HEADER HYDROLASE 16-AUG-21 7V55 TITLE CRYSTAL STRUCTURE OF PHOSPHOLIPASE D FROM PSEUDOMONAS AERUGINOSA PAO1 TITLE 2 USING IN SITU PROTEOLYSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPASE D; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 GENE: PLDA, PA3487; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHOSPHOLIPASE D, TOXIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.YANG,Z.LI REVDAT 3 29-NOV-23 7V55 1 REMARK REVDAT 2 01-MAR-23 7V55 1 JRNL REVDAT 1 17-AUG-22 7V55 0 JRNL AUTH X.YANG,Z.LI,L.ZHAO,Z.SHE,Z.GAO,S.F.SUI,Y.DONG,Y.LI JRNL TITL STRUCTURAL INSIGHTS INTO PA3488-MEDIATED INACTIVATION OF JRNL TITL 2 PSEUDOMONAS AERUGINOSA PLDA. JRNL REF NAT COMMUN V. 13 5979 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36216841 JRNL DOI 10.1038/S41467-022-33690-2 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 19226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 69.3400 - 5.7400 0.97 2878 148 0.1677 0.2156 REMARK 3 2 5.7400 - 4.5600 0.99 2759 149 0.1632 0.2359 REMARK 3 3 4.5500 - 3.9800 0.99 2731 134 0.1698 0.2146 REMARK 3 4 3.9800 - 3.6200 0.65 1774 96 0.2047 0.2521 REMARK 3 5 3.6200 - 3.3600 0.99 2731 134 0.2294 0.3219 REMARK 3 6 3.3600 - 3.1600 1.00 2752 121 0.2366 0.2852 REMARK 3 7 3.1600 - 3.0000 0.99 2672 147 0.2662 0.3380 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7V55 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1300024027. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19242 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 72.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.73400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7V53 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM PHOSPHATE DIBASIC, 20% REMARK 280 W/V POLYETHYLENE GLYCOL 3350, EVAPORATION, TEMPERATURE 291.1K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.77833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 161.55667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 161.55667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 80.77833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 GLN A 3 REMARK 465 LYS A 4 REMARK 465 LYS A 5 REMARK 465 PRO A 6 REMARK 465 TYR A 7 REMARK 465 ASN A 8 REMARK 465 GLY A 9 REMARK 465 LEU A 10 REMARK 465 HIS A 11 REMARK 465 GLU A 12 REMARK 465 LYS A 13 REMARK 465 GLU A 14 REMARK 465 LEU A 15 REMARK 465 ASN A 16 REMARK 465 GLN A 17 REMARK 465 ILE A 18 REMARK 465 ASN A 19 REMARK 465 GLN A 20 REMARK 465 GLN A 21 REMARK 465 ASP A 22 REMARK 465 GLY A 23 REMARK 465 SER A 24 REMARK 465 PRO A 25 REMARK 465 CYS A 26 REMARK 465 VAL A 27 REMARK 465 ALA A 28 REMARK 465 ILE A 29 REMARK 465 SER A 30 REMARK 465 ALA A 31 REMARK 465 PRO A 32 REMARK 465 GLY A 33 REMARK 465 CYS A 34 REMARK 465 PHE A 35 REMARK 465 ILE A 36 REMARK 465 LYS A 37 REMARK 465 GLY A 38 REMARK 465 SER A 119 REMARK 465 GLY A 120 REMARK 465 SER A 121 REMARK 465 LEU A 122 REMARK 465 GLY A 123 REMARK 465 THR A 124 REMARK 465 TYR A 125 REMARK 465 ASP A 221 REMARK 465 GLU A 222 REMARK 465 HIS A 223 REMARK 465 VAL A 224 REMARK 465 SER A 225 REMARK 465 SER A 226 REMARK 465 MET A 227 REMARK 465 GLY A 228 REMARK 465 LEU A 229 REMARK 465 MET A 230 REMARK 465 MET A 231 REMARK 465 ALA A 232 REMARK 465 THR A 233 REMARK 465 LEU A 234 REMARK 465 PHE A 235 REMARK 465 ASP A 236 REMARK 465 LEU A 237 REMARK 465 SER A 238 REMARK 465 ARG A 239 REMARK 465 PRO A 240 REMARK 465 LEU A 241 REMARK 465 ALA A 242 REMARK 465 SER A 243 REMARK 465 LEU A 244 REMARK 465 THR A 245 REMARK 465 LEU A 246 REMARK 465 HIS A 247 REMARK 465 ALA A 248 REMARK 465 PRO A 249 REMARK 465 THR A 250 REMARK 465 LEU A 251 REMARK 465 ARG A 252 REMARK 465 LEU A 253 REMARK 465 SER A 254 REMARK 465 PRO A 255 REMARK 465 PHE A 256 REMARK 465 PRO A 257 REMARK 465 HIS A 258 REMARK 465 ILE A 259 REMARK 465 ALA A 260 REMARK 465 ALA A 261 REMARK 465 SER A 262 REMARK 465 ASP A 263 REMARK 465 GLU A 264 REMARK 465 PRO A 265 REMARK 465 LEU A 266 REMARK 465 LEU A 267 REMARK 465 SER A 268 REMARK 465 ILE A 269 REMARK 465 PRO A 270 REMARK 465 LEU A 271 REMARK 465 ALA A 272 REMARK 465 PRO A 273 REMARK 465 SER A 274 REMARK 465 ARG A 275 REMARK 465 ALA A 276 REMARK 465 ARG A 277 REMARK 465 ALA A 278 REMARK 465 LEU A 279 REMARK 465 ASN A 280 REMARK 465 GLY A 281 REMARK 465 ALA A 282 REMARK 465 ALA A 283 REMARK 465 TYR A 284 REMARK 465 LEU A 285 REMARK 465 SER A 286 REMARK 465 ASP A 287 REMARK 465 LEU A 288 REMARK 465 PHE A 289 REMARK 465 ARG A 290 REMARK 465 SER A 291 REMARK 465 PRO A 292 REMARK 465 MET A 293 REMARK 465 LEU A 294 REMARK 465 PRO A 295 REMARK 465 SER A 296 REMARK 465 LEU A 297 REMARK 465 GLN A 298 REMARK 465 TRP A 299 REMARK 465 LEU A 300 REMARK 465 GLY A 301 REMARK 465 ARG A 302 REMARK 465 ALA A 303 REMARK 465 TYR A 304 REMARK 465 ASN A 305 REMARK 465 SER A 306 REMARK 465 SER A 307 REMARK 465 LYS A 308 REMARK 465 GLU A 309 REMARK 465 GLY A 310 REMARK 465 LEU A 311 REMARK 465 ASP A 312 REMARK 465 GLU A 313 REMARK 465 GLY A 314 REMARK 465 PHE A 315 REMARK 465 GLU A 316 REMARK 465 ARG A 317 REMARK 465 LEU A 318 REMARK 465 ASP A 319 REMARK 465 ALA A 320 REMARK 465 LEU A 321 REMARK 465 ARG A 322 REMARK 465 ARG A 323 REMARK 465 GLN A 324 REMARK 465 MET A 325 REMARK 465 VAL A 326 REMARK 465 ALA A 327 REMARK 465 SER A 328 REMARK 465 SER A 329 REMARK 465 ILE A 330 REMARK 465 ARG A 331 REMARK 465 ALA A 332 REMARK 465 ILE A 333 REMARK 465 ALA A 334 REMARK 465 ASN A 335 REMARK 465 LEU A 336 REMARK 465 ILE A 337 REMARK 465 ALA A 338 REMARK 465 ASP A 339 REMARK 465 ASN A 340 REMARK 465 LEU A 341 REMARK 465 ASP A 342 REMARK 465 ALA A 343 REMARK 465 LEU A 344 REMARK 465 PRO A 345 REMARK 465 ILE A 346 REMARK 465 GLU A 347 REMARK 465 PRO A 348 REMARK 465 GLU A 349 REMARK 465 LEU A 350 REMARK 465 GLU A 351 REMARK 465 ARG A 352 REMARK 465 ARG A 353 REMARK 465 LEU A 354 REMARK 465 ARG A 355 REMARK 465 ALA A 356 REMARK 465 TRP A 357 REMARK 465 LEU A 358 REMARK 465 GLU A 359 REMARK 465 GLU A 360 REMARK 465 LEU A 361 REMARK 465 ARG A 362 REMARK 465 THR A 363 REMARK 465 ALA A 364 REMARK 465 ALA A 365 REMARK 465 LEU A 366 REMARK 465 ASN A 367 REMARK 465 LEU A 368 REMARK 465 PRO A 369 REMARK 465 GLU A 370 REMARK 465 ALA A 371 REMARK 465 LEU A 372 REMARK 465 ARG A 373 REMARK 465 ILE A 374 REMARK 465 LYS A 375 REMARK 465 SER A 376 REMARK 465 LEU A 377 REMARK 465 LEU A 378 REMARK 465 LEU A 379 REMARK 465 ILE A 380 REMARK 465 ASN A 381 REMARK 465 GLN A 382 REMARK 465 TRP A 383 REMARK 465 MET A 384 REMARK 465 SER A 385 REMARK 465 GLU A 386 REMARK 465 THR A 387 REMARK 465 GLU A 388 REMARK 465 LEU A 389 REMARK 465 GLY A 390 REMARK 465 GLN A 391 REMARK 465 VAL A 392 REMARK 465 LEU A 393 REMARK 465 THR A 394 REMARK 465 LEU A 395 REMARK 465 ILE A 396 REMARK 465 SER A 397 REMARK 465 GLY A 398 REMARK 465 LYS A 399 REMARK 465 GLY A 400 REMARK 465 PHE A 401 REMARK 465 GLU A 402 REMARK 465 ASP A 403 REMARK 465 ILE A 404 REMARK 465 PRO A 405 REMARK 465 GLN A 406 REMARK 465 ASN A 407 REMARK 465 LEU A 408 REMARK 465 SER A 409 REMARK 465 GLY A 410 REMARK 465 LYS A 411 REMARK 465 ALA A 412 REMARK 465 GLY A 413 REMARK 465 GLU A 414 REMARK 465 LEU A 415 REMARK 465 ALA A 416 REMARK 465 GLY A 417 REMARK 465 SER A 418 REMARK 465 LEU A 419 REMARK 465 PHE A 420 REMARK 465 TRP A 421 REMARK 465 THR A 422 REMARK 465 LEU A 423 REMARK 465 HIS A 424 REMARK 465 ARG A 425 REMARK 465 LEU A 426 REMARK 465 MET A 427 REMARK 465 GLN A 428 REMARK 465 ALA A 429 REMARK 465 ARG A 430 REMARK 465 ALA A 431 REMARK 465 GLY A 432 REMARK 465 GLY A 433 REMARK 465 HIS A 434 REMARK 465 GLN A 435 REMARK 465 GLN A 436 REMARK 465 PRO A 437 REMARK 465 TYR A 438 REMARK 465 ARG A 439 REMARK 465 TYR A 440 REMARK 465 LEU A 441 REMARK 465 ASP A 442 REMARK 465 GLU A 443 REMARK 465 ALA A 444 REMARK 465 PRO A 445 REMARK 465 GLN A 446 REMARK 465 PRO A 447 REMARK 465 LEU A 448 REMARK 465 ALA A 449 REMARK 465 SER A 450 REMARK 465 PRO A 451 REMARK 465 ALA A 523 REMARK 465 ALA A 524 REMARK 465 ALA A 525 REMARK 465 GLY A 526 REMARK 465 LEU A 527 REMARK 465 GLU A 528 REMARK 465 ASN A 529 REMARK 465 TYR A 530 REMARK 465 LEU A 531 REMARK 465 ASP A 532 REMARK 465 GLU A 533 REMARK 465 LYS A 534 REMARK 465 ARG A 535 REMARK 465 ASN A 536 REMARK 465 LEU A 537 REMARK 465 ARG A 538 REMARK 465 LEU A 539 REMARK 465 HIS A 1075 REMARK 465 GLN A 1076 REMARK 465 ASP A 1077 REMARK 465 SER A 1078 REMARK 465 ARG A 1079 REMARK 465 SER A 1080 REMARK 465 LEU A 1081 REMARK 465 PRO A 1082 REMARK 465 THR A 1083 REMARK 465 GLN A 1084 REMARK 465 VAL A 1085 REMARK 465 ALA A 1086 REMARK 465 MET A 1087 REMARK 465 ASN A 1088 REMARK 465 GLY A 1089 REMARK 465 ASP A 1090 REMARK 465 SER A 1091 REMARK 465 SER A 1092 REMARK 465 ALA A 1093 REMARK 465 GLN A 1094 REMARK 465 GLY A 1095 REMARK 465 LYS A 1096 REMARK 465 HIS A 1097 REMARK 465 ARG A 1098 REMARK 465 THR A 1099 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 50 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 126 CG OD1 OD2 REMARK 470 MET A 130 CG SD CE REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 LEU A 495 CG CD1 CD2 REMARK 470 GLU A 671 CG CD OE1 OE2 REMARK 470 ARG A 698 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 699 CG CD OE1 NE2 REMARK 470 ARG A 818 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 988 CG CD OE1 OE2 REMARK 470 LYS A 991 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 45 138.73 -33.60 REMARK 500 SER A 72 -49.89 -147.69 REMARK 500 TYR A 84 -7.46 -59.29 REMARK 500 ARG A 91 -43.32 -148.35 REMARK 500 THR A 149 86.94 -177.07 REMARK 500 GLN A 154 32.73 -142.00 REMARK 500 ASP A 156 35.55 -93.58 REMARK 500 GLN A 158 -134.47 53.37 REMARK 500 ASP A 174 26.32 49.90 REMARK 500 ARG A 176 -31.66 -132.83 REMARK 500 ASP A 192 -163.29 -109.93 REMARK 500 ASN A 209 95.51 -176.22 REMARK 500 ALA A 457 151.97 -47.98 REMARK 500 GLU A 558 128.41 -38.87 REMARK 500 SER A 606 49.78 -109.83 REMARK 500 PHE A 630 84.83 -153.34 REMARK 500 PHE A 634 16.41 -140.12 REMARK 500 GLU A 639 0.73 82.10 REMARK 500 ARG A 654 -3.31 -160.35 REMARK 500 ARG A 676 16.32 59.09 REMARK 500 LEU A 680 40.94 -74.01 REMARK 500 ASP A 682 70.24 -67.28 REMARK 500 LEU A 716 -73.47 -46.83 REMARK 500 LYS A 802 -6.96 -140.24 REMARK 500 ASP A 816 -161.69 -107.60 REMARK 500 ARG A 818 24.59 -76.15 REMARK 500 ARG A 838 135.13 -173.39 REMARK 500 SER A 856 144.48 -39.28 REMARK 500 ASP A 862 15.41 55.28 REMARK 500 ARG A 882 -109.59 -114.54 REMARK 500 ARG A 899 77.67 -102.71 REMARK 500 ILE A 946 53.30 -140.57 REMARK 500 PRO A 990 -179.20 -62.30 REMARK 500 ASP A 995 -18.48 79.79 REMARK 500 PRO A1010 6.99 -62.60 REMARK 500 PRO A1055 99.57 -64.80 REMARK 500 THR A1059 -3.12 78.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1100 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 194 OD2 REMARK 620 2 GLY A 929 O 83.4 REMARK 620 3 GLY A 931 O 129.0 75.8 REMARK 620 N 1 2 DBREF 7V55 A 1 1099 UNP Q9HYC2 Q9HYC2_PSEAE 1 1099 SEQRES 1 A 1099 MET LEU GLN LYS LYS PRO TYR ASN GLY LEU HIS GLU LYS SEQRES 2 A 1099 GLU LEU ASN GLN ILE ASN GLN GLN ASP GLY SER PRO CYS SEQRES 3 A 1099 VAL ALA ILE SER ALA PRO GLY CYS PHE ILE LYS GLY SER SEQRES 4 A 1099 ASN LEU PHE SER GLU LYS ARG ALA GLY ASN ARG VAL ARG SEQRES 5 A 1099 PHE PHE THR THR GLY ARG ASP TYR PHE SER ASP LEU ALA SEQRES 6 A 1099 SER ALA LEU ASP SER ALA SER SER SER ILE PHE ILE THR SEQRES 7 A 1099 GLY TRP GLN VAL ASN TYR ASP VAL LEU LEU ASP GLY ARG SEQRES 8 A 1099 ARG SER LEU TRP GLN CYS LEU ARG GLN ALA LEU GLU ARG SEQRES 9 A 1099 SER PRO ALA LEU LYS VAL TYR VAL MET PRO TRP LEU SER SEQRES 10 A 1099 PRO SER GLY SER LEU GLY THR TYR ASP PHE GLU THR MET SEQRES 11 A 1099 LEU ALA VAL PHE GLN LEU ASN ALA GLY LEU GLU GLY GLY SEQRES 12 A 1099 ALA ARG ALA PHE CYS THR PRO ALA ILE GLN GLN SER ASP SEQRES 13 A 1099 MET GLN GLY LEU GLY VAL ALA PHE SER HIS HIS GLN LYS SEQRES 14 A 1099 SER VAL VAL ILE ASP ASN ARG ILE GLY TYR VAL GLY GLY SEQRES 15 A 1099 ILE ASP LEU ALA TYR GLY ARG ARG ASP ASP ASN ASP PHE SEQRES 16 A 1099 SER LEU ASP ALA SER GLY ARG ARG GLY ASN ASP ALA TYR SEQRES 17 A 1099 ASN PRO GLY LEU PRO HIS LEU GLY TRP MET ALA GLU ASP SEQRES 18 A 1099 GLU HIS VAL SER SER MET GLY LEU MET MET ALA THR LEU SEQRES 19 A 1099 PHE ASP LEU SER ARG PRO LEU ALA SER LEU THR LEU HIS SEQRES 20 A 1099 ALA PRO THR LEU ARG LEU SER PRO PHE PRO HIS ILE ALA SEQRES 21 A 1099 ALA SER ASP GLU PRO LEU LEU SER ILE PRO LEU ALA PRO SEQRES 22 A 1099 SER ARG ALA ARG ALA LEU ASN GLY ALA ALA TYR LEU SER SEQRES 23 A 1099 ASP LEU PHE ARG SER PRO MET LEU PRO SER LEU GLN TRP SEQRES 24 A 1099 LEU GLY ARG ALA TYR ASN SER SER LYS GLU GLY LEU ASP SEQRES 25 A 1099 GLU GLY PHE GLU ARG LEU ASP ALA LEU ARG ARG GLN MET SEQRES 26 A 1099 VAL ALA SER SER ILE ARG ALA ILE ALA ASN LEU ILE ALA SEQRES 27 A 1099 ASP ASN LEU ASP ALA LEU PRO ILE GLU PRO GLU LEU GLU SEQRES 28 A 1099 ARG ARG LEU ARG ALA TRP LEU GLU GLU LEU ARG THR ALA SEQRES 29 A 1099 ALA LEU ASN LEU PRO GLU ALA LEU ARG ILE LYS SER LEU SEQRES 30 A 1099 LEU LEU ILE ASN GLN TRP MET SER GLU THR GLU LEU GLY SEQRES 31 A 1099 GLN VAL LEU THR LEU ILE SER GLY LYS GLY PHE GLU ASP SEQRES 32 A 1099 ILE PRO GLN ASN LEU SER GLY LYS ALA GLY GLU LEU ALA SEQRES 33 A 1099 GLY SER LEU PHE TRP THR LEU HIS ARG LEU MET GLN ALA SEQRES 34 A 1099 ARG ALA GLY GLY HIS GLN GLN PRO TYR ARG TYR LEU ASP SEQRES 35 A 1099 GLU ALA PRO GLN PRO LEU ALA SER PRO ASP ASN ALA ARG SEQRES 36 A 1099 LEU ALA ALA ASP GLN PRO ARG MET PRO TRP GLN ASP VAL SEQRES 37 A 1099 HIS CYS ARG ILE GLU GLY PRO SER VAL TYR ASP LEU ALA SEQRES 38 A 1099 ARG ASN PHE ILE ASP ARG TRP ASN GLY GLN GLN ALA TYR SEQRES 39 A 1099 LEU ALA LYS THR PRO ALA LEU GLN ASP THR ALA LEU VAL SEQRES 40 A 1099 ARG SER ALA LEU GLU ALA VAL MET LYS TRP LEU ASN SER SEQRES 41 A 1099 LEU ALA ALA ALA ALA GLY LEU GLU ASN TYR LEU ASP GLU SEQRES 42 A 1099 LYS ARG ASN LEU ARG LEU GLU LEU ASP PRO PRO THR PRO SEQRES 43 A 1099 CYS TRP ILE ASN ALA PRO GLU GLN LEU PRO GLN GLU PRO SEQRES 44 A 1099 GLU VAL ARG ARG GLY GLY MET THR VAL GLN VAL LEU ARG SEQRES 45 A 1099 SER ALA ALA ALA ARG MET LEU GLU GLN GLU GLN ALA GLY SEQRES 46 A 1099 ARG LEU GLY ALA GLY VAL ASN LEU PRO LEU GLN VAL GLY SEQRES 47 A 1099 VAL SER THR GLU GLY VAL GLN SER ASN CYS LYS ASP ALA SEQRES 48 A 1099 MET LEU LEU ALA ILE SER GLY ALA GLN GLN PHE ILE TYR SEQRES 49 A 1099 ILE GLU ASN GLN PHE PHE GLN SER GLU PHE GLY LYS GLU SEQRES 50 A 1099 GLY GLU VAL PHE LYS ASP LEU PRO LEU SER GLY PRO MET SEQRES 51 A 1099 ALA SER LEU ARG ASP VAL GLY SER LEU ARG ARG ASP PHE SEQRES 52 A 1099 VAL VAL ARG ILE ARG LEU GLU GLU ALA LEU GLU GLN ARG SEQRES 53 A 1099 ASP LEU TRP LEU LEU ASP TRP ALA GLU VAL GLU LYS ILE SEQRES 54 A 1099 ALA GLN GLU PRO GLY THR GLU ALA ARG GLN PHE LEU LYS SEQRES 55 A 1099 SER MET LEU ALA MET TRP GLY VAL ASN ALA GLN GLY TRP SEQRES 56 A 1099 LEU THR HIS LYS LEU GLY GLU ALA GLN HIS GLY LEU LEU SEQRES 57 A 1099 ASN GLU ILE GLY GLU ALA LEU ALA ARG ARG ILE GLU ARG SEQRES 58 A 1099 ALA ILE GLN ARG GLU HIS PRO PHE HIS VAL TYR LEU VAL SEQRES 59 A 1099 LEU PRO VAL HIS PRO GLU GLY ALA LEU ASN VAL PRO ASN SEQRES 60 A 1099 ILE MET HIS GLN VAL HIS LEU THR GLN GLN SER LEU VAL SEQRES 61 A 1099 PHE GLY GLU GLN SER LEU VAL LYS ARG ILE GLN ARG GLN SEQRES 62 A 1099 MET ALA LEU LYS ALA LEU GLU GLY LYS SER ASP PRO ALA SEQRES 63 A 1099 GLN ALA ARG GLU ILE ILE GLU ARG LYS ASP ALA ARG GLY SEQRES 64 A 1099 ARG PRO VAL TYR GLU GLN GLN ASP TRP SER ARG TYR LEU SEQRES 65 A 1099 THR LEU LEU ASN LEU ARG THR TRP ALA VAL LEU GLY GLY SEQRES 66 A 1099 ARG VAL VAL THR GLU GLN ILE TYR VAL HIS SER LYS LEU SEQRES 67 A 1099 LEU ILE ALA ASP ASP ARG VAL ALA ILE LEU GLY SER ALA SEQRES 68 A 1099 ASN ILE ASN ASP ARG SER LEU GLN GLY GLU ARG ASP SER SEQRES 69 A 1099 GLU LEU ALA VAL MET VAL ARG ASP SER GLU PRO LEU THR SEQRES 70 A 1099 VAL ARG LEU ASP GLY LYS ASN ASP ALA ILE VAL GLY LYS SEQRES 71 A 1099 ALA ILE HIS GLN LEU ARG VAL ASN LEU TRP LYS LYS HIS SEQRES 72 A 1099 PHE GLY LEU SER GLN GLY PRO GLY GLY PHE VAL LYS PRO SEQRES 73 A 1099 ALA SER GLU LEU SER ALA TYR LEU SER ILE PRO ALA ALA SEQRES 74 A 1099 GLN GLU ALA TRP GLU ALA ILE GLN THR LEU ALA LYS GLU SEQRES 75 A 1099 ASN THR ARG ALA TYR GLU ARG THR PHE ASN PHE ILE PRO SEQRES 76 A 1099 GLN ASN ILE SER GLN THR GLN LEU GLN LEU THR PRO GLU SEQRES 77 A 1099 PRO PRO LYS GLY PHE GLU ASP GLY PHE PRO ALA SER ILE SEQRES 78 A 1099 TRP PRO THR TRP ALA TYR ARG LYS PRO GLY GLU LEU ARG SEQRES 79 A 1099 ALA GLY GLY GLN LEU MET GLU PRO MET PRO TYR GLN GLU SEQRES 80 A 1099 ILE PHE TRP ARG SER SER ASN LEU THR SER VAL LYS THR SEQRES 81 A 1099 PHE PRO PRO PRO ASN GLY VAL SER GLY PHE ILE THR ALA SEQRES 82 A 1099 LEU PRO THR SER TRP THR ARG GLY GLU ARG ASN ASP SER SEQRES 83 A 1099 GLY LEU ASN LEU SER ILE LEU ALA HIS GLN ASP SER ARG SEQRES 84 A 1099 SER LEU PRO THR GLN VAL ALA MET ASN GLY ASP SER SER SEQRES 85 A 1099 ALA GLN GLY LYS HIS ARG THR HET CA A1100 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ FORMUL 3 HOH *3(H2 O) HELIX 1 AA1 THR A 56 ASP A 69 1 14 HELIX 2 AA2 SER A 93 SER A 105 1 13 HELIX 3 AA3 PHE A 127 ALA A 138 1 12 HELIX 4 AA4 MET A 157 PHE A 164 5 8 HELIX 5 AA5 ASP A 198 ARG A 202 5 5 HELIX 6 AA6 ARG A 203 ALA A 207 5 5 HELIX 7 AA7 SER A 476 TYR A 494 1 19 HELIX 8 AA8 ALA A 500 SER A 520 1 21 HELIX 9 AA9 ALA A 575 ALA A 589 1 15 HELIX 10 AB1 ASN A 607 GLY A 618 1 12 HELIX 11 AB2 SER A 647 ASP A 655 1 9 HELIX 12 AB3 VAL A 656 LEU A 659 5 4 HELIX 13 AB4 ARG A 660 ILE A 667 1 8 HELIX 14 AB5 ARG A 668 ARG A 676 1 9 HELIX 15 AB6 ASP A 682 GLU A 692 1 11 HELIX 16 AB7 GLY A 694 LEU A 720 1 27 HELIX 17 AB8 GLU A 730 GLU A 746 1 17 HELIX 18 AB9 VAL A 765 VAL A 780 1 16 HELIX 19 AC1 SER A 785 LEU A 799 1 15 HELIX 20 AC2 ASP A 804 ILE A 812 1 9 HELIX 21 AC3 PRO A 821 GLN A 826 5 6 HELIX 22 AC4 ASP A 827 ARG A 830 5 4 HELIX 23 AC5 ASN A 874 GLN A 879 1 6 HELIX 24 AC6 LYS A 910 PHE A 924 1 15 HELIX 25 AC7 ALA A 937 SER A 941 5 5 HELIX 26 AC8 ALA A 949 PHE A 971 1 23 HELIX 27 AC9 GLU A 1012 ALA A 1015 5 4 HELIX 28 AD1 GLN A 1026 TRP A 1030 5 5 HELIX 29 AD2 ASN A 1069 ALA A 1074 1 6 SHEET 1 AA115 ALA A 146 CYS A 148 0 SHEET 2 AA115 LYS A 109 PRO A 114 1 N VAL A 110 O PHE A 147 SHEET 3 AA115 SER A 74 GLY A 79 1 N ILE A 75 O TYR A 111 SHEET 4 AA115 SER A 170 ILE A 173 -1 O VAL A 172 N PHE A 76 SHEET 5 AA115 ILE A 177 GLY A 181 -1 O TYR A 179 N VAL A 171 SHEET 6 AA115 HIS A 469 GLU A 473 -1 O ILE A 472 N GLY A 178 SHEET 7 AA115 ARG A 46 PHE A 54 -1 N ARG A 50 O GLU A 473 SHEET 8 AA115 MET A 566 ALA A 574 -1 O MET A 566 N ASN A 49 SHEET 9 AA115 GLU A 885 ASP A 892 -1 O ALA A 887 N LEU A 571 SHEET 10 AA115 VAL A 865 GLY A 869 -1 N LEU A 868 O VAL A 888 SHEET 11 AA115 LYS A 857 ALA A 861 -1 N LEU A 859 O ILE A 867 SHEET 12 AA115 PHE A 622 ASN A 627 -1 N TYR A 624 O ILE A 860 SHEET 13 AA115 HIS A 750 LEU A 755 1 O TYR A 752 N ILE A 623 SHEET 14 AA115 LEU A 832 LEU A 843 1 O LEU A 835 N LEU A 753 SHEET 15 AA115 ARG A 846 GLN A 851 -1 O ARG A 846 N LEU A 843 SHEET 1 AA2 9 GLN A 605 SER A 606 0 SHEET 2 AA2 9 MET A 566 ALA A 574 -1 N ALA A 574 O GLN A 605 SHEET 3 AA2 9 GLU A 885 ASP A 892 -1 O ALA A 887 N LEU A 571 SHEET 4 AA2 9 VAL A 865 GLY A 869 -1 N LEU A 868 O VAL A 888 SHEET 5 AA2 9 LYS A 857 ALA A 861 -1 N LEU A 859 O ILE A 867 SHEET 6 AA2 9 PHE A 622 ASN A 627 -1 N TYR A 624 O ILE A 860 SHEET 7 AA2 9 HIS A 750 LEU A 755 1 O TYR A 752 N ILE A 623 SHEET 8 AA2 9 LEU A 832 LEU A 843 1 O LEU A 835 N LEU A 753 SHEET 9 AA2 9 ILE A1051 ALA A1053 -1 O THR A1052 N ASN A 836 SHEET 1 AA3 2 GLY A 216 TRP A 217 0 SHEET 2 AA3 2 ALA A 454 ARG A 455 -1 O ARG A 455 N GLY A 216 SHEET 1 AA4 2 TRP A 465 GLN A 466 0 SHEET 2 AA4 2 TYR A 853 VAL A 854 1 O TYR A 853 N GLN A 466 SHEET 1 AA5 2 PRO A 895 VAL A 898 0 SHEET 2 AA5 2 ALA A 906 GLY A 909 -1 O ALA A 906 N VAL A 898 SHEET 1 AA6 2 TRP A1005 TYR A1007 0 SHEET 2 AA6 2 GLY A1017 LEU A1019 -1 O GLN A1018 N ALA A1006 LINK OD2 ASP A 194 CA CA A1100 1555 1555 2.43 LINK O GLY A 929 CA CA A1100 1555 1555 2.92 LINK O GLY A 931 CA CA A1100 1555 1555 2.59 CRYST1 83.566 83.566 242.335 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011967 0.006909 0.000000 0.00000 SCALE2 0.000000 0.013818 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004127 0.00000