HEADER VIRAL PROTEIN 10-AUG-21 7V39 TITLE CRYSTAL STRUCTURE OF NP EXONUCLEASE-PCMB COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NUCLEOCAPSID PROTEIN,PROTEIN N; COMPND 5 EC: 3.1.13.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LASSA VIRUS (STRAIN MOUSE/SIERRA SOURCE 3 LEONE/JOSIAH/1976); SOURCE 4 ORGANISM_COMMON: LASV; SOURCE 5 ORGANISM_TAXID: 11622; SOURCE 6 STRAIN: MOUSE/SIERRA LEONE/JOSIAH/1976; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DEDDH EXONUCLEASE, NP EXONUCLEASE, ANTI-VIRAL DRUG, PCMPS, PCMB, KEYWDS 2 VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.Y.HSIAO,K.W.HUANG REVDAT 3 29-NOV-23 7V39 1 REMARK REVDAT 2 16-FEB-22 7V39 1 JRNL REVDAT 1 15-DEC-21 7V39 0 JRNL AUTH K.W.HUANG,J.W.CHEN,T.Y.HUA,Y.Y.CHU,T.Y.CHIU,J.Y.LIU,C.I.TU, JRNL AUTH 2 K.C.HSU,Y.T.KAO,J.W.CHU,Y.Y.HSIAO JRNL TITL TARGETED COVALENT INHIBITORS ALLOSTERICALLY DEACTIVATE THE JRNL TITL 2 DEDDH LASSA FEVER VIRUS NP EXONUCLEASE FROM ALTERNATIVE JRNL TITL 3 DISTAL SITES. JRNL REF JACS AU V. 1 2315 2021 JRNL REFN ESSN 2691-3704 JRNL PMID 34977900 JRNL DOI 10.1021/JACSAU.1C00420 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 28191 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.440 REMARK 3 FREE R VALUE TEST SET COUNT : 2097 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.8160 - 5.4145 1.00 1890 145 0.1925 0.2237 REMARK 3 2 5.4145 - 4.3022 1.00 1800 132 0.1729 0.2133 REMARK 3 3 4.3022 - 3.7597 1.00 1751 159 0.1769 0.2153 REMARK 3 4 3.7597 - 3.4166 1.00 1747 134 0.1827 0.1756 REMARK 3 5 3.4166 - 3.1720 1.00 1748 124 0.1978 0.2203 REMARK 3 6 3.1720 - 2.9852 1.00 1734 146 0.2222 0.2134 REMARK 3 7 2.9852 - 2.8358 1.00 1725 151 0.2235 0.2410 REMARK 3 8 2.8358 - 2.7125 1.00 1719 134 0.2193 0.2764 REMARK 3 9 2.7125 - 2.6081 1.00 1722 138 0.2244 0.2676 REMARK 3 10 2.6081 - 2.5182 1.00 1718 127 0.2207 0.2466 REMARK 3 11 2.5182 - 2.4395 1.00 1735 133 0.2161 0.2711 REMARK 3 12 2.4395 - 2.3698 1.00 1709 136 0.2225 0.2792 REMARK 3 13 2.3698 - 2.3074 1.00 1695 149 0.2201 0.2720 REMARK 3 14 2.3074 - 2.2512 1.00 1694 155 0.2218 0.2692 REMARK 3 15 2.2512 - 2.2000 1.00 1707 134 0.2260 0.2817 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -36.9261 6.3774 -35.6693 REMARK 3 T TENSOR REMARK 3 T11: 0.1647 T22: 0.1435 REMARK 3 T33: 0.1943 T12: -0.0095 REMARK 3 T13: 0.0439 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.9429 L22: 0.6346 REMARK 3 L33: 1.3494 L12: -0.0571 REMARK 3 L13: 0.6959 L23: -0.0275 REMARK 3 S TENSOR REMARK 3 S11: -0.1021 S12: 0.0598 S13: 0.0730 REMARK 3 S21: -0.0216 S22: 0.0216 S23: 0.0037 REMARK 3 S31: -0.0668 S32: 0.0218 S33: 0.0652 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7V39 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1300023894. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28303 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7V37 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M DL-MALIC ACID PH 7.0, 20% W/V REMARK 280 POLYETHYLENE GLYCOL 3,350, 2MM SODIUM P-HYDROXYMERCURIBENZOATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.09250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.39200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.14600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.39200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.09250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.14600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 321 REMARK 465 GLY A 322 REMARK 465 SER A 323 REMARK 465 SER A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 465 HIS A 329 REMARK 465 HIS A 330 REMARK 465 SER A 331 REMARK 465 SER A 332 REMARK 465 GLY A 333 REMARK 465 LEU A 334 REMARK 465 VAL A 335 REMARK 465 PRO A 336 REMARK 465 ARG A 337 REMARK 465 GLY A 338 REMARK 465 SER A 339 REMARK 465 HIS A 340 REMARK 465 MET A 341 REMARK 465 GLY A 342 REMARK 465 LYS A 343 REMARK 465 PRO A 344 REMARK 465 GLN A 345 REMARK 465 LYS A 346 REMARK 465 ALA A 347 REMARK 465 ASP A 348 REMARK 465 SER A 349 REMARK 465 ASN A 350 REMARK 465 ASN A 351 REMARK 465 SER A 352 REMARK 465 SER A 353 REMARK 465 LYS A 354 REMARK 465 SER A 355 REMARK 465 LEU A 356 REMARK 465 GLN A 357 REMARK 465 SER A 358 REMARK 465 ALA A 359 REMARK 465 GLY A 360 REMARK 465 PHE A 361 REMARK 465 THR A 362 REMARK 465 LYS A 516 REMARK 465 LYS A 517 REMARK 465 LYS A 518 REMARK 465 ARG A 519 REMARK 465 MET B 321 REMARK 465 GLY B 322 REMARK 465 SER B 323 REMARK 465 SER B 324 REMARK 465 HIS B 325 REMARK 465 HIS B 326 REMARK 465 HIS B 327 REMARK 465 HIS B 328 REMARK 465 HIS B 329 REMARK 465 HIS B 330 REMARK 465 SER B 331 REMARK 465 SER B 332 REMARK 465 GLY B 333 REMARK 465 LEU B 334 REMARK 465 VAL B 335 REMARK 465 PRO B 336 REMARK 465 ARG B 337 REMARK 465 GLY B 338 REMARK 465 SER B 339 REMARK 465 HIS B 340 REMARK 465 MET B 341 REMARK 465 GLY B 342 REMARK 465 LYS B 343 REMARK 465 PRO B 344 REMARK 465 GLN B 345 REMARK 465 LYS B 346 REMARK 465 ALA B 347 REMARK 465 ASP B 348 REMARK 465 SER B 349 REMARK 465 ASN B 350 REMARK 465 ASN B 351 REMARK 465 SER B 352 REMARK 465 SER B 353 REMARK 465 LYS B 354 REMARK 465 SER B 355 REMARK 465 LEU B 356 REMARK 465 GLN B 357 REMARK 465 SER B 358 REMARK 465 ALA B 359 REMARK 465 GLY B 360 REMARK 465 LYS B 517 REMARK 465 LYS B 518 REMARK 465 ARG B 519 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 430 -75.24 -138.83 REMARK 500 ALA A 485 75.46 -117.30 REMARK 500 ASP B 396 60.75 -156.13 REMARK 500 SER B 430 -76.55 -143.18 REMARK 500 ARG B 476 59.46 -118.43 REMARK 500 ALA B 485 62.85 -106.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 HGB A 602 REMARK 610 HGB B 602 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 399 OE2 REMARK 620 2 CYS A 506 SG 105.8 REMARK 620 3 HIS A 509 NE2 115.4 101.7 REMARK 620 4 CYS A 529 SG 112.4 122.0 99.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 399 OE2 REMARK 620 2 CYS B 506 SG 107.1 REMARK 620 3 HIS B 509 NE2 113.0 112.0 REMARK 620 4 CYS B 529 SG 106.0 118.1 100.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HGB A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HGB B 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7V37 RELATED DB: PDB REMARK 900 RELATED ID: 7V38 RELATED DB: PDB DBREF 7V39 A 342 569 UNP P13699 NCAP_LASSJ 342 569 DBREF 7V39 B 342 569 UNP P13699 NCAP_LASSJ 342 569 SEQADV 7V39 MET A 321 UNP P13699 INITIATING METHIONINE SEQADV 7V39 GLY A 322 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER A 323 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER A 324 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS A 325 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS A 326 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS A 327 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS A 328 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS A 329 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS A 330 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER A 331 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER A 332 UNP P13699 EXPRESSION TAG SEQADV 7V39 GLY A 333 UNP P13699 EXPRESSION TAG SEQADV 7V39 LEU A 334 UNP P13699 EXPRESSION TAG SEQADV 7V39 VAL A 335 UNP P13699 EXPRESSION TAG SEQADV 7V39 PRO A 336 UNP P13699 EXPRESSION TAG SEQADV 7V39 ARG A 337 UNP P13699 EXPRESSION TAG SEQADV 7V39 GLY A 338 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER A 339 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS A 340 UNP P13699 EXPRESSION TAG SEQADV 7V39 MET A 341 UNP P13699 EXPRESSION TAG SEQADV 7V39 MET B 321 UNP P13699 INITIATING METHIONINE SEQADV 7V39 GLY B 322 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER B 323 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER B 324 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS B 325 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS B 326 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS B 327 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS B 328 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS B 329 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS B 330 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER B 331 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER B 332 UNP P13699 EXPRESSION TAG SEQADV 7V39 GLY B 333 UNP P13699 EXPRESSION TAG SEQADV 7V39 LEU B 334 UNP P13699 EXPRESSION TAG SEQADV 7V39 VAL B 335 UNP P13699 EXPRESSION TAG SEQADV 7V39 PRO B 336 UNP P13699 EXPRESSION TAG SEQADV 7V39 ARG B 337 UNP P13699 EXPRESSION TAG SEQADV 7V39 GLY B 338 UNP P13699 EXPRESSION TAG SEQADV 7V39 SER B 339 UNP P13699 EXPRESSION TAG SEQADV 7V39 HIS B 340 UNP P13699 EXPRESSION TAG SEQADV 7V39 MET B 341 UNP P13699 EXPRESSION TAG SEQRES 1 A 249 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 249 LEU VAL PRO ARG GLY SER HIS MET GLY LYS PRO GLN LYS SEQRES 3 A 249 ALA ASP SER ASN ASN SER SER LYS SER LEU GLN SER ALA SEQRES 4 A 249 GLY PHE THR ALA GLY LEU THR TYR SER GLN LEU MET THR SEQRES 5 A 249 LEU LYS ASP ALA MET LEU GLN LEU ASP PRO ASN ALA LYS SEQRES 6 A 249 THR TRP MET ASP ILE GLU GLY ARG PRO GLU ASP PRO VAL SEQRES 7 A 249 GLU ILE ALA LEU TYR GLN PRO SER SER GLY CYS TYR ILE SEQRES 8 A 249 HIS PHE PHE ARG GLU PRO THR ASP LEU LYS GLN PHE LYS SEQRES 9 A 249 GLN ASP ALA LYS TYR SER HIS GLY ILE ASP VAL THR ASP SEQRES 10 A 249 LEU PHE ALA THR GLN PRO GLY LEU THR SER ALA VAL ILE SEQRES 11 A 249 ASP ALA LEU PRO ARG ASN MET VAL ILE THR CYS GLN GLY SEQRES 12 A 249 SER ASP ASP ILE ARG LYS LEU LEU GLU SER GLN GLY ARG SEQRES 13 A 249 LYS ASP ILE LYS LEU ILE ASP ILE ALA LEU SER LYS THR SEQRES 14 A 249 ASP SER ARG LYS TYR GLU ASN ALA VAL TRP ASP GLN TYR SEQRES 15 A 249 LYS ASP LEU CYS HIS MET HIS THR GLY VAL VAL VAL GLU SEQRES 16 A 249 LYS LYS LYS ARG GLY GLY LYS GLU GLU ILE THR PRO HIS SEQRES 17 A 249 CYS ALA LEU MET ASP CYS ILE MET PHE ASP ALA ALA VAL SEQRES 18 A 249 SER GLY GLY LEU ASN THR SER VAL LEU ARG ALA VAL LEU SEQRES 19 A 249 PRO ARG ASP MET VAL PHE ARG THR SER THR PRO ARG VAL SEQRES 20 A 249 VAL LEU SEQRES 1 B 249 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 249 LEU VAL PRO ARG GLY SER HIS MET GLY LYS PRO GLN LYS SEQRES 3 B 249 ALA ASP SER ASN ASN SER SER LYS SER LEU GLN SER ALA SEQRES 4 B 249 GLY PHE THR ALA GLY LEU THR TYR SER GLN LEU MET THR SEQRES 5 B 249 LEU LYS ASP ALA MET LEU GLN LEU ASP PRO ASN ALA LYS SEQRES 6 B 249 THR TRP MET ASP ILE GLU GLY ARG PRO GLU ASP PRO VAL SEQRES 7 B 249 GLU ILE ALA LEU TYR GLN PRO SER SER GLY CYS TYR ILE SEQRES 8 B 249 HIS PHE PHE ARG GLU PRO THR ASP LEU LYS GLN PHE LYS SEQRES 9 B 249 GLN ASP ALA LYS TYR SER HIS GLY ILE ASP VAL THR ASP SEQRES 10 B 249 LEU PHE ALA THR GLN PRO GLY LEU THR SER ALA VAL ILE SEQRES 11 B 249 ASP ALA LEU PRO ARG ASN MET VAL ILE THR CYS GLN GLY SEQRES 12 B 249 SER ASP ASP ILE ARG LYS LEU LEU GLU SER GLN GLY ARG SEQRES 13 B 249 LYS ASP ILE LYS LEU ILE ASP ILE ALA LEU SER LYS THR SEQRES 14 B 249 ASP SER ARG LYS TYR GLU ASN ALA VAL TRP ASP GLN TYR SEQRES 15 B 249 LYS ASP LEU CYS HIS MET HIS THR GLY VAL VAL VAL GLU SEQRES 16 B 249 LYS LYS LYS ARG GLY GLY LYS GLU GLU ILE THR PRO HIS SEQRES 17 B 249 CYS ALA LEU MET ASP CYS ILE MET PHE ASP ALA ALA VAL SEQRES 18 B 249 SER GLY GLY LEU ASN THR SER VAL LEU ARG ALA VAL LEU SEQRES 19 B 249 PRO ARG ASP MET VAL PHE ARG THR SER THR PRO ARG VAL SEQRES 20 B 249 VAL LEU HET ZN A 601 1 HET HGB A 602 10 HET ZN B 601 1 HET HGB B 602 10 HETNAM ZN ZINC ION HETNAM HGB 4-(HYDROXYMERCURY)BENZOIC ACID FORMUL 3 ZN 2(ZN 2+) FORMUL 4 HGB 2(C7 H6 HG O3) FORMUL 7 HOH *273(H2 O) HELIX 1 AA1 THR A 366 LEU A 378 1 13 HELIX 2 AA2 ASP A 419 SER A 430 1 12 HELIX 3 AA3 ASP A 434 PHE A 439 5 6 HELIX 4 AA4 GLY A 444 LEU A 453 1 10 HELIX 5 AA5 GLY A 463 GLN A 474 1 12 HELIX 6 AA6 TYR A 494 LYS A 503 1 10 HELIX 7 AA7 ASP A 504 CYS A 506 5 3 HELIX 8 AA8 CYS A 529 GLY A 543 1 15 HELIX 9 AA9 PRO A 555 PHE A 560 1 6 HELIX 10 AB1 THR B 366 LEU B 378 1 13 HELIX 11 AB2 ASP B 419 SER B 430 1 12 HELIX 12 AB3 ASP B 434 PHE B 439 5 6 HELIX 13 AB4 GLY B 444 LEU B 453 1 10 HELIX 14 AB5 GLY B 463 GLN B 474 1 12 HELIX 15 AB6 SER B 487 ARG B 492 1 6 HELIX 16 AB7 TYR B 494 LYS B 503 1 10 HELIX 17 AB8 ASP B 504 CYS B 506 5 3 HELIX 18 AB9 CYS B 529 GLY B 543 1 15 HELIX 19 AC1 PRO B 555 PHE B 560 1 6 SHEET 1 AA1 6 LYS A 480 ILE A 484 0 SHEET 2 AA1 6 VAL A 458 GLN A 462 1 N ILE A 459 O LYS A 480 SHEET 3 AA1 6 THR A 386 GLU A 391 1 N THR A 386 O THR A 460 SHEET 4 AA1 6 GLU A 399 TYR A 403 -1 O TYR A 403 N TRP A 387 SHEET 5 AA1 6 CYS A 409 PHE A 414 -1 O PHE A 413 N ILE A 400 SHEET 6 AA1 6 ARG A 551 ALA A 552 1 O ARG A 551 N TYR A 410 SHEET 1 AA2 2 VAL A 513 VAL A 514 0 SHEET 2 AA2 2 GLU A 524 ILE A 525 -1 O ILE A 525 N VAL A 513 SHEET 1 AA3 6 LYS B 480 ILE B 484 0 SHEET 2 AA3 6 VAL B 458 GLN B 462 1 N ILE B 459 O LYS B 480 SHEET 3 AA3 6 THR B 386 ARG B 393 1 N THR B 386 O THR B 460 SHEET 4 AA3 6 ASP B 396 TYR B 403 -1 O TYR B 403 N TRP B 387 SHEET 5 AA3 6 CYS B 409 PHE B 414 -1 O PHE B 413 N ILE B 400 SHEET 6 AA3 6 ARG B 551 ALA B 552 1 O ARG B 551 N TYR B 410 SHEET 1 AA4 2 VAL B 513 GLU B 515 0 SHEET 2 AA4 2 GLU B 523 ILE B 525 -1 O ILE B 525 N VAL B 513 LINK OE2 GLU A 399 ZN ZN A 601 1555 1555 1.94 LINK SG CYS A 506 ZN ZN A 601 1555 1555 2.28 LINK NE2 HIS A 509 ZN ZN A 601 1555 1555 1.98 LINK SG CYS A 529 ZN ZN A 601 1555 1555 2.34 LINK OE2 GLU B 399 ZN ZN B 601 1555 1555 2.04 LINK SG CYS B 506 ZN ZN B 601 1555 1555 2.35 LINK NE2 HIS B 509 ZN ZN B 601 1555 1555 2.11 LINK SG CYS B 529 ZN ZN B 601 1555 1555 2.35 SITE 1 AC1 4 GLU A 399 CYS A 506 HIS A 509 CYS A 529 SITE 1 AC2 5 GLN A 379 CYS A 409 GLY A 520 ARG A 551 SITE 2 AC2 5 ALA A 552 SITE 1 AC3 4 GLU B 399 CYS B 506 HIS B 509 CYS B 529 SITE 1 AC4 4 GLN B 379 CYS B 409 ARG B 551 ALA B 552 CRYST1 50.185 76.292 140.784 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019926 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013108 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007103 0.00000