 224 ASP m 230 AA1 4 ILE A 316 ? GLY A 322 ? ILE m 316 GLY m 322 AA1 5 ILE A 362 ? ASP A 366 ? ILE m 362 ASP m 366 AA1 6 GLN A 354 ? THR A 357 ? GLN m 354 THR m 357 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 284 ? O LEU m 284 N LEU A 259 ? N LEU m 259 AA1 2 3 O HIS A 254 ? O HIS m 254 N VAL A 225 ? N VAL m 225 AA1 3 4 N ILE A 226 ? N ILE m 226 O GLY A 319 ? O GLY m 319 AA1 4 5 N VAL A 318 ? N VAL m 318 O PHE A 363 ? O PHE m 363 AA1 5 6 O LEU A 364 ? O LEU m 364 N ILE A 356 ? N ILE m 356 # _atom_sites.entry_id 7UUI _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C K MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? m . n A 1 2 GLY 2 2 2 GLY GLY m . n A 1 3 THR 3 3 3 THR THR m . n A 1 4 GLY 4 4 4 GLY GLY m . n A 1 5 LYS 5 5 5 LYS LYS m . n A 1 6 LYS 6 6 6 LYS LYS m . n A 1 7 GLU 7 7 7 GLU GLU m . n A 1 8 LYS 8 8 8 LYS LYS m . n A 1 9 SER 9 9 9 SER SER m . n A 1 10 ARG 10 10 10 ARG ARG m . n A 1 11 ARG 11 11 11 ARG ARG m . n A 1 12 ILE 12 12 12 ILE ILE m . n A 1 13 ARG 13 13 13 ARG ARG m . n A 1 14 GLU 14 14 14 GLU GLU m . n A 1 15 GLY 15 15 ? ? ? m . n A 1 16 ASP 16 16 ? ? ? m . n A 1 17 THR 17 17 ? ? ? m . n A 1 18 LYS 18 18 ? ? ? m . n A 1 19 ASP 19 19 ? ? ? m . n A 1 20 GLY 20 20 ? ? ? m . n A 1 21 ASN 21 21 ? ? ? m . n A 1 22 LEU 22 22 ? ? ? m . n A 1 23 ARG 23 23 ? ? ? m . n A 1 24 VAL 24 24 24 VAL VAL m . n A 1 25 LYS 25 25 25 LYS LYS m . n A 1 26 GLY 26 26 26 GLY GLY m . n A 1 27 GLU 27 27 27 GLU GLU m . n A 1 28 ASN 28 28 28 ASN ASN m . n A 1 29 PHE 29 29 29 PHE PHE m . n A 1 30 TYR 30 30 30 TYR TYR m . n A 1 31 ARG 31 31 31 ARG ARG m . n A 1 32 ASP 32 32 32 ASP ASP m . n A 1 33 SER 33 33 33 SER SER m . n A 1 34 LYS 34 34 34 LYS LYS m . n A 1 35 ARG 35 35 35 ARG ARG m . n A 1 36 VAL 36 36 36 VAL VAL m . n A 1 37 LYS 37 37 37 LYS LYS m . n A 1 38 PHE 38 38 38 PHE PHE m . n A 1 39 LEU 39 39 39 LEU LEU m . n A 1 40 ASN 40 40 40 ASN ASN m . n A 1 41 MET 41 41 41 MET MET m . n A 1 42 TYR 42 42 42 TYR TYR m . n A 1 43 THR 43 43 43 THR THR m . n A 1 44 SER 44 44 44 SER SER m . n A 1 45 GLY 45 45 45 GLY GLY m . n A 1 46 LYS 46 46 46 LYS LYS m . n A 1 47 GLU 47 47 47 GLU GLU m . n A 1 48 ILE 48 48 48 ILE ILE m . n A 1 49 ARG 49 49 49 ARG ARG m . n A 1 50 ASN 50 50 50 ASN ASN m . n A 1 51 LYS 51 51 51 LYS LYS m . n A 1 52 LYS 52 52 52 LYS LYS m . n A 1 53 GLY 53 53 53 GLY GLY m . n A 1 54 ASN 54 54 54 ASN ASN m . n A 1 55 LEU 55 55 55 LEU LEU m . n A 1 56 ILE 56 56 56 ILE ILE m . n A 1 57 ARG 57 57 57 ARG ARG m . n A 1 58 ALA 58 58 58 ALA ALA m . n A 1 59 ALA 59 59 59 ALA ALA m . n A 1 60 SER 60 60 60 SER SER m . n A 1 61 PHE 61 61 61 PHE PHE m . n A 1 62 GLN 62 62 62 GLN GLN m . n A 1 63 ASP 63 63 63 ASP ASP m . n A 1 64 SER 64 64 64 SER SER m . n A 1 65 THR 65 65 65 THR THR m . n A 1 66 ILE 66 66 66 ILE ILE m . n A 1 67 PRO 67 67 67 PRO PRO m . n A 1 68 ASP 68 68 68 ASP ASP m . n A 1 69 ALA 69 69 69 ALA ALA m . n A 1 70 ARG 70 70 70 ARG ARG m . n A 1 71 VAL 71 71 71 VAL VAL m . n A 1 72 GLN 72 72 72 GLN GLN m . n A 1 73 PRO 73 73 73 PRO PRO m . n A 1 74 ASP 74 74 74 ASP ASP m . n A 1 75 ARG 75 75 75 ARG ARG m . n A 1 76 ARG 76 76 76 ARG ARG m . n A 1 77 TRP 77 77 77 TRP TRP m . n A 1 78 PHE 78 78 78 PHE PHE m . n A 1 79 GLY 79 79 79 GLY GLY m . n A 1 80 ASN 80 80 80 ASN ASN m . n A 1 81 THR 81 81 81 THR THR m . n A 1 82 ARG 82 82 82 ARG ARG m . n A 1 83 VAL 83 83 83 VAL VAL m . n A 1 84 ILE 84 84 84 ILE ILE m . n A 1 85 SER 85 85 85 SER SER m . n A 1 86 GLN 86 86 86 GLN GLN m . n A 1 87 ASP 87 87 87 ASP ASP m . n A 1 88 ALA 88 88 88 ALA ALA m . n A 1 89 LEU 89 89 89 LEU LEU m . n A 1 90 GLN 90 90 90 GLN GLN m . n A 1 91 HIS 91 91 91 HIS HIS m . n A 1 92 PHE 92 92 92 PHE PHE m . n A 1 93 ARG 93 93 93 ARG ARG m . n A 1 94 SER 94 94 94 SER SER m . n A 1 95 ALA 95 95 95 ALA ALA m . n A 1 96 LEU 96 96 96 LEU LEU m . n A 1 97 GLY 97 97 97 GLY GLY m . n A 1 98 GLU 98 98 98 GLU GLU m . n A 1 99 THR 99 99 99 THR THR m . n A 1 100 GLN 100 100 100 GLN GLN m . n A 1 101 LYS 101 101 101 LYS LYS m . n A 1 102 ASP 102 102 102 ASP ASP m . n A 1 103 THR 103 103 103 THR THR m . n A 1 104 TYR 104 104 104 TYR TYR m . n A 1 105 GLN 105 105 105 GLN GLN m . n A 1 106 VAL 106 106 106 VAL VAL m . n A 1 107 LEU 107 107 107 LEU LEU m . n A 1 108 LEU 108 108 108 LEU LEU m . n A 1 109 ARG 109 109 109 ARG ARG m . n A 1 110 ARG 110 110 110 ARG ARG m . n A 1 111 ASN 111 111 111 ASN ASN m . n A 1 112 LYS 112 112 112 LYS LYS m . n A 1 113 LEU 113 113 113 LEU LEU m . n A 1 114 PRO 114 114 114 PRO PRO m . n A 1 115 MET 115 115 115 MET MET m . n A 1 116 SER 116 116 116 SER SER m . n A 1 117 LEU 117 117 117 LEU LEU m . n A 1 118 LEU 118 118 118 LEU LEU m . n A 1 119 GLU 119 119 ? ? ? m . n A 1 120 GLU 120 120 ? ? ? m . n A 1 121 LYS 121 121 ? ? ? m . n A 1 122 ASP 122 122 ? ? ? m . n A 1 123 ALA 123 123 ? ? ? m . n A 1 124 ASP 124 124 ? ? ? m . n A 1 125 GLU 125 125 ? ? ? m . n A 1 126 SER 126 126 ? ? ? m . n A 1 127 PRO 127 127 127 PRO PRO m . n A 1 128 LYS 128 128 128 LYS LYS m . n A 1 129 ALA 129 129 129 ALA ALA m . n A 1 130 ARG 130 130 130 ARG ARG m . n A 1 131 ILE 131 131 131 ILE ILE m . n A 1 132 LEU 132 132 132 LEU LEU m . n A 1 133 ASP 133 133 133 ASP ASP m . n A 1 134 THR 134 134 134 THR THR m . n A 1 135 GLU 135 135 135 GLU GLU m . n A 1 136 SER 136 136 136 SER SER m . n A 1 137 TYR 137 137 137 TYR TYR m . n A 1 138 ALA 138 138 138 ALA ALA m . n A 1 139 ASP 139 139 139 ASP ASP m . n A 1 140 ALA 140 140 140 ALA ALA m . n A 1 141 PHE 141 141 141 PHE PHE m . n A 1 142 GLY 142 142 142 GLY GLY m . n A 1 143 PRO 143 143 143 PRO PRO m . n A 1 144 LYS 144 144 144 LYS LYS m . n A 1 145 ALA 145 145 145 ALA ALA m . n A 1 146 GLN 146 146 146 GLN GLN m . n A 1 147 ARG 147 147 147 ARG ARG m . n A 1 148 LYS 148 148 148 LYS LYS m . n A 1 149 ARG 149 149 149 ARG ARG m . n A 1 150 PRO 150 150 150 PRO PRO m . n A 1 151 ARG 151 151 151 ARG ARG m . n A 1 152 LEU 152 152 152 LEU LEU m . n A 1 153 ALA 153 153 153 ALA ALA m . n A 1 154 ALA 154 154 154 ALA ALA m . n A 1 155 SER 155 155 155 SER SER m . n A 1 156 ASN 156 156 156 ASN ASN m . n A 1 157 LEU 157 157 157 LEU LEU m . n A 1 158 GLU 158 158 158 GLU GLU m . n A 1 159 ASP 159 159 159 ASP ASP m . n A 1 160 LEU 160 160 160 LEU LEU m . n A 1 161 VAL 161 161 161 VAL VAL m . n A 1 162 LYS 162 162 162 LYS LYS m . n A 1 163 ALA 163 163 163 ALA ALA m . n A 1 164 THR 164 164 164 THR THR m . n A 1 165 ASN 165 165 165 ASN ASN m . n A 1 166 GLU 166 166 166 GLU GLU m . n A 1 167 ASP 167 167 167 ASP ASP m . n A 1 168 ILE 168 168 168 ILE ILE m . n A 1 169 THR 169 169 169 THR THR m . n A 1 170 LYS 170 170 170 LYS LYS m . n A 1 171 TYR 171 171 171 TYR TYR m . n A 1 172 GLU 172 172 172 GLU GLU m . n A 1 173 GLU 173 173 173 GLU GLU m . n A 1 174 LYS 174 174 174 LYS LYS m . n A 1 175 GLN 175 175 175 GLN GLN m . n A 1 176 VAL 176 176 176 VAL VAL m . n A 1 177 LEU 177 177 177 LEU LEU m . n A 1 178 ASP 178 178 178 ASP ASP m . n A 1 179 ALA 179 179 179 ALA ALA m . n A 1 180 THR 180 180 180 THR THR m . n A 1 181 LEU 181 181 181 LEU LEU m . n A 1 182 GLY 182 182 182 GLY GLY m . n A 1 183 LEU 183 183 183 LEU LEU m . n A 1 184 MET 184 184 184 MET MET m . n A 1 185 GLY 185 185 185 GLY GLY m . n A 1 186 ASN 186 186 186 ASN ASN m . n A 1 187 GLN 187 187 187 GLN GLN m . n A 1 188 GLU 188 188 188 GLU GLU m . n A 1 189 ASP 189 189 189 ASP ASP m . n A 1 190 LYS 190 190 190 LYS LYS m . n A 1 191 GLU 191 191 191 GLU GLU m . n A 1 192 ASN 192 192 192 ASN ASN m . n A 1 193 GLY 193 193 193 GLY GLY m . n A 1 194 TRP 194 194 194 TRP TRP m . n A 1 195 THR 195 195 195 THR THR m . n A 1 196 SER 196 196 196 SER SER m . n A 1 197 ALA 197 197 197 ALA ALA m . n A 1 198 ALA 198 198 198 ALA ALA m . n A 1 199 LYS 199 199 199 LYS LYS m . n A 1 200 GLU 200 200 200 GLU GLU m . n A 1 201 ALA 201 201 201 ALA ALA m . n A 1 202 ILE 202 202 202 ILE ILE m . n A 1 203 PHE 203 203 203 PHE PHE m . n A 1 204 SER 204 204 204 SER SER m . n A 1 205 LYS 205 205 205 LYS LYS m . n A 1 206 GLY 206 206 206 GLY GLY m . n A 1 207 GLN 207 207 207 GLN GLN m . n A 1 208 SER 208 208 208 SER SER m . n A 1 209 LYS 209 209 209 LYS LYS m . n A 1 210 ARG 210 210 210 ARG ARG m . n A 1 211 ILE 211 211 211 ILE ILE m . n A 1 212 TRP 212 212 212 TRP TRP m . n A 1 213 ASN 213 213 213 ASN ASN m . n A 1 214 GLU 214 214 214 GLU GLU m . n A 1 215 LEU 215 215 215 LEU LEU m . n A 1 216 TYR 216 216 216 TYR TYR m . n A 1 217 LYS 217 217 217 LYS LYS m . n A 1 218 VAL 218 218 218 VAL VAL m . n A 1 219 ILE 219 219 219 ILE ILE m . n A 1 220 ASP 220 220 220 ASP ASP m . n A 1 221 SER 221 221 221 SER SER m . n A 1 222 SER 222 222 222 SER SER m . n A 1 223 ASP 223 223 223 ASP ASP m . n A 1 224 VAL 224 224 224 VAL VAL m . n A 1 225 VAL 225 225 225 VAL VAL m . n A 1 226 ILE 226 226 226 ILE ILE m . n A 1 227 HIS 227 227 227 HIS HIS m . n A 1 228 VAL 228 228 228 VAL VAL m . n A 1 229 LEU 229 229 229 LEU LEU m . n A 1 230 ASP 230 230 230 ASP ASP m . n A 1 231 ALA 231 231 231 ALA ALA m . n A 1 232 ARG 232 232 232 ARG ARG m . n A 1 233 ASP 233 233 233 ASP ASP m . n A 1 234 PRO 234 234 234 PRO PRO m . n A 1 235 LEU 235 235 235 LEU LEU m . n A 1 236 GLY 236 236 236 GLY GLY m . n A 1 237 THR 237 237 237 THR THR m . n A 1 238 ARG 238 238 238 ARG ARG m . n A 1 239 CYS 239 239 239 CYS CYS m . n A 1 240 LYS 240 240 240 LYS LYS m . n A 1 241 SER 241 241 241 SER SER m . n A 1 242 VAL 242 242 242 VAL VAL m . n A 1 243 GLU 243 243 243 GLU GLU m . n A 1 244 GLU 244 244 244 GLU GLU m . n A 1 245 TYR 245 245 245 TYR TYR m . n A 1 246 MET 246 246 246 MET MET m . n A 1 247 LYS 247 247 247 LYS LYS m . n A 1 248 LYS 248 248 248 LYS LYS m . n A 1 249 GLU 249 249 249 GLU GLU m . n A 1 250 THR 250 250 250 THR THR m . n A 1 251 PRO 251 251 251 PRO PRO m . n A 1 252 HIS 252 252 252 HIS HIS m . n A 1 253 LYS 253 253 253 LYS LYS m . n A 1 254 HIS 254 254 254 HIS HIS m . n A 1 255 LEU 255 255 255 LEU LEU m . n A 1 256 ILE 256 256 256 ILE ILE m . n A 1 257 TYR 257 257 257 TYR TYR m . n A 1 258 VAL 258 258 258 VAL VAL m . n A 1 259 LEU 259 259 259 LEU LEU m . n A 1 260 ASN 260 260 260 ASN ASN m . n A 1 261 LYS 261 261 261 LYS LYS m . n A 1 262 CYS 262 262 262 CYS CYS m . n A 1 263 ASP 263 263 263 ASP ASP m . n A 1 264 LEU 264 264 264 LEU LEU m . n A 1 265 VAL 265 265 265 VAL VAL m . n A 1 266 PRO 266 266 266 PRO PRO m . n A 1 267 THR 267 267 267 THR THR m . n A 1 268 TRP 268 268 268 TRP TRP m . n A 1 269 VAL 269 269 269 VAL VAL m . n A 1 270 ALA 270 270 270 ALA ALA m . n A 1 271 ALA 271 271 271 ALA ALA m . n A 1 272 ALA 272 272 272 ALA ALA m . n A 1 273 TRP 273 273 273 TRP TRP m . n A 1 274 VAL 274 274 274 VAL VAL m . n A 1 275 LYS 275 275 275 LYS LYS m . n A 1 276 HIS 276 276 276 HIS HIS m . n A 1 277 LEU 277 277 277 LEU LEU m . n A 1 278 SER 278 278 278 SER SER m . n A 1 279 LYS 279 279 279 LYS LYS m . n A 1 280 GLU 280 280 280 GLU GLU m . n A 1 281 ARG 281 281 281 ARG ARG m . n A 1 282 PRO 282 282 282 PRO PRO m . n A 1 283 THR 283 283 283 THR THR m . n A 1 284 LEU 284 284 284 LEU LEU m . n A 1 285 ALA 285 285 285 ALA ALA m . n A 1 286 PHE 286 286 286 PHE PHE m . n A 1 287 HIS 287 287 287 HIS HIS m . n A 1 288 ALA 288 288 288 ALA ALA m . n A 1 289 SER 289 289 289 SER SER m . n A 1 290 ILE 290 290 290 ILE ILE m . n A 1 291 THR 291 291 291 THR THR m . n A 1 292 ASN 292 292 292 ASN ASN m . n A 1 293 SER 293 293 293 SER SER m . n A 1 294 PHE 294 294 294 PHE PHE m . n A 1 295 GLY 295 295 295 GLY GLY m . n A 1 296 LYS 296 296 296 LYS LYS m . n A 1 297 GLY 297 297 297 GLY GLY m . n A 1 298 SER 298 298 298 SER SER m . n A 1 299 LEU 299 299 299 LEU LEU m . n A 1 300 ILE 300 300 300 ILE ILE m . n A 1 301 GLN 301 301 301 GLN GLN m . n A 1 302 LEU 302 302 302 LEU LEU m . n A 1 303 LEU 303 303 303 LEU LEU m . n A 1 304 ARG 304 304 304 ARG ARG m . n A 1 305 GLN 305 305 305 GLN GLN m . n A 1 306 PHE 306 306 306 PHE PHE m . n A 1 307 SER 307 307 307 SER SER m . n A 1 308 GLN 308 308 308 GLN GLN m . n A 1 309 LEU 309 309 309 LEU LEU m . n A 1 310 HIS 310 310 310 HIS HIS m . n A 1 311 THR 311 311 311 THR THR m . n A 1 312 ASP 312 312 312 ASP ASP m . n A 1 313 ARG 313 313 313 ARG ARG m . n A 1 314 LYS 314 314 314 LYS LYS m . n A 1 315 GLN 315 315 315 GLN GLN m . n A 1 316 ILE 316 316 316 ILE ILE m . n A 1 317 SER 317 317 317 SER SER m . n A 1 318 VAL 318 318 318 VAL VAL m . n A 1 319 GLY 319 319 319 GLY GLY m . n A 1 320 PHE 320 320 320 PHE PHE m . n A 1 321 ILE 321 321 321 ILE ILE m . n A 1 322 GLY 322 322 322 GLY GLY m . n A 1 323 TYR 323 323 323 TYR TYR m . n A 1 324 PRO 324 324 324 PRO PRO m . n A 1 325 ASN 325 325 325 ASN ASN m . n A 1 326 THR 326 326 326 THR THR m . n A 1 327 GLY 327 327 327 GLY GLY m . n A 1 328 LYS 328 328 328 LYS LYS m . n A 1 329 SER 329 329 329 SER SER m . n A 1 330 SER 330 330 330 SER SER m . n A 1 331 ILE 331 331 331 ILE ILE m . n A 1 332 ILE 332 332 332 ILE ILE m . n A 1 333 ASN 333 333 333 ASN ASN m . n A 1 334 THR 334 334 334 THR THR m . n A 1 335 LEU 335 335 335 LEU LEU m . n A 1 336 ARG 336 336 336 ARG ARG m . n A 1 337 LYS 337 337 337 LYS LYS m . n A 1 338 LYS 338 338 338 LYS LYS m . n A 1 339 LYS 339 339 339 LYS LYS m . n A 1 340 VAL 340 340 340 VAL VAL m . n A 1 341 CYS 341 341 341 CYS CYS m . n A 1 342 GLN 342 342 342 GLN GLN m . n A 1 343 VAL 343 343 343 VAL VAL m . n A 1 344 ALA 344 344 344 ALA ALA m . n A 1 345 PRO 345 345 345 PRO PRO m . n A 1 346 ILE 346 346 346 ILE ILE m . n A 1 347 PRO 347 347 347 PRO PRO m . n A 1 348 GLY 348 348 348 GLY GLY m . n A 1 349 GLU 349 349 349 GLU GLU m . n A 1 350 THR 350 350 350 THR THR m . n A 1 351 LYS 351 351 351 LYS LYS m . n A 1 352 VAL 352 352 352 VAL VAL m . n A 1 353 TRP 353 353 353 TRP TRP m . n A 1 354 GLN 354 354 354 GLN GLN m . n A 1 355 TYR 355 355 355 TYR TYR m . n A 1 356 ILE 356 356 356 ILE ILE m . n A 1 357 THR 357 357 357 THR THR m . n A 1 358 LEU 358 358 358 LEU LEU m . n A 1 359 MET 359 359 359 MET MET m . n A 1 360 LYS 360 360 360 LYS LYS m . n A 1 361 ARG 361 361 361 ARG ARG m . n A 1 362 ILE 362 362 362 ILE ILE m . n A 1 363 PHE 363 363 363 PHE PHE m . n A 1 364 LEU 364 364 364 LEU LEU m . n A 1 365 ILE 365 365 365 ILE ILE m . n A 1 366 ASP 366 366 366 ASP ASP m . n A 1 367 CYS 367 367 367 CYS CYS m . n A 1 368 PRO 368 368 368 PRO PRO m . n A 1 369 GLY 369 369 369 GLY GLY m . n A 1 370 ILE 370 370 370 ILE ILE m . n A 1 371 VAL 371 371 371 VAL VAL m . n A 1 372 PRO 372 372 372 PRO PRO m . n A 1 373 PRO 373 373 373 PRO PRO m . n A 1 374 SER 374 374 374 SER SER m . n A 1 375 SER 375 375 375 SER SER m . n A 1 376 LYS 376 376 376 LYS LYS m . n A 1 377 ASP 377 377 377 ASP ASP m . n A 1 378 SER 378 378 378 SER SER m . n A 1 379 GLU 379 379 379 GLU GLU m . n A 1 380 GLU 380 380 380 GLU GLU m . n A 1 381 ASP 381 381 381 ASP ASP m . n A 1 382 ILE 382 382 382 ILE ILE m . n A 1 383 LEU 383 383 383 LEU LEU m . n A 1 384 PHE 384 384 384 PHE PHE m . n A 1 385 ARG 385 385 385 ARG ARG m . n A 1 386 GLY 386 386 386 GLY GLY m . n A 1 387 VAL 387 387 387 VAL VAL m . n A 1 388 VAL 388 388 388 VAL VAL m . n A 1 389 ARG 389 389 389 ARG ARG m . n A 1 390 VAL 390 390 390 VAL VAL m . n A 1 391 GLU 391 391 391 GLU GLU m . n A 1 392 HIS 392 392 392 HIS HIS m . n A 1 393 VAL 393 393 393 VAL VAL m . n A 1 394 THR 394 394 394 THR THR m . n A 1 395 HIS 395 395 395 HIS HIS m . n A 1 396 PRO 396 396 396 PRO PRO m . n A 1 397 GLU 397 397 397 GLU GLU m . n A 1 398 GLN 398 398 398 GLN GLN m . n A 1 399 TYR 399 399 399 TYR TYR m . n A 1 400 ILE 400 400 400 ILE ILE m . n A 1 401 PRO 401 401 401 PRO PRO m . n A 1 402 GLY 402 402 402 GLY GLY m . n A 1 403 VAL 403 403 403 VAL VAL m . n A 1 404 LEU 404 404 404 LEU LEU m . n A 1 405 LYS 405 405 405 LYS LYS m . n A 1 406 ARG 406 406 406 ARG ARG m . n A 1 407 CYS 407 407 407 CYS CYS m . n A 1 408 GLN 408 408 408 GLN GLN m . n A 1 409 VAL 409 409 409 VAL VAL m . n A 1 410 LYS 410 410 410 LYS LYS m . n A 1 411 HIS 411 411 411 HIS HIS m . n A 1 412 LEU 412 412 412 LEU LEU m . n A 1 413 GLU 413 413 413 GLU GLU m . n A 1 414 ARG 414 414 414 ARG ARG m . n A 1 415 THR 415 415 415 THR THR m . n A 1 416 TYR 416 416 416 TYR TYR m . n A 1 417 GLU 417 417 417 GLU GLU m . n A 1 418 ILE 418 418 418 ILE ILE m . n A 1 419 SER 419 419 419 SER SER m . n A 1 420 GLY 420 420 420 GLY GLY m . n A 1 421 TRP 421 421 421 TRP TRP m . n A 1 422 LYS 422 422 422 LYS LYS m . n A 1 423 ASP 423 423 423 ASP ASP m . n A 1 424 ALA 424 424 424 ALA ALA m . n A 1 425 THR 425 425 425 THR THR m . n A 1 426 GLU 426 426 426 GLU GLU m . n A 1 427 PHE 427 427 427 PHE PHE m . n A 1 428 ILE 428 428 428 ILE ILE m . n A 1 429 GLU 429 429 429 GLU GLU m . n A 1 430 ILE 430 430 430 ILE ILE m . n A 1 431 LEU 431 431 431 LEU LEU m . n A 1 432 ALA 432 432 432 ALA ALA m . n A 1 433 ARG 433 433 433 ARG ARG m . n A 1 434 LYS 434 434 434 LYS LYS m . n A 1 435 GLN 435 435 435 GLN GLN m . n A 1 436 GLY 436 436 436 GLY GLY m . n A 1 437 ARG 437 437 437 ARG ARG m . n A 1 438 LEU 438 438 438 LEU LEU m . n A 1 439 LEU 439 439 439 LEU LEU m . n A 1 440 LYS 440 440 440 LYS LYS m . n A 1 441 GLY 441 441 441 GLY GLY m . n A 1 442 GLY 442 442 442 GLY GLY m . n A 1 443 GLU 443 443 443 GLU GLU m . n A 1 444 PRO 444 444 444 PRO PRO m . n A 1 445 ASP 445 445 445 ASP ASP m . n A 1 446 GLU 446 446 446 GLU GLU m . n A 1 447 SER 447 447 447 SER SER m . n A 1 448 GLY 448 448 448 GLY GLY m . n A 1 449 VAL 449 449 449 VAL VAL m . n A 1 450 SER 450 450 450 SER SER m . n A 1 451 LYS 451 451 451 LYS LYS m . n A 1 452 GLN 452 452 452 GLN GLN m . n A 1 453 ILE 453 453 453 ILE ILE m . n A 1 454 LEU 454 454 454 LEU LEU m . n A 1 455 ASN 455 455 455 ASN ASN m . n A 1 456 ASP 456 456 456 ASP ASP m . n A 1 457 PHE 457 457 457 PHE PHE m . n A 1 458 ASN 458 458 458 ASN ASN m . n A 1 459 ARG 459 459 459 ARG ARG m . n A 1 460 GLY 460 460 460 GLY GLY m . n A 1 461 LYS 461 461 461 LYS LYS m . n A 1 462 ILE 462 462 462 ILE ILE m . n A 1 463 PRO 463 463 463 PRO PRO m . n A 1 464 TRP 464 464 464 TRP TRP m . n A 1 465 PHE 465 465 465 PHE PHE m . n A 1 466 VAL 466 466 466 VAL VAL m . n A 1 467 LEU 467 467 467 LEU LEU m . n A 1 468 PRO 468 468 468 PRO PRO m . n A 1 469 PRO 469 469 469 PRO PRO m . n A 1 470 GLU 470 470 470 GLU GLU m . n A 1 471 LYS 471 471 ? ? ? m . n A 1 472 GLU 472 472 ? ? ? m . n A 1 473 GLY 473 473 ? ? ? m . n A 1 474 GLU 474 474 ? ? ? m . n A 1 475 GLU 475 475 ? ? ? m . n A 1 476 LYS 476 476 ? ? ? m . n A 1 477 PRO 477 477 ? ? ? m . n A 1 478 LYS 478 478 ? ? ? m . n A 1 479 LYS 479 479 ? ? ? m . n A 1 480 LYS 480 480 ? ? ? m . n A 1 481 GLU 481 481 ? ? ? m . n A 1 482 VAL 482 482 ? ? ? m . n A 1 483 GLU 483 483 ? ? ? m . n A 1 484 LYS 484 484 ? ? ? m . n A 1 485 THR 485 485 ? ? ? m . n A 1 486 ALA 486 486 ? ? ? m . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email jan.erzberger@utsouthwestern.edu _pdbx_contact_author.name_first Jan _pdbx_contact_author.name_last Erzberger _pdbx_contact_author.name_mi P _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0266-8835 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 501 503 MG MG m . C 3 K 1 502 506 K K m . D 4 GDP 1 503 601 GDP GDP m . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASN 325 ? m ASN 325 ? 1_555 K ? C K . ? m K 502 ? 1_555 O ? A ALA 344 ? m ALA 344 ? 1_555 73.7 ? 2 OD1 ? A ASN 325 ? m ASN 325 ? 1_555 K ? C K . ? m K 502 ? 1_555 O ? A ILE 346 ? m ILE 346 ? 1_555 75.5 ? 3 O ? A ALA 344 ? m ALA 344 ? 1_555 K ? C K . ? m K 502 ? 1_555 O ? A ILE 346 ? m ILE 346 ? 1_555 68.5 ? 4 OD1 ? A ASN 325 ? m ASN 325 ? 1_555 K ? C K . ? m K 502 ? 1_555 O1B ? D GDP . ? m GDP 503 ? 1_555 98.4 ? 5 O ? A ALA 344 ? m ALA 344 ? 1_555 K ? C K . ? m K 502 ? 1_555 O1B ? D GDP . ? m GDP 503 ? 1_555 133.1 ? 6 O ? A ILE 346 ? m ILE 346 ? 1_555 K ? C K . ? m K 502 ? 1_555 O1B ? D GDP . ? m GDP 503 ? 1_555 155.8 ? 7 OD1 ? A ASN 325 ? m ASN 325 ? 1_555 K ? C K . ? m K 502 ? 1_555 O1A ? D GDP . ? m GDP 503 ? 1_555 102.5 ? 8 O ? A ALA 344 ? m ALA 344 ? 1_555 K ? C K . ? m K 502 ? 1_555 O1A ? D GDP . ? m GDP 503 ? 1_555 73.3 ? 9 O ? A ILE 346 ? m ILE 346 ? 1_555 K ? C K . ? m K 502 ? 1_555 O1A ? D GDP . ? m GDP 503 ? 1_555 140.7 ? 10 O1B ? D GDP . ? m GDP 503 ? 1_555 K ? C K . ? m K 502 ? 1_555 O1A ? D GDP . ? m GDP 503 ? 1_555 63.3 ? 11 OG ? A SER 329 ? m SER 329 ? 1_555 MG ? B MG . ? m MG 501 ? 1_555 OG1 ? A THR 350 ? m THR 350 ? 1_555 91.8 ? 12 OG ? A SER 329 ? m SER 329 ? 1_555 MG ? B MG . ? m MG 501 ? 1_555 O3B ? D GDP . ? m GDP 503 ? 1_555 98.9 ? 13 OG1 ? A THR 350 ? m THR 350 ? 1_555 MG ? B MG . ? m MG 501 ? 1_555 O3B ? D GDP . ? m GDP 503 ? 1_555 169.3 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-03-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? 'Pavel Afonine' pafonine@lbl.gov ? ? ? ? Python/C++ https://www.phenix-online.org/ ? phenix.real_space_refine ? ? program 1.19.2_4158 1 ? refinement ? ? 'Paul D. Adams' pdadams@lbl.gov ? ? ? ? Python/C++ https://www.phenix-online.org/ ? PHENIX ? ? program 1.19.2_4158 2 # _pdbx_entry_details.entry_id 7UUI _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.entry_id 7UUI _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'RIGID BODY FIT' _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id m _em_3d_fitting_list.pdb_chain_residue_range 3-469 _em_3d_fitting_list.pdb_entry_id 6YLH # _em_3d_reconstruction.entry_id 7UUI _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 50091 _em_3d_reconstruction.resolution 2.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Map of the nucleolar post-rotation pre-60S intermediate purified with tags on Tif6 and Nog2 from a SPB1 D52A strain.' _em_entity_assembly.source NATURAL _em_entity_assembly.type RIBOSOME _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 7UUI _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 70 _em_imaging.calibrated_defocus_max 2200 _em_imaging.calibrated_defocus_min 900 _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 2200 _em_imaging.nominal_defocus_min 900 _em_imaging.nominal_magnification 81000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R2/1' _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.citation_id ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 277 _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 7UUI _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7UUI _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 m MET 1 ? A MET 1 2 1 Y 1 m GLY 15 ? A GLY 15 3 1 Y 1 m ASP 16 ? A ASP 16 4 1 Y 1 m THR 17 ? A THR 17 5 1 Y 1 m LYS 18 ? A LYS 18 6 1 Y 1 m ASP 19 ? A ASP 19 7 1 Y 1 m GLY 20 ? A GLY 20 8 1 Y 1 m ASN 21 ? A ASN 21 9 1 Y 1 m LEU 22 ? A LEU 22 10 1 Y 1 m ARG 23 ? A ARG 23 11 1 Y 1 m GLU 119 ? A GLU 119 12 1 Y 1 m GLU 120 ? A GLU 120 13 1 Y 1 m LYS 121 ? A LYS 121 14 1 Y 1 m ASP 122 ? A ASP 122 15 1 Y 1 m ALA 123 ? A ALA 123 16 1 Y 1 m ASP 124 ? A ASP 124 17 1 Y 1 m GLU 125 ? A GLU 125 18 1 Y 1 m SER 126 ? A SER 126 19 1 Y 1 m LYS 471 ? A LYS 471 20 1 Y 1 m GLU 472 ? A GLU 472 21 1 Y 1 m GLY 473 ? A GLY 473 22 1 Y 1 m GLU 474 ? A GLU 474 23 1 Y 1 m GLU 475 ? A GLU 475 24 1 Y 1 m LYS 476 ? A LYS 476 25 1 Y 1 m PRO 477 ? A PRO 477 26 1 Y 1 m LYS 478 ? A LYS 478 27 1 Y 1 m LYS 479 ? A LYS 479 28 1 Y 1 m LYS 480 ? A LYS 480 29 1 Y 1 m GLU 481 ? A GLU 481 30 1 Y 1 m VAL 482 ? A VAL 482 31 1 Y 1 m GLU 483 ? A GLU 483 32 1 Y 1 m LYS 484 ? A LYS 484 33 1 Y 1 m THR 485 ? A THR 485 34 1 Y 1 m ALA 486 ? A ALA 486 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 50 mM 'CH2[CH2NHC(CH2OH)3]2' Bis-Tris-Propane 1 2 125 mM NaCl 'Sodium Chloride' 1 3 25 mM KCl 'Potassium Chloride' 1 4 10 mM MgCl2 'Magnesium Chloride' 1 5 1 mM C9H15O6PHCl TCEP 1 6 0.01 '% (w/v)' ? NP-40 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 3.1 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 1247190 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Saccharomyces cerevisiae BY4741' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 1.4 _em_image_recording.average_exposure_time 0.05 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 5434 _em_image_recording.avg_electron_dose_per_subtomogram ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details ? _em_particle_selection.method ? _em_particle_selection.num_particles_selected 925065 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? Gctf ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'INITIAL EULER ASSIGNMENT' ? RELION ? 1 ? ? 10 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 CLASSIFICATION ? ? ? 1 ? ? 12 RECONSTRUCTION ? ? ? 1 ? ? 13 'MODEL REFINEMENT' ? ? ? ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 0.8 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM135617-01 1 'Cancer Prevention and Research Institute of Texas (CPRIT)' 'United States' RR150074 2 'Robert A. Welch Foundation' 'United States' I-1897 3 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 GDP ? ? GDP ? ? 'SUBJECT OF INVESTIGATION' ? 2 K ? ? K ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'POTASSIUM ION' K 4 "GUANOSINE-5'-DIPHOSPHATE" GDP # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6YLH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 #