HEADER HYDROLASE 20-AUG-21 7V6D TITLE STRUCTURE OF LIPASE B FROM LASIODIPLODIA THEOBROMAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPASE B; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LASIODIPLODIA THEOBROMAE; SOURCE 3 ORGANISM_TAXID: 45133; SOURCE 4 GENE: LIPB, DBV05_G2145; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: GS115; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: GENOME INTEGRATED LINEARIZED VECTOR; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPIC9K KEYWDS ALPHA/BETA-HYDROLASES, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.XUE,H.F.ZHANG,G.K.T.NGUYEN,W.S.YEW REVDAT 3 29-NOV-23 7V6D 1 REMARK REVDAT 2 16-FEB-22 7V6D 1 JRNL REVDAT 1 13-OCT-21 7V6D 0 JRNL AUTH A.M.J.NG,R.YANG,H.ZHANG,B.XUE,W.S.YEW,G.K.T.NGUYEN JRNL TITL A NOVEL LIPASE FROM LASIODIPLODIA THEOBROMAE EFFICIENTLY JRNL TITL 2 HYDROLYSES C8-C10 METHYL ESTERS FOR THE PREPARATION OF JRNL TITL 3 MEDIUM-CHAIN TRIGLYCERIDES' PRECURSORS. JRNL REF INT J MOL SCI V. 22 2021 JRNL REFN ESSN 1422-0067 JRNL PMID 34638680 JRNL DOI 10.3390/IJMS221910339 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 31217 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7000 - 5.5500 1.00 2871 131 0.1919 0.2300 REMARK 3 2 5.5500 - 4.4100 1.00 2757 137 0.1791 0.2111 REMARK 3 3 4.4100 - 3.8500 1.00 2703 145 0.1588 0.1950 REMARK 3 4 3.8500 - 3.5000 1.00 2731 119 0.1746 0.2275 REMARK 3 5 3.5000 - 3.2500 1.00 2658 141 0.1863 0.2170 REMARK 3 6 3.2500 - 3.0600 1.00 2687 151 0.2047 0.2436 REMARK 3 7 3.0600 - 2.9100 1.00 2656 149 0.2159 0.2885 REMARK 3 8 2.9100 - 2.7800 1.00 2661 140 0.2138 0.2962 REMARK 3 9 2.7800 - 2.6700 1.00 2647 141 0.2346 0.3288 REMARK 3 10 2.6700 - 2.5800 1.00 2643 150 0.2413 0.3756 REMARK 3 11 2.5800 - 2.5000 1.00 2649 150 0.2423 0.2947 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7V6D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1300024175. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95373 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31233 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 29.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.19100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.00 REMARK 200 R MERGE FOR SHELL (I) : 1.20200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6IDY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60% MPD, 100 MM NAOAC, PH 4.6, 10 MM REMARK 280 CACL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.71400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 81.31950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 83.33700 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.71400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 81.31950 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 83.33700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.71400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 81.31950 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 83.33700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.71400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 81.31950 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 83.33700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 90 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 19 REMARK 465 PRO A 20 REMARK 465 ALA A 21 REMARK 465 PRO A 22 REMARK 465 VAL A 23 REMARK 465 PRO A 24 REMARK 465 GLU A 25 REMARK 465 ASN A 26 REMARK 465 GLY A 27 REMARK 465 LEU A 28 REMARK 465 GLU A 29 REMARK 465 LYS A 30 REMARK 465 ARG A 31 REMARK 465 GLN A 32 REMARK 465 SER A 33 REMARK 465 LEU A 34 REMARK 465 SER A 35 REMARK 465 SER A 36 REMARK 465 VAL A 37 REMARK 465 LEU A 38 REMARK 465 SER A 39 REMARK 465 ALA A 40 REMARK 465 LEU A 41 REMARK 465 SER A 42 REMARK 465 GLY A 43 REMARK 465 LEU A 44 REMARK 465 THR A 45 REMARK 465 GLU A 46 REMARK 465 PRO A 47 REMARK 465 THR A 48 REMARK 465 ALA A 49 REMARK 465 ILE A 50 REMARK 465 LEU A 51 REMARK 465 SER A 52 REMARK 465 GLN A 53 REMARK 465 LEU A 54 REMARK 465 GLU A 55 REMARK 465 ALA A 56 REMARK 465 VAL A 57 REMARK 465 GLU A 58 REMARK 465 ALA A 59 REMARK 465 THR A 60 REMARK 465 SER A 61 REMARK 465 THR A 62 REMARK 465 PRO A 63 REMARK 465 THR A 64 REMARK 465 SER A 65 REMARK 465 VAL A 66 REMARK 465 GLU A 67 REMARK 465 GLN A 68 REMARK 465 ALA A 69 REMARK 465 GLN A 70 REMARK 465 GLU A 71 REMARK 465 GLN A 72 REMARK 465 LEU A 73 REMARK 465 GLU A 74 REMARK 465 ALA A 75 REMARK 465 ILE A 76 REMARK 465 TYR A 77 REMARK 465 GLY A 78 REMARK 465 THR A 79 REMARK 465 THR A 80 REMARK 465 PRO A 81 REMARK 465 THR A 82 REMARK 465 ALA B 19 REMARK 465 PRO B 20 REMARK 465 ALA B 21 REMARK 465 PRO B 22 REMARK 465 VAL B 23 REMARK 465 PRO B 24 REMARK 465 GLU B 25 REMARK 465 ASN B 26 REMARK 465 GLY B 27 REMARK 465 LEU B 28 REMARK 465 GLU B 29 REMARK 465 LYS B 30 REMARK 465 ARG B 31 REMARK 465 GLN B 32 REMARK 465 SER B 33 REMARK 465 LEU B 34 REMARK 465 SER B 35 REMARK 465 SER B 36 REMARK 465 VAL B 37 REMARK 465 LEU B 38 REMARK 465 SER B 39 REMARK 465 ALA B 40 REMARK 465 LEU B 41 REMARK 465 SER B 42 REMARK 465 GLY B 43 REMARK 465 LEU B 44 REMARK 465 THR B 45 REMARK 465 GLU B 46 REMARK 465 PRO B 47 REMARK 465 THR B 48 REMARK 465 ALA B 49 REMARK 465 ILE B 50 REMARK 465 LEU B 51 REMARK 465 SER B 52 REMARK 465 GLN B 53 REMARK 465 LEU B 54 REMARK 465 GLU B 55 REMARK 465 ALA B 56 REMARK 465 VAL B 57 REMARK 465 GLU B 58 REMARK 465 ALA B 59 REMARK 465 THR B 60 REMARK 465 SER B 61 REMARK 465 THR B 62 REMARK 465 PRO B 63 REMARK 465 THR B 64 REMARK 465 SER B 65 REMARK 465 VAL B 66 REMARK 465 GLU B 67 REMARK 465 GLN B 68 REMARK 465 ALA B 69 REMARK 465 GLN B 70 REMARK 465 GLU B 71 REMARK 465 GLN B 72 REMARK 465 LEU B 73 REMARK 465 GLU B 74 REMARK 465 ALA B 75 REMARK 465 ILE B 76 REMARK 465 TYR B 77 REMARK 465 GLY B 78 REMARK 465 THR B 79 REMARK 465 THR B 80 REMARK 465 PRO B 81 REMARK 465 THR B 82 REMARK 465 ASN B 83 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 180 -117.05 -134.23 REMARK 500 SER A 235 -128.02 61.99 REMARK 500 TRP A 248 77.93 -112.21 REMARK 500 ASP A 264 75.27 -119.71 REMARK 500 GLN A 332 42.19 -153.30 REMARK 500 ASN B 180 -118.68 -133.49 REMARK 500 SER B 235 -124.81 58.17 REMARK 500 TRP B 248 79.08 -117.44 REMARK 500 PHE B 324 100.87 -164.67 REMARK 500 GLN B 332 45.49 -145.71 REMARK 500 ASP B 343 48.46 -145.54 REMARK 500 CYS B 404 3.85 -68.63 REMARK 500 MET B 445 153.80 -49.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 257 OD1 REMARK 620 2 ASP A 257 OD2 52.1 REMARK 620 3 ALA A 386 O 81.4 77.2 REMARK 620 4 HIS A 389 O 153.1 146.7 86.2 REMARK 620 5 GLY A 391 O 75.4 126.7 106.2 85.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 257 OD1 REMARK 620 2 ASP B 257 OD2 48.2 REMARK 620 3 ALA B 386 O 79.0 66.3 REMARK 620 4 HIS B 389 O 161.0 137.2 87.9 REMARK 620 5 GLY B 391 O 80.2 127.8 101.7 89.2 REMARK 620 N 1 2 3 4 DBREF1 7V6D A 19 449 UNP A0A5N5DNA6_9PEZI DBREF2 7V6D A A0A5N5DNA6 19 449 DBREF1 7V6D B 19 449 UNP A0A5N5DNA6_9PEZI DBREF2 7V6D B A0A5N5DNA6 19 449 SEQRES 1 A 431 ALA PRO ALA PRO VAL PRO GLU ASN GLY LEU GLU LYS ARG SEQRES 2 A 431 GLN SER LEU SER SER VAL LEU SER ALA LEU SER GLY LEU SEQRES 3 A 431 THR GLU PRO THR ALA ILE LEU SER GLN LEU GLU ALA VAL SEQRES 4 A 431 GLU ALA THR SER THR PRO THR SER VAL GLU GLN ALA GLN SEQRES 5 A 431 GLU GLN LEU GLU ALA ILE TYR GLY THR THR PRO THR ASN SEQRES 6 A 431 ILE PHE GLU ASN ILE ALA GLN GLN ILE ALA ASP GLY LEU SEQRES 7 A 431 SER THR LEU THR ILE VAL GLN ALA LEU GLY PHE SER PRO SEQRES 8 A 431 SER GLY GLU ASN SER GLU THR ASN SER ASN THR ARG GLU SEQRES 9 A 431 PRO SER THR THR ILE TYR PRO LYS LYS SER SER SER ASP SEQRES 10 A 431 ALA PRO TYR SER ILE THR GLU GLU GLU LEU ARG GLN ALA SEQRES 11 A 431 ILE TYR ILE PRO SER ASP PHE THR TYR GLY ASP LYS PRO SEQRES 12 A 431 PRO VAL ILE PHE VAL PRO GLY THR GLY SER TYR GLY GLY SEQRES 13 A 431 ILE SER PHE GLY SER ASN LEU ARG LYS LEU LEU THR GLY SEQRES 14 A 431 VAL SER TYR ALA ASP PRO VAL TRP LEU ASN VAL PRO ASP SEQRES 15 A 431 ALA LEU LEU ARG ASP ALA GLN THR ASN GLY GLU PHE VAL SEQRES 16 A 431 ALA TYR ALA ILE ASN TYR ILE SER GLY ILE SER GLY ASP SEQRES 17 A 431 ALA ASN VAL SER VAL VAL SER TRP SER GLN GLY GLY LEU SEQRES 18 A 431 ASP THR GLN TRP ALA PHE THR TYR TRP PRO SER THR ARG SEQRES 19 A 431 ALA LEU VAL SER ASP PHE VAL PRO VAL SER PRO ASP PHE SEQRES 20 A 431 HIS GLY THR VAL LEU ALA ASN VAL ILE CYS LEU ASN PRO SEQRES 21 A 431 GLY ALA GLY GLY VAL GLY LEU GLY PRO CYS ALA PRO ALA SEQRES 22 A 431 VAL LEU GLN GLN GLU TYR ASN SER ASN PHE VAL THR ALA SEQRES 23 A 431 LEU ARG ALA ALA GLY GLY ALA ASP ALA TYR VAL PRO THR SEQRES 24 A 431 THR SER VAL PHE SER GLY PHE LEU ASP GLU ILE VAL GLN SEQRES 25 A 431 PRO GLN SER GLY THR GLY ALA SER ALA TYR ILE ASN ASP SEQRES 26 A 431 ALA ARG GLY VAL GLY THR THR ASN ALA GLU VAL GLN VAL SEQRES 27 A 431 VAL CYS LYS GLY LYS GLY PRO ALA GLY GLY PHE TYR THR SEQRES 28 A 431 HIS GLU SER LEU LEU VAL ASN PRO LEU THR TYR ALA LEU SEQRES 29 A 431 LEU VAL ASP ALA LEU THR HIS ASP GLY PRO GLY SER VAL SEQRES 30 A 431 ASP ARG LEU ASP LEU ASP THR VAL CYS SER THR VAL VAL SEQRES 31 A 431 ALA PRO GLY LEU GLY LEU ASP ALA LEU LEU GLU ILE GLU SEQRES 32 A 431 GLY VAL ASN VAL LEU ALA ALA VAL ASN LEU LEU THR TYR SEQRES 33 A 431 SER ASP ARG ARG LEU ALA GLU PRO ALA LEU MET SER TYR SEQRES 34 A 431 ALA ALA SEQRES 1 B 431 ALA PRO ALA PRO VAL PRO GLU ASN GLY LEU GLU LYS ARG SEQRES 2 B 431 GLN SER LEU SER SER VAL LEU SER ALA LEU SER GLY LEU SEQRES 3 B 431 THR GLU PRO THR ALA ILE LEU SER GLN LEU GLU ALA VAL SEQRES 4 B 431 GLU ALA THR SER THR PRO THR SER VAL GLU GLN ALA GLN SEQRES 5 B 431 GLU GLN LEU GLU ALA ILE TYR GLY THR THR PRO THR ASN SEQRES 6 B 431 ILE PHE GLU ASN ILE ALA GLN GLN ILE ALA ASP GLY LEU SEQRES 7 B 431 SER THR LEU THR ILE VAL GLN ALA LEU GLY PHE SER PRO SEQRES 8 B 431 SER GLY GLU ASN SER GLU THR ASN SER ASN THR ARG GLU SEQRES 9 B 431 PRO SER THR THR ILE TYR PRO LYS LYS SER SER SER ASP SEQRES 10 B 431 ALA PRO TYR SER ILE THR GLU GLU GLU LEU ARG GLN ALA SEQRES 11 B 431 ILE TYR ILE PRO SER ASP PHE THR TYR GLY ASP LYS PRO SEQRES 12 B 431 PRO VAL ILE PHE VAL PRO GLY THR GLY SER TYR GLY GLY SEQRES 13 B 431 ILE SER PHE GLY SER ASN LEU ARG LYS LEU LEU THR GLY SEQRES 14 B 431 VAL SER TYR ALA ASP PRO VAL TRP LEU ASN VAL PRO ASP SEQRES 15 B 431 ALA LEU LEU ARG ASP ALA GLN THR ASN GLY GLU PHE VAL SEQRES 16 B 431 ALA TYR ALA ILE ASN TYR ILE SER GLY ILE SER GLY ASP SEQRES 17 B 431 ALA ASN VAL SER VAL VAL SER TRP SER GLN GLY GLY LEU SEQRES 18 B 431 ASP THR GLN TRP ALA PHE THR TYR TRP PRO SER THR ARG SEQRES 19 B 431 ALA LEU VAL SER ASP PHE VAL PRO VAL SER PRO ASP PHE SEQRES 20 B 431 HIS GLY THR VAL LEU ALA ASN VAL ILE CYS LEU ASN PRO SEQRES 21 B 431 GLY ALA GLY GLY VAL GLY LEU GLY PRO CYS ALA PRO ALA SEQRES 22 B 431 VAL LEU GLN GLN GLU TYR ASN SER ASN PHE VAL THR ALA SEQRES 23 B 431 LEU ARG ALA ALA GLY GLY ALA ASP ALA TYR VAL PRO THR SEQRES 24 B 431 THR SER VAL PHE SER GLY PHE LEU ASP GLU ILE VAL GLN SEQRES 25 B 431 PRO GLN SER GLY THR GLY ALA SER ALA TYR ILE ASN ASP SEQRES 26 B 431 ALA ARG GLY VAL GLY THR THR ASN ALA GLU VAL GLN VAL SEQRES 27 B 431 VAL CYS LYS GLY LYS GLY PRO ALA GLY GLY PHE TYR THR SEQRES 28 B 431 HIS GLU SER LEU LEU VAL ASN PRO LEU THR TYR ALA LEU SEQRES 29 B 431 LEU VAL ASP ALA LEU THR HIS ASP GLY PRO GLY SER VAL SEQRES 30 B 431 ASP ARG LEU ASP LEU ASP THR VAL CYS SER THR VAL VAL SEQRES 31 B 431 ALA PRO GLY LEU GLY LEU ASP ALA LEU LEU GLU ILE GLU SEQRES 32 B 431 GLY VAL ASN VAL LEU ALA ALA VAL ASN LEU LEU THR TYR SEQRES 33 B 431 SER ASP ARG ARG LEU ALA GLU PRO ALA LEU MET SER TYR SEQRES 34 B 431 ALA ALA HET NAG C 1 14 HET NAG C 2 14 HET CA A 501 1 HET CA B 501 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 CA 2(CA 2+) FORMUL 6 HOH *118(H2 O) HELIX 1 AA1 ASN A 83 SER A 97 1 15 HELIX 2 AA2 LEU A 99 LEU A 105 1 7 HELIX 3 AA3 SER A 110 SER A 114 5 5 HELIX 4 AA4 THR A 141 ALA A 148 1 8 HELIX 5 AA5 TYR A 172 GLY A 178 1 7 HELIX 6 AA6 ASN A 180 LEU A 185 1 6 HELIX 7 AA7 ASP A 205 ILE A 223 1 19 HELIX 8 AA8 SER A 235 TRP A 248 1 14 HELIX 9 AA9 PRO A 249 ALA A 253 5 5 HELIX 10 AB1 THR A 268 CYS A 275 1 8 HELIX 11 AB2 ALA A 289 GLN A 295 1 7 HELIX 12 AB3 SER A 299 ALA A 308 1 10 HELIX 13 AB4 SER A 333 ALA A 337 5 5 HELIX 14 AB5 VAL A 354 CYS A 358 1 5 HELIX 15 AB6 GLY A 362 GLY A 366 5 5 HELIX 16 AB7 GLU A 371 VAL A 375 5 5 HELIX 17 AB8 ASN A 376 THR A 388 1 13 HELIX 18 AB9 ASP A 399 CYS A 404 1 6 HELIX 19 AC1 GLY A 413 TYR A 434 1 22 HELIX 20 AC2 PHE B 85 SER B 97 1 13 HELIX 21 AC3 LEU B 99 LEU B 105 1 7 HELIX 22 AC4 SER B 110 SER B 114 5 5 HELIX 23 AC5 THR B 141 ALA B 148 1 8 HELIX 24 AC6 TYR B 172 GLY B 178 1 7 HELIX 25 AC7 ASN B 180 LEU B 185 1 6 HELIX 26 AC8 VAL B 198 LEU B 203 5 6 HELIX 27 AC9 ASP B 205 ILE B 223 1 19 HELIX 28 AD1 SER B 235 TRP B 248 1 14 HELIX 29 AD2 PRO B 249 ALA B 253 5 5 HELIX 30 AD3 THR B 268 CYS B 275 1 8 HELIX 31 AD4 ALA B 289 GLN B 295 1 7 HELIX 32 AD5 SER B 299 ALA B 308 1 10 HELIX 33 AD6 VAL B 354 CYS B 358 1 5 HELIX 34 AD7 GLY B 362 GLY B 366 5 5 HELIX 35 AD8 GLU B 371 VAL B 375 5 5 HELIX 36 AD9 ASN B 376 THR B 388 1 13 HELIX 37 AE1 ASP B 399 CYS B 404 1 6 HELIX 38 AE2 LEU B 414 TYR B 434 1 21 HELIX 39 AE3 MET B 445 ALA B 449 5 5 SHEET 1 AA1 5 ILE A 149 TYR A 150 0 SHEET 2 AA1 5 ASP A 192 LEU A 196 -1 O TRP A 195 N TYR A 150 SHEET 3 AA1 5 PRO A 162 VAL A 166 1 N PHE A 165 O VAL A 194 SHEET 4 AA1 5 VAL A 229 TRP A 234 1 O SER A 230 N ILE A 164 SHEET 5 AA1 5 VAL A 255 VAL A 261 1 O VAL A 261 N SER A 233 SHEET 1 AA2 2 THR A 317 PHE A 321 0 SHEET 2 AA2 2 THR A 349 GLU A 353 1 O ALA A 352 N SER A 319 SHEET 1 AA3 5 ILE B 149 TYR B 150 0 SHEET 2 AA3 5 ASP B 192 LEU B 196 -1 O TRP B 195 N TYR B 150 SHEET 3 AA3 5 PRO B 162 VAL B 166 1 N VAL B 163 O VAL B 194 SHEET 4 AA3 5 VAL B 229 TRP B 234 1 O SER B 230 N ILE B 164 SHEET 5 AA3 5 VAL B 255 VAL B 261 1 O VAL B 261 N SER B 233 SHEET 1 AA4 2 THR B 317 PHE B 321 0 SHEET 2 AA4 2 THR B 349 GLU B 353 1 O ALA B 352 N SER B 319 SSBOND 1 CYS A 275 CYS A 288 1555 1555 2.04 SSBOND 2 CYS A 358 CYS A 404 1555 1555 2.04 SSBOND 3 CYS B 275 CYS B 288 1555 1555 2.03 SSBOND 4 CYS B 358 CYS B 404 1555 1555 2.03 LINK ND2 ASN A 228 C1 NAG C 1 1555 1555 1.46 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK OD1 ASP A 257 CA CA A 501 1555 1555 2.60 LINK OD2 ASP A 257 CA CA A 501 1555 1555 2.43 LINK O ALA A 386 CA CA A 501 1555 1555 2.30 LINK O HIS A 389 CA CA A 501 1555 1555 2.33 LINK O GLY A 391 CA CA A 501 1555 1555 2.35 LINK OD1 ASP B 257 CA CA B 501 1555 1555 2.45 LINK OD2 ASP B 257 CA CA B 501 1555 1555 2.88 LINK O ALA B 386 CA CA B 501 1555 1555 2.28 LINK O HIS B 389 CA CA B 501 1555 1555 2.31 LINK O GLY B 391 CA CA B 501 1555 1555 2.41 CISPEP 1 TYR A 128 PRO A 129 0 6.19 CISPEP 2 PHE A 324 LEU A 325 0 -26.94 CISPEP 3 GLN A 330 PRO A 331 0 -2.49 CISPEP 4 TYR B 128 PRO B 129 0 7.33 CISPEP 5 PHE B 324 LEU B 325 0 0.18 CISPEP 6 GLN B 330 PRO B 331 0 -5.82 CRYST1 65.428 162.639 166.674 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015284 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006149 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006000 0.00000