HEADER OXIDOREDUCTASE 03-MAY-22 7UWT TITLE STRUCTURE OF OXYGEN-INSENSITIVE NAD(P)H-DEPENDENT NITROREDUCTASE TITLE 2 NFSB_VV F70A/F108Y (NTR 2.0) IN COMPLEX WITH FMN AT 1.85 ANGSTROMS TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROPTERIDINE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE; COMPND 5 EC: 1.5.1.34; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO VULNIFICUS; SOURCE 3 ORGANISM_TAXID: 672; SOURCE 4 GENE: FORC53_4366, JS85_12320; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NITROREDUCTASE, OXIDOREDUCTASE, FLAVOENZYME, METRONIDAZOLE REDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.V.SHARROCK,V.ARCUS,J.S.MUMM,D.F.ACKERLEY REVDAT 3 25-OCT-23 7UWT 1 REMARK REVDAT 2 26-APR-23 7UWT 1 JRNL REVDAT 1 18-MAY-22 7UWT 0 JRNL AUTH A.V.SHARROCK,J.S.MUMM,G.BAGDZIUNAS,N.CENAS,V.L.ARCUS, JRNL AUTH 2 D.F.ACKERLEY JRNL TITL THE CRYSTAL STRUCTURE OF ENGINEERED NITROREDUCTASE NTR 2.0 JRNL TITL 2 AND IMPACT OF F70A AND F108Y SUBSTITUTIONS ON SUBSTRATE JRNL TITL 3 SPECIFICITY. JRNL REF INT J MOL SCI V. 24 2023 JRNL REFN ESSN 1422-0067 JRNL PMID 37047605 JRNL DOI 10.3390/IJMS24076633 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 68.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 41147 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2177 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2999 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.2010 REMARK 3 BIN FREE R VALUE SET COUNT : 174 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3346 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 183 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.95000 REMARK 3 B22 (A**2) : -1.27000 REMARK 3 B33 (A**2) : -0.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.457 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3520 ; 0.012 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3233 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4750 ; 1.701 ; 1.658 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7463 ; 1.494 ; 1.590 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 432 ; 5.912 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 172 ;25.469 ;22.442 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 574 ;12.962 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;15.020 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 452 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3906 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 747 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1736 ; 1.712 ; 1.750 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1733 ; 1.659 ; 1.747 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2164 ; 2.289 ; 2.611 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2165 ; 2.289 ; 2.612 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1784 ; 2.934 ; 2.070 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1785 ; 2.933 ; 2.071 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2587 ; 4.343 ; 2.960 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4118 ; 5.245 ;20.683 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4119 ; 5.246 ;20.691 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7UWT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000265054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43344 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 68.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 14.70 REMARK 200 R MERGE FOR SHELL (I) : 0.79200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1DS7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE TRIHYDRATE PH 4.5, PEG REMARK 280 300, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.52000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.52000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.21500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 68.68000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.21500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 68.68000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.52000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.21500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 68.68000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.52000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.21500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 68.68000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 68.43000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -53.52000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -53.52000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 3 CD1 REMARK 470 GLU A 24 CD OE1 OE2 REMARK 470 GLU A 25 CG CD OE1 OE2 REMARK 470 LYS A 31 NZ REMARK 470 LYS A 104 CD CE NZ REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 LYS A 181 CE NZ REMARK 470 LYS A 202 CD CE NZ REMARK 470 GLU A 211 OE1 OE2 REMARK 470 LYS B 21 CD CE NZ REMARK 470 LYS B 31 NZ REMARK 470 GLU B 55 CG CD OE1 OE2 REMARK 470 ARG B 73 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 100 CD OE1 OE2 REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 GLU B 196 CG OE1 OE2 REMARK 470 GLU B 211 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 401 O HOH B 479 2.06 REMARK 500 CA MET B 1 O HOH B 401 2.07 REMARK 500 OG SER A 195 OD1 ASP A 197 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 41 26.11 48.35 REMARK 500 GLN A 44 55.82 39.70 REMARK 500 VAL B 41 27.06 49.37 REMARK 500 GLN B 44 55.63 37.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 P4K B 303 REMARK 610 P4K B 304 REMARK 610 P4K B 305 DBREF1 7UWT A 1 217 UNP A0A347SKZ6_VIBVL DBREF2 7UWT A A0A347SKZ6 1 217 DBREF1 7UWT B 1 217 UNP A0A347SKZ6_VIBVL DBREF2 7UWT B A0A347SKZ6 1 217 SEQADV 7UWT ALA A 70 UNP A0A347SKZ PHE 70 ENGINEERED MUTATION SEQADV 7UWT TYR A 108 UNP A0A347SKZ PHE 108 ENGINEERED MUTATION SEQADV 7UWT ALA B 70 UNP A0A347SKZ PHE 70 ENGINEERED MUTATION SEQADV 7UWT TYR B 108 UNP A0A347SKZ PHE 108 ENGINEERED MUTATION SEQRES 1 A 217 MET THR ILE VAL GLN ALA ALA GLN SER ARG TYR SER THR SEQRES 2 A 217 LYS ALA PHE ASP ALA SER ARG LYS LEU PRO GLU GLU LYS SEQRES 3 A 217 VAL ALA ALA VAL LYS GLU LEU ILE ARG MET SER ALA SER SEQRES 4 A 217 SER VAL ASN SER GLN PRO TRP HIS PHE ILE VAL ALA SER SEQRES 5 A 217 SER GLU GLU GLY LYS ALA ARG ILE ALA LYS ALA THR GLN SEQRES 6 A 217 GLY GLY PHE ALA ALA ASN GLU ARG LYS ILE LEU ASP ALA SEQRES 7 A 217 SER HIS VAL VAL VAL PHE CYS ALA LYS THR ALA ILE ASP SEQRES 8 A 217 GLU ALA TYR LEU LEU ASP LEU LEU GLU SER GLU ASP LYS SEQRES 9 A 217 ASP GLY ARG TYR ALA ASP VAL GLU ALA LYS ASN GLY MET SEQRES 10 A 217 HIS ALA GLY ARG SER PHE PHE VAL ASN MET HIS ARG PHE SEQRES 11 A 217 ASP LEU LYS ASP ALA HIS HIS TRP MET GLU LYS GLN VAL SEQRES 12 A 217 TYR LEU ASN VAL GLY THR LEU LEU LEU GLY ALA SER ALA SEQRES 13 A 217 MET GLU ILE ASP ALA VAL PRO ILE GLU GLY PHE ASP ALA SEQRES 14 A 217 LYS VAL LEU ASP GLU GLU PHE GLY LEU ARG GLU LYS GLY SEQRES 15 A 217 PHE THR SER VAL VAL ILE VAL PRO LEU GLY TYR HIS SER SEQRES 16 A 217 GLU ASP ASP PHE ASN ALA LYS LEU PRO LYS SER ARG TRP SEQRES 17 A 217 SER ALA GLU THR VAL PHE THR GLU ILE SEQRES 1 B 217 MET THR ILE VAL GLN ALA ALA GLN SER ARG TYR SER THR SEQRES 2 B 217 LYS ALA PHE ASP ALA SER ARG LYS LEU PRO GLU GLU LYS SEQRES 3 B 217 VAL ALA ALA VAL LYS GLU LEU ILE ARG MET SER ALA SER SEQRES 4 B 217 SER VAL ASN SER GLN PRO TRP HIS PHE ILE VAL ALA SER SEQRES 5 B 217 SER GLU GLU GLY LYS ALA ARG ILE ALA LYS ALA THR GLN SEQRES 6 B 217 GLY GLY PHE ALA ALA ASN GLU ARG LYS ILE LEU ASP ALA SEQRES 7 B 217 SER HIS VAL VAL VAL PHE CYS ALA LYS THR ALA ILE ASP SEQRES 8 B 217 GLU ALA TYR LEU LEU ASP LEU LEU GLU SER GLU ASP LYS SEQRES 9 B 217 ASP GLY ARG TYR ALA ASP VAL GLU ALA LYS ASN GLY MET SEQRES 10 B 217 HIS ALA GLY ARG SER PHE PHE VAL ASN MET HIS ARG PHE SEQRES 11 B 217 ASP LEU LYS ASP ALA HIS HIS TRP MET GLU LYS GLN VAL SEQRES 12 B 217 TYR LEU ASN VAL GLY THR LEU LEU LEU GLY ALA SER ALA SEQRES 13 B 217 MET GLU ILE ASP ALA VAL PRO ILE GLU GLY PHE ASP ALA SEQRES 14 B 217 LYS VAL LEU ASP GLU GLU PHE GLY LEU ARG GLU LYS GLY SEQRES 15 B 217 PHE THR SER VAL VAL ILE VAL PRO LEU GLY TYR HIS SER SEQRES 16 B 217 GLU ASP ASP PHE ASN ALA LYS LEU PRO LYS SER ARG TRP SEQRES 17 B 217 SER ALA GLU THR VAL PHE THR GLU ILE HET FMN A 301 31 HET ACT A 302 4 HET FMN B 301 31 HET ACT B 302 4 HET P4K B 303 14 HET P4K B 304 16 HET P4K B 305 8 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM ACT ACETATE ION HETNAM P4K POLYETHYLENE GLYCOL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN P4K 3,6,9,12,15,18,21,24,27,30,33,36,39,42- HETSYN 2 P4K TETRADECAOXATETRATETRACONTAN-1-OL FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 7 P4K 3(C30 H62 O15) FORMUL 10 HOH *183(H2 O) HELIX 1 AA1 THR A 2 ARG A 10 1 9 HELIX 2 AA2 PRO A 23 MET A 36 1 14 HELIX 3 AA3 SER A 39 SER A 43 5 5 HELIX 4 AA4 SER A 53 LYS A 62 1 10 HELIX 5 AA5 ALA A 63 THR A 64 5 2 HELIX 6 AA6 GLN A 65 ALA A 70 5 6 HELIX 7 AA7 ASN A 71 ALA A 78 1 8 HELIX 8 AA8 ASP A 91 ASP A 105 1 15 HELIX 9 AA9 ASP A 110 ASP A 131 1 22 HELIX 10 AB1 ASP A 134 MET A 157 1 24 HELIX 11 AB2 ASP A 168 PHE A 176 1 9 HELIX 12 AB3 LEU A 178 LYS A 181 5 4 HELIX 13 AB4 ASP A 198 LEU A 203 5 6 HELIX 14 AB5 SER A 209 PHE A 214 1 6 HELIX 15 AB6 THR B 2 ARG B 10 1 9 HELIX 16 AB7 PRO B 23 MET B 36 1 14 HELIX 17 AB8 SER B 39 SER B 43 5 5 HELIX 18 AB9 SER B 53 LYS B 62 1 10 HELIX 19 AC1 ALA B 63 THR B 64 5 2 HELIX 20 AC2 GLN B 65 ALA B 70 5 6 HELIX 21 AC3 ASN B 71 ALA B 78 1 8 HELIX 22 AC4 ASP B 91 ASP B 105 1 15 HELIX 23 AC5 ASP B 110 ASP B 131 1 22 HELIX 24 AC6 ASP B 134 MET B 157 1 24 HELIX 25 AC7 ASP B 168 GLY B 177 1 10 HELIX 26 AC8 LEU B 178 LYS B 181 5 4 HELIX 27 AC9 ASP B 198 LEU B 203 5 6 HELIX 28 AD1 SER B 209 PHE B 214 1 6 SHEET 1 AA1 4 TRP A 46 ALA A 51 0 SHEET 2 AA1 4 HIS A 80 LYS A 87 -1 O VAL A 83 N ILE A 49 SHEET 3 AA1 4 PHE A 183 GLY A 192 -1 O VAL A 187 N PHE A 84 SHEET 4 AA1 4 ASP A 160 ALA A 161 -1 N ASP A 160 O GLY A 192 SHEET 1 AA2 4 TRP B 46 ALA B 51 0 SHEET 2 AA2 4 HIS B 80 LYS B 87 -1 O VAL B 83 N ILE B 49 SHEET 3 AA2 4 PHE B 183 GLY B 192 -1 O VAL B 189 N VAL B 82 SHEET 4 AA2 4 ASP B 160 ALA B 161 -1 N ASP B 160 O GLY B 192 CRYST1 68.430 137.360 107.040 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014613 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009342 0.00000