HEADER LIGASE 06-MAY-22 7UYK TITLE STRUCTURE OF RNF31 IN COMPLEX WITH FP06655, A HELICON POLYPEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE RNF31; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HOIL-1-INTERACTING PROTEIN,HOIP,RING FINGER PROTEIN 31,RING- COMPND 5 TYPE E3 UBIQUITIN TRANSFERASE RNF31,ZINC IN-BETWEEN-RING-FINGER COMPND 6 UBIQUITIN-ASSOCIATED DOMAIN PROTEIN; COMPND 7 EC: 2.3.2.31; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: HELICON FP06655; COMPND 11 CHAIN: D, C; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: STAPLED PEPTIDE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RNF31, ZIBRA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS INHIBITOR, COMPLEX, STAPLED, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR S.AGARWAL,T.THOMSON,S.WAHL,W.WALKUP,T.OLSEN,G.VERDINE,J.MCGEE REVDAT 2 25-OCT-23 7UYK 1 REMARK REVDAT 1 28-DEC-22 7UYK 0 JRNL AUTH K.LI,O.S.TOKAREVA,T.M.THOMSON,S.C.T.WAHL,T.L.TRAVALINE, JRNL AUTH 2 J.D.RAMIREZ,S.K.CHOUDARY,S.AGARWAL,W.G.WALKUP 4TH,T.J.OLSEN, JRNL AUTH 3 M.J.BRENNAN,G.L.VERDINE,J.H.MCGEE JRNL TITL DE NOVO MAPPING OF ALPHA-HELIX RECOGNITION SITES ON PROTEIN JRNL TITL 2 SURFACES USING UNBIASED LIBRARIES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 35119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 36534810 JRNL DOI 10.1073/PNAS.2210435119 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4444 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 15579 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6100 - 4.6200 0.99 3028 151 0.1759 0.2209 REMARK 3 2 4.6200 - 3.6600 1.00 2995 120 0.1804 0.2106 REMARK 3 3 3.6600 - 3.2000 1.00 2965 154 0.2145 0.2863 REMARK 3 4 3.2000 - 2.9100 1.00 2963 108 0.2588 0.3250 REMARK 3 5 2.9100 - 2.7000 1.00 2943 152 0.2795 0.3177 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.303 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.023 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2533 REMARK 3 ANGLE : 0.701 3415 REMARK 3 CHIRALITY : 0.038 355 REMARK 3 PLANARITY : 0.005 461 REMARK 3 DIHEDRAL : 18.455 949 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 487 THROUGH 520 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.8529 -25.7542 10.9758 REMARK 3 T TENSOR REMARK 3 T11: 0.7458 T22: 0.7719 REMARK 3 T33: 0.8545 T12: -0.0842 REMARK 3 T13: 0.1763 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 9.8697 L22: 2.0651 REMARK 3 L33: 4.6788 L12: -4.1764 REMARK 3 L13: 2.6117 L23: -1.2009 REMARK 3 S TENSOR REMARK 3 S11: -0.2323 S12: -1.1820 S13: -0.0795 REMARK 3 S21: 0.5532 S22: 0.5683 S23: 1.2061 REMARK 3 S31: -0.2184 S32: -0.5303 S33: -0.4592 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 521 THROUGH 586 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5267 -34.6925 6.4054 REMARK 3 T TENSOR REMARK 3 T11: 0.4813 T22: 0.4416 REMARK 3 T33: 0.4415 T12: -0.0730 REMARK 3 T13: -0.0004 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 8.5529 L22: 3.9961 REMARK 3 L33: 3.2260 L12: -1.1164 REMARK 3 L13: -0.1555 L23: -0.8781 REMARK 3 S TENSOR REMARK 3 S11: 0.0968 S12: -0.5753 S13: -0.1545 REMARK 3 S21: 0.2667 S22: -0.0899 S23: -0.2904 REMARK 3 S31: 0.2360 S32: 0.3177 S33: 0.0471 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 587 THROUGH 626 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5276 -25.7781 10.9629 REMARK 3 T TENSOR REMARK 3 T11: 0.6357 T22: 1.0965 REMARK 3 T33: 0.7581 T12: -0.0664 REMARK 3 T13: -0.0138 T23: -0.0928 REMARK 3 L TENSOR REMARK 3 L11: 7.8048 L22: 3.9860 REMARK 3 L33: 0.2179 L12: 4.9270 REMARK 3 L13: 0.6464 L23: 0.1060 REMARK 3 S TENSOR REMARK 3 S11: 0.5657 S12: -1.1143 S13: 0.0784 REMARK 3 S21: 0.5165 S22: -0.2244 S23: -0.5999 REMARK 3 S31: -0.1520 S32: 0.2712 S33: -0.3879 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 489 THROUGH 501 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3046 -27.7871 -11.7737 REMARK 3 T TENSOR REMARK 3 T11: 1.0517 T22: 1.0916 REMARK 3 T33: 1.0747 T12: -0.0383 REMARK 3 T13: 0.5550 T23: 0.0395 REMARK 3 L TENSOR REMARK 3 L11: 5.7109 L22: 5.8612 REMARK 3 L33: 8.4079 L12: -2.8627 REMARK 3 L13: 5.2174 L23: 1.4127 REMARK 3 S TENSOR REMARK 3 S11: -0.7298 S12: 0.9446 S13: -1.3388 REMARK 3 S21: -0.4913 S22: 0.6123 S23: -0.0755 REMARK 3 S31: 0.6290 S32: 1.9014 S33: 0.2216 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 502 THROUGH 520 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.7597 -16.7322 -11.9699 REMARK 3 T TENSOR REMARK 3 T11: 0.8226 T22: 0.7724 REMARK 3 T33: 0.6477 T12: 0.0404 REMARK 3 T13: 0.2334 T23: 0.1228 REMARK 3 L TENSOR REMARK 3 L11: 8.6297 L22: 9.8116 REMARK 3 L33: 2.0180 L12: 1.4367 REMARK 3 L13: 0.6655 L23: 3.1883 REMARK 3 S TENSOR REMARK 3 S11: -0.0782 S12: 1.6348 S13: 1.1538 REMARK 3 S21: -1.3122 S22: 0.3982 S23: -0.3180 REMARK 3 S31: -1.0548 S32: 0.6307 S33: -0.3567 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 521 THROUGH 550 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.8173 -16.1021 6.0663 REMARK 3 T TENSOR REMARK 3 T11: 0.4854 T22: 0.4224 REMARK 3 T33: 0.4710 T12: 0.0592 REMARK 3 T13: 0.0428 T23: 0.0916 REMARK 3 L TENSOR REMARK 3 L11: 4.5893 L22: 3.4117 REMARK 3 L33: 9.9441 L12: 0.5452 REMARK 3 L13: 1.7145 L23: 1.0267 REMARK 3 S TENSOR REMARK 3 S11: 0.0093 S12: -0.1072 S13: -0.1862 REMARK 3 S21: -0.0612 S22: 0.0324 S23: -0.6077 REMARK 3 S31: 0.3770 S32: 0.9718 S33: -0.1364 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 551 THROUGH 564 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.5689 -14.0101 8.9279 REMARK 3 T TENSOR REMARK 3 T11: 0.4202 T22: 0.4662 REMARK 3 T33: 0.3763 T12: -0.0097 REMARK 3 T13: 0.0069 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 9.7044 L22: 9.3040 REMARK 3 L33: 7.0453 L12: 1.5089 REMARK 3 L13: 2.1876 L23: -1.4576 REMARK 3 S TENSOR REMARK 3 S11: 0.1275 S12: -0.6009 S13: 0.2635 REMARK 3 S21: 0.5489 S22: -0.1478 S23: 0.0019 REMARK 3 S31: -0.1541 S32: 0.0919 S33: 0.0313 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 565 THROUGH 586 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1053 -8.0036 19.2541 REMARK 3 T TENSOR REMARK 3 T11: 0.6447 T22: 0.5150 REMARK 3 T33: 0.5204 T12: -0.0433 REMARK 3 T13: -0.0123 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 5.5032 L22: 5.2943 REMARK 3 L33: 2.0211 L12: 0.6650 REMARK 3 L13: 1.5565 L23: -1.9116 REMARK 3 S TENSOR REMARK 3 S11: -0.1963 S12: -0.5990 S13: 0.3366 REMARK 3 S21: 0.7899 S22: -0.2184 S23: 0.0999 REMARK 3 S31: -1.2147 S32: -0.5288 S33: 0.3272 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 587 THROUGH 604 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7065 -16.8147 26.5651 REMARK 3 T TENSOR REMARK 3 T11: 0.6417 T22: 0.9370 REMARK 3 T33: 0.4576 T12: -0.0450 REMARK 3 T13: -0.0584 T23: 0.0836 REMARK 3 L TENSOR REMARK 3 L11: 8.4473 L22: 6.8838 REMARK 3 L33: 2.0227 L12: 0.4460 REMARK 3 L13: -0.5232 L23: -0.6148 REMARK 3 S TENSOR REMARK 3 S11: 0.2334 S12: -1.5453 S13: 0.0799 REMARK 3 S21: 1.0010 S22: -0.1459 S23: -0.2852 REMARK 3 S31: 0.4507 S32: 0.5159 S33: -0.0637 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 605 THROUGH 626 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8311 -25.0531 37.6305 REMARK 3 T TENSOR REMARK 3 T11: 0.9704 T22: 1.0985 REMARK 3 T33: 0.8515 T12: 0.2091 REMARK 3 T13: 0.0308 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 7.9724 L22: 2.0864 REMARK 3 L33: 2.0767 L12: -3.4897 REMARK 3 L13: 6.3643 L23: -7.4942 REMARK 3 S TENSOR REMARK 3 S11: -0.0074 S12: 0.6670 S13: -0.1123 REMARK 3 S21: -0.7176 S22: -0.7094 S23: -0.6867 REMARK 3 S31: 1.4243 S32: 1.1358 S33: 1.1368 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1582 -12.4768 -2.6923 REMARK 3 T TENSOR REMARK 3 T11: 0.4804 T22: 0.4412 REMARK 3 T33: 0.7579 T12: 0.1051 REMARK 3 T13: 0.0501 T23: 0.1825 REMARK 3 L TENSOR REMARK 3 L11: 2.0136 L22: 2.0533 REMARK 3 L33: 7.1511 L12: 9.7403 REMARK 3 L13: -2.0139 L23: -1.0315 REMARK 3 S TENSOR REMARK 3 S11: -0.0496 S12: 0.8792 S13: 1.0635 REMARK 3 S21: -0.0241 S22: 0.2548 S23: 0.4544 REMARK 3 S31: 0.1689 S32: 0.4307 S33: -0.1397 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.4651 -35.0340 5.8638 REMARK 3 T TENSOR REMARK 3 T11: 0.7011 T22: 0.4592 REMARK 3 T33: 0.4709 T12: -0.1717 REMARK 3 T13: 0.0323 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 8.3280 L22: 2.0609 REMARK 3 L33: 9.3805 L12: -2.5489 REMARK 3 L13: 2.2352 L23: -7.1281 REMARK 3 S TENSOR REMARK 3 S11: 0.1662 S12: -0.6842 S13: -0.2123 REMARK 3 S21: -0.2862 S22: 0.1582 S23: 0.4353 REMARK 3 S31: 1.3494 S32: -1.2019 S33: -0.3391 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and resid 489 through 626) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "B" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "C" and (resid 1 through 17 or REMARK 3 resid 18)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "D" and (resid 1 through 17 or REMARK 3 resid 18)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UYK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000265116. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97932 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15585 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 44.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.81000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4DBG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% W/V GLYCEROL, 20% W/V ETHANOL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 63.86500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.07000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 63.86500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.07000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 474 REMARK 465 PRO A 475 REMARK 465 GLY A 476 REMARK 465 SER A 477 REMARK 465 GLU A 478 REMARK 465 PHE A 479 REMARK 465 ARG A 480 REMARK 465 GLN A 481 REMARK 465 ASP A 482 REMARK 465 LYS A 483 REMARK 465 MET A 484 REMARK 465 ARG A 485 REMARK 465 GLU A 486 REMARK 465 SER A 627 REMARK 465 GLY A 628 REMARK 465 PRO A 629 REMARK 465 GLU A 630 REMARK 465 PRO A 631 REMARK 465 THR A 632 REMARK 465 PRO A 633 REMARK 465 SER A 634 REMARK 465 TRP A 635 REMARK 465 ASP A 636 REMARK 465 GLY A 637 REMARK 465 PRO A 638 REMARK 465 ASP A 639 REMARK 465 GLY B 474 REMARK 465 PRO B 475 REMARK 465 GLY B 476 REMARK 465 SER B 477 REMARK 465 GLU B 478 REMARK 465 PHE B 479 REMARK 465 ARG B 480 REMARK 465 GLN B 481 REMARK 465 ASP B 482 REMARK 465 LYS B 483 REMARK 465 MET B 484 REMARK 465 ARG B 485 REMARK 465 GLU B 486 REMARK 465 GLU B 487 REMARK 465 GLY B 488 REMARK 465 SER B 627 REMARK 465 GLY B 628 REMARK 465 PRO B 629 REMARK 465 GLU B 630 REMARK 465 PRO B 631 REMARK 465 THR B 632 REMARK 465 PRO B 633 REMARK 465 SER B 634 REMARK 465 TRP B 635 REMARK 465 ASP B 636 REMARK 465 GLY B 637 REMARK 465 PRO B 638 REMARK 465 ASP B 639 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER C 17 N NH2 C 101 2.07 REMARK 500 O SER D 17 N NH2 D 101 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7UWI RELATED DB: PDB REMARK 900 RELATED ID: 7UWO RELATED DB: PDB DBREF 7UYK A 480 639 UNP Q96EP0 RNF31_HUMAN 480 639 DBREF 7UYK B 480 639 UNP Q96EP0 RNF31_HUMAN 480 639 DBREF 7UYK D 1 17 PDB 7UYK 7UYK 1 17 DBREF 7UYK C 1 17 PDB 7UYK 7UYK 1 17 SEQADV 7UYK GLY A 474 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK PRO A 475 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK GLY A 476 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK SER A 477 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK GLU A 478 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK PHE A 479 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK GLY B 474 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK PRO B 475 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK GLY B 476 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK SER B 477 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK GLU B 478 UNP Q96EP0 EXPRESSION TAG SEQADV 7UYK PHE B 479 UNP Q96EP0 EXPRESSION TAG SEQRES 1 A 166 GLY PRO GLY SER GLU PHE ARG GLN ASP LYS MET ARG GLU SEQRES 2 A 166 GLU GLY LEU GLN LEU VAL SER MET ILE ARG GLU GLY GLU SEQRES 3 A 166 ALA ALA GLY ALA CYS PRO GLU GLU ILE PHE SER ALA LEU SEQRES 4 A 166 GLN TYR SER GLY THR GLU VAL PRO LEU GLN TRP LEU ARG SEQRES 5 A 166 SER GLU LEU PRO TYR VAL LEU GLU MET VAL ALA GLU LEU SEQRES 6 A 166 ALA GLY GLN GLN ASP PRO GLY LEU GLY ALA PHE SER CYS SEQRES 7 A 166 GLN GLU ALA ARG ARG ALA TRP LEU ASP ARG HIS GLY ASN SEQRES 8 A 166 LEU ASP GLU ALA VAL GLU GLU CYS VAL ARG THR ARG ARG SEQRES 9 A 166 ARG LYS VAL GLN GLU LEU GLN SER LEU GLY PHE GLY PRO SEQRES 10 A 166 GLU GLU GLY SER LEU GLN ALA LEU PHE GLN HIS GLY GLY SEQRES 11 A 166 ASP VAL SER ARG ALA LEU THR GLU LEU GLN ARG GLN ARG SEQRES 12 A 166 LEU GLU PRO PHE ARG GLN ARG LEU TRP ASP SER GLY PRO SEQRES 13 A 166 GLU PRO THR PRO SER TRP ASP GLY PRO ASP SEQRES 1 B 166 GLY PRO GLY SER GLU PHE ARG GLN ASP LYS MET ARG GLU SEQRES 2 B 166 GLU GLY LEU GLN LEU VAL SER MET ILE ARG GLU GLY GLU SEQRES 3 B 166 ALA ALA GLY ALA CYS PRO GLU GLU ILE PHE SER ALA LEU SEQRES 4 B 166 GLN TYR SER GLY THR GLU VAL PRO LEU GLN TRP LEU ARG SEQRES 5 B 166 SER GLU LEU PRO TYR VAL LEU GLU MET VAL ALA GLU LEU SEQRES 6 B 166 ALA GLY GLN GLN ASP PRO GLY LEU GLY ALA PHE SER CYS SEQRES 7 B 166 GLN GLU ALA ARG ARG ALA TRP LEU ASP ARG HIS GLY ASN SEQRES 8 B 166 LEU ASP GLU ALA VAL GLU GLU CYS VAL ARG THR ARG ARG SEQRES 9 B 166 ARG LYS VAL GLN GLU LEU GLN SER LEU GLY PHE GLY PRO SEQRES 10 B 166 GLU GLU GLY SER LEU GLN ALA LEU PHE GLN HIS GLY GLY SEQRES 11 B 166 ASP VAL SER ARG ALA LEU THR GLU LEU GLN ARG GLN ARG SEQRES 12 B 166 LEU GLU PRO PHE ARG GLN ARG LEU TRP ASP SER GLY PRO SEQRES 13 B 166 GLU PRO THR PRO SER TRP ASP GLY PRO ASP SEQRES 1 D 17 ASP PRO ALA MET GLN ARG CYS PHE SER ALA ALA VAL TYR SEQRES 2 D 17 CYS ALA ILE SER SEQRES 1 C 17 ASP PRO ALA MET GLN ARG CYS PHE SER ALA ALA VAL TYR SEQRES 2 C 17 CYS ALA ILE SER HET NH2 D 101 1 HET WHL D 102 14 HET NH2 C 101 1 HET WHL C 102 14 HETNAM NH2 AMINO GROUP HETNAM WHL N,N'-(1,4-PHENYLENE)DIACETAMIDE FORMUL 5 NH2 2(H2 N) FORMUL 6 WHL 2(C10 H12 N2 O2) FORMUL 9 HOH *10(H2 O) HELIX 1 AA1 LEU A 489 GLY A 502 1 14 HELIX 2 AA2 CYS A 504 SER A 515 1 12 HELIX 3 AA3 PRO A 520 GLU A 527 1 8 HELIX 4 AA4 GLU A 527 ASP A 543 1 17 HELIX 5 AA5 SER A 550 ARG A 561 1 12 HELIX 6 AA6 ASN A 564 SER A 585 1 22 HELIX 7 AA7 GLY A 589 GLU A 592 5 4 HELIX 8 AA8 GLY A 593 HIS A 601 1 9 HELIX 9 AA9 ASP A 604 ASP A 626 1 23 HELIX 10 AB1 GLN B 490 GLY B 502 1 13 HELIX 11 AB2 CYS B 504 SER B 515 1 12 HELIX 12 AB3 PRO B 520 GLU B 527 1 8 HELIX 13 AB4 GLU B 527 ASP B 543 1 17 HELIX 14 AB5 PRO B 544 GLY B 547 5 4 HELIX 15 AB6 SER B 550 ARG B 561 1 12 HELIX 16 AB7 ASN B 564 SER B 585 1 22 HELIX 17 AB8 GLY B 589 GLU B 592 5 4 HELIX 18 AB9 GLY B 593 HIS B 601 1 9 HELIX 19 AC1 ASP B 604 ASP B 626 1 23 HELIX 20 AC2 PRO D 2 SER D 17 1 16 HELIX 21 AC3 PRO C 2 SER C 17 1 16 LINK SG CYS D 7 CK WHL D 102 1555 1555 1.85 LINK SG CYS D 14 CH WHL D 102 1555 1555 1.87 LINK C SER D 17 N NH2 D 101 1555 1555 1.43 LINK SG CYS C 7 CK WHL C 102 1555 1555 1.85 LINK SG CYS C 14 CH WHL C 102 1555 1555 1.85 LINK C SER C 17 N NH2 C 101 1555 1555 1.43 CRYST1 127.730 70.140 89.220 90.00 134.18 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007829 0.000000 0.007608 0.00000 SCALE2 0.000000 0.014257 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015629 0.00000 MTRIX1 1 0.025372 -0.003539 0.999672 -31.25528 1 MTRIX2 1 -0.001399 -0.999993 -0.003505 -47.53927 1 MTRIX3 1 0.999677 -0.001310 -0.025377 31.90358 1 MTRIX1 2 0.030458 0.001623 0.999535 -30.89762 1 MTRIX2 2 -0.001180 -0.999998 0.001660 -47.55894 1 MTRIX3 2 0.999535 -0.001230 -0.030456 31.93692 1