HEADER LYASE 10-MAY-22 7V0F TITLE STRUCTURE OF 6-CARBOXY-5,6,7,8-TETRAHYDROPTERIN SYNTHASE PARALOG QUED2 TITLE 2 FROM ACINETOBACTER BAUMANNII COMPND MOL_ID: 1; COMPND 2 MOLECULE: 6-CARBOXY-5,6,7,8-TETRAHYDROPTERIN SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: QUEUOSINE BIOSYNTHESIS PROTEIN QUED; COMPND 5 EC: 4.1.2.50; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII ATCC 17978; SOURCE 3 ORGANISM_TAXID: 400667; SOURCE 4 GENE: A7M90_11685, AB945B12_03522, ABA9201_05020, ABCAM1_1682, SOURCE 5 ABKPCSM17A_00528, ABR2091_1604, ACX61_10285, APC21_11720, SOURCE 6 APD31_06340, AUO97_15390, B9X95_12070, C2U32_04285, CBE85_10595, SOURCE 7 DOL94_12095, E1A86_09590, E1A87_16305, EA706_07350, EA722_05115, SOURCE 8 EGM95_11990, EKS29_14165, EWO96_00585, F2P40_09185, FGL68_05460, SOURCE 9 FJU36_05345, FQK04_11425, FR761_08970, G3N53_00580, GSE42_09090, SOURCE 10 GUK62_05625, H0529_06425, HB367_04620, IMO23_08060, ITE13_09665, SOURCE 11 SAMEA104305318_01743, SAMEA104305385_02424, SI89_17865; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS QUEUOSINE, TRANSFER RNA, TRANSLATION ELONGATION, ZN METALLOENZYME, KEYWDS 2 NUTRITIONAL IMMUNITY, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.R.JORDAN,G.GONZALEZ-GUTIERREZ,D.P.GIEDROC REVDAT 2 22-MAY-24 7V0F 1 REMARK REVDAT 1 07-DEC-22 7V0F 0 JRNL AUTH M.R.JORDAN,G.GONZALEZ-GUTIERREZ,J.C.TRINIDAD,D.P.GIEDROC JRNL TITL METAL RETENTION AND REPLACEMENT IN QUED2 PROTECT JRNL TITL 2 QUEUOSINE-TRNA BIOSYNTHESIS IN METAL-STARVED ACINETOBACTER JRNL TITL 3 BAUMANNII. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 30119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 36442121 JRNL DOI 10.1073/PNAS.2213630119 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 17637 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.880 REMARK 3 FREE R VALUE TEST SET COUNT : 2037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6400 - 5.8000 0.99 2192 141 0.1924 0.1986 REMARK 3 2 5.7900 - 4.6000 1.00 2182 126 0.1836 0.2038 REMARK 3 3 4.6000 - 4.0200 1.00 2161 158 0.1816 0.2345 REMARK 3 4 4.0200 - 3.6500 0.97 2120 128 0.2360 0.2827 REMARK 3 5 3.6500 - 3.3900 0.98 2211 83 0.2410 0.3451 REMARK 3 6 3.3900 - 3.1900 1.00 2159 153 0.2444 0.3067 REMARK 3 7 3.1900 - 3.0300 1.00 2165 133 0.2671 0.2992 REMARK 3 8 3.0300 - 2.9000 1.00 2181 168 0.2943 0.3080 REMARK 3 9 2.9000 - 2.7900 1.00 2194 140 0.2880 0.3016 REMARK 3 10 2.7900 - 2.6900 1.00 2162 132 0.3017 0.3006 REMARK 3 11 2.6900 - 2.6100 0.99 2150 153 0.3091 0.3501 REMARK 3 12 2.6100 - 2.5300 0.99 2197 123 0.3257 0.3334 REMARK 3 13 2.5300 - 2.4700 1.00 2224 130 0.3358 0.4125 REMARK 3 14 2.4700 - 2.4100 1.00 2152 145 0.3505 0.4231 REMARK 3 15 2.4100 - 2.3500 0.99 2172 124 0.3647 0.4503 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.376 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.253 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2944 REMARK 3 ANGLE : 1.101 3965 REMARK 3 CHIRALITY : 0.059 423 REMARK 3 PLANARITY : 0.009 507 REMARK 3 DIHEDRAL : 0.000 0 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2594 -44.1680 -18.0733 REMARK 3 T TENSOR REMARK 3 T11: 0.2485 T22: 0.2887 REMARK 3 T33: 0.5081 T12: -0.0277 REMARK 3 T13: 0.0800 T23: 0.0528 REMARK 3 L TENSOR REMARK 3 L11: 5.0912 L22: 7.4544 REMARK 3 L33: 4.2942 L12: -2.8182 REMARK 3 L13: 2.0266 L23: -2.6034 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: -0.2578 S13: 0.5583 REMARK 3 S21: -0.0208 S22: -0.2091 S23: -0.1658 REMARK 3 S31: -0.0781 S32: 0.1230 S33: 0.1823 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1498 -16.3395 -17.6706 REMARK 3 T TENSOR REMARK 3 T11: 0.6092 T22: 0.8468 REMARK 3 T33: 1.1199 T12: 0.3026 REMARK 3 T13: 0.0649 T23: 0.1288 REMARK 3 L TENSOR REMARK 3 L11: 9.5124 L22: 5.4033 REMARK 3 L33: 8.9218 L12: 3.9465 REMARK 3 L13: -2.2018 L23: 1.2031 REMARK 3 S TENSOR REMARK 3 S11: -0.4462 S12: 0.3687 S13: 0.6245 REMARK 3 S21: 0.2001 S22: 0.3651 S23: 2.6662 REMARK 3 S31: -1.2506 S32: -0.9020 S33: -0.0587 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7344 -50.0267 -15.9880 REMARK 3 T TENSOR REMARK 3 T11: 0.2505 T22: 0.4452 REMARK 3 T33: 0.6099 T12: 0.0247 REMARK 3 T13: 0.1362 T23: 0.0566 REMARK 3 L TENSOR REMARK 3 L11: 3.5559 L22: 7.7419 REMARK 3 L33: 3.0615 L12: -0.7290 REMARK 3 L13: 0.9327 L23: -2.3176 REMARK 3 S TENSOR REMARK 3 S11: -0.0650 S12: -0.3094 S13: -0.6791 REMARK 3 S21: 0.4825 S22: 0.3114 S23: 0.9958 REMARK 3 S31: 0.1161 S32: -0.2278 S33: -0.2934 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2206 -38.6044 -17.9881 REMARK 3 T TENSOR REMARK 3 T11: 0.2781 T22: 0.3322 REMARK 3 T33: 0.6789 T12: -0.0156 REMARK 3 T13: 0.1019 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 4.2236 L22: 2.8175 REMARK 3 L33: 3.5129 L12: 0.4850 REMARK 3 L13: -0.3856 L23: 1.2852 REMARK 3 S TENSOR REMARK 3 S11: -0.0862 S12: -0.1049 S13: 0.1890 REMARK 3 S21: 0.1004 S22: -0.0569 S23: 1.0384 REMARK 3 S31: -0.2945 S32: -0.2038 S33: 0.1226 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4338 -42.3304 -10.6179 REMARK 3 T TENSOR REMARK 3 T11: 0.2784 T22: 0.3837 REMARK 3 T33: 0.3809 T12: 0.0301 REMARK 3 T13: 0.0826 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 5.5642 L22: 7.1064 REMARK 3 L33: 5.0728 L12: 1.0711 REMARK 3 L13: 0.7530 L23: 0.3058 REMARK 3 S TENSOR REMARK 3 S11: 0.0074 S12: -0.6717 S13: -0.1773 REMARK 3 S21: 0.9487 S22: -0.0573 S23: 0.4411 REMARK 3 S31: -0.1276 S32: -0.0096 S33: 0.0328 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5649 -46.5820 -12.8426 REMARK 3 T TENSOR REMARK 3 T11: 0.3879 T22: 0.5509 REMARK 3 T33: 0.8419 T12: -0.0211 REMARK 3 T13: 0.1957 T23: -0.0252 REMARK 3 L TENSOR REMARK 3 L11: 3.2715 L22: 5.6007 REMARK 3 L33: 0.7796 L12: 1.5293 REMARK 3 L13: 0.4953 L23: -0.4958 REMARK 3 S TENSOR REMARK 3 S11: 0.2101 S12: -0.7634 S13: -0.1762 REMARK 3 S21: 0.7232 S22: -0.2244 S23: 1.0972 REMARK 3 S31: 0.2010 S32: -0.2550 S33: 0.0075 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0523 -31.6369 -39.0090 REMARK 3 T TENSOR REMARK 3 T11: 0.4654 T22: 0.4982 REMARK 3 T33: 0.3773 T12: 0.0077 REMARK 3 T13: -0.1376 T23: 0.1520 REMARK 3 L TENSOR REMARK 3 L11: 4.5873 L22: 4.4744 REMARK 3 L33: 5.7642 L12: -0.1112 REMARK 3 L13: -1.1037 L23: -0.4156 REMARK 3 S TENSOR REMARK 3 S11: 0.3505 S12: 0.8251 S13: 0.1303 REMARK 3 S21: -0.5247 S22: 0.0168 S23: 0.6725 REMARK 3 S31: -0.1431 S32: -0.4554 S33: -0.1976 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.3157 -15.4017 -44.5892 REMARK 3 T TENSOR REMARK 3 T11: 1.1993 T22: 1.1945 REMARK 3 T33: 1.1297 T12: -0.1565 REMARK 3 T13: -0.0321 T23: 0.2462 REMARK 3 L TENSOR REMARK 3 L11: 3.1645 L22: 0.5442 REMARK 3 L33: 7.5128 L12: -1.5154 REMARK 3 L13: -4.9462 L23: 2.2204 REMARK 3 S TENSOR REMARK 3 S11: 0.7302 S12: 0.5780 S13: 1.0888 REMARK 3 S21: -0.1283 S22: -0.0288 S23: -0.0062 REMARK 3 S31: -1.4960 S32: -0.6096 S33: -0.6079 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 55 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0539 -24.5512 -37.2599 REMARK 3 T TENSOR REMARK 3 T11: 0.6617 T22: 0.7179 REMARK 3 T33: 0.9390 T12: 0.1719 REMARK 3 T13: -0.1106 T23: 0.3161 REMARK 3 L TENSOR REMARK 3 L11: 3.6794 L22: 2.6585 REMARK 3 L33: 5.2818 L12: -1.7889 REMARK 3 L13: -0.0123 L23: -0.9192 REMARK 3 S TENSOR REMARK 3 S11: 0.3213 S12: 0.9382 S13: 0.9980 REMARK 3 S21: -0.0867 S22: 0.0762 S23: 0.9691 REMARK 3 S31: -0.3995 S32: -1.0521 S33: -0.3470 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3425 -24.4564 -45.6216 REMARK 3 T TENSOR REMARK 3 T11: 0.8269 T22: 0.7125 REMARK 3 T33: 0.6181 T12: 0.0392 REMARK 3 T13: -0.2992 T23: 0.2841 REMARK 3 L TENSOR REMARK 3 L11: 3.9676 L22: 3.7650 REMARK 3 L33: 4.5659 L12: 0.8765 REMARK 3 L13: -1.2241 L23: -1.5226 REMARK 3 S TENSOR REMARK 3 S11: -0.1478 S12: 0.9657 S13: 0.8971 REMARK 3 S21: -0.6448 S22: 0.2364 S23: 0.6953 REMARK 3 S31: -0.9314 S32: -0.6331 S33: -0.1478 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7V0F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000264934. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003,1.27819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17654 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 42.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.48100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS 0.1 M PH 6.5, 0.2 M NAF AND REMARK 280 18-20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.03000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.03000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.21000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.03000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.03000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.21000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 42.03000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 42.03000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 61.21000 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 42.03000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 42.03000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 61.21000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 29890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -665.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 84.06000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -84.06000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -84.06000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 84.06000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 401 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 THR A 118 REMARK 465 VAL A 119 REMARK 465 THR A 120 REMARK 465 GLN A 121 REMARK 465 ASN A 122 REMARK 465 GLY A 123 REMARK 465 GLU A 124 REMARK 465 GLY A 125 REMARK 465 PRO A 190 REMARK 465 HIS A 191 REMARK 465 VAL A 192 REMARK 465 ASN A 193 REMARK 465 LEU A 194 REMARK 465 GLN A 195 REMARK 465 VAL A 196 REMARK 465 GLU A 197 REMARK 465 VAL A 198 REMARK 465 SER B -1 REMARK 465 ASN B 17 REMARK 465 CYS B 18 REMARK 465 THR B 19 REMARK 465 SER B 20 REMARK 465 ASP B 21 REMARK 465 ARG B 22 REMARK 465 CYS B 23 REMARK 465 GLN B 116 REMARK 465 SER B 117 REMARK 465 THR B 118 REMARK 465 VAL B 119 REMARK 465 THR B 120 REMARK 465 GLN B 121 REMARK 465 ASN B 122 REMARK 465 GLY B 123 REMARK 465 GLU B 124 REMARK 465 GLY B 125 REMARK 465 LYS B 186 REMARK 465 PHE B 187 REMARK 465 HIS B 188 REMARK 465 ASN B 189 REMARK 465 PRO B 190 REMARK 465 HIS B 191 REMARK 465 VAL B 192 REMARK 465 ASN B 193 REMARK 465 LEU B 194 REMARK 465 GLN B 195 REMARK 465 VAL B 196 REMARK 465 GLU B 197 REMARK 465 VAL B 198 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 4 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 54 CG CD1 CD2 REMARK 470 TYR B 80 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 416 O HOH A 424 4655 1.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 43 58.22 -102.43 REMARK 500 SER A 131 149.37 -172.68 REMARK 500 THR A 137 -130.70 38.36 REMARK 500 THR B 137 -127.32 36.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 18 SG REMARK 620 2 CYS A 23 SG 148.3 REMARK 620 3 HIS A 45 NE2 101.1 91.8 REMARK 620 4 HIS A 188 NE2 99.8 91.5 3.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 28 ND1 REMARK 620 2 HIS A 30 NE2 139.9 REMARK 620 3 HOH A 416 O 81.0 90.8 REMARK 620 4 HOH A 424 O 97.9 108.8 54.3 REMARK 620 5 HIS B 68 NE2 94.1 106.5 157.4 105.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 68 NE2 REMARK 620 2 HIS B 28 ND1 97.2 REMARK 620 3 HIS B 30 NE2 102.0 128.7 REMARK 620 4 HOH B 304 O 175.5 79.0 78.8 REMARK 620 5 HOH B 305 O 116.6 100.0 112.4 66.7 REMARK 620 N 1 2 3 4 DBREF1 7V0F A 1 198 UNP A0A081GYS3_ACIBA DBREF2 7V0F A A0A081GYS3 1 198 DBREF1 7V0F B 1 198 UNP A0A081GYS3_ACIBA DBREF2 7V0F B A0A081GYS3 1 198 SEQADV 7V0F SER A -1 UNP A0A081GYS EXPRESSION TAG SEQADV 7V0F HIS A 0 UNP A0A081GYS EXPRESSION TAG SEQADV 7V0F SER B -1 UNP A0A081GYS EXPRESSION TAG SEQADV 7V0F HIS B 0 UNP A0A081GYS EXPRESSION TAG SEQRES 1 A 200 SER HIS MET LEU ILE ARG LYS LEU PHE LYS PHE GLU ASN SEQRES 2 A 200 ALA HIS VAL VAL ARG ASN CYS THR SER ASP ARG CYS LYS SEQRES 3 A 200 ARG SER ILE HIS GLY HIS SER TYR LYS VAL GLU LEU LEU SEQRES 4 A 200 LEU LYS ALA SER LYS LEU ASP HIS GLY GLN MET VAL TYR SEQRES 5 A 200 ASP PHE GLY LEU LEU LYS GLY VAL ILE LYS ASP LEU PHE SEQRES 6 A 200 ASP SER PHE ASP HIS ALA ILE CYS PHE TRP GLU LYS ASP SEQRES 7 A 200 ASP PRO GLN TYR ILE ASP ALA CYS LYS THR PHE SER ALA SEQRES 8 A 200 ARG TRP ILE SER LEU PRO VAL SER PRO SER ALA GLU GLN SEQRES 9 A 200 PHE SER ARG ILE PHE PHE TYR LEU ALA GLN GLN VAL LEU SEQRES 10 A 200 GLN SER THR VAL THR GLN ASN GLY GLU GLY ASP VAL GLU SEQRES 11 A 200 VAL TYR SER VAL ILE VAL HIS GLU THR ASP THR GLY TYR SEQRES 12 A 200 ALA GLN SER PHE LEU GLU ASP ILE GLN ASN GLU GLN MET SEQRES 13 A 200 GLY LEU LEU ASN LEU GLU GLY ILE ILE PHE SER GLU GLN SEQRES 14 A 200 VAL GLN SER GLU TRP ALA ASP PRO ASN MET TYR GLU ASN SEQRES 15 A 200 LEU LYS GLN GLY ILE LYS PHE HIS ASN PRO HIS VAL ASN SEQRES 16 A 200 LEU GLN VAL GLU VAL SEQRES 1 B 200 SER HIS MET LEU ILE ARG LYS LEU PHE LYS PHE GLU ASN SEQRES 2 B 200 ALA HIS VAL VAL ARG ASN CYS THR SER ASP ARG CYS LYS SEQRES 3 B 200 ARG SER ILE HIS GLY HIS SER TYR LYS VAL GLU LEU LEU SEQRES 4 B 200 LEU LYS ALA SER LYS LEU ASP HIS GLY GLN MET VAL TYR SEQRES 5 B 200 ASP PHE GLY LEU LEU LYS GLY VAL ILE LYS ASP LEU PHE SEQRES 6 B 200 ASP SER PHE ASP HIS ALA ILE CYS PHE TRP GLU LYS ASP SEQRES 7 B 200 ASP PRO GLN TYR ILE ASP ALA CYS LYS THR PHE SER ALA SEQRES 8 B 200 ARG TRP ILE SER LEU PRO VAL SER PRO SER ALA GLU GLN SEQRES 9 B 200 PHE SER ARG ILE PHE PHE TYR LEU ALA GLN GLN VAL LEU SEQRES 10 B 200 GLN SER THR VAL THR GLN ASN GLY GLU GLY ASP VAL GLU SEQRES 11 B 200 VAL TYR SER VAL ILE VAL HIS GLU THR ASP THR GLY TYR SEQRES 12 B 200 ALA GLN SER PHE LEU GLU ASP ILE GLN ASN GLU GLN MET SEQRES 13 B 200 GLY LEU LEU ASN LEU GLU GLY ILE ILE PHE SER GLU GLN SEQRES 14 B 200 VAL GLN SER GLU TRP ALA ASP PRO ASN MET TYR GLU ASN SEQRES 15 B 200 LEU LYS GLN GLY ILE LYS PHE HIS ASN PRO HIS VAL ASN SEQRES 16 B 200 LEU GLN VAL GLU VAL HET EDO A 301 4 HET ZN A 302 1 HET ZN A 303 1 HET PEG A 304 7 HET ZN B 201 1 HET ZN B 202 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM ZN ZINC ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO C2 H6 O2 FORMUL 4 ZN 4(ZN 2+) FORMUL 6 PEG C4 H10 O3 FORMUL 9 HOH *34(H2 O) HELIX 1 AA1 ASP A 44 MET A 48 5 5 HELIX 2 AA2 GLY A 53 SER A 65 1 13 HELIX 3 AA3 ASP A 77 SER A 88 1 12 HELIX 4 AA4 SER A 99 LEU A 115 1 17 HELIX 5 AA5 PHE A 145 GLN A 150 1 6 HELIX 6 AA6 ASN A 158 ILE A 162 5 5 HELIX 7 AA7 SER A 165 GLU A 171 1 7 HELIX 8 AA8 ASN A 176 GLN A 183 1 8 HELIX 9 AA9 ASP B 44 MET B 48 5 5 HELIX 10 AB1 LEU B 54 SER B 65 1 12 HELIX 11 AB2 ASP B 77 SER B 88 1 12 HELIX 12 AB3 SER B 99 LEU B 115 1 17 HELIX 13 AB4 PHE B 145 GLN B 150 1 6 HELIX 14 AB5 ASN B 158 ILE B 162 5 5 HELIX 15 AB6 SER B 165 GLU B 171 1 7 HELIX 16 AB7 ASN B 176 LYS B 182 1 7 SHEET 1 AA1 7 GLY A 140 SER A 144 0 SHEET 2 AA1 7 VAL A 127 GLU A 136 -1 N GLU A 136 O GLY A 140 SHEET 3 AA1 7 SER A 26 ALA A 40 -1 N LEU A 37 O TYR A 130 SHEET 4 AA1 7 MET A 1 VAL A 15 -1 N ILE A 3 O LEU A 38 SHEET 5 AA1 7 ALA A 69 TRP A 73 1 O CYS A 71 N ALA A 12 SHEET 6 AA1 7 TRP A 91 LEU A 94 1 O ILE A 92 N ILE A 70 SHEET 7 AA1 7 ILE A 163 PHE A 164 -1 O ILE A 163 N SER A 93 SHEET 1 AA2 7 GLY B 140 SER B 144 0 SHEET 2 AA2 7 VAL B 127 GLU B 136 -1 N VAL B 134 O ALA B 142 SHEET 3 AA2 7 SER B 26 ALA B 40 -1 N LEU B 37 O SER B 131 SHEET 4 AA2 7 MET B 1 VAL B 15 -1 N PHE B 7 O VAL B 34 SHEET 5 AA2 7 ILE B 70 TRP B 73 1 O CYS B 71 N ALA B 12 SHEET 6 AA2 7 TRP B 91 LEU B 94 1 O LEU B 94 N PHE B 72 SHEET 7 AA2 7 ILE B 163 PHE B 164 -1 O ILE B 163 N SER B 93 LINK SG CYS A 18 ZN ZN A 303 1555 4655 2.33 LINK SG CYS A 23 ZN ZN A 303 1555 4655 2.29 LINK ND1 HIS A 28 ZN ZN A 302 1555 1555 2.29 LINK NE2 HIS A 30 ZN ZN A 302 1555 1555 2.17 LINK NE2 HIS A 45 ZN ZN A 303 1555 1555 2.06 LINK NE2 HIS A 68 ZN ZN B 201 1555 1555 2.25 LINK NE2 HIS A 188 ZN ZN A 303 1555 1555 2.15 LINK ZN ZN A 302 O HOH A 416 1555 1555 2.05 LINK ZN ZN A 302 O HOH A 424 1555 4655 2.04 LINK ZN ZN A 302 NE2 HIS B 68 1555 1555 2.27 LINK ND1 HIS B 28 ZN ZN B 201 1555 1555 2.29 LINK NE2 HIS B 30 ZN ZN B 201 1555 1555 2.23 LINK NE2 HIS B 45 ZN ZN B 202 1555 1555 2.33 LINK ZN ZN B 201 O HOH B 304 1555 1555 2.03 LINK ZN ZN B 201 O HOH B 305 1555 1555 2.12 CRYST1 84.060 84.060 122.420 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011896 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011896 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008169 0.00000