data_7V27 # _entry.id 7V27 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7V27 pdb_00007v27 10.2210/pdb7v27/pdb WWPDB D_1300022018 ? ? EMDB EMD-31638 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-08-10 2 'Structure model' 1 1 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' em_admin 4 2 'Structure model' pdbx_entry_details 5 2 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_em_admin.last_update' 2 2 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7V27 _pdbx_database_status.recvd_initial_deposition_date 2021-08-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'RBD/XG005 local refinement' EMD-31638 'associated EM volume' EMDB . EMD-31637 'other EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhan, W.Q.' 1 ? 'Zhang, X.' 2 ? 'Sun, L.' 3 ? 'Chen, Z.G.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'RBD/XG005 local refinement' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Zhan, W.Q.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 21772.391 1 ? ? ? ? 2 polymer man XG005-VH 13123.893 1 ? ? ? ? 3 polymer man XG005-VL 11364.456 1 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; C ? 2 'polypeptide(L)' no no ;QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQV VLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSS ; ;QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQV VLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSS ; B ? 3 'polypeptide(L)' no no ;QSALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGL QAEDEADYYCSSYTTTSVVFGGGTKLTVL ; ;QSALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGL QAEDEADYYCSSYTTTSVVFGGGTKLTVL ; A ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 LEU n 1 3 CYS n 1 4 PRO n 1 5 PHE n 1 6 GLY n 1 7 GLU n 1 8 VAL n 1 9 PHE n 1 10 ASN n 1 11 ALA n 1 12 THR n 1 13 ARG n 1 14 PHE n 1 15 ALA n 1 16 SER n 1 17 VAL n 1 18 TYR n 1 19 ALA n 1 20 TRP n 1 21 ASN n 1 22 ARG n 1 23 LYS n 1 24 ARG n 1 25 ILE n 1 26 SER n 1 27 ASN n 1 28 CYS n 1 29 VAL n 1 30 ALA n 1 31 ASP n 1 32 TYR n 1 33 SER n 1 34 VAL n 1 35 LEU n 1 36 TYR n 1 37 ASN n 1 38 SER n 1 39 ALA n 1 40 SER n 1 41 PHE n 1 42 SER n 1 43 THR n 1 44 PHE n 1 45 LYS n 1 46 CYS n 1 47 TYR n 1 48 GLY n 1 49 VAL n 1 50 SER n 1 51 PRO n 1 52 THR n 1 53 LYS n 1 54 LEU n 1 55 ASN n 1 56 ASP n 1 57 LEU n 1 58 CYS n 1 59 PHE n 1 60 THR n 1 61 ASN n 1 62 VAL n 1 63 TYR n 1 64 ALA n 1 65 ASP n 1 66 SER n 1 67 PHE n 1 68 VAL n 1 69 ILE n 1 70 ARG n 1 71 GLY n 1 72 ASP n 1 73 GLU n 1 74 VAL n 1 75 ARG n 1 76 GLN n 1 77 ILE n 1 78 ALA n 1 79 PRO n 1 80 GLY n 1 81 GLN n 1 82 THR n 1 83 GLY n 1 84 LYS n 1 85 ILE n 1 86 ALA n 1 87 ASP n 1 88 TYR n 1 89 ASN n 1 90 TYR n 1 91 LYS n 1 92 LEU n 1 93 PRO n 1 94 ASP n 1 95 ASP n 1 96 PHE n 1 97 THR n 1 98 GLY n 1 99 CYS n 1 100 VAL n 1 101 ILE n 1 102 ALA n 1 103 TRP n 1 104 ASN n 1 105 SER n 1 106 ASN n 1 107 ASN n 1 108 LEU n 1 109 ASP n 1 110 SER n 1 111 LYS n 1 112 VAL n 1 113 GLY n 1 114 GLY n 1 115 ASN n 1 116 TYR n 1 117 ASN n 1 118 TYR n 1 119 LEU n 1 120 TYR n 1 121 ARG n 1 122 LEU n 1 123 PHE n 1 124 ARG n 1 125 LYS n 1 126 SER n 1 127 ASN n 1 128 LEU n 1 129 LYS n 1 130 PRO n 1 131 PHE n 1 132 GLU n 1 133 ARG n 1 134 ASP n 1 135 ILE n 1 136 SER n 1 137 THR n 1 138 GLU n 1 139 ILE n 1 140 TYR n 1 141 GLN n 1 142 ALA n 1 143 GLY n 1 144 SER n 1 145 THR n 1 146 PRO n 1 147 CYS n 1 148 ASN n 1 149 GLY n 1 150 VAL n 1 151 GLU n 1 152 GLY n 1 153 PHE n 1 154 ASN n 1 155 CYS n 1 156 TYR n 1 157 PHE n 1 158 PRO n 1 159 LEU n 1 160 GLN n 1 161 SER n 1 162 TYR n 1 163 GLY n 1 164 PHE n 1 165 GLN n 1 166 PRO n 1 167 THR n 1 168 ASN n 1 169 GLY n 1 170 VAL n 1 171 GLY n 1 172 TYR n 1 173 GLN n 1 174 PRO n 1 175 TYR n 1 176 ARG n 1 177 VAL n 1 178 VAL n 1 179 VAL n 1 180 LEU n 1 181 SER n 1 182 PHE n 1 183 GLU n 1 184 LEU n 1 185 LEU n 1 186 HIS n 1 187 ALA n 1 188 PRO n 1 189 ALA n 1 190 THR n 1 191 VAL n 1 192 CYS n 1 193 GLY n 1 194 PRO n 2 1 GLN n 2 2 VAL n 2 3 THR n 2 4 LEU n 2 5 ARG n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 PRO n 2 10 THR n 2 11 LEU n 2 12 VAL n 2 13 LYS n 2 14 PRO n 2 15 LYS n 2 16 GLN n 2 17 THR n 2 18 LEU n 2 19 THR n 2 20 LEU n 2 21 THR n 2 22 CYS n 2 23 THR n 2 24 PHE n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 SER n 2 29 LEU n 2 30 SER n 2 31 THR n 2 32 PRO n 2 33 GLY n 2 34 GLY n 2 35 GLY n 2 36 VAL n 2 37 GLY n 2 38 TRP n 2 39 ILE n 2 40 ARG n 2 41 GLN n 2 42 PRO n 2 43 PRO n 2 44 GLY n 2 45 LYS n 2 46 ALA n 2 47 LEU n 2 48 GLU n 2 49 TRP n 2 50 LEU n 2 51 ALA n 2 52 LEU n 2 53 ILE n 2 54 TYR n 2 55 TRP n 2 56 ASP n 2 57 ASP n 2 58 ASP n 2 59 LYS n 2 60 ARG n 2 61 TYR n 2 62 SER n 2 63 PRO n 2 64 SER n 2 65 LEU n 2 66 LYS n 2 67 SER n 2 68 SER n 2 69 LEU n 2 70 THR n 2 71 ILE n 2 72 THR n 2 73 LYS n 2 74 ASP n 2 75 THR n 2 76 SER n 2 77 LYS n 2 78 ASN n 2 79 GLN n 2 80 VAL n 2 81 VAL n 2 82 LEU n 2 83 THR n 2 84 MET n 2 85 THR n 2 86 ASN n 2 87 MET n 2 88 ASP n 2 89 PRO n 2 90 VAL n 2 91 ASP n 2 92 THR n 2 93 ALA n 2 94 THR n 2 95 TYR n 2 96 TYR n 2 97 CYS n 2 98 ALA n 2 99 ARG n 2 100 LEU n 2 101 THR n 2 102 ALA n 2 103 ALA n 2 104 ASP n 2 105 THR n 2 106 ILE n 2 107 PHE n 2 108 ASP n 2 109 CYS n 2 110 TRP n 2 111 GLY n 2 112 GLN n 2 113 GLY n 2 114 THR n 2 115 LEU n 2 116 VAL n 2 117 THR n 2 118 VAL n 2 119 SER n 2 120 SER n 3 1 GLN n 3 2 SER n 3 3 ALA n 3 4 LEU n 3 5 THR n 3 6 GLN n 3 7 PRO n 3 8 ALA n 3 9 SER n 3 10 VAL n 3 11 SER n 3 12 GLY n 3 13 SER n 3 14 PRO n 3 15 GLY n 3 16 LEU n 3 17 SER n 3 18 ILE n 3 19 THR n 3 20 ILE n 3 21 SER n 3 22 CYS n 3 23 THR n 3 24 ALA n 3 25 THR n 3 26 SER n 3 27 SER n 3 28 ASP n 3 29 VAL n 3 30 GLY n 3 31 ALA n 3 32 TYR n 3 33 ASN n 3 34 TYR n 3 35 VAL n 3 36 SER n 3 37 TRP n 3 38 TYR n 3 39 GLN n 3 40 GLN n 3 41 HIS n 3 42 PRO n 3 43 GLY n 3 44 GLN n 3 45 ALA n 3 46 PRO n 3 47 LYS n 3 48 LEU n 3 49 MET n 3 50 ILE n 3 51 TYR n 3 52 ASP n 3 53 VAL n 3 54 SER n 3 55 LYS n 3 56 ARG n 3 57 PRO n 3 58 SER n 3 59 GLY n 3 60 VAL n 3 61 SER n 3 62 ASN n 3 63 ARG n 3 64 PHE n 3 65 SER n 3 66 GLY n 3 67 SER n 3 68 LYS n 3 69 SER n 3 70 ALA n 3 71 ASN n 3 72 THR n 3 73 ALA n 3 74 SER n 3 75 LEU n 3 76 THR n 3 77 ILE n 3 78 SER n 3 79 GLY n 3 80 LEU n 3 81 GLN n 3 82 ALA n 3 83 GLU n 3 84 ASP n 3 85 GLU n 3 86 ALA n 3 87 ASP n 3 88 TYR n 3 89 TYR n 3 90 CYS n 3 91 SER n 3 92 SER n 3 93 TYR n 3 94 THR n 3 95 THR n 3 96 THR n 3 97 SER n 3 98 VAL n 3 99 VAL n 3 100 PHE n 3 101 GLY n 3 102 GLY n 3 103 GLY n 3 104 THR n 3 105 LYS n 3 106 LEU n 3 107 THR n 3 108 VAL n 3 109 LEU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 194 2019-nCoV ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293T ? ? ? ? ? ? ? ? ? pcDNA3.1 ? ? 2 1 sample 'Biological sequence' 1 120 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293T ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 109 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293T ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 334 334 ASN ASN C . n A 1 2 LEU 2 335 335 LEU LEU C . n A 1 3 CYS 3 336 336 CYS CYS C . n A 1 4 PRO 4 337 337 PRO PRO C . n A 1 5 PHE 5 338 338 PHE PHE C . n A 1 6 GLY 6 339 339 GLY GLY C . n A 1 7 GLU 7 340 340 GLU GLU C . n A 1 8 VAL 8 341 341 VAL VAL C . n A 1 9 PHE 9 342 342 PHE PHE C . n A 1 10 ASN 10 343 343 ASN ASN C . n A 1 11 ALA 11 344 344 ALA ALA C . n A 1 12 THR 12 345 345 THR THR C . n A 1 13 ARG 13 346 346 ARG ARG C . n A 1 14 PHE 14 347 347 PHE PHE C . n A 1 15 ALA 15 348 348 ALA ALA C . n A 1 16 SER 16 349 349 SER SER C . n A 1 17 VAL 17 350 350 VAL VAL C . n A 1 18 TYR 18 351 351 TYR TYR C . n A 1 19 ALA 19 352 352 ALA ALA C . n A 1 20 TRP 20 353 353 TRP TRP C . n A 1 21 ASN 21 354 354 ASN ASN C . n A 1 22 ARG 22 355 355 ARG ARG C . n A 1 23 LYS 23 356 356 LYS LYS C . n A 1 24 ARG 24 357 357 ARG ARG C . n A 1 25 ILE 25 358 358 ILE ILE C . n A 1 26 SER 26 359 359 SER SER C . n A 1 27 ASN 27 360 360 ASN ASN C . n A 1 28 CYS 28 361 361 CYS CYS C . n A 1 29 VAL 29 362 362 VAL VAL C . n A 1 30 ALA 30 363 363 ALA ALA C . n A 1 31 ASP 31 364 364 ASP ASP C . n A 1 32 TYR 32 365 365 TYR TYR C . n A 1 33 SER 33 366 366 SER SER C . n A 1 34 VAL 34 367 367 VAL VAL C . n A 1 35 LEU 35 368 368 LEU LEU C . n A 1 36 TYR 36 369 369 TYR TYR C . n A 1 37 ASN 37 370 370 ASN ASN C . n A 1 38 SER 38 371 371 SER SER C . n A 1 39 ALA 39 372 372 ALA ALA C . n A 1 40 SER 40 373 373 SER SER C . n A 1 41 PHE 41 374 374 PHE PHE C . n A 1 42 SER 42 375 375 SER SER C . n A 1 43 THR 43 376 376 THR THR C . n A 1 44 PHE 44 377 377 PHE PHE C . n A 1 45 LYS 45 378 378 LYS LYS C . n A 1 46 CYS 46 379 379 CYS CYS C . n A 1 47 TYR 47 380 380 TYR TYR C . n A 1 48 GLY 48 381 381 GLY GLY C . n A 1 49 VAL 49 382 382 VAL VAL C . n A 1 50 SER 50 383 383 SER SER C . n A 1 51 PRO 51 384 384 PRO PRO C . n A 1 52 THR 52 385 385 THR THR C . n A 1 53 LYS 53 386 386 LYS LYS C . n A 1 54 LEU 54 387 387 LEU LEU C . n A 1 55 ASN 55 388 388 ASN ASN C . n A 1 56 ASP 56 389 389 ASP ASP C . n A 1 57 LEU 57 390 390 LEU LEU C . n A 1 58 CYS 58 391 391 CYS CYS C . n A 1 59 PHE 59 392 392 PHE PHE C . n A 1 60 THR 60 393 393 THR THR C . n A 1 61 ASN 61 394 394 ASN ASN C . n A 1 62 VAL 62 395 395 VAL VAL C . n A 1 63 TYR 63 396 396 TYR TYR C . n A 1 64 ALA 64 397 397 ALA ALA C . n A 1 65 ASP 65 398 398 ASP ASP C . n A 1 66 SER 66 399 399 SER SER C . n A 1 67 PHE 67 400 400 PHE PHE C . n A 1 68 VAL 68 401 401 VAL VAL C . n A 1 69 ILE 69 402 402 ILE ILE C . n A 1 70 ARG 70 403 403 ARG ARG C . n A 1 71 GLY 71 404 404 GLY GLY C . n A 1 72 ASP 72 405 405 ASP ASP C . n A 1 73 GLU 73 406 406 GLU GLU C . n A 1 74 VAL 74 407 407 VAL VAL C . n A 1 75 ARG 75 408 408 ARG ARG C . n A 1 76 GLN 76 409 409 GLN GLN C . n A 1 77 ILE 77 410 410 ILE ILE C . n A 1 78 ALA 78 411 411 ALA ALA C . n A 1 79 PRO 79 412 412 PRO PRO C . n A 1 80 GLY 80 413 413 GLY GLY C . n A 1 81 GLN 81 414 414 GLN GLN C . n A 1 82 THR 82 415 415 THR THR C . n A 1 83 GLY 83 416 416 GLY GLY C . n A 1 84 LYS 84 417 417 LYS LYS C . n A 1 85 ILE 85 418 418 ILE ILE C . n A 1 86 ALA 86 419 419 ALA ALA C . n A 1 87 ASP 87 420 420 ASP ASP C . n A 1 88 TYR 88 421 421 TYR TYR C . n A 1 89 ASN 89 422 422 ASN ASN C . n A 1 90 TYR 90 423 423 TYR TYR C . n A 1 91 LYS 91 424 424 LYS LYS C . n A 1 92 LEU 92 425 425 LEU LEU C . n A 1 93 PRO 93 426 426 PRO PRO C . n A 1 94 ASP 94 427 427 ASP ASP C . n A 1 95 ASP 95 428 428 ASP ASP C . n A 1 96 PHE 96 429 429 PHE PHE C . n A 1 97 THR 97 430 430 THR THR C . n A 1 98 GLY 98 431 431 GLY GLY C . n A 1 99 CYS 99 432 432 CYS CYS C . n A 1 100 VAL 100 433 433 VAL VAL C . n A 1 101 ILE 101 434 434 ILE ILE C . n A 1 102 ALA 102 435 435 ALA ALA C . n A 1 103 TRP 103 436 436 TRP TRP C . n A 1 104 ASN 104 437 437 ASN ASN C . n A 1 105 SER 105 438 438 SER SER C . n A 1 106 ASN 106 439 439 ASN ASN C . n A 1 107 ASN 107 440 440 ASN ASN C . n A 1 108 LEU 108 441 441 LEU LEU C . n A 1 109 ASP 109 442 442 ASP ASP C . n A 1 110 SER 110 443 443 SER SER C . n A 1 111 LYS 111 444 444 LYS LYS C . n A 1 112 VAL 112 445 445 VAL VAL C . n A 1 113 GLY 113 446 446 GLY GLY C . n A 1 114 GLY 114 447 447 GLY GLY C . n A 1 115 ASN 115 448 448 ASN ASN C . n A 1 116 TYR 116 449 449 TYR TYR C . n A 1 117 ASN 117 450 450 ASN ASN C . n A 1 118 TYR 118 451 451 TYR TYR C . n A 1 119 LEU 119 452 452 LEU LEU C . n A 1 120 TYR 120 453 453 TYR TYR C . n A 1 121 ARG 121 454 454 ARG ARG C . n A 1 122 LEU 122 455 455 LEU LEU C . n A 1 123 PHE 123 456 456 PHE PHE C . n A 1 124 ARG 124 457 457 ARG ARG C . n A 1 125 LYS 125 458 458 LYS LYS C . n A 1 126 SER 126 459 459 SER SER C . n A 1 127 ASN 127 460 460 ASN ASN C . n A 1 128 LEU 128 461 461 LEU LEU C . n A 1 129 LYS 129 462 462 LYS LYS C . n A 1 130 PRO 130 463 463 PRO PRO C . n A 1 131 PHE 131 464 464 PHE PHE C . n A 1 132 GLU 132 465 465 GLU GLU C . n A 1 133 ARG 133 466 466 ARG ARG C . n A 1 134 ASP 134 467 467 ASP ASP C . n A 1 135 ILE 135 468 468 ILE ILE C . n A 1 136 SER 136 469 469 SER SER C . n A 1 137 THR 137 470 470 THR THR C . n A 1 138 GLU 138 471 471 GLU GLU C . n A 1 139 ILE 139 472 472 ILE ILE C . n A 1 140 TYR 140 473 473 TYR TYR C . n A 1 141 GLN 141 474 474 GLN GLN C . n A 1 142 ALA 142 475 475 ALA ALA C . n A 1 143 GLY 143 476 476 GLY GLY C . n A 1 144 SER 144 477 477 SER SER C . n A 1 145 THR 145 478 478 THR THR C . n A 1 146 PRO 146 479 479 PRO PRO C . n A 1 147 CYS 147 480 480 CYS CYS C . n A 1 148 ASN 148 481 481 ASN ASN C . n A 1 149 GLY 149 482 482 GLY GLY C . n A 1 150 VAL 150 483 483 VAL VAL C . n A 1 151 GLU 151 484 484 GLU GLU C . n A 1 152 GLY 152 485 485 GLY GLY C . n A 1 153 PHE 153 486 486 PHE PHE C . n A 1 154 ASN 154 487 487 ASN ASN C . n A 1 155 CYS 155 488 488 CYS CYS C . n A 1 156 TYR 156 489 489 TYR TYR C . n A 1 157 PHE 157 490 490 PHE PHE C . n A 1 158 PRO 158 491 491 PRO PRO C . n A 1 159 LEU 159 492 492 LEU LEU C . n A 1 160 GLN 160 493 493 GLN GLN C . n A 1 161 SER 161 494 494 SER SER C . n A 1 162 TYR 162 495 495 TYR TYR C . n A 1 163 GLY 163 496 496 GLY GLY C . n A 1 164 PHE 164 497 497 PHE PHE C . n A 1 165 GLN 165 498 498 GLN GLN C . n A 1 166 PRO 166 499 499 PRO PRO C . n A 1 167 THR 167 500 500 THR THR C . n A 1 168 ASN 168 501 501 ASN ASN C . n A 1 169 GLY 169 502 502 GLY GLY C . n A 1 170 VAL 170 503 503 VAL VAL C . n A 1 171 GLY 171 504 504 GLY GLY C . n A 1 172 TYR 172 505 505 TYR TYR C . n A 1 173 GLN 173 506 506 GLN GLN C . n A 1 174 PRO 174 507 507 PRO PRO C . n A 1 175 TYR 175 508 508 TYR TYR C . n A 1 176 ARG 176 509 509 ARG ARG C . n A 1 177 VAL 177 510 510 VAL VAL C . n A 1 178 VAL 178 511 511 VAL VAL C . n A 1 179 VAL 179 512 512 VAL VAL C . n A 1 180 LEU 180 513 513 LEU LEU C . n A 1 181 SER 181 514 514 SER SER C . n A 1 182 PHE 182 515 515 PHE PHE C . n A 1 183 GLU 183 516 516 GLU GLU C . n A 1 184 LEU 184 517 517 LEU LEU C . n A 1 185 LEU 185 518 518 LEU LEU C . n A 1 186 HIS 186 519 519 HIS HIS C . n A 1 187 ALA 187 520 520 ALA ALA C . n A 1 188 PRO 188 521 521 PRO PRO C . n A 1 189 ALA 189 522 522 ALA ALA C . n A 1 190 THR 190 523 523 THR THR C . n A 1 191 VAL 191 524 524 VAL VAL C . n A 1 192 CYS 192 525 525 CYS CYS C . n A 1 193 GLY 193 526 526 GLY GLY C . n A 1 194 PRO 194 527 527 PRO PRO C . n B 2 1 GLN 1 1 1 GLN GLN B . n B 2 2 VAL 2 2 2 VAL VAL B . n B 2 3 THR 3 3 3 THR THR B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 ARG 5 5 5 ARG ARG B . n B 2 6 GLU 6 6 6 GLU GLU B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 GLY 8 8 8 GLY GLY B . n B 2 9 PRO 9 9 9 PRO PRO B . n B 2 10 THR 10 10 10 THR THR B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 VAL 12 12 12 VAL VAL B . n B 2 13 LYS 13 13 13 LYS LYS B . n B 2 14 PRO 14 14 14 PRO PRO B . n B 2 15 LYS 15 15 15 LYS LYS B . n B 2 16 GLN 16 16 16 GLN GLN B . n B 2 17 THR 17 17 17 THR THR B . n B 2 18 LEU 18 18 18 LEU LEU B . n B 2 19 THR 19 19 19 THR THR B . n B 2 20 LEU 20 20 20 LEU LEU B . n B 2 21 THR 21 21 21 THR THR B . n B 2 22 CYS 22 22 22 CYS CYS B . n B 2 23 THR 23 23 23 THR THR B . n B 2 24 PHE 24 24 24 PHE PHE B . n B 2 25 SER 25 25 25 SER SER B . n B 2 26 GLY 26 26 26 GLY GLY B . n B 2 27 PHE 27 27 27 PHE PHE B . n B 2 28 SER 28 28 28 SER SER B . n B 2 29 LEU 29 29 29 LEU LEU B . n B 2 30 SER 30 30 30 SER SER B . n B 2 31 THR 31 31 31 THR THR B . n B 2 32 PRO 32 32 32 PRO PRO B . n B 2 33 GLY 33 33 33 GLY GLY B . n B 2 34 GLY 34 34 34 GLY GLY B . n B 2 35 GLY 35 35 35 GLY GLY B . n B 2 36 VAL 36 36 36 VAL VAL B . n B 2 37 GLY 37 37 37 GLY GLY B . n B 2 38 TRP 38 38 38 TRP TRP B . n B 2 39 ILE 39 39 39 ILE ILE B . n B 2 40 ARG 40 40 40 ARG ARG B . n B 2 41 GLN 41 41 41 GLN GLN B . n B 2 42 PRO 42 42 42 PRO PRO B . n B 2 43 PRO 43 43 43 PRO PRO B . n B 2 44 GLY 44 44 44 GLY GLY B . n B 2 45 LYS 45 45 45 LYS LYS B . n B 2 46 ALA 46 46 46 ALA ALA B . n B 2 47 LEU 47 47 47 LEU LEU B . n B 2 48 GLU 48 48 48 GLU GLU B . n B 2 49 TRP 49 49 49 TRP TRP B . n B 2 50 LEU 50 50 50 LEU LEU B . n B 2 51 ALA 51 51 51 ALA ALA B . n B 2 52 LEU 52 52 52 LEU LEU B . n B 2 53 ILE 53 53 53 ILE ILE B . n B 2 54 TYR 54 54 54 TYR TYR B . n B 2 55 TRP 55 55 55 TRP TRP B . n B 2 56 ASP 56 56 56 ASP ASP B . n B 2 57 ASP 57 57 57 ASP ASP B . n B 2 58 ASP 58 58 58 ASP ASP B . n B 2 59 LYS 59 59 59 LYS LYS B . n B 2 60 ARG 60 60 60 ARG ARG B . n B 2 61 TYR 61 61 61 TYR TYR B . n B 2 62 SER 62 62 62 SER SER B . n B 2 63 PRO 63 63 63 PRO PRO B . n B 2 64 SER 64 64 64 SER SER B . n B 2 65 LEU 65 65 65 LEU LEU B . n B 2 66 LYS 66 66 66 LYS LYS B . n B 2 67 SER 67 67 67 SER SER B . n B 2 68 SER 68 68 68 SER SER B . n B 2 69 LEU 69 69 69 LEU LEU B . n B 2 70 THR 70 70 70 THR THR B . n B 2 71 ILE 71 71 71 ILE ILE B . n B 2 72 THR 72 72 72 THR THR B . n B 2 73 LYS 73 73 73 LYS LYS B . n B 2 74 ASP 74 74 74 ASP ASP B . n B 2 75 THR 75 75 75 THR THR B . n B 2 76 SER 76 76 76 SER SER B . n B 2 77 LYS 77 77 77 LYS LYS B . n B 2 78 ASN 78 78 78 ASN ASN B . n B 2 79 GLN 79 79 79 GLN GLN B . n B 2 80 VAL 80 80 80 VAL VAL B . n B 2 81 VAL 81 81 81 VAL VAL B . n B 2 82 LEU 82 82 82 LEU LEU B . n B 2 83 THR 83 83 83 THR THR B . n B 2 84 MET 84 84 84 MET MET B . n B 2 85 THR 85 85 85 THR THR B . n B 2 86 ASN 86 86 86 ASN ASN B . n B 2 87 MET 87 87 87 MET MET B . n B 2 88 ASP 88 88 88 ASP ASP B . n B 2 89 PRO 89 89 89 PRO PRO B . n B 2 90 VAL 90 90 90 VAL VAL B . n B 2 91 ASP 91 91 91 ASP ASP B . n B 2 92 THR 92 92 92 THR THR B . n B 2 93 ALA 93 93 93 ALA ALA B . n B 2 94 THR 94 94 94 THR THR B . n B 2 95 TYR 95 95 95 TYR TYR B . n B 2 96 TYR 96 96 96 TYR TYR B . n B 2 97 CYS 97 97 97 CYS CYS B . n B 2 98 ALA 98 98 98 ALA ALA B . n B 2 99 ARG 99 99 99 ARG ARG B . n B 2 100 LEU 100 100 100 LEU LEU B . n B 2 101 THR 101 101 101 THR THR B . n B 2 102 ALA 102 102 102 ALA ALA B . n B 2 103 ALA 103 103 103 ALA ALA B . n B 2 104 ASP 104 104 104 ASP ASP B . n B 2 105 THR 105 105 105 THR THR B . n B 2 106 ILE 106 106 106 ILE ILE B . n B 2 107 PHE 107 107 107 PHE PHE B . n B 2 108 ASP 108 108 108 ASP ASP B . n B 2 109 CYS 109 109 109 CYS CYS B . n B 2 110 TRP 110 110 110 TRP TRP B . n B 2 111 GLY 111 111 111 GLY GLY B . n B 2 112 GLN 112 112 112 GLN GLN B . n B 2 113 GLY 113 113 113 GLY GLY B . n B 2 114 THR 114 114 114 THR THR B . n B 2 115 LEU 115 115 115 LEU LEU B . n B 2 116 VAL 116 116 116 VAL VAL B . n B 2 117 THR 117 117 117 THR THR B . n B 2 118 VAL 118 118 118 VAL VAL B . n B 2 119 SER 119 119 119 SER SER B . n B 2 120 SER 120 120 120 SER SER B . n C 3 1 GLN 1 1 ? ? ? A . n C 3 2 SER 2 2 ? ? ? A . n C 3 3 ALA 3 3 3 ALA ALA A . n C 3 4 LEU 4 4 4 LEU LEU A . n C 3 5 THR 5 5 5 THR THR A . n C 3 6 GLN 6 6 6 GLN GLN A . n C 3 7 PRO 7 7 7 PRO PRO A . n C 3 8 ALA 8 8 8 ALA ALA A . n C 3 9 SER 9 9 9 SER SER A . n C 3 10 VAL 10 10 10 VAL VAL A . n C 3 11 SER 11 11 11 SER SER A . n C 3 12 GLY 12 12 12 GLY GLY A . n C 3 13 SER 13 13 13 SER SER A . n C 3 14 PRO 14 14 14 PRO PRO A . n C 3 15 GLY 15 15 15 GLY GLY A . n C 3 16 LEU 16 16 16 LEU LEU A . n C 3 17 SER 17 17 17 SER SER A . n C 3 18 ILE 18 18 18 ILE ILE A . n C 3 19 THR 19 19 19 THR THR A . n C 3 20 ILE 20 20 20 ILE ILE A . n C 3 21 SER 21 21 21 SER SER A . n C 3 22 CYS 22 22 22 CYS CYS A . n C 3 23 THR 23 23 23 THR THR A . n C 3 24 ALA 24 24 24 ALA ALA A . n C 3 25 THR 25 25 25 THR THR A . n C 3 26 SER 26 26 26 SER SER A . n C 3 27 SER 27 27 27 SER SER A . n C 3 28 ASP 28 28 28 ASP ASP A . n C 3 29 VAL 29 29 29 VAL VAL A . n C 3 30 GLY 30 30 30 GLY GLY A . n C 3 31 ALA 31 31 31 ALA ALA A . n C 3 32 TYR 32 32 32 TYR TYR A . n C 3 33 ASN 33 33 33 ASN ASN A . n C 3 34 TYR 34 34 34 TYR TYR A . n C 3 35 VAL 35 35 35 VAL VAL A . n C 3 36 SER 36 36 36 SER SER A . n C 3 37 TRP 37 37 37 TRP TRP A . n C 3 38 TYR 38 38 38 TYR TYR A . n C 3 39 GLN 39 39 39 GLN GLN A . n C 3 40 GLN 40 40 40 GLN GLN A . n C 3 41 HIS 41 41 41 HIS HIS A . n C 3 42 PRO 42 42 42 PRO PRO A . n C 3 43 GLY 43 43 43 GLY GLY A . n C 3 44 GLN 44 44 44 GLN GLN A . n C 3 45 ALA 45 45 45 ALA ALA A . n C 3 46 PRO 46 46 46 PRO PRO A . n C 3 47 LYS 47 47 47 LYS LYS A . n C 3 48 LEU 48 48 48 LEU LEU A . n C 3 49 MET 49 49 49 MET MET A . n C 3 50 ILE 50 50 50 ILE ILE A . n C 3 51 TYR 51 51 51 TYR TYR A . n C 3 52 ASP 52 52 52 ASP ASP A . n C 3 53 VAL 53 53 53 VAL VAL A . n C 3 54 SER 54 54 54 SER SER A . n C 3 55 LYS 55 55 55 LYS LYS A . n C 3 56 ARG 56 56 56 ARG ARG A . n C 3 57 PRO 57 57 57 PRO PRO A . n C 3 58 SER 58 58 58 SER SER A . n C 3 59 GLY 59 59 59 GLY GLY A . n C 3 60 VAL 60 60 60 VAL VAL A . n C 3 61 SER 61 61 61 SER SER A . n C 3 62 ASN 62 62 62 ASN ASN A . n C 3 63 ARG 63 63 63 ARG ARG A . n C 3 64 PHE 64 64 64 PHE PHE A . n C 3 65 SER 65 65 65 SER SER A . n C 3 66 GLY 66 66 66 GLY GLY A . n C 3 67 SER 67 67 67 SER SER A . n C 3 68 LYS 68 68 68 LYS LYS A . n C 3 69 SER 69 69 69 SER SER A . n C 3 70 ALA 70 70 70 ALA ALA A . n C 3 71 ASN 71 71 71 ASN ASN A . n C 3 72 THR 72 72 72 THR THR A . n C 3 73 ALA 73 73 73 ALA ALA A . n C 3 74 SER 74 74 74 SER SER A . n C 3 75 LEU 75 75 75 LEU LEU A . n C 3 76 THR 76 76 76 THR THR A . n C 3 77 ILE 77 77 77 ILE ILE A . n C 3 78 SER 78 78 78 SER SER A . n C 3 79 GLY 79 79 79 GLY GLY A . n C 3 80 LEU 80 80 80 LEU LEU A . n C 3 81 GLN 81 81 81 GLN GLN A . n C 3 82 ALA 82 82 82 ALA ALA A . n C 3 83 GLU 83 83 83 GLU GLU A . n C 3 84 ASP 84 84 84 ASP ASP A . n C 3 85 GLU 85 85 85 GLU GLU A . n C 3 86 ALA 86 86 86 ALA ALA A . n C 3 87 ASP 87 87 87 ASP ASP A . n C 3 88 TYR 88 88 88 TYR TYR A . n C 3 89 TYR 89 89 89 TYR TYR A . n C 3 90 CYS 90 90 90 CYS CYS A . n C 3 91 SER 91 91 91 SER SER A . n C 3 92 SER 92 92 92 SER SER A . n C 3 93 TYR 93 93 93 TYR TYR A . n C 3 94 THR 94 94 94 THR THR A . n C 3 95 THR 95 95 95 THR THR A . n C 3 96 THR 96 96 96 THR THR A . n C 3 97 SER 97 97 97 SER SER A . n C 3 98 VAL 98 98 98 VAL VAL A . n C 3 99 VAL 99 99 99 VAL VAL A . n C 3 100 PHE 100 100 100 PHE PHE A . n C 3 101 GLY 101 101 101 GLY GLY A . n C 3 102 GLY 102 102 102 GLY GLY A . n C 3 103 GLY 103 103 103 GLY GLY A . n C 3 104 THR 104 104 104 THR THR A . n C 3 105 LYS 105 105 105 LYS LYS A . n C 3 106 LEU 106 106 106 LEU LEU A . n C 3 107 THR 107 107 107 THR THR A . n C 3 108 VAL 108 108 108 VAL VAL A . n C 3 109 LEU 109 109 109 LEU LEU A . n # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 528 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id C _pdbx_nonpoly_scheme.pdb_ins_code . # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.17.1_3660: _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7V27 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7V27 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7V27 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 7V27 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 3333 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.444 ? 4544 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 20.660 ? 465 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.040 ? 511 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.003 ? 580 ? f_plane_restr ? ? # _struct.entry_id 7V27 _struct.title 'RBD/XG005 local refinement' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7V27 _struct_keywords.text 'SARS-CoV-2, Spike, RBD domain, Antibodies, interface region, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; 334 2 PDB 7V27 7V27 ? 2 ? 1 3 PDB 7V27 7V27 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7V27 C 1 ? 194 ? P0DTC2 334 ? 527 ? 334 527 2 2 7V27 B 1 ? 120 ? 7V27 1 ? 120 ? 1 120 3 3 7V27 A 1 ? 109 ? 7V27 1 ? 109 ? 1 109 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3480 ? 1 MORE -14 ? 1 'SSA (A^2)' 19170 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 4 ? ASN A 10 ? PRO C 337 ASN C 343 1 ? 7 HELX_P HELX_P2 AA2 SER A 16 ? TRP A 20 ? SER C 349 TRP C 353 5 ? 5 HELX_P HELX_P3 AA3 TYR A 32 ? ASN A 37 ? TYR C 365 ASN C 370 1 ? 6 HELX_P HELX_P4 AA4 ASP B 88 ? THR B 92 ? ASP B 88 THR B 92 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 28 SG ? ? C CYS 336 C CYS 361 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf2 disulf ? ? A CYS 46 SG ? ? ? 1_555 A CYS 99 SG ? ? C CYS 379 C CYS 432 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf3 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 192 SG ? ? C CYS 391 C CYS 525 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf4 disulf ? ? A CYS 147 SG ? ? ? 1_555 A CYS 155 SG ? ? C CYS 480 C CYS 488 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf5 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 97 SG ? ? B CYS 22 B CYS 97 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf6 disulf ? ? C CYS 22 SG ? ? ? 1_555 C CYS 90 SG ? ? A CYS 22 A CYS 90 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale one ? A ASN 10 ND2 ? ? ? 1_555 D NAG . C1 ? ? C ASN 343 C NAG 601 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG D . ? ASN A 10 ? NAG C 601 ? 1_555 ASN C 343 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 CYS A 3 ? CYS A 28 ? CYS C 336 ? 1_555 CYS C 361 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 46 ? CYS A 99 ? CYS C 379 ? 1_555 CYS C 432 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 58 ? CYS A 192 ? CYS C 391 ? 1_555 CYS C 525 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 147 ? CYS A 155 ? CYS C 480 ? 1_555 CYS C 488 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 22 ? CYS B 97 ? CYS B 22 ? 1_555 CYS B 97 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS C 22 ? CYS C 90 ? CYS A 22 ? 1_555 CYS A 90 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 6 ? AA6 ? 5 ? AA7 ? 2 ? AA8 ? 3 ? AA9 ? 4 ? AB1 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA6 1 2 ? parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA7 1 2 ? parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 23 ? ARG A 24 ? LYS C 356 ARG C 357 AA1 2 TYR A 63 ? ILE A 69 ? TYR C 396 ILE C 402 AA1 3 TYR A 175 ? VAL A 179 ? TYR C 508 VAL C 512 AA1 4 ALA A 102 ? ASN A 104 ? ALA C 435 ASN C 437 AA2 1 CYS A 46 ? TYR A 47 ? CYS C 379 TYR C 380 AA2 2 GLY A 98 ? CYS A 99 ? GLY C 431 CYS C 432 AA3 1 LEU A 119 ? ARG A 121 ? LEU C 452 ARG C 454 AA3 2 LEU A 159 ? SER A 161 ? LEU C 492 SER C 494 AA4 1 THR B 3 ? SER B 7 ? THR B 3 SER B 7 AA4 2 THR B 17 ? SER B 25 ? THR B 17 SER B 25 AA4 3 VAL B 81 ? THR B 85 ? VAL B 81 THR B 85 AA4 4 THR B 70 ? ILE B 71 ? THR B 70 ILE B 71 AA5 1 LEU B 11 ? VAL B 12 ? LEU B 11 VAL B 12 AA5 2 THR B 114 ? VAL B 118 ? THR B 114 VAL B 118 AA5 3 ALA B 93 ? TYR B 96 ? ALA B 93 TYR B 96 AA5 4 GLY B 35 ? GLN B 41 ? GLY B 35 GLN B 41 AA5 5 GLU B 48 ? TYR B 54 ? GLU B 48 TYR B 54 AA5 6 ARG B 60 ? TYR B 61 ? ARG B 60 TYR B 61 AA6 1 LEU B 11 ? VAL B 12 ? LEU B 11 VAL B 12 AA6 2 THR B 114 ? VAL B 118 ? THR B 114 VAL B 118 AA6 3 ALA B 93 ? TYR B 96 ? ALA B 93 TYR B 96 AA6 4 GLY B 35 ? GLN B 41 ? GLY B 35 GLN B 41 AA6 5 ARG B 99 ? LEU B 100 ? ARG B 99 LEU B 100 AA7 1 SER C 11 ? GLY C 12 ? SER A 11 GLY A 12 AA7 2 THR C 107 ? VAL C 108 ? THR A 107 VAL A 108 AA8 1 THR C 19 ? CYS C 22 ? THR A 19 CYS A 22 AA8 2 ALA C 73 ? THR C 76 ? ALA A 73 THR A 76 AA8 3 SER C 65 ? LYS C 68 ? SER A 65 LYS A 68 AA9 1 LEU C 48 ? ILE C 50 ? LEU A 48 ILE A 50 AA9 2 VAL C 35 ? GLN C 40 ? VAL A 35 GLN A 40 AA9 3 ASP C 87 ? TYR C 93 ? ASP A 87 TYR A 93 AA9 4 VAL C 98 ? VAL C 99 ? VAL A 98 VAL A 99 AB1 1 LEU C 48 ? ILE C 50 ? LEU A 48 ILE A 50 AB1 2 VAL C 35 ? GLN C 40 ? VAL A 35 GLN A 40 AB1 3 ASP C 87 ? TYR C 93 ? ASP A 87 TYR A 93 AB1 4 THR C 104 ? LYS C 105 ? THR A 104 LYS A 105 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 23 ? N LYS C 356 O ALA A 64 ? O ALA C 397 AA1 2 3 N PHE A 67 ? N PHE C 400 O VAL A 177 ? O VAL C 510 AA1 3 4 O ARG A 176 ? O ARG C 509 N TRP A 103 ? N TRP C 436 AA2 1 2 N TYR A 47 ? N TYR C 380 O GLY A 98 ? O GLY C 431 AA3 1 2 N TYR A 120 ? N TYR C 453 O GLN A 160 ? O GLN C 493 AA4 1 2 N SER B 7 ? N SER B 7 O THR B 21 ? O THR B 21 AA4 2 3 N LEU B 18 ? N LEU B 18 O MET B 84 ? O MET B 84 AA4 3 4 O THR B 83 ? O THR B 83 N THR B 70 ? N THR B 70 AA5 1 2 N VAL B 12 ? N VAL B 12 O THR B 117 ? O THR B 117 AA5 2 3 O THR B 114 ? O THR B 114 N TYR B 95 ? N TYR B 95 AA5 3 4 O TYR B 96 ? O TYR B 96 N ILE B 39 ? N ILE B 39 AA5 4 5 N TRP B 38 ? N TRP B 38 O LEU B 50 ? O LEU B 50 AA5 5 6 N LEU B 52 ? N LEU B 52 O ARG B 60 ? O ARG B 60 AA6 1 2 N VAL B 12 ? N VAL B 12 O THR B 117 ? O THR B 117 AA6 2 3 O THR B 114 ? O THR B 114 N TYR B 95 ? N TYR B 95 AA6 3 4 O TYR B 96 ? O TYR B 96 N ILE B 39 ? N ILE B 39 AA6 4 5 N GLY B 35 ? N GLY B 35 O LEU B 100 ? O LEU B 100 AA7 1 2 N GLY C 12 ? N GLY A 12 O THR C 107 ? O THR A 107 AA8 1 2 N CYS C 22 ? N CYS A 22 O ALA C 73 ? O ALA A 73 AA8 2 3 O THR C 76 ? O THR A 76 N SER C 65 ? N SER A 65 AA9 1 2 O ILE C 50 ? O ILE A 50 N TRP C 37 ? N TRP A 37 AA9 2 3 N SER C 36 ? N SER A 36 O SER C 91 ? O SER A 91 AA9 3 4 N SER C 92 ? N SER A 92 O VAL C 99 ? O VAL A 99 AB1 1 2 O ILE C 50 ? O ILE A 50 N TRP C 37 ? N TRP A 37 AB1 2 3 N SER C 36 ? N SER A 36 O SER C 91 ? O SER A 91 AB1 3 4 N TYR C 88 ? N TYR A 88 O THR C 104 ? O THR A 104 # _pdbx_entry_details.entry_id 7V27 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN C 343 ? ? -99.58 36.26 2 1 ASP C 364 ? ? -96.36 59.30 3 1 ASN C 370 ? ? -97.95 31.92 4 1 ASP C 389 ? ? -88.63 49.06 5 1 LEU C 390 ? ? -171.60 143.65 6 1 ALA C 411 ? ? -170.74 149.45 7 1 PRO C 412 ? ? -80.51 47.80 8 1 TYR C 423 ? ? -160.68 116.46 9 1 THR C 478 ? ? 52.85 74.38 10 1 ASN C 481 ? ? 60.03 61.63 11 1 SER A 69 ? ? -93.03 -62.32 12 1 SER A 78 ? ? -77.96 -167.58 13 1 ASP A 84 ? ? -173.34 -175.70 # _em_3d_fitting.entry_id 7V27 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7V27 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 70995 _em_3d_reconstruction.resolution 4.18 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.0 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 ? 'Interface of RBD and XG005' RECOMBINANT COMPLEX '1, 2, 3' ? ? 2 1 ? RBD RECOMBINANT COMPLEX 1 ? ? 3 1 ? XG005 RECOMBINANT COMPLEX 2,3 ? ? # _em_imaging.id 1 _em_imaging.entry_id 7V27 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7V27 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7V27 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 1 ? C GLN 1 2 1 Y 1 A SER 2 ? C SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.entry_id 7V27 _em_admin.current_status REL _em_admin.deposition_date 2021-08-07 _em_admin.deposition_site PDBJ _em_admin.last_update 2024-11-20 _em_admin.map_release_date 2022-08-10 _em_admin.title 'RBD/XG005 local refinement' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 2 1 ? ? 2697049 ? ? 'Severe acute respiratory syndrome coronavirus 2' ? ? 3 2 ? ? 9606 ? ? 'Homo sapiens' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 2 1 HEK293T 9606 'Homo sapiens' ? ? 3 2 HEK293T 9606 'Homo sapiens' ? ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 53 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode SUPER-RESOLUTION _em_image_recording.film_or_detector_model 'GATAN K2 QUANTUM (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 81900729 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 7V27 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_