data_7V06 # _entry.id 7V06 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7V06 pdb_00007v06 10.2210/pdb7v06/pdb WWPDB D_1000263548 ? ? BMRB 51310 ? 10.13018/BMR51310 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-06-29 2 'Structure model' 1 1 2022-08-10 3 'Structure model' 1 2 2023-06-14 4 'Structure model' 1 3 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Other 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' pdbx_database_status 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 13 4 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7V06 _pdbx_database_status.recvd_initial_deposition_date 2022-05-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type BMRB . 51310 unspecified SASBDB . SASDPD3 'associated SAS data' # _pdbx_contact_author.id 2 _pdbx_contact_author.email bst18@case.edu _pdbx_contact_author.name_first Blanton _pdbx_contact_author.name_last Tolbert _pdbx_contact_author.name_mi S _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2456-0443 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Tolbert, B.S.' 1 0000-0003-2456-0443 'Chiu, L.Y.' 2 0000-0002-0584-1023 'Sugarman, A.L.' 3 0000-0003-3348-2977 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Mol.Biol. _citation.journal_id_ASTM JMOBAK _citation.journal_id_CSD 0070 _citation.journal_id_ISSN 1089-8638 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first 167728 _citation.page_last 167728 _citation.title ;Encoded Conformational Dynamics of the HIV Splice Site A3 Regulatory Locus: Implications for Differential Binding of hnRNP Splicing Auxiliary Factors. ; _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.jmb.2022.167728 _citation.pdbx_database_id_PubMed 35870649 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chiu, L.Y.' 1 ? primary 'Emery, A.' 2 ? primary 'Jain, N.' 3 ? primary 'Sugarman, A.' 4 ? primary 'Kendrick, N.' 5 ? primary 'Luo, L.' 6 ? primary 'Ford, W.' 7 ? primary 'Swanstrom, R.' 8 ? primary 'Tolbert, B.S.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'RNA (43-MER)' _entity.formula_weight 13748.113 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGUGCUGUUUAUCCAUUUCAGAAUUGGGUGUCGACAUAGCACC _entity_poly.pdbx_seq_one_letter_code_can GGUGCUGUUUAUCCAUUUCAGAAUUGGGUGUCGACAUAGCACC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 G n 1 5 C n 1 6 U n 1 7 G n 1 8 U n 1 9 U n 1 10 U n 1 11 A n 1 12 U n 1 13 C n 1 14 C n 1 15 A n 1 16 U n 1 17 U n 1 18 U n 1 19 C n 1 20 A n 1 21 G n 1 22 A n 1 23 A n 1 24 U n 1 25 U n 1 26 G n 1 27 G n 1 28 G n 1 29 U n 1 30 G n 1 31 U n 1 32 C n 1 33 G n 1 34 A n 1 35 C n 1 36 A n 1 37 U n 1 38 A n 1 39 G n 1 40 C n 1 41 A n 1 42 C n 1 43 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 43 _pdbx_entity_src_syn.organism_scientific 'HIV whole-genome vector AA1305#18' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 672471 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 U 3 3 3 U U A . n A 1 4 G 4 4 4 G G A . n A 1 5 C 5 5 5 C C A . n A 1 6 U 6 6 6 U U A . n A 1 7 G 7 7 7 G G A . n A 1 8 U 8 8 8 U U A . n A 1 9 U 9 9 9 U U A . n A 1 10 U 10 10 10 U U A . n A 1 11 A 11 11 11 A A A . n A 1 12 U 12 12 12 U U A . n A 1 13 C 13 13 13 C C A . n A 1 14 C 14 14 14 C C A . n A 1 15 A 15 15 15 A A A . n A 1 16 U 16 16 16 U U A . n A 1 17 U 17 17 17 U U A . n A 1 18 U 18 18 18 U U A . n A 1 19 C 19 19 19 C C A . n A 1 20 A 20 20 20 A A A . n A 1 21 G 21 21 21 G G A . n A 1 22 A 22 22 22 A A A . n A 1 23 A 23 23 23 A A A . n A 1 24 U 24 24 24 U U A . n A 1 25 U 25 25 25 U U A . n A 1 26 G 26 26 26 G G A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 U 29 29 29 U U A . n A 1 30 G 30 30 30 G G A . n A 1 31 U 31 31 31 U U A . n A 1 32 C 32 32 32 C C A . n A 1 33 G 33 33 33 G G A . n A 1 34 A 34 34 34 A A A . n A 1 35 C 35 35 35 C C A . n A 1 36 A 36 36 36 A A A . n A 1 37 U 37 37 37 U U A . n A 1 38 A 38 38 38 A A A . n A 1 39 G 39 39 39 G G A . n A 1 40 C 40 40 40 C C A . n A 1 41 A 41 41 41 A A A . n A 1 42 C 42 42 42 C C A . n A 1 43 C 43 43 43 C C A . n # loop_ _exptl.absorpt_coefficient_mu _exptl.absorpt_correction_T_max _exptl.absorpt_correction_T_min _exptl.absorpt_correction_type _exptl.absorpt_process_details _exptl.entry_id _exptl.crystals_number _exptl.details _exptl.method _exptl.method_details ? ? ? ? ? 7V06 ? ? 'SOLUTION NMR' ? ? ? ? ? ? 7V06 ? ? 'SOLUTION SCATTERING' ? # _struct.entry_id 7V06 _struct.title ;Encoded Conformational Dynamics of the HIV Splice Site A3 Regulatory Locus: Implications for differential binding of hnRNP Splicing Auxiliary Factors ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7V06 _struct_keywords.text 'HIV, RNA regulatory element, splice site A3, RNA' _struct_keywords.pdbx_keywords RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7V06 _struct_ref.pdbx_db_accession 7V06 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7V06 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 43 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7V06 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 43 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 43 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 43 N3 ? ? A G 1 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 43 O2 ? ? A G 1 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 43 N4 ? ? A G 1 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 42 N3 ? ? A G 2 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 42 O2 ? ? A G 2 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 42 N4 ? ? A G 2 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 41 N1 ? ? A U 3 A A 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 41 N6 ? ? A U 3 A A 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 40 N3 ? ? A G 4 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 40 O2 ? ? A G 4 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 40 N4 ? ? A G 4 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 39 N1 ? ? A C 5 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 39 O6 ? ? A C 5 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 39 N2 ? ? A C 5 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 38 N1 ? ? A U 6 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 38 N6 ? ? A U 6 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N1 ? ? ? 1_555 A U 37 O2 ? ? A G 7 A U 37 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog18 hydrog ? ? A G 7 O6 ? ? ? 1_555 A U 37 N3 ? ? A G 7 A U 37 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog19 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 36 N1 ? ? A U 8 A A 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 36 N6 ? ? A U 8 A A 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 9 O4 ? ? ? 1_555 A U 31 N3 ? ? A U 9 A U 31 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog22 hydrog ? ? A U 9 O2 ? ? ? 1_555 A C 35 N4 ? ? A U 9 A C 35 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog23 hydrog ? ? A U 10 N3 ? ? ? 1_555 A G 30 O6 ? ? A U 10 A G 30 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog24 hydrog ? ? A U 10 O2 ? ? ? 1_555 A G 30 N1 ? ? A U 10 A G 30 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? A A 11 N1 ? ? ? 1_555 A U 29 N3 ? ? A A 11 A U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 11 N6 ? ? ? 1_555 A U 29 O4 ? ? A A 11 A U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A U 12 N3 ? ? ? 1_555 A G 28 O6 ? ? A U 12 A G 28 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog28 hydrog ? ? A U 12 O2 ? ? ? 1_555 A G 28 N1 ? ? A U 12 A G 28 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog29 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 27 N1 ? ? A C 13 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 27 O6 ? ? A C 13 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 27 N2 ? ? A C 13 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 14 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 14 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 14 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A A 15 N1 ? ? ? 1_555 A U 25 N3 ? ? A A 15 A U 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A A 15 N6 ? ? ? 1_555 A U 25 O4 ? ? A A 15 A U 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 16 N3 ? ? ? 1_555 A U 24 O4 ? ? A U 16 A U 24 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog38 hydrog ? ? A U 16 O2 ? ? ? 1_555 A U 24 N3 ? ? A U 16 A U 24 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog39 hydrog ? ? A U 17 N3 ? ? ? 1_555 A A 23 N1 ? ? A U 17 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A U 17 O4 ? ? ? 1_555 A A 23 N6 ? ? A U 17 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A U 18 O2 ? ? ? 1_555 A A 22 N6 ? ? A U 18 A A 22 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog42 hydrog ? ? A G 30 N2 ? ? ? 1_555 A G 33 O6 ? ? A G 30 A G 33 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog43 hydrog ? ? A U 31 O2 ? ? ? 1_555 A A 34 N6 ? ? A U 31 A A 34 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.74 121.90 -5.16 0.70 N 2 1 "O4'" A U 8 ? ? "C1'" A U 8 ? ? N1 A U 8 ? ? 112.88 108.50 4.38 0.70 N 3 1 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 113.89 117.00 -3.11 0.50 N 4 1 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 121.05 117.70 3.35 0.50 N 5 1 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 114.57 118.60 -4.03 0.60 N 6 1 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.80 121.90 -5.10 0.70 N 7 1 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.67 121.90 -5.23 0.70 N 8 1 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.54 117.00 -3.46 0.50 N 9 1 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 121.02 117.70 3.32 0.50 N 10 1 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 113.55 118.60 -5.05 0.60 N 11 1 C4 A A 20 ? ? C5 A A 20 ? ? C6 A A 20 ? ? 113.76 117.00 -3.24 0.50 N 12 1 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.52 117.70 3.82 0.50 N 13 1 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 112.93 118.60 -5.67 0.60 N 14 1 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.33 117.00 -3.67 0.50 N 15 1 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.33 117.70 3.63 0.50 N 16 1 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 112.77 118.60 -5.83 0.60 N 17 1 C4 A A 23 ? ? C5 A A 23 ? ? C6 A A 23 ? ? 113.92 117.00 -3.08 0.50 N 18 1 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 120.74 117.70 3.04 0.50 N 19 1 N1 A A 23 ? ? C6 A A 23 ? ? N6 A A 23 ? ? 113.73 118.60 -4.87 0.60 N 20 1 N3 A C 32 ? ? C2 A C 32 ? ? O2 A C 32 ? ? 116.99 121.90 -4.91 0.70 N 21 1 C4 A A 34 ? ? C5 A A 34 ? ? C6 A A 34 ? ? 113.99 117.00 -3.01 0.50 N 22 1 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.16 117.70 3.46 0.50 N 23 1 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.57 118.60 -5.03 0.60 N 24 1 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.45 121.90 -4.45 0.70 N 25 1 C4 A A 36 ? ? C5 A A 36 ? ? C6 A A 36 ? ? 113.93 117.00 -3.07 0.50 N 26 1 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.10 117.70 3.40 0.50 N 27 1 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 114.30 118.60 -4.30 0.60 N 28 1 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.76 117.00 -3.24 0.50 N 29 1 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 120.98 117.70 3.28 0.50 N 30 1 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 114.34 118.60 -4.26 0.60 N 31 1 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 116.96 121.90 -4.94 0.70 N 32 1 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.82 117.00 -3.18 0.50 N 33 1 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 121.05 117.70 3.35 0.50 N 34 1 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.09 118.60 -4.51 0.60 N 35 1 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.98 121.90 -4.92 0.70 N 36 1 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.66 121.90 -5.24 0.70 N 37 2 N1 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 122.51 118.90 3.61 0.60 N 38 2 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.68 121.90 -5.22 0.70 N 39 2 "O4'" A U 9 ? ? "C1'" A U 9 ? ? N1 A U 9 ? ? 113.12 108.50 4.62 0.70 N 40 2 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 113.73 117.00 -3.27 0.50 N 41 2 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 120.91 117.70 3.21 0.50 N 42 2 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 114.02 118.60 -4.58 0.60 N 43 2 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.80 121.90 -5.10 0.70 N 44 2 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.80 121.90 -5.10 0.70 N 45 2 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.57 117.00 -3.43 0.50 N 46 2 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 120.95 117.70 3.25 0.50 N 47 2 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 113.50 118.60 -5.10 0.60 N 48 2 C4 A A 20 ? ? C5 A A 20 ? ? C6 A A 20 ? ? 113.71 117.00 -3.29 0.50 N 49 2 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.51 117.70 3.81 0.50 N 50 2 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 112.87 118.60 -5.73 0.60 N 51 2 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.42 117.00 -3.58 0.50 N 52 2 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.34 117.70 3.64 0.50 N 53 2 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 112.60 118.60 -6.00 0.60 N 54 2 C4 A A 23 ? ? C5 A A 23 ? ? C6 A A 23 ? ? 113.84 117.00 -3.16 0.50 N 55 2 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 120.73 117.70 3.03 0.50 N 56 2 N1 A A 23 ? ? C6 A A 23 ? ? N6 A A 23 ? ? 113.80 118.60 -4.80 0.60 N 57 2 N3 A C 32 ? ? C2 A C 32 ? ? O2 A C 32 ? ? 117.69 121.90 -4.21 0.70 N 58 2 C4 A A 34 ? ? C5 A A 34 ? ? C6 A A 34 ? ? 113.95 117.00 -3.05 0.50 N 59 2 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.22 117.70 3.52 0.50 N 60 2 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.32 118.60 -5.28 0.60 N 61 2 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.41 121.90 -4.49 0.70 N 62 2 C4 A A 36 ? ? C5 A A 36 ? ? C6 A A 36 ? ? 113.93 117.00 -3.07 0.50 N 63 2 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.33 117.70 3.63 0.50 N 64 2 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 113.45 118.60 -5.15 0.60 N 65 2 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.84 117.00 -3.16 0.50 N 66 2 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 121.05 117.70 3.35 0.50 N 67 2 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 114.00 118.60 -4.60 0.60 N 68 2 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 117.00 121.90 -4.90 0.70 N 69 2 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.81 117.00 -3.19 0.50 N 70 2 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 121.02 117.70 3.32 0.50 N 71 2 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.20 118.60 -4.40 0.60 N 72 2 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.80 121.90 -5.10 0.70 N 73 2 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.67 121.90 -5.23 0.70 N 74 3 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.69 121.90 -5.21 0.70 N 75 3 "O4'" A U 9 ? ? "C1'" A U 9 ? ? N1 A U 9 ? ? 113.24 108.50 4.74 0.70 N 76 3 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 113.79 117.00 -3.21 0.50 N 77 3 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 121.08 117.70 3.38 0.50 N 78 3 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 114.19 118.60 -4.41 0.60 N 79 3 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.73 121.90 -5.17 0.70 N 80 3 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.56 121.90 -5.34 0.70 N 81 3 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.48 117.00 -3.52 0.50 N 82 3 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 121.01 117.70 3.31 0.50 N 83 3 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 113.52 118.60 -5.08 0.60 N 84 3 N3 A C 19 ? ? C2 A C 19 ? ? O2 A C 19 ? ? 117.49 121.90 -4.41 0.70 N 85 3 C4 A A 20 ? ? C5 A A 20 ? ? C6 A A 20 ? ? 113.78 117.00 -3.22 0.50 N 86 3 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.46 117.70 3.76 0.50 N 87 3 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 113.47 118.60 -5.13 0.60 N 88 3 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.83 117.00 -3.17 0.50 N 89 3 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.14 117.70 3.44 0.50 N 90 3 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 113.38 118.60 -5.22 0.60 N 91 3 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 121.11 117.70 3.41 0.50 N 92 3 N3 A C 32 ? ? C2 A C 32 ? ? O2 A C 32 ? ? 117.69 121.90 -4.21 0.70 N 93 3 C4 A A 34 ? ? C5 A A 34 ? ? C6 A A 34 ? ? 113.88 117.00 -3.12 0.50 N 94 3 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.24 117.70 3.54 0.50 N 95 3 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.16 118.60 -5.44 0.60 N 96 3 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.41 121.90 -4.49 0.70 N 97 3 C4 A A 36 ? ? C5 A A 36 ? ? C6 A A 36 ? ? 113.88 117.00 -3.12 0.50 N 98 3 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.28 117.70 3.58 0.50 N 99 3 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 113.39 118.60 -5.21 0.60 N 100 3 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.88 117.00 -3.12 0.50 N 101 3 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 121.02 117.70 3.32 0.50 N 102 3 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 114.06 118.60 -4.54 0.60 N 103 3 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 116.95 121.90 -4.95 0.70 N 104 3 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.80 117.00 -3.20 0.50 N 105 3 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 121.06 117.70 3.36 0.50 N 106 3 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.16 118.60 -4.44 0.60 N 107 3 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.88 121.90 -5.02 0.70 N 108 3 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.63 121.90 -5.27 0.70 N 109 4 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.72 121.90 -5.18 0.70 N 110 4 N1 A G 7 ? ? C6 A G 7 ? ? O6 A G 7 ? ? 116.28 119.90 -3.62 0.60 N 111 4 "O4'" A U 9 ? ? "C1'" A U 9 ? ? N1 A U 9 ? ? 113.20 108.50 4.70 0.70 N 112 4 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 113.78 117.00 -3.22 0.50 N 113 4 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 120.94 117.70 3.24 0.50 N 114 4 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 114.06 118.60 -4.54 0.60 N 115 4 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.71 121.90 -5.19 0.70 N 116 4 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.72 121.90 -5.18 0.70 N 117 4 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.44 117.00 -3.56 0.50 N 118 4 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 121.13 117.70 3.43 0.50 N 119 4 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 113.57 118.60 -5.03 0.60 N 120 4 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 112.73 108.50 4.23 0.70 N 121 4 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.07 108.50 4.57 0.70 N 122 4 N3 A C 19 ? ? C2 A C 19 ? ? O2 A C 19 ? ? 117.55 121.90 -4.35 0.70 N 123 4 C4 A A 20 ? ? C5 A A 20 ? ? C6 A A 20 ? ? 113.10 117.00 -3.90 0.50 N 124 4 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.65 117.70 3.95 0.50 N 125 4 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 111.74 118.60 -6.86 0.60 N 126 4 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.64 117.00 -3.36 0.50 N 127 4 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.40 117.70 3.70 0.50 N 128 4 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 113.27 118.60 -5.33 0.60 N 129 4 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 121.21 117.70 3.51 0.50 N 130 4 N1 A G 30 ? ? C6 A G 30 ? ? O6 A G 30 ? ? 116.26 119.90 -3.64 0.60 N 131 4 N3 A C 32 ? ? C2 A C 32 ? ? O2 A C 32 ? ? 117.61 121.90 -4.29 0.70 N 132 4 C4 A A 34 ? ? C5 A A 34 ? ? C6 A A 34 ? ? 113.93 117.00 -3.07 0.50 N 133 4 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.23 117.70 3.53 0.50 N 134 4 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.29 118.60 -5.31 0.60 N 135 4 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.41 121.90 -4.49 0.70 N 136 4 C4 A A 36 ? ? C5 A A 36 ? ? C6 A A 36 ? ? 113.94 117.00 -3.06 0.50 N 137 4 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.29 117.70 3.59 0.50 N 138 4 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 113.40 118.60 -5.20 0.60 N 139 4 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.88 117.00 -3.12 0.50 N 140 4 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 120.99 117.70 3.29 0.50 N 141 4 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 114.05 118.60 -4.55 0.60 N 142 4 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 116.92 121.90 -4.98 0.70 N 143 4 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.82 117.00 -3.18 0.50 N 144 4 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 120.98 117.70 3.28 0.50 N 145 4 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.30 118.60 -4.30 0.60 N 146 4 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.83 121.90 -5.07 0.70 N 147 4 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.58 121.90 -5.32 0.70 N 148 5 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.91 121.90 -4.99 0.70 N 149 5 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 113.69 117.00 -3.31 0.50 N 150 5 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 120.96 117.70 3.26 0.50 N 151 5 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 114.05 118.60 -4.55 0.60 N 152 5 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.77 121.90 -5.13 0.70 N 153 5 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.67 121.90 -5.23 0.70 N 154 5 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.48 117.00 -3.52 0.50 N 155 5 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 121.16 117.70 3.46 0.50 N 156 5 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 113.61 118.60 -4.99 0.60 N 157 5 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 112.97 108.50 4.47 0.70 N 158 5 N3 A C 19 ? ? C2 A C 19 ? ? O2 A C 19 ? ? 117.58 121.90 -4.32 0.70 N 159 5 C4 A A 20 ? ? C5 A A 20 ? ? C6 A A 20 ? ? 113.13 117.00 -3.87 0.50 N 160 5 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.61 117.70 3.91 0.50 N 161 5 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 111.85 118.60 -6.75 0.60 N 162 5 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.65 117.00 -3.35 0.50 N 163 5 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.35 117.70 3.65 0.50 N 164 5 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 113.26 118.60 -5.34 0.60 N 165 5 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 121.17 117.70 3.47 0.50 N 166 5 "O4'" A C 32 ? ? "C1'" A C 32 ? ? N1 A C 32 ? ? 113.09 108.50 4.59 0.70 N 167 5 N3 A C 32 ? ? C2 A C 32 ? ? O2 A C 32 ? ? 117.15 121.90 -4.75 0.70 N 168 5 C4 A A 34 ? ? C5 A A 34 ? ? C6 A A 34 ? ? 113.90 117.00 -3.10 0.50 N 169 5 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.35 117.70 3.65 0.50 N 170 5 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.39 118.60 -5.21 0.60 N 171 5 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.50 121.90 -4.40 0.70 N 172 5 C4 A A 36 ? ? C5 A A 36 ? ? C6 A A 36 ? ? 113.99 117.00 -3.01 0.50 N 173 5 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.07 117.70 3.37 0.50 N 174 5 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 114.52 118.60 -4.08 0.60 N 175 5 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.89 117.00 -3.11 0.50 N 176 5 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 120.87 117.70 3.17 0.50 N 177 5 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 114.26 118.60 -4.34 0.60 N 178 5 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 116.83 121.90 -5.07 0.70 N 179 5 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.83 117.00 -3.17 0.50 N 180 5 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 120.97 117.70 3.27 0.50 N 181 5 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.17 118.60 -4.43 0.60 N 182 5 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.84 121.90 -5.06 0.70 N 183 5 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.82 121.90 -5.08 0.70 N 184 6 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.72 121.90 -5.18 0.70 N 185 6 N1 A G 7 ? ? C6 A G 7 ? ? O6 A G 7 ? ? 116.25 119.90 -3.65 0.60 N 186 6 "O4'" A U 9 ? ? "C1'" A U 9 ? ? N1 A U 9 ? ? 113.20 108.50 4.70 0.70 N 187 6 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 113.76 117.00 -3.24 0.50 N 188 6 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 120.88 117.70 3.18 0.50 N 189 6 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 113.97 118.60 -4.63 0.60 N 190 6 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.64 121.90 -5.26 0.70 N 191 6 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.89 121.90 -5.01 0.70 N 192 6 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.81 117.00 -3.19 0.50 N 193 6 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 121.49 117.70 3.79 0.50 N 194 6 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 114.49 118.60 -4.11 0.60 N 195 6 N3 A C 19 ? ? C2 A C 19 ? ? O2 A C 19 ? ? 116.99 121.90 -4.91 0.70 N 196 6 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.25 117.70 3.55 0.50 N 197 6 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 113.27 118.60 -5.33 0.60 N 198 6 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.86 117.00 -3.14 0.50 N 199 6 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.38 117.70 3.68 0.50 N 200 6 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 113.90 118.60 -4.70 0.60 N 201 6 C4 A A 23 ? ? C5 A A 23 ? ? C6 A A 23 ? ? 113.97 117.00 -3.03 0.50 N 202 6 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 121.24 117.70 3.54 0.50 N 203 6 N1 A A 23 ? ? C6 A A 23 ? ? N6 A A 23 ? ? 114.28 118.60 -4.32 0.60 N 204 6 N3 A U 25 ? ? C2 A U 25 ? ? O2 A U 25 ? ? 116.31 122.20 -5.89 0.70 N 205 6 N1 A G 30 ? ? C6 A G 30 ? ? O6 A G 30 ? ? 116.16 119.90 -3.74 0.60 N 206 6 N3 A C 32 ? ? C2 A C 32 ? ? O2 A C 32 ? ? 117.56 121.90 -4.34 0.70 N 207 6 C4 A A 34 ? ? C5 A A 34 ? ? C6 A A 34 ? ? 113.95 117.00 -3.05 0.50 N 208 6 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.27 117.70 3.57 0.50 N 209 6 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.20 118.60 -5.40 0.60 N 210 6 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.47 121.90 -4.43 0.70 N 211 6 C4 A A 36 ? ? C5 A A 36 ? ? C6 A A 36 ? ? 113.92 117.00 -3.08 0.50 N 212 6 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.23 117.70 3.53 0.50 N 213 6 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 113.45 118.60 -5.15 0.60 N 214 6 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.89 117.00 -3.11 0.50 N 215 6 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 121.03 117.70 3.33 0.50 N 216 6 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 113.99 118.60 -4.61 0.60 N 217 6 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 116.85 121.90 -5.05 0.70 N 218 6 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.88 117.00 -3.12 0.50 N 219 6 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 120.97 117.70 3.27 0.50 N 220 6 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.33 118.60 -4.27 0.60 N 221 6 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.86 121.90 -5.04 0.70 N 222 6 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.60 121.90 -5.30 0.70 N 223 7 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.79 121.90 -5.11 0.70 N 224 7 "O4'" A U 9 ? ? "C1'" A U 9 ? ? N1 A U 9 ? ? 113.11 108.50 4.61 0.70 N 225 7 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 113.74 117.00 -3.26 0.50 N 226 7 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 121.01 117.70 3.31 0.50 N 227 7 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 113.85 118.60 -4.75 0.60 N 228 7 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.82 121.90 -5.08 0.70 N 229 7 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.70 121.90 -5.20 0.70 N 230 7 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.48 117.00 -3.52 0.50 N 231 7 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 121.18 117.70 3.48 0.50 N 232 7 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 113.48 118.60 -5.12 0.60 N 233 7 "O4'" A U 18 ? ? "C1'" A U 18 ? ? N1 A U 18 ? ? 112.72 108.50 4.22 0.70 N 234 7 N3 A C 19 ? ? C2 A C 19 ? ? O2 A C 19 ? ? 117.64 121.90 -4.26 0.70 N 235 7 C4 A A 20 ? ? C5 A A 20 ? ? C6 A A 20 ? ? 113.06 117.00 -3.94 0.50 N 236 7 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.64 117.70 3.94 0.50 N 237 7 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 111.47 118.60 -7.13 0.60 N 238 7 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.62 117.00 -3.38 0.50 N 239 7 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.30 117.70 3.60 0.50 N 240 7 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 113.28 118.60 -5.32 0.60 N 241 7 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 121.14 117.70 3.44 0.50 N 242 7 N1 A G 30 ? ? C6 A G 30 ? ? O6 A G 30 ? ? 116.14 119.90 -3.76 0.60 N 243 7 N3 A C 32 ? ? C2 A C 32 ? ? O2 A C 32 ? ? 117.53 121.90 -4.37 0.70 N 244 7 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.40 117.70 3.70 0.50 N 245 7 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.88 118.60 -4.72 0.60 N 246 7 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.26 121.90 -4.64 0.70 N 247 7 C4 A A 36 ? ? C5 A A 36 ? ? C6 A A 36 ? ? 113.81 117.00 -3.19 0.50 N 248 7 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.20 117.70 3.50 0.50 N 249 7 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 112.78 118.60 -5.82 0.60 N 250 7 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.79 117.00 -3.21 0.50 N 251 7 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 121.04 117.70 3.34 0.50 N 252 7 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 113.88 118.60 -4.72 0.60 N 253 7 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 116.90 121.90 -5.00 0.70 N 254 7 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.77 117.00 -3.23 0.50 N 255 7 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 120.97 117.70 3.27 0.50 N 256 7 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.27 118.60 -4.33 0.60 N 257 7 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.79 121.90 -5.11 0.70 N 258 7 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.63 121.90 -5.27 0.70 N 259 8 N1 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 122.55 118.90 3.65 0.60 N 260 8 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.65 121.90 -5.25 0.70 N 261 8 "O4'" A U 9 ? ? "C1'" A U 9 ? ? N1 A U 9 ? ? 113.38 108.50 4.88 0.70 N 262 8 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 112.77 117.00 -4.23 0.50 N 263 8 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 123.34 117.70 5.64 0.50 N 264 8 C6 A A 11 ? ? C5 A A 11 ? ? N7 A A 11 ? ? 136.65 132.30 4.35 0.70 N 265 8 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 112.50 118.60 -6.10 0.60 N 266 8 N3 A U 12 ? ? C2 A U 12 ? ? O2 A U 12 ? ? 117.13 122.20 -5.07 0.70 N 267 8 N1 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 122.60 118.90 3.70 0.60 N 268 8 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.68 121.90 -5.22 0.70 N 269 8 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.66 121.90 -5.24 0.70 N 270 8 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.40 117.00 -3.60 0.50 N 271 8 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 121.07 117.70 3.37 0.50 N 272 8 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 113.42 118.60 -5.18 0.60 N 273 8 N3 A C 19 ? ? C2 A C 19 ? ? O2 A C 19 ? ? 117.57 121.90 -4.33 0.70 N 274 8 C4 A A 20 ? ? C5 A A 20 ? ? C6 A A 20 ? ? 113.67 117.00 -3.33 0.50 N 275 8 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.50 117.70 3.80 0.50 N 276 8 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 112.85 118.60 -5.75 0.60 N 277 8 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.70 117.00 -3.30 0.50 N 278 8 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.23 117.70 3.53 0.50 N 279 8 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 113.29 118.60 -5.31 0.60 N 280 8 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 121.14 117.70 3.44 0.50 N 281 8 C8 A G 28 ? ? N9 A G 28 ? ? "C1'" A G 28 ? ? 118.93 127.00 -8.07 1.30 N 282 8 C4 A G 28 ? ? N9 A G 28 ? ? "C1'" A G 28 ? ? 135.65 126.50 9.15 1.30 N 283 8 N1 A U 29 ? ? C2 A U 29 ? ? O2 A U 29 ? ? 127.03 122.80 4.23 0.70 N 284 8 N3 A U 29 ? ? C2 A U 29 ? ? O2 A U 29 ? ? 115.59 122.20 -6.61 0.70 N 285 8 C4 A A 34 ? ? C5 A A 34 ? ? C6 A A 34 ? ? 113.97 117.00 -3.03 0.50 N 286 8 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.25 117.70 3.55 0.50 N 287 8 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.22 118.60 -5.38 0.60 N 288 8 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.43 121.90 -4.47 0.70 N 289 8 C4 A A 36 ? ? C5 A A 36 ? ? C6 A A 36 ? ? 113.99 117.00 -3.01 0.50 N 290 8 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.31 117.70 3.61 0.50 N 291 8 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 113.57 118.60 -5.03 0.60 N 292 8 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.84 117.00 -3.16 0.50 N 293 8 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 121.08 117.70 3.38 0.50 N 294 8 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 114.06 118.60 -4.54 0.60 N 295 8 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 116.90 121.90 -5.00 0.70 N 296 8 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.80 117.00 -3.20 0.50 N 297 8 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 120.99 117.70 3.29 0.50 N 298 8 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.20 118.60 -4.40 0.60 N 299 8 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.81 121.90 -5.09 0.70 N 300 8 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.62 121.90 -5.28 0.70 N 301 9 N1 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 122.51 118.90 3.61 0.60 N 302 9 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.65 121.90 -5.25 0.70 N 303 9 "O4'" A U 8 ? ? "C1'" A U 8 ? ? N1 A U 8 ? ? 112.78 108.50 4.28 0.70 N 304 9 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 112.74 117.00 -4.26 0.50 N 305 9 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 123.20 117.70 5.50 0.50 N 306 9 C6 A A 11 ? ? C5 A A 11 ? ? N7 A A 11 ? ? 136.73 132.30 4.43 0.70 N 307 9 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 112.74 118.60 -5.86 0.60 N 308 9 N3 A U 12 ? ? C2 A U 12 ? ? O2 A U 12 ? ? 117.15 122.20 -5.05 0.70 N 309 9 N1 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 122.72 118.90 3.82 0.60 N 310 9 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.55 121.90 -5.35 0.70 N 311 9 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.64 121.90 -5.26 0.70 N 312 9 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.53 117.00 -3.47 0.50 N 313 9 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 121.16 117.70 3.46 0.50 N 314 9 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 113.28 118.60 -5.32 0.60 N 315 9 C4 A A 20 ? ? C5 A A 20 ? ? C6 A A 20 ? ? 113.83 117.00 -3.17 0.50 N 316 9 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.30 117.70 3.60 0.50 N 317 9 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 113.30 118.60 -5.30 0.60 N 318 9 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.94 117.00 -3.06 0.50 N 319 9 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.55 117.70 3.85 0.50 N 320 9 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 113.78 118.60 -4.82 0.60 N 321 9 C4 A A 23 ? ? C5 A A 23 ? ? C6 A A 23 ? ? 113.64 117.00 -3.36 0.50 N 322 9 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 121.35 117.70 3.65 0.50 N 323 9 N1 A A 23 ? ? C6 A A 23 ? ? N6 A A 23 ? ? 113.15 118.60 -5.45 0.60 N 324 9 N3 A U 24 ? ? C2 A U 24 ? ? O2 A U 24 ? ? 116.31 122.20 -5.89 0.70 N 325 9 C4 A G 28 ? ? N9 A G 28 ? ? "C1'" A G 28 ? ? 135.28 126.50 8.78 1.30 N 326 9 N3 A U 29 ? ? C2 A U 29 ? ? O2 A U 29 ? ? 115.64 122.20 -6.56 0.70 N 327 9 N3 A G 30 ? ? C4 A G 30 ? ? C5 A G 30 ? ? 125.60 128.60 -3.00 0.50 N 328 9 "O4'" A C 32 ? ? "C1'" A C 32 ? ? N1 A C 32 ? ? 112.71 108.50 4.21 0.70 N 329 9 N3 A C 32 ? ? C2 A C 32 ? ? O2 A C 32 ? ? 117.22 121.90 -4.68 0.70 N 330 9 C4 A A 34 ? ? C5 A A 34 ? ? C6 A A 34 ? ? 113.89 117.00 -3.11 0.50 N 331 9 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.42 117.70 3.72 0.50 N 332 9 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.30 118.60 -5.30 0.60 N 333 9 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.51 121.90 -4.39 0.70 N 334 9 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.01 117.70 3.31 0.50 N 335 9 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 114.29 118.60 -4.31 0.60 N 336 9 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.88 117.00 -3.12 0.50 N 337 9 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 120.86 117.70 3.16 0.50 N 338 9 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 114.16 118.60 -4.44 0.60 N 339 9 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 116.86 121.90 -5.04 0.70 N 340 9 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.76 117.00 -3.24 0.50 N 341 9 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 121.09 117.70 3.39 0.50 N 342 9 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.19 118.60 -4.41 0.60 N 343 9 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.75 121.90 -5.15 0.70 N 344 9 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.62 121.90 -5.28 0.70 N 345 10 N3 A C 5 ? ? C2 A C 5 ? ? O2 A C 5 ? ? 116.84 121.90 -5.06 0.70 N 346 10 "O4'" A U 9 ? ? "C1'" A U 9 ? ? N1 A U 9 ? ? 113.31 108.50 4.81 0.70 N 347 10 C4 A A 11 ? ? C5 A A 11 ? ? C6 A A 11 ? ? 112.81 117.00 -4.19 0.50 N 348 10 C5 A A 11 ? ? C6 A A 11 ? ? N1 A A 11 ? ? 123.38 117.70 5.68 0.50 N 349 10 C6 A A 11 ? ? C5 A A 11 ? ? N7 A A 11 ? ? 136.58 132.30 4.28 0.70 N 350 10 N1 A A 11 ? ? C6 A A 11 ? ? N6 A A 11 ? ? 112.38 118.60 -6.22 0.60 N 351 10 N3 A U 12 ? ? C2 A U 12 ? ? O2 A U 12 ? ? 117.09 122.20 -5.11 0.70 N 352 10 N1 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 122.72 118.90 3.82 0.60 N 353 10 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.67 121.90 -5.23 0.70 N 354 10 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.70 121.90 -5.20 0.70 N 355 10 C4 A A 15 ? ? C5 A A 15 ? ? C6 A A 15 ? ? 113.45 117.00 -3.55 0.50 N 356 10 C5 A A 15 ? ? C6 A A 15 ? ? N1 A A 15 ? ? 120.94 117.70 3.24 0.50 N 357 10 N1 A A 15 ? ? C6 A A 15 ? ? N6 A A 15 ? ? 113.34 118.60 -5.26 0.60 N 358 10 N3 A C 19 ? ? C2 A C 19 ? ? O2 A C 19 ? ? 117.57 121.90 -4.33 0.70 N 359 10 C4 A A 20 ? ? C5 A A 20 ? ? C6 A A 20 ? ? 113.55 117.00 -3.45 0.50 N 360 10 C5 A A 20 ? ? C6 A A 20 ? ? N1 A A 20 ? ? 121.42 117.70 3.72 0.50 N 361 10 N1 A A 20 ? ? C6 A A 20 ? ? N6 A A 20 ? ? 113.08 118.60 -5.52 0.60 N 362 10 C4 A A 22 ? ? C5 A A 22 ? ? C6 A A 22 ? ? 113.34 117.00 -3.66 0.50 N 363 10 C5 A A 22 ? ? C6 A A 22 ? ? N1 A A 22 ? ? 121.37 117.70 3.67 0.50 N 364 10 N1 A A 22 ? ? C6 A A 22 ? ? N6 A A 22 ? ? 112.84 118.60 -5.76 0.60 N 365 10 C4 A A 23 ? ? C5 A A 23 ? ? C6 A A 23 ? ? 113.84 117.00 -3.16 0.50 N 366 10 C5 A A 23 ? ? C6 A A 23 ? ? N1 A A 23 ? ? 120.78 117.70 3.08 0.50 N 367 10 N1 A A 23 ? ? C6 A A 23 ? ? N6 A A 23 ? ? 113.70 118.60 -4.90 0.60 N 368 10 C8 A G 28 ? ? N9 A G 28 ? ? "C1'" A G 28 ? ? 118.82 127.00 -8.18 1.30 N 369 10 C4 A G 28 ? ? N9 A G 28 ? ? "C1'" A G 28 ? ? 135.74 126.50 9.24 1.30 N 370 10 N3 A U 29 ? ? C2 A U 29 ? ? O2 A U 29 ? ? 115.59 122.20 -6.61 0.70 N 371 10 C4 A A 34 ? ? C5 A A 34 ? ? C6 A A 34 ? ? 113.91 117.00 -3.09 0.50 N 372 10 C5 A A 34 ? ? C6 A A 34 ? ? N1 A A 34 ? ? 121.27 117.70 3.57 0.50 N 373 10 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 113.11 118.60 -5.49 0.60 N 374 10 N3 A C 35 ? ? C2 A C 35 ? ? O2 A C 35 ? ? 117.40 121.90 -4.50 0.70 N 375 10 C4 A A 36 ? ? C5 A A 36 ? ? C6 A A 36 ? ? 113.92 117.00 -3.08 0.50 N 376 10 C5 A A 36 ? ? C6 A A 36 ? ? N1 A A 36 ? ? 121.33 117.70 3.63 0.50 N 377 10 N1 A A 36 ? ? C6 A A 36 ? ? N6 A A 36 ? ? 113.59 118.60 -5.01 0.60 N 378 10 C4 A A 38 ? ? C5 A A 38 ? ? C6 A A 38 ? ? 113.85 117.00 -3.15 0.50 N 379 10 C5 A A 38 ? ? C6 A A 38 ? ? N1 A A 38 ? ? 121.09 117.70 3.39 0.50 N 380 10 N1 A A 38 ? ? C6 A A 38 ? ? N6 A A 38 ? ? 113.98 118.60 -4.62 0.60 N 381 10 N3 A C 40 ? ? C2 A C 40 ? ? O2 A C 40 ? ? 116.85 121.90 -5.05 0.70 N 382 10 C4 A A 41 ? ? C5 A A 41 ? ? C6 A A 41 ? ? 113.77 117.00 -3.23 0.50 N 383 10 C5 A A 41 ? ? C6 A A 41 ? ? N1 A A 41 ? ? 121.01 117.70 3.31 0.50 N 384 10 N1 A A 41 ? ? C6 A A 41 ? ? N6 A A 41 ? ? 114.37 118.60 -4.23 0.60 N 385 10 N3 A C 42 ? ? C2 A C 42 ? ? O2 A C 42 ? ? 116.89 121.90 -5.01 0.70 N 386 10 N3 A C 43 ? ? C2 A C 43 ? ? O2 A C 43 ? ? 116.79 121.90 -5.11 0.70 N # _pdbx_nmr_ensemble.entry_id 7V06 _pdbx_nmr_ensemble.conformers_calculated_total_number 1024 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7V06 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '400 uM ESS2p, 90% H2O/10% D2O' '90% H2O/10% D2O' 'Fully protonated' solution ? 4 '400 uM [U-100% 13C; U-100% 15N on ATP and GTP ESS2p, 100% D2O' '100% D2O' 15N_13C_sample solution 'Uniform 15N and 13C labeling on ATP and GTP' 3 '450 uM selective deuteration ESS2p, 100% D2O' '100% D2O' 'Equimolar mix' solution ? 2 '300 uM Uniform_15N on GTP and UTP ESS2p, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N_sample solution ? 5 '300 uM Uniform_15N on all nucleotides ESS2p, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N_sample_HNNCOSY solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ESS2p 400 ? uM 'natural abundance' 4 ESS2p 400 ? uM '[U-100% 13C; U-100% 15N on ATP and GTP' 3 ESS2p 450 ? uM 'selective deuteration' 2 ESS2p 300 ? uM 'Uniform_15N on GTP and UTP' 5 ESS2p 300 ? uM 'Uniform_15N on all nucleotides' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 atm 1 6.5 5 ? ? mM conditions_1 ? pH ? ? K 2 283 atm 1 6.5 5 ? ? mM conditions_2 ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 2 1 '2D 1H-1H NOESY' 3 isotropic 2 1 4 '2D 1H-13C HMQC' 1 isotropic 3 1 3 '2D 1H-1H NOESY' 2 isotropic 4 1 1 '2D 1H-1H TOCSY' 2 isotropic 5 2 2 '2D 1H-15N HSQC' 2 isotropic 6 2 5 '2D 1H-15N HNN-COSY' 1 isotropic # _pdbx_nmr_refine.entry_id 7V06 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman' 2 'structure calculation' 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 3 'chemical shift assignment' NMRViewJ ? 'Bruce Johnson' 4 collection TopSpin ? 'Bruker Biospin' 5 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 6 'data analysis' NMRFAM-SPARKY ? 'Woonghee Lee, Marco Tonelli, John L Markley' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7V06 'double helix' 7V06 'a-form double helix' 7V06 'mismatched base pair' 7V06 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 43 1_555 -0.591 -0.167 0.441 8.259 -12.900 -0.030 1 A_G1:C43_A A 1 ? A 43 ? 19 1 1 A G 2 1_555 A C 42 1_555 -0.528 -0.184 0.244 0.231 -14.214 -0.777 2 A_G2:C42_A A 2 ? A 42 ? 19 1 1 A U 3 1_555 A A 41 1_555 0.057 -0.049 0.252 -6.895 -14.792 -1.241 3 A_U3:A41_A A 3 ? A 41 ? 20 1 1 A G 4 1_555 A C 40 1_555 -0.380 -0.166 0.351 -3.035 -12.429 -1.440 4 A_G4:C40_A A 4 ? A 40 ? 19 1 1 A C 5 1_555 A G 39 1_555 0.421 -0.169 0.369 -3.201 -12.313 -1.894 5 A_C5:G39_A A 5 ? A 39 ? 19 1 1 A U 6 1_555 A A 38 1_555 -0.004 -0.062 0.339 -1.501 -12.768 -0.782 6 A_U6:A38_A A 6 ? A 38 ? 20 1 1 A G 7 1_555 A U 37 1_555 -2.196 -0.427 0.334 4.748 -10.133 -1.734 7 A_G7:U37_A A 7 ? A 37 ? 28 1 1 A U 8 1_555 A A 36 1_555 0.125 -0.018 -0.016 2.380 -11.307 -0.629 8 A_U8:A36_A A 8 ? A 36 ? 20 1 1 A U 9 1_555 A U 31 1_555 -3.438 -1.349 0.932 13.089 4.272 -22.755 9 A_U9:U31_A A 9 ? A 31 ? ? ? 1 A U 10 1_555 A G 30 1_555 1.827 -0.488 0.583 9.573 -15.196 -10.002 10 A_U10:G30_A A 10 ? A 30 ? 28 1 1 A A 11 1_555 A U 29 1_555 -0.029 -0.067 0.318 2.921 -18.362 -4.099 11 A_A11:U29_A A 11 ? A 29 ? 20 1 1 A U 12 1_555 A G 28 1_555 2.147 -0.417 0.348 -2.452 -16.580 -1.080 12 A_U12:G28_A A 12 ? A 28 ? 28 1 1 A C 13 1_555 A G 27 1_555 0.492 -0.177 0.248 -0.358 -10.379 -0.943 13 A_C13:G27_A A 13 ? A 27 ? 19 1 1 A C 14 1_555 A G 26 1_555 0.428 -0.166 0.244 2.903 -10.497 -1.071 14 A_C14:G26_A A 14 ? A 26 ? 19 1 1 A A 15 1_555 A U 25 1_555 0.185 -0.023 0.031 2.059 -13.321 0.601 15 A_A15:U25_A A 15 ? A 25 ? 20 1 1 A U 16 1_555 A U 24 1_555 2.851 -1.496 0.038 -3.062 -7.907 -4.513 16 A_U16:U24_A A 16 ? A 24 ? 16 1 1 A U 17 1_555 A A 23 1_555 0.337 -0.123 -0.400 0.808 -12.475 9.646 17 A_U17:A23_A A 17 ? A 23 ? 20 1 1 A U 18 1_555 A A 22 1_555 5.389 0.053 1.082 -11.200 -8.453 53.567 18 A_U18:A22_A A 18 ? A 22 ? ? 5 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 43 1_555 A G 2 1_555 A C 42 1_555 -0.163 -1.908 3.310 -0.636 9.254 31.448 -4.871 0.187 2.659 16.627 1.143 32.754 1 AA_G1G2:C42C43_AA A 1 ? A 43 ? A 2 ? A 42 ? 1 A G 2 1_555 A C 42 1_555 A U 3 1_555 A A 41 1_555 0.063 -1.802 3.361 0.245 7.801 33.498 -4.228 -0.069 2.881 13.310 -0.417 34.370 2 AA_G2U3:A41C42_AA A 2 ? A 42 ? A 3 ? A 41 ? 1 A U 3 1_555 A A 41 1_555 A G 4 1_555 A C 40 1_555 0.084 -1.591 2.879 -0.440 10.911 30.345 -4.424 -0.215 2.189 20.046 0.808 32.206 3 AA_U3G4:C40A41_AA A 3 ? A 41 ? A 4 ? A 40 ? 1 A G 4 1_555 A C 40 1_555 A C 5 1_555 A G 39 1_555 0.016 -1.696 3.227 0.328 4.104 33.267 -3.587 0.024 3.002 7.134 -0.571 33.513 4 AA_G4C5:G39C40_AA A 4 ? A 40 ? A 5 ? A 39 ? 1 A C 5 1_555 A G 39 1_555 A U 6 1_555 A A 38 1_555 0.206 -1.837 3.050 1.087 6.644 28.015 -4.987 -0.203 2.561 13.480 -2.206 28.797 5 AA_C5U6:A38G39_AA A 5 ? A 39 ? A 6 ? A 38 ? 1 A U 6 1_555 A A 38 1_555 A G 7 1_555 A U 37 1_555 -0.029 -1.975 2.705 -3.394 11.836 21.115 -7.166 -0.648 1.402 29.305 8.404 24.408 6 AA_U6G7:U37A38_AA A 6 ? A 38 ? A 7 ? A 37 ? 1 A G 7 1_555 A U 37 1_555 A U 8 1_555 A A 36 1_555 0.034 -1.677 3.314 -0.335 4.992 38.789 -3.095 -0.090 3.083 7.478 0.502 39.098 7 AA_G7U8:A36U37_AA A 7 ? A 37 ? A 8 ? A 36 ? 1 A U 8 1_555 A A 36 1_555 A U 9 1_555 A U 31 1_555 6.616 0.038 2.771 -8.136 -8.619 83.863 0.183 -5.064 2.231 -6.421 6.061 84.542 8 AA_U8U9:U31A36_AA A 8 ? A 36 ? A 9 ? A 31 ? 1 A U 9 1_555 A U 31 1_555 A U 10 1_555 A G 30 1_555 0.883 -1.666 3.509 2.239 -1.806 57.167 -1.632 -0.789 3.585 -1.886 -2.338 57.233 9 AA_U9U10:G30U31_AA A 9 ? A 31 ? A 10 ? A 30 ? 1 A U 10 1_555 A G 30 1_555 A A 11 1_555 A U 29 1_555 0.210 -2.111 3.093 4.270 4.772 24.499 -6.051 0.624 2.638 11.007 -9.850 25.309 10 AA_U10A11:U29G30_AA A 10 ? A 30 ? A 11 ? A 29 ? 1 A A 11 1_555 A U 29 1_555 A U 12 1_555 A G 28 1_555 0.088 -1.663 3.333 1.101 2.683 40.957 -2.664 -0.005 3.224 3.828 -1.571 41.055 11 AA_A11U12:G28U29_AA A 11 ? A 29 ? A 12 ? A 28 ? 1 A U 12 1_555 A G 28 1_555 A C 13 1_555 A G 27 1_555 0.001 -2.072 2.894 3.405 8.143 22.768 -6.884 0.827 2.021 19.701 -8.240 24.397 12 AA_U12C13:G27G28_AA A 12 ? A 28 ? A 13 ? A 27 ? 1 A C 13 1_555 A G 27 1_555 A C 14 1_555 A G 26 1_555 0.107 -1.860 3.057 0.942 4.267 28.498 -4.587 -0.027 2.757 8.604 -1.900 28.825 13 AA_C13C14:G26G27_AA A 13 ? A 27 ? A 14 ? A 26 ? 1 A C 14 1_555 A G 26 1_555 A A 15 1_555 A U 25 1_555 0.070 -1.698 3.105 1.480 9.463 30.076 -4.664 0.111 2.470 17.681 -2.765 31.531 14 AA_C14A15:U25G26_AA A 14 ? A 26 ? A 15 ? A 25 ? 1 A A 15 1_555 A U 25 1_555 A U 16 1_555 A U 24 1_555 -0.254 -1.588 3.398 0.260 6.271 44.262 -2.666 0.358 3.155 8.274 -0.343 44.682 15 AA_A15U16:U24U25_AA A 15 ? A 25 ? A 16 ? A 24 ? 1 A U 16 1_555 A U 24 1_555 A U 17 1_555 A A 23 1_555 0.275 -2.168 2.969 8.209 10.879 16.008 -9.337 1.801 1.260 32.438 -24.476 20.994 16 AA_U16U17:A23U24_AA A 16 ? A 24 ? A 17 ? A 23 ? 1 A U 17 1_555 A A 23 1_555 A U 18 1_555 A A 22 1_555 2.478 -0.325 3.514 -5.035 10.698 44.009 -1.387 -3.660 3.072 13.978 6.579 45.493 17 AA_U17U18:A22A23_AA A 17 ? A 23 ? A 18 ? A 22 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'RO1 AI150830' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE II' ? Bruker 900 ? 2 'AVANCE II' ? Bruker 800 ? 3 'AVANCE NEO' ? Bruker 700 ? # _pdbx_soln_scatter.id 1 _pdbx_soln_scatter.type neutron _pdbx_soln_scatter.source_type 'APS BioCat 18ID beam line' _pdbx_soln_scatter.source_class Y _pdbx_soln_scatter.source_beamline APS _pdbx_soln_scatter.source_beamline_instrument 18ID _pdbx_soln_scatter.detector_type ? _pdbx_soln_scatter.detector_specific ? _pdbx_soln_scatter.temperature 298 _pdbx_soln_scatter.sample_pH 6.2 _pdbx_soln_scatter.num_time_frames ? _pdbx_soln_scatter.concentration_range 6-6.5 _pdbx_soln_scatter.buffer_name '20 mM Bis-Tris, 20 mM NaCl, pH 6.2' _pdbx_soln_scatter.data_reduction_software_list GNOM _pdbx_soln_scatter.data_analysis_software_list GNOM _pdbx_soln_scatter.mean_guiner_radius 2.1 _pdbx_soln_scatter.mean_guiner_radius_esd 0.1 _pdbx_soln_scatter.min_mean_cross_sectional_radii_gyration ? _pdbx_soln_scatter.min_mean_cross_sectional_radii_gyration_esd ? _pdbx_soln_scatter.max_mean_cross_sectional_radii_gyration ? _pdbx_soln_scatter.max_mean_cross_sectional_radii_gyration_esd ? _pdbx_soln_scatter.protein_length 6.9 _pdbx_soln_scatter.entry_id 7V06 # _pdbx_soln_scatter_model.scatter_id 1 _pdbx_soln_scatter_model.id 1 _pdbx_soln_scatter_model.method 'NMR, SAXS' _pdbx_soln_scatter_model.software_list 'NMRpipe, NMRViewJ ,X-PLOR_NIH, AMBER, GNOM' _pdbx_soln_scatter_model.software_author_list 'Frank Delaglio; Ad Bax; Bruce Johnson; Charles Schwieters; Marius Clore; David Case; Dmitry Svergun' _pdbx_soln_scatter_model.entry_fitting_list ? _pdbx_soln_scatter_model.num_conformers_calculated 1024 _pdbx_soln_scatter_model.num_conformers_submitted 10 _pdbx_soln_scatter_model.conformer_selection_criteria 'Lowest energy' _pdbx_soln_scatter_model.details ? _pdbx_soln_scatter_model.representative_conformer 10 # _atom_sites.entry_id 7V06 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_