HEADER OXIDOREDUCTASE/RNA 13-AUG-21 7V4G TITLE CRYSTAL STRUCTURE OF HUMAN ALKBH5 IN COMPLEX WITH M6A-CONTAINING SSRNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (5'-R(P*GP*GP*(6MZ)P*C)-3'); COMPND 3 CHAIN: D, E, F; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RNA DEMETHYLASE ALKBH5; COMPND 7 CHAIN: A, B, C; COMPND 8 SYNONYM: ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 5,ALPHA- COMPND 9 KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 5; COMPND 10 EC: 1.14.11.53; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 GENE: ALKBH5, ABH5, OFOXD1; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IRON AND 2-OXOGLUTARATE DEPENDENT OXYGENASE, RNA DEMETHYLASE, DOUBLE- KEYWDS 2 STRANDED BETA HELIX, OXIDOREDUCTASE-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.KAUR,M.A.MCDONOUGH,C.J.SCHOFIELD,W.S.AIK REVDAT 4 29-NOV-23 7V4G 1 REMARK REVDAT 3 04-MAY-22 7V4G 1 JRNL REVDAT 2 06-APR-22 7V4G 1 JRNL REVDAT 1 30-MAR-22 7V4G 0 JRNL AUTH S.KAUR,N.Y.TAM,M.A.MCDONOUGH,C.J.SCHOFIELD,W.S.AIK JRNL TITL MECHANISMS OF SUBSTRATE RECOGNITION AND N6-METHYLADENOSINE JRNL TITL 2 DEMETHYLATION REVEALED BY CRYSTAL STRUCTURES OF ALKBH5-RNA JRNL TITL 3 COMPLEXES. JRNL REF NUCLEIC ACIDS RES. V. 50 4148 2022 JRNL REFN ESSN 1362-4962 JRNL PMID 35333330 JRNL DOI 10.1093/NAR/GKAC195 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 322.43 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 40601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.4600 - 5.0600 0.96 2768 122 0.1899 0.2069 REMARK 3 2 5.0600 - 4.0200 0.95 2754 140 0.1594 0.1771 REMARK 3 3 4.0200 - 3.5100 0.95 2789 132 0.1734 0.2276 REMARK 3 4 3.5100 - 3.1900 0.94 2719 181 0.1729 0.2232 REMARK 3 5 3.1900 - 2.9600 0.95 2770 137 0.1784 0.2121 REMARK 3 6 2.9600 - 2.7900 0.95 2725 129 0.1915 0.2294 REMARK 3 7 2.7900 - 2.6500 0.96 2803 130 0.1979 0.2267 REMARK 3 8 2.6500 - 2.5300 0.95 2741 152 0.2056 0.2500 REMARK 3 9 2.5300 - 2.4300 0.93 2702 192 0.2062 0.2660 REMARK 3 10 2.4300 - 2.3500 0.94 2731 184 0.2149 0.2893 REMARK 3 11 2.3500 - 2.2800 0.96 2746 122 0.2262 0.2426 REMARK 3 12 2.2800 - 2.2100 0.95 2778 160 0.2278 0.2749 REMARK 3 13 2.2100 - 2.1500 0.96 2792 104 0.2257 0.2760 REMARK 3 14 2.1500 - 2.1000 0.95 2766 132 0.2339 0.2525 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 189 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.0039 19.2606 17.9243 REMARK 3 T TENSOR REMARK 3 T11: 0.2980 T22: 0.2306 REMARK 3 T33: 0.0764 T12: 0.0311 REMARK 3 T13: -0.0178 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.8238 L22: 1.0319 REMARK 3 L33: 2.3788 L12: -0.1006 REMARK 3 L13: -0.3131 L23: -0.4520 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: -0.0544 S13: -0.0845 REMARK 3 S21: -0.0616 S22: 0.0442 S23: -0.0472 REMARK 3 S31: 0.3993 S32: 0.0664 S33: -0.0326 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 79 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5766 -26.6889 -2.6188 REMARK 3 T TENSOR REMARK 3 T11: 0.5940 T22: 0.4580 REMARK 3 T33: 0.2071 T12: -0.0629 REMARK 3 T13: -0.0745 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.5254 L22: 1.5967 REMARK 3 L33: 2.3081 L12: 0.2924 REMARK 3 L13: 0.3897 L23: -0.1902 REMARK 3 S TENSOR REMARK 3 S11: 0.2413 S12: -0.1531 S13: -0.0864 REMARK 3 S21: -0.4494 S22: -0.0831 S23: 0.1238 REMARK 3 S31: 0.8676 S32: -0.4242 S33: -0.1867 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 116 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0541 -27.9802 15.8332 REMARK 3 T TENSOR REMARK 3 T11: 0.5594 T22: 0.5455 REMARK 3 T33: 0.2671 T12: -0.1299 REMARK 3 T13: -0.1083 T23: 0.0325 REMARK 3 L TENSOR REMARK 3 L11: 1.0497 L22: 1.3623 REMARK 3 L33: 1.8312 L12: 0.3888 REMARK 3 L13: 0.3446 L23: -0.6424 REMARK 3 S TENSOR REMARK 3 S11: 0.3749 S12: -0.5300 S13: -0.2928 REMARK 3 S21: 0.3839 S22: -0.2276 S23: 0.0147 REMARK 3 S31: 0.8858 S32: -0.4843 S33: -0.1403 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 136 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.7943 -16.6961 15.1507 REMARK 3 T TENSOR REMARK 3 T11: 0.5116 T22: 0.5052 REMARK 3 T33: 0.2227 T12: -0.0257 REMARK 3 T13: -0.0646 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.9962 L22: 3.4609 REMARK 3 L33: 0.9247 L12: -0.8104 REMARK 3 L13: -0.3759 L23: -0.3336 REMARK 3 S TENSOR REMARK 3 S11: -0.1784 S12: -0.0546 S13: 0.1987 REMARK 3 S21: 0.4887 S22: 0.5834 S23: -0.3969 REMARK 3 S31: 0.2640 S32: -0.0704 S33: -0.4434 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 160 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.5407 -35.5461 6.1050 REMARK 3 T TENSOR REMARK 3 T11: 0.7311 T22: 0.3318 REMARK 3 T33: 0.3226 T12: 0.0569 REMARK 3 T13: -0.1259 T23: -0.0565 REMARK 3 L TENSOR REMARK 3 L11: 5.1105 L22: 4.4545 REMARK 3 L33: 2.4354 L12: 2.1620 REMARK 3 L13: 1.4195 L23: -0.8566 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: 0.1947 S13: -0.4370 REMARK 3 S21: 0.1142 S22: 0.2679 S23: -0.3010 REMARK 3 S31: 0.7683 S32: 0.3610 S33: -0.2879 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 172 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.7960 -30.9529 -6.5007 REMARK 3 T TENSOR REMARK 3 T11: 0.7227 T22: 0.6943 REMARK 3 T33: 0.3801 T12: 0.2007 REMARK 3 T13: -0.0153 T23: -0.2345 REMARK 3 L TENSOR REMARK 3 L11: 0.5260 L22: 0.3115 REMARK 3 L33: 1.7269 L12: 0.2246 REMARK 3 L13: -0.8783 L23: -0.6119 REMARK 3 S TENSOR REMARK 3 S11: -0.1034 S12: 0.3865 S13: -0.5564 REMARK 3 S21: -0.5512 S22: 0.5218 S23: -0.4917 REMARK 3 S31: 0.7887 S32: 0.5354 S33: -0.2854 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 189 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.0442 -20.2916 3.7127 REMARK 3 T TENSOR REMARK 3 T11: 0.4248 T22: 0.4173 REMARK 3 T33: 0.2002 T12: -0.0632 REMARK 3 T13: -0.0156 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 1.3766 L22: 1.7976 REMARK 3 L33: 1.7937 L12: 0.1405 REMARK 3 L13: -0.3487 L23: -0.7441 REMARK 3 S TENSOR REMARK 3 S11: 0.2602 S12: -0.1709 S13: -0.0132 REMARK 3 S21: 0.1637 S22: 0.0259 S23: 0.1115 REMARK 3 S31: -0.0180 S32: -0.0703 S33: -0.2712 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 229 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.4741 -13.2819 1.7051 REMARK 3 T TENSOR REMARK 3 T11: 0.3898 T22: 0.6534 REMARK 3 T33: 0.2082 T12: -0.0175 REMARK 3 T13: -0.0151 T23: 0.0932 REMARK 3 L TENSOR REMARK 3 L11: 1.0960 L22: 1.8364 REMARK 3 L33: 0.9316 L12: -1.1144 REMARK 3 L13: -0.1765 L23: 0.4114 REMARK 3 S TENSOR REMARK 3 S11: 0.0214 S12: -0.0977 S13: 0.0288 REMARK 3 S21: -0.1563 S22: 0.1785 S23: 0.2775 REMARK 3 S31: 0.1215 S32: -0.6792 S33: -0.1983 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 257 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.1580 -18.2015 3.3997 REMARK 3 T TENSOR REMARK 3 T11: 0.3285 T22: 0.3714 REMARK 3 T33: 0.1962 T12: -0.0641 REMARK 3 T13: 0.0130 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 1.4543 L22: 1.8837 REMARK 3 L33: 4.1289 L12: -0.6142 REMARK 3 L13: -0.3466 L23: -0.7135 REMARK 3 S TENSOR REMARK 3 S11: 0.2232 S12: -0.3035 S13: 0.0316 REMARK 3 S21: -0.1468 S22: 0.0559 S23: 0.1404 REMARK 3 S31: -0.0276 S32: 0.0614 S33: -0.2881 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 2 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0572 -12.1171 24.1252 REMARK 3 T TENSOR REMARK 3 T11: 0.3351 T22: 0.2518 REMARK 3 T33: 0.1589 T12: -0.0139 REMARK 3 T13: -0.0521 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.3234 L22: 1.5570 REMARK 3 L33: 0.1415 L12: -0.2079 REMARK 3 L13: -0.1988 L23: -0.0334 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: -0.0561 S13: -0.2698 REMARK 3 S21: 0.0369 S22: 0.1347 S23: 0.0484 REMARK 3 S31: 0.3756 S32: -0.0518 S33: -0.0591 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 2 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.7104 17.7182 7.2971 REMARK 3 T TENSOR REMARK 3 T11: 0.4099 T22: 0.3545 REMARK 3 T33: 0.1223 T12: 0.0480 REMARK 3 T13: 0.0071 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.9822 L22: 4.9756 REMARK 3 L33: 2.7760 L12: 0.6685 REMARK 3 L13: 1.5922 L23: 3.1338 REMARK 3 S TENSOR REMARK 3 S11: -0.1432 S12: 0.2986 S13: -0.2546 REMARK 3 S21: -0.2590 S22: 0.4762 S23: -0.1602 REMARK 3 S31: -0.0203 S32: 0.7311 S33: -0.2297 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 2 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.7882 -12.9305 13.9450 REMARK 3 T TENSOR REMARK 3 T11: 0.3700 T22: 0.5630 REMARK 3 T33: 0.1645 T12: 0.0601 REMARK 3 T13: -0.0345 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 2.3698 L22: 1.7805 REMARK 3 L33: 0.0157 L12: 1.6415 REMARK 3 L13: 0.1420 L23: 0.1684 REMARK 3 S TENSOR REMARK 3 S11: 0.1848 S12: -0.8529 S13: 0.0510 REMARK 3 S21: -0.0131 S22: -0.1954 S23: 0.2142 REMARK 3 S31: -0.3655 S32: 0.1954 S33: 0.1296 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6072 -5.8582 0.2451 REMARK 3 T TENSOR REMARK 3 T11: 0.3509 T22: 0.2979 REMARK 3 T33: 0.0928 T12: 0.0744 REMARK 3 T13: -0.0014 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 3.1641 L22: 1.7893 REMARK 3 L33: 1.4251 L12: 1.7032 REMARK 3 L13: 0.0924 L23: 0.5959 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: 0.0364 S13: 0.1247 REMARK 3 S21: -0.1888 S22: -0.0302 S23: 0.1342 REMARK 3 S31: 0.0987 S32: 0.0451 S33: 0.0206 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8603 2.9138 21.6179 REMARK 3 T TENSOR REMARK 3 T11: 0.2377 T22: 0.5740 REMARK 3 T33: -0.0258 T12: -0.0428 REMARK 3 T13: 0.0039 T23: -0.0706 REMARK 3 L TENSOR REMARK 3 L11: 0.2946 L22: 1.1733 REMARK 3 L33: 1.6527 L12: 0.4447 REMARK 3 L13: -0.2192 L23: -0.6003 REMARK 3 S TENSOR REMARK 3 S11: -0.0737 S12: -0.3015 S13: 0.0017 REMARK 3 S21: 0.0598 S22: -0.0015 S23: -0.2381 REMARK 3 S31: 0.1148 S32: 0.7153 S33: -0.1130 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 136 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1630 -1.2694 25.6972 REMARK 3 T TENSOR REMARK 3 T11: 0.3201 T22: 0.2839 REMARK 3 T33: 0.0630 T12: 0.0862 REMARK 3 T13: 0.0112 T23: -0.0249 REMARK 3 L TENSOR REMARK 3 L11: 1.5234 L22: 4.6944 REMARK 3 L33: 3.1241 L12: 0.8921 REMARK 3 L13: 1.8604 L23: 1.5293 REMARK 3 S TENSOR REMARK 3 S11: -0.0293 S12: -0.0605 S13: -0.0785 REMARK 3 S21: 0.3210 S22: 0.1479 S23: 0.2747 REMARK 3 S31: 0.2295 S32: -0.4222 S33: -0.0929 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3274 9.6313 13.2633 REMARK 3 T TENSOR REMARK 3 T11: 0.2934 T22: 0.2466 REMARK 3 T33: 0.1109 T12: -0.0101 REMARK 3 T13: 0.0308 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 1.2534 L22: 1.1788 REMARK 3 L33: 2.1767 L12: -0.2676 REMARK 3 L13: -0.0158 L23: 0.3131 REMARK 3 S TENSOR REMARK 3 S11: 0.1551 S12: 0.1677 S13: 0.1918 REMARK 3 S21: -0.0409 S22: 0.0332 S23: -0.1222 REMARK 3 S31: -0.5175 S32: 0.2292 S33: -0.1914 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4433 -6.5423 13.3561 REMARK 3 T TENSOR REMARK 3 T11: 0.2362 T22: 0.2347 REMARK 3 T33: 0.0785 T12: 0.0111 REMARK 3 T13: 0.0025 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.7604 L22: 1.1368 REMARK 3 L33: 1.8386 L12: -0.1863 REMARK 3 L13: -0.0392 L23: -0.1434 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: -0.0193 S13: -0.0708 REMARK 3 S21: -0.0393 S22: 0.0704 S23: -0.0287 REMARK 3 S31: 0.2204 S32: 0.1672 S33: -0.0595 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 79 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.8514 15.9063 16.4627 REMARK 3 T TENSOR REMARK 3 T11: 0.3657 T22: 0.3461 REMARK 3 T33: 0.0438 T12: -0.1169 REMARK 3 T13: -0.0073 T23: 0.0414 REMARK 3 L TENSOR REMARK 3 L11: 0.2093 L22: 1.3109 REMARK 3 L33: 2.0835 L12: -0.4573 REMARK 3 L13: 0.0787 L23: -0.3633 REMARK 3 S TENSOR REMARK 3 S11: 0.0406 S12: -0.0992 S13: -0.1143 REMARK 3 S21: -0.1284 S22: 0.1117 S23: 0.0642 REMARK 3 S31: 0.6088 S32: -0.3529 S33: -0.1524 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 136 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.0389 27.7647 5.5122 REMARK 3 T TENSOR REMARK 3 T11: 0.3593 T22: 0.2310 REMARK 3 T33: 0.1118 T12: -0.0220 REMARK 3 T13: -0.0173 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 2.9190 L22: 2.3167 REMARK 3 L33: 1.9883 L12: -1.0865 REMARK 3 L13: -0.2200 L23: 0.8346 REMARK 3 S TENSOR REMARK 3 S11: 0.2467 S12: 0.0189 S13: 0.2744 REMARK 3 S21: -0.1944 S22: -0.0487 S23: -0.3364 REMARK 3 S31: -0.5262 S32: 0.0858 S33: -0.1090 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 150 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3905 26.0301 18.1035 REMARK 3 T TENSOR REMARK 3 T11: 0.2924 T22: 0.3915 REMARK 3 T33: 0.0773 T12: 0.0152 REMARK 3 T13: -0.0142 T23: 0.0571 REMARK 3 L TENSOR REMARK 3 L11: 0.2879 L22: 0.8226 REMARK 3 L33: 2.4956 L12: -0.4229 REMARK 3 L13: 0.2238 L23: 0.1279 REMARK 3 S TENSOR REMARK 3 S11: -0.0459 S12: -0.0774 S13: 0.0617 REMARK 3 S21: 0.1144 S22: 0.1675 S23: 0.1482 REMARK 3 S31: -0.1800 S32: -0.6998 S33: -0.0578 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7V4G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1300023976. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40605 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 41.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.21070 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.6100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.12100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NJ4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM SULFATE DECAHYDRATE, 20% REMARK 280 (W/V) PEG 3350, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.89800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.44900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 U D 1 REMARK 465 U D 6 REMARK 465 G D 7 REMARK 465 C D 8 REMARK 465 U E 1 REMARK 465 U E 6 REMARK 465 G E 7 REMARK 465 C E 8 REMARK 465 U F 1 REMARK 465 U F 6 REMARK 465 G F 7 REMARK 465 C F 8 REMARK 465 SER A 73 REMARK 465 GLN A 74 REMARK 465 GLN A 75 REMARK 465 LEU A 76 REMARK 465 GLN A 77 REMARK 465 LYS A 78 REMARK 465 GLU A 79 REMARK 465 GLU A 80 REMARK 465 SER B 73 REMARK 465 GLN B 74 REMARK 465 GLN B 75 REMARK 465 LEU B 76 REMARK 465 GLN B 77 REMARK 465 LYS B 78 REMARK 465 SER C 73 REMARK 465 GLN C 74 REMARK 465 GLN C 75 REMARK 465 LEU C 76 REMARK 465 GLN C 77 REMARK 465 LYS C 78 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 115 CG CD OE1 OE2 REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 LYS A 147 CG CD CE NZ REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 GLU B 80 CG CD OE1 OE2 REMARK 470 GLN B 97 CG CD OE1 NE2 REMARK 470 GLU B 121 CG CD OE1 OE2 REMARK 470 LYS B 147 CG CD CE NZ REMARK 470 GLU B 178 CG CD OE1 OE2 REMARK 470 GLU B 241 CG CD OE1 OE2 REMARK 470 ARG B 249 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 79 CG CD OE1 OE2 REMARK 470 GLU C 80 CG CD OE1 OE2 REMARK 470 LYS C 84 CG CD CE NZ REMARK 470 GLN C 97 CG CD OE1 NE2 REMARK 470 LYS C 102 CG CD CE NZ REMARK 470 ARG C 106 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 109 CG CD OE1 OE2 REMARK 470 GLU C 115 CG CD OE1 OE2 REMARK 470 LYS C 116 CG CD CE NZ REMARK 470 LEU C 118 CG CD1 CD2 REMARK 470 GLU C 121 CG CD OE1 OE2 REMARK 470 LYS C 147 CG CD CE NZ REMARK 470 GLU C 163 CG CD OE1 OE2 REMARK 470 GLU C 166 CG CD OE1 OE2 REMARK 470 SER C 222 OG REMARK 470 LYS C 231 CG CD CE NZ REMARK 470 LYS C 235 CG CD CE NZ REMARK 470 ARG C 249 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 221 -25.06 74.40 REMARK 500 LEU B 94 -34.36 -150.25 REMARK 500 PHE B 221 -24.43 74.13 REMARK 500 PHE C 221 -19.65 73.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 204 NE2 REMARK 620 2 ASP A 206 OD1 91.1 REMARK 620 3 HIS A 266 NE2 96.4 104.0 REMARK 620 4 SO4 A 303 O1 88.7 102.3 153.1 REMARK 620 5 HOH A 473 O 164.2 103.2 86.9 81.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 204 NE2 REMARK 620 2 ASP B 206 OD1 96.0 REMARK 620 3 HIS B 266 NE2 94.5 92.2 REMARK 620 4 SO4 B 303 O4 102.6 89.1 162.7 REMARK 620 5 HOH B 410 O 170.5 83.3 95.0 68.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 204 NE2 REMARK 620 2 ASP C 206 OD1 87.7 REMARK 620 3 HIS C 266 NE2 101.0 96.0 REMARK 620 N 1 2 DBREF 7V4G D 1 8 PDB 7V4G 7V4G 1 8 DBREF 7V4G E 1 8 PDB 7V4G 7V4G 1 8 DBREF 7V4G F 1 8 PDB 7V4G 7V4G 1 8 DBREF 7V4G A 74 292 UNP Q6P6C2 ALKB5_HUMAN 74 292 DBREF 7V4G B 74 292 UNP Q6P6C2 ALKB5_HUMAN 74 292 DBREF 7V4G C 74 292 UNP Q6P6C2 ALKB5_HUMAN 74 292 SEQADV 7V4G SER A 73 UNP Q6P6C2 EXPRESSION TAG SEQADV 7V4G SER B 73 UNP Q6P6C2 EXPRESSION TAG SEQADV 7V4G SER C 73 UNP Q6P6C2 EXPRESSION TAG SEQRES 1 D 8 U G G 6MZ C U G C SEQRES 1 E 8 U G G 6MZ C U G C SEQRES 1 F 8 U G G 6MZ C U G C SEQRES 1 A 220 SER GLN GLN LEU GLN LYS GLU GLU GLU ALA ARG LYS VAL SEQRES 2 A 220 LYS SER GLY ILE ARG GLN MET ARG LEU PHE SER GLN ASP SEQRES 3 A 220 GLU CYS ALA LYS ILE GLU ALA ARG ILE ASP GLU VAL VAL SEQRES 4 A 220 SER ARG ALA GLU LYS GLY LEU TYR ASN GLU HIS THR VAL SEQRES 5 A 220 ASP ARG ALA PRO LEU ARG ASN LYS TYR PHE PHE GLY GLU SEQRES 6 A 220 GLY TYR THR TYR GLY ALA GLN LEU GLN LYS ARG GLY PRO SEQRES 7 A 220 GLY GLN GLU ARG LEU TYR PRO PRO GLY ASP VAL ASP GLU SEQRES 8 A 220 ILE PRO GLU TRP VAL HIS GLN LEU VAL ILE GLN LYS LEU SEQRES 9 A 220 VAL GLU HIS ARG VAL ILE PRO GLU GLY PHE VAL ASN SER SEQRES 10 A 220 ALA VAL ILE ASN ASP TYR GLN PRO GLY GLY CYS ILE VAL SEQRES 11 A 220 SER HIS VAL ASP PRO ILE HIS ILE PHE GLU ARG PRO ILE SEQRES 12 A 220 VAL SER VAL SER PHE PHE SER ASP SER ALA LEU CYS PHE SEQRES 13 A 220 GLY CYS LYS PHE GLN PHE LYS PRO ILE ARG VAL SER GLU SEQRES 14 A 220 PRO VAL LEU SER LEU PRO VAL ARG ARG GLY SER VAL THR SEQRES 15 A 220 VAL LEU SER GLY TYR ALA ALA ASP GLU ILE THR HIS CYS SEQRES 16 A 220 ILE ARG PRO GLN ASP ILE LYS GLU ARG ARG ALA VAL ILE SEQRES 17 A 220 ILE LEU ARG LYS THR ARG LEU ASP ALA PRO ARG LEU SEQRES 1 B 220 SER GLN GLN LEU GLN LYS GLU GLU GLU ALA ARG LYS VAL SEQRES 2 B 220 LYS SER GLY ILE ARG GLN MET ARG LEU PHE SER GLN ASP SEQRES 3 B 220 GLU CYS ALA LYS ILE GLU ALA ARG ILE ASP GLU VAL VAL SEQRES 4 B 220 SER ARG ALA GLU LYS GLY LEU TYR ASN GLU HIS THR VAL SEQRES 5 B 220 ASP ARG ALA PRO LEU ARG ASN LYS TYR PHE PHE GLY GLU SEQRES 6 B 220 GLY TYR THR TYR GLY ALA GLN LEU GLN LYS ARG GLY PRO SEQRES 7 B 220 GLY GLN GLU ARG LEU TYR PRO PRO GLY ASP VAL ASP GLU SEQRES 8 B 220 ILE PRO GLU TRP VAL HIS GLN LEU VAL ILE GLN LYS LEU SEQRES 9 B 220 VAL GLU HIS ARG VAL ILE PRO GLU GLY PHE VAL ASN SER SEQRES 10 B 220 ALA VAL ILE ASN ASP TYR GLN PRO GLY GLY CYS ILE VAL SEQRES 11 B 220 SER HIS VAL ASP PRO ILE HIS ILE PHE GLU ARG PRO ILE SEQRES 12 B 220 VAL SER VAL SER PHE PHE SER ASP SER ALA LEU CYS PHE SEQRES 13 B 220 GLY CYS LYS PHE GLN PHE LYS PRO ILE ARG VAL SER GLU SEQRES 14 B 220 PRO VAL LEU SER LEU PRO VAL ARG ARG GLY SER VAL THR SEQRES 15 B 220 VAL LEU SER GLY TYR ALA ALA ASP GLU ILE THR HIS CYS SEQRES 16 B 220 ILE ARG PRO GLN ASP ILE LYS GLU ARG ARG ALA VAL ILE SEQRES 17 B 220 ILE LEU ARG LYS THR ARG LEU ASP ALA PRO ARG LEU SEQRES 1 C 220 SER GLN GLN LEU GLN LYS GLU GLU GLU ALA ARG LYS VAL SEQRES 2 C 220 LYS SER GLY ILE ARG GLN MET ARG LEU PHE SER GLN ASP SEQRES 3 C 220 GLU CYS ALA LYS ILE GLU ALA ARG ILE ASP GLU VAL VAL SEQRES 4 C 220 SER ARG ALA GLU LYS GLY LEU TYR ASN GLU HIS THR VAL SEQRES 5 C 220 ASP ARG ALA PRO LEU ARG ASN LYS TYR PHE PHE GLY GLU SEQRES 6 C 220 GLY TYR THR TYR GLY ALA GLN LEU GLN LYS ARG GLY PRO SEQRES 7 C 220 GLY GLN GLU ARG LEU TYR PRO PRO GLY ASP VAL ASP GLU SEQRES 8 C 220 ILE PRO GLU TRP VAL HIS GLN LEU VAL ILE GLN LYS LEU SEQRES 9 C 220 VAL GLU HIS ARG VAL ILE PRO GLU GLY PHE VAL ASN SER SEQRES 10 C 220 ALA VAL ILE ASN ASP TYR GLN PRO GLY GLY CYS ILE VAL SEQRES 11 C 220 SER HIS VAL ASP PRO ILE HIS ILE PHE GLU ARG PRO ILE SEQRES 12 C 220 VAL SER VAL SER PHE PHE SER ASP SER ALA LEU CYS PHE SEQRES 13 C 220 GLY CYS LYS PHE GLN PHE LYS PRO ILE ARG VAL SER GLU SEQRES 14 C 220 PRO VAL LEU SER LEU PRO VAL ARG ARG GLY SER VAL THR SEQRES 15 C 220 VAL LEU SER GLY TYR ALA ALA ASP GLU ILE THR HIS CYS SEQRES 16 C 220 ILE ARG PRO GLN ASP ILE LYS GLU ARG ARG ALA VAL ILE SEQRES 17 C 220 ILE LEU ARG LYS THR ARG LEU ASP ALA PRO ARG LEU HET 6MZ D 4 23 HET 6MZ E 4 23 HET 6MZ F 4 23 HET GOL D 101 6 HET GOL E 101 6 HET MN A 301 1 HET GOL A 302 6 HET SO4 A 303 5 HET MN B 301 1 HET GOL B 302 6 HET SO4 B 303 5 HET MN C 301 1 HET SO4 C 302 5 HETNAM 6MZ N6-METHYLADENOSINE-5'-MONOPHOSPHATE HETNAM GOL GLYCEROL HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 6MZ 3(C11 H16 N5 O7 P) FORMUL 7 GOL 4(C3 H8 O3) FORMUL 9 MN 3(MN 2+) FORMUL 11 SO4 3(O4 S 2-) FORMUL 17 HOH *235(H2 O) HELIX 1 AA1 GLU A 81 GLY A 88 1 8 HELIX 2 AA2 SER A 96 LYS A 116 1 21 HELIX 3 AA3 ASN A 120 HIS A 122 5 3 HELIX 4 AA4 TYR A 141 LEU A 145 5 5 HELIX 5 AA5 PRO A 165 VAL A 172 1 8 HELIX 6 AA6 VAL A 172 HIS A 179 1 8 HELIX 7 AA7 SER A 257 GLU A 263 1 7 HELIX 8 AA8 ARG A 269 ILE A 273 5 5 HELIX 9 AA9 GLU B 80 SER B 87 1 8 HELIX 10 AB1 SER B 96 LYS B 116 1 21 HELIX 11 AB2 ASN B 120 HIS B 122 5 3 HELIX 12 AB3 TYR B 141 LEU B 145 5 5 HELIX 13 AB4 PRO B 165 VAL B 172 1 8 HELIX 14 AB5 VAL B 172 HIS B 179 1 8 HELIX 15 AB6 SER B 257 GLU B 263 1 7 HELIX 16 AB7 ARG B 269 ILE B 273 5 5 HELIX 17 AB8 GLU C 80 SER C 87 1 8 HELIX 18 AB9 SER C 96 LYS C 116 1 21 HELIX 19 AC1 ASN C 120 HIS C 122 5 3 HELIX 20 AC2 TYR C 141 LEU C 145 5 5 HELIX 21 AC3 PRO C 165 VAL C 172 1 8 HELIX 22 AC4 VAL C 172 HIS C 179 1 8 HELIX 23 AC5 GLY C 258 GLU C 263 1 6 HELIX 24 AC6 ARG C 269 ILE C 273 5 5 SHEET 1 AA1 7 ILE A 89 ARG A 93 0 SHEET 2 AA1 7 SER A 252 LEU A 256 -1 O VAL A 253 N MET A 92 SHEET 3 AA1 7 PHE A 211 PHE A 220 -1 N SER A 217 O THR A 254 SHEET 4 AA1 7 ARG A 277 THR A 285 -1 O LYS A 284 N GLU A 212 SHEET 5 AA1 7 SER A 189 TYR A 195 -1 N VAL A 191 O ILE A 281 SHEET 6 AA1 7 ARG A 130 PHE A 135 -1 N ASN A 131 O ASP A 194 SHEET 7 AA1 7 VAL A 124 ALA A 127 -1 N ASP A 125 O LYS A 132 SHEET 1 AA2 4 ILE A 201 HIS A 204 0 SHEET 2 AA2 4 HIS A 266 ILE A 268 -1 O HIS A 266 N HIS A 204 SHEET 3 AA2 4 SER A 224 PHE A 228 -1 N CYS A 227 O CYS A 267 SHEET 4 AA2 4 LEU A 244 VAL A 248 -1 O LEU A 246 N LEU A 226 SHEET 1 AA3 2 PHE A 232 GLN A 233 0 SHEET 2 AA3 2 ARG A 238 VAL A 239 -1 O ARG A 238 N GLN A 233 SHEET 1 AA4 7 ILE B 89 ARG B 93 0 SHEET 2 AA4 7 SER B 252 LEU B 256 -1 O VAL B 255 N ARG B 90 SHEET 3 AA4 7 ILE B 215 PHE B 220 -1 N SER B 217 O THR B 254 SHEET 4 AA4 7 ARG B 277 ARG B 283 -1 O LEU B 282 N VAL B 216 SHEET 5 AA4 7 SER B 189 TYR B 195 -1 N TYR B 195 O ARG B 277 SHEET 6 AA4 7 ARG B 130 PHE B 135 -1 N PHE B 135 O ALA B 190 SHEET 7 AA4 7 VAL B 124 ALA B 127 -1 N ASP B 125 O LYS B 132 SHEET 1 AA5 4 ILE B 201 HIS B 204 0 SHEET 2 AA5 4 HIS B 266 ILE B 268 -1 O HIS B 266 N HIS B 204 SHEET 3 AA5 4 SER B 224 PHE B 228 -1 N CYS B 227 O CYS B 267 SHEET 4 AA5 4 LEU B 244 VAL B 248 -1 O LEU B 246 N LEU B 226 SHEET 1 AA6 2 PHE B 232 GLN B 233 0 SHEET 2 AA6 2 ARG B 238 VAL B 239 -1 O ARG B 238 N GLN B 233 SHEET 1 AA7 7 ILE C 89 ARG C 93 0 SHEET 2 AA7 7 SER C 252 LEU C 256 -1 O VAL C 255 N ARG C 90 SHEET 3 AA7 7 PHE C 211 PHE C 220 -1 N SER C 217 O THR C 254 SHEET 4 AA7 7 ARG C 277 THR C 285 -1 O LYS C 284 N GLU C 212 SHEET 5 AA7 7 SER C 189 TYR C 195 -1 N VAL C 191 O ILE C 281 SHEET 6 AA7 7 ARG C 130 PHE C 135 -1 N ASN C 131 O ASP C 194 SHEET 7 AA7 7 VAL C 124 ARG C 126 -1 N ASP C 125 O LYS C 132 SHEET 1 AA8 4 ILE C 201 HIS C 204 0 SHEET 2 AA8 4 HIS C 266 ILE C 268 -1 O HIS C 266 N HIS C 204 SHEET 3 AA8 4 SER C 224 PHE C 228 -1 N CYS C 227 O CYS C 267 SHEET 4 AA8 4 LEU C 244 VAL C 248 -1 O LEU C 246 N LEU C 226 SHEET 1 AA9 2 PHE C 232 GLN C 233 0 SHEET 2 AA9 2 ARG C 238 VAL C 239 -1 O ARG C 238 N GLN C 233 LINK O3' G D 3 P 6MZ D 4 1555 1555 1.61 LINK O3' 6MZ D 4 P C D 5 1555 1555 1.60 LINK O3' G E 3 P 6MZ E 4 1555 1555 1.60 LINK O3' 6MZ E 4 P C E 5 1555 1555 1.60 LINK O3' G F 3 P 6MZ F 4 1555 1555 1.61 LINK O3' 6MZ F 4 P C F 5 1555 1555 1.59 LINK NE2 HIS A 204 MN MN A 301 1555 1555 2.52 LINK OD1 ASP A 206 MN MN A 301 1555 1555 2.20 LINK NE2 HIS A 266 MN MN A 301 1555 1555 2.09 LINK MN MN A 301 O1 SO4 A 303 1555 1555 2.17 LINK MN MN A 301 O HOH A 473 1555 1555 2.32 LINK NE2 HIS B 204 MN MN B 301 1555 1555 2.32 LINK OD1 ASP B 206 MN MN B 301 1555 1555 2.50 LINK NE2 HIS B 266 MN MN B 301 1555 1555 2.16 LINK MN MN B 301 O4 SO4 B 303 1555 1555 1.88 LINK MN MN B 301 O HOH B 410 1555 1555 2.42 LINK NE2 HIS C 204 MN MN C 301 1555 1555 2.56 LINK OD1 ASP C 206 MN MN C 301 1555 1555 2.53 LINK NE2 HIS C 266 MN MN C 301 1555 1555 2.38 CISPEP 1 ARG A 213 PRO A 214 0 1.32 CISPEP 2 LYS A 235 PRO A 236 0 -2.78 CISPEP 3 ARG B 213 PRO B 214 0 2.14 CISPEP 4 LYS B 235 PRO B 236 0 -2.24 CISPEP 5 ARG C 213 PRO C 214 0 3.85 CISPEP 6 LYS C 235 PRO C 236 0 -4.16 CRYST1 76.474 76.474 106.347 90.00 90.00 120.00 P 32 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013076 0.007550 0.000000 0.00000 SCALE2 0.000000 0.015099 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009403 0.00000