HEADER LYASE 20-AUG-21 7V6F TITLE STRUCTURE OF CANDIDA ALBICANS FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE TITLE 2 COMPLEXED WITH G3P COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRUCTOSE-BISPHOSPHATE ALDOLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FBPA,37 KDA MAJOR ALLERGEN,FRUCTOSE-1,6-BISPHOSPHATE COMPND 5 ALDOLASE,IGE-BINDING ALLERGEN; COMPND 6 EC: 4.1.2.13; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS SC5314; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 237561; SOURCE 5 STRAIN: SC5314; SOURCE 6 GENE: FBA1, CAALFM_C401750CA, CAO19.12088, CAO19.4618; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FBA, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR C.HONGXUAN,Y.HUANG,C.HAN,W.CHEN,Y.REN,J.WAN REVDAT 2 29-NOV-23 7V6F 1 REMARK REVDAT 1 23-FEB-22 7V6F 0 JRNL AUTH W.WEN,H.CAO,Y.HUANG,J.TU,C.WAN,J.WAN,X.HAN,H.CHEN,J.LIU, JRNL AUTH 2 L.RAO,C.SU,C.PENG,C.SHENG,Y.REN JRNL TITL STRUCTURE-GUIDED DISCOVERY OF THE NOVEL COVALENT ALLOSTERIC JRNL TITL 2 SITE AND COVALENT INHIBITORS OF FRUCTOSE-1,6-BISPHOSPHATE JRNL TITL 3 ALDOLASE TO OVERCOME THE AZOLE RESISTANCE OF CANDIDIASIS. JRNL REF J.MED.CHEM. V. 65 2656 2022 JRNL REFN ISSN 0022-2623 JRNL DOI 10.1021/ACS.JMEDCHEM.1C02102 REMARK 2 REMARK 2 RESOLUTION. 2.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 15822 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 833 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1113 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.3940 REMARK 3 BIN FREE R VALUE SET COUNT : 58 REMARK 3 BIN FREE R VALUE : 0.4190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5142 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 11.18000 REMARK 3 B22 (A**2) : -0.28000 REMARK 3 B33 (A**2) : -4.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -6.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.487 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.472 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.549 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5273 ; 0.006 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7141 ; 1.490 ; 1.634 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 666 ; 6.927 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 242 ;35.271 ;23.884 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 863 ;20.704 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;18.182 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 700 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3998 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7V6F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1300023993. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JAN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18393 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.885 REMARK 200 RESOLUTION RANGE LOW (A) : 43.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.99 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6LNK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH =7.5, 11% (W/V) PEG REMARK 280 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 59.72900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.28500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 59.72900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.28500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 GLU A 180 REMARK 465 GLU A 181 REMARK 465 ASP A 182 REMARK 465 GLY A 183 REMARK 465 VAL A 184 REMARK 465 ASN A 185 REMARK 465 ASN A 186 REMARK 465 GLU A 187 REMARK 465 HIS A 188 REMARK 465 VAL A 189 REMARK 465 GLU A 190 REMARK 465 LYS A 191 REMARK 465 ASP A 192 REMARK 465 ALA A 193 REMARK 465 GLY A 226 REMARK 465 VAL A 227 REMARK 465 TYR A 228 REMARK 465 LYS A 229 REMARK 465 PRO A 230 REMARK 465 GLY A 231 REMARK 465 ASN A 232 REMARK 465 VAL A 233 REMARK 465 HIS A 359 REMARK 465 HIS A 360 REMARK 465 HIS A 361 REMARK 465 HIS A 362 REMARK 465 HIS A 363 REMARK 465 HIS A 364 REMARK 465 MET B 0 REMARK 465 ALA B 1 REMARK 465 GLU B 180 REMARK 465 GLU B 181 REMARK 465 ASP B 182 REMARK 465 GLY B 183 REMARK 465 VAL B 184 REMARK 465 ASN B 185 REMARK 465 ASN B 186 REMARK 465 GLU B 187 REMARK 465 HIS B 188 REMARK 465 VAL B 189 REMARK 465 GLU B 190 REMARK 465 LYS B 191 REMARK 465 ASP B 192 REMARK 465 ALA B 193 REMARK 465 GLY B 226 REMARK 465 VAL B 227 REMARK 465 TYR B 228 REMARK 465 LYS B 229 REMARK 465 PRO B 230 REMARK 465 GLY B 231 REMARK 465 HIS B 359 REMARK 465 HIS B 360 REMARK 465 HIS B 361 REMARK 465 HIS B 362 REMARK 465 HIS B 363 REMARK 465 HIS B 364 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 248 CB CG CD CE NZ REMARK 470 TYR A 309 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 310 CG CD1 CD2 REMARK 470 LYS A 311 CB CG CD CE NZ REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 LYS A 325 CE NZ REMARK 470 TYR B 309 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 311 CG CD CE NZ REMARK 470 ASN B 316 CB CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 313 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 PRO A 317 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 LYS B 311 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 PRO B 313 C - N - CA ANGL. DEV. = 11.8 DEGREES REMARK 500 PRO B 313 C - N - CD ANGL. DEV. = -18.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 108 -165.89 -73.61 REMARK 500 HIS A 109 118.16 -34.00 REMARK 500 PHE A 221 44.41 -145.86 REMARK 500 SER A 267 100.83 -46.38 REMARK 500 ASP A 288 -74.46 -138.52 REMARK 500 TYR A 302 35.15 -85.53 REMARK 500 TYR A 309 29.14 -164.08 REMARK 500 LYS A 311 -77.55 -121.96 REMARK 500 ALA A 312 -39.78 152.44 REMARK 500 VAL A 314 91.67 -55.52 REMARK 500 PRO A 317 15.69 -49.30 REMARK 500 GLU A 318 145.13 -175.91 REMARK 500 ALA A 320 25.17 -158.35 REMARK 500 PRO B 3 -167.85 -74.54 REMARK 500 GLN B 78 11.44 85.67 REMARK 500 HIS B 109 112.60 -25.58 REMARK 500 GLU B 147 -156.44 -99.94 REMARK 500 THR B 177 -87.04 -127.25 REMARK 500 PHE B 221 35.65 -153.70 REMARK 500 ASP B 288 -65.88 -146.80 REMARK 500 LYS B 311 -52.32 -21.38 REMARK 500 ALA B 320 14.21 -152.14 REMARK 500 VAL B 332 -51.30 -120.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 109 NE2 REMARK 620 2 GLU A 173 OE1 134.6 REMARK 620 3 GLU A 173 OE2 85.8 59.2 REMARK 620 4 HIS A 225 NE2 95.2 123.5 172.2 REMARK 620 5 HIS A 264 ND1 90.7 108.9 80.5 91.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 109 NE2 REMARK 620 2 GLU B 173 OE1 142.4 REMARK 620 3 GLU B 173 OE2 124.7 57.4 REMARK 620 4 HIS B 225 NE2 125.0 92.5 76.9 REMARK 620 5 HIS B 264 ND1 94.0 67.9 124.7 114.3 REMARK 620 N 1 2 3 4 DBREF 7V6F A 0 358 UNP Q9URB4 ALF_CANAL 1 359 DBREF 7V6F B 0 358 UNP Q9URB4 ALF_CANAL 1 359 SEQADV 7V6F HIS A 359 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS A 360 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS A 361 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS A 362 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS A 363 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS A 364 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS B 359 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS B 360 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS B 361 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS B 362 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS B 363 UNP Q9URB4 EXPRESSION TAG SEQADV 7V6F HIS B 364 UNP Q9URB4 EXPRESSION TAG SEQRES 1 A 365 MET ALA PRO PRO ALA VAL LEU SER LYS SER GLY VAL ILE SEQRES 2 A 365 TYR GLY LYS ASP VAL LYS ASP LEU PHE ASP TYR ALA GLN SEQRES 3 A 365 GLU LYS GLY PHE ALA ILE PRO ALA ILE ASN VAL THR SER SEQRES 4 A 365 SER SER THR VAL VAL ALA ALA LEU GLU ALA ALA ARG ASP SEQRES 5 A 365 ASN LYS ALA PRO ILE ILE LEU GLN THR SER GLN GLY GLY SEQRES 6 A 365 ALA ALA TYR PHE ALA GLY LYS GLY VAL ASP ASN LYS ASP SEQRES 7 A 365 GLN ALA ALA SER ILE ALA GLY SER ILE ALA ALA ALA HIS SEQRES 8 A 365 TYR ILE ARG ALA ILE ALA PRO THR TYR GLY ILE PRO VAL SEQRES 9 A 365 VAL LEU HIS THR ASP HIS CYS ALA LYS LYS LEU LEU PRO SEQRES 10 A 365 TRP PHE ASP GLY MET LEU LYS ALA ASP GLU GLU PHE PHE SEQRES 11 A 365 ALA LYS THR GLY THR PRO LEU PHE SER SER HIS MET LEU SEQRES 12 A 365 ASP LEU SER GLU GLU THR ASP ASP GLU ASN ILE ALA THR SEQRES 13 A 365 CYS ALA LYS TYR PHE GLU ARG MET ALA LYS MET GLY GLN SEQRES 14 A 365 TRP LEU GLU MET GLU ILE GLY ILE THR GLY GLY GLU GLU SEQRES 15 A 365 ASP GLY VAL ASN ASN GLU HIS VAL GLU LYS ASP ALA LEU SEQRES 16 A 365 TYR THR SER PRO GLU THR VAL PHE ALA VAL TYR GLU SER SEQRES 17 A 365 LEU HIS LYS ILE SER PRO ASN PHE SER ILE ALA ALA ALA SEQRES 18 A 365 PHE GLY ASN VAL HIS GLY VAL TYR LYS PRO GLY ASN VAL SEQRES 19 A 365 GLN LEU ARG PRO GLU ILE LEU GLY ASP HIS GLN VAL TYR SEQRES 20 A 365 ALA LYS LYS GLN ILE GLY THR ASP ALA LYS HIS PRO LEU SEQRES 21 A 365 TYR LEU VAL PHE HIS GLY GLY SER GLY SER THR GLN GLU SEQRES 22 A 365 GLU PHE ASN THR ALA ILE LYS ASN GLY VAL VAL LYS VAL SEQRES 23 A 365 ASN LEU ASP THR ASP CYS GLN TYR ALA TYR LEU THR GLY SEQRES 24 A 365 ILE ARG ASP TYR VAL THR ASN LYS ILE GLU TYR LEU LYS SEQRES 25 A 365 ALA PRO VAL GLY ASN PRO GLU GLY ALA ASP LYS PRO ASN SEQRES 26 A 365 LYS LYS TYR PHE ASP PRO ARG VAL TRP VAL ARG GLU GLY SEQRES 27 A 365 GLU LYS THR MET SER LYS ARG ILE ALA GLU ALA LEU ASP SEQRES 28 A 365 ILE PHE HIS THR LYS GLY GLN LEU HIS HIS HIS HIS HIS SEQRES 29 A 365 HIS SEQRES 1 B 365 MET ALA PRO PRO ALA VAL LEU SER LYS SER GLY VAL ILE SEQRES 2 B 365 TYR GLY LYS ASP VAL LYS ASP LEU PHE ASP TYR ALA GLN SEQRES 3 B 365 GLU LYS GLY PHE ALA ILE PRO ALA ILE ASN VAL THR SER SEQRES 4 B 365 SER SER THR VAL VAL ALA ALA LEU GLU ALA ALA ARG ASP SEQRES 5 B 365 ASN LYS ALA PRO ILE ILE LEU GLN THR SER GLN GLY GLY SEQRES 6 B 365 ALA ALA TYR PHE ALA GLY LYS GLY VAL ASP ASN LYS ASP SEQRES 7 B 365 GLN ALA ALA SER ILE ALA GLY SER ILE ALA ALA ALA HIS SEQRES 8 B 365 TYR ILE ARG ALA ILE ALA PRO THR TYR GLY ILE PRO VAL SEQRES 9 B 365 VAL LEU HIS THR ASP HIS CYS ALA LYS LYS LEU LEU PRO SEQRES 10 B 365 TRP PHE ASP GLY MET LEU LYS ALA ASP GLU GLU PHE PHE SEQRES 11 B 365 ALA LYS THR GLY THR PRO LEU PHE SER SER HIS MET LEU SEQRES 12 B 365 ASP LEU SER GLU GLU THR ASP ASP GLU ASN ILE ALA THR SEQRES 13 B 365 CYS ALA LYS TYR PHE GLU ARG MET ALA LYS MET GLY GLN SEQRES 14 B 365 TRP LEU GLU MET GLU ILE GLY ILE THR GLY GLY GLU GLU SEQRES 15 B 365 ASP GLY VAL ASN ASN GLU HIS VAL GLU LYS ASP ALA LEU SEQRES 16 B 365 TYR THR SER PRO GLU THR VAL PHE ALA VAL TYR GLU SER SEQRES 17 B 365 LEU HIS LYS ILE SER PRO ASN PHE SER ILE ALA ALA ALA SEQRES 18 B 365 PHE GLY ASN VAL HIS GLY VAL TYR LYS PRO GLY ASN VAL SEQRES 19 B 365 GLN LEU ARG PRO GLU ILE LEU GLY ASP HIS GLN VAL TYR SEQRES 20 B 365 ALA LYS LYS GLN ILE GLY THR ASP ALA LYS HIS PRO LEU SEQRES 21 B 365 TYR LEU VAL PHE HIS GLY GLY SER GLY SER THR GLN GLU SEQRES 22 B 365 GLU PHE ASN THR ALA ILE LYS ASN GLY VAL VAL LYS VAL SEQRES 23 B 365 ASN LEU ASP THR ASP CYS GLN TYR ALA TYR LEU THR GLY SEQRES 24 B 365 ILE ARG ASP TYR VAL THR ASN LYS ILE GLU TYR LEU LYS SEQRES 25 B 365 ALA PRO VAL GLY ASN PRO GLU GLY ALA ASP LYS PRO ASN SEQRES 26 B 365 LYS LYS TYR PHE ASP PRO ARG VAL TRP VAL ARG GLU GLY SEQRES 27 B 365 GLU LYS THR MET SER LYS ARG ILE ALA GLU ALA LEU ASP SEQRES 28 B 365 ILE PHE HIS THR LYS GLY GLN LEU HIS HIS HIS HIS HIS SEQRES 29 B 365 HIS HET ZN A 601 1 HET G3H A 602 10 HET ZN B 501 1 HETNAM ZN ZINC ION HETNAM G3H GLYCERALDEHYDE-3-PHOSPHATE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 G3H C3 H7 O6 P FORMUL 6 HOH *15(H2 O) HELIX 1 AA1 PRO A 3 LYS A 8 5 6 HELIX 2 AA2 GLY A 14 GLY A 28 1 15 HELIX 3 AA3 SER A 38 ASN A 52 1 15 HELIX 4 AA4 SER A 61 PHE A 68 1 8 HELIX 5 AA5 GLN A 78 ALA A 96 1 19 HELIX 6 AA6 PRO A 97 GLY A 100 5 4 HELIX 7 AA7 ALA A 111 LYS A 113 5 3 HELIX 8 AA8 LEU A 114 GLY A 133 1 20 HELIX 9 AA9 THR A 148 LYS A 165 1 18 HELIX 10 AB1 SER A 197 HIS A 209 1 13 HELIX 11 AB2 GLU A 238 GLN A 250 1 13 HELIX 12 AB3 THR A 270 ASN A 280 1 11 HELIX 13 AB4 ASP A 288 ASP A 301 1 14 HELIX 14 AB5 ASN A 305 TYR A 309 5 5 HELIX 15 AB6 ASN A 324 ASP A 329 1 6 HELIX 16 AB7 ASP A 329 PHE A 352 1 24 HELIX 17 AB8 ALA B 4 LYS B 8 5 5 HELIX 18 AB9 TYR B 13 GLY B 28 1 16 HELIX 19 AC1 SER B 38 ASN B 52 1 15 HELIX 20 AC2 SER B 61 GLY B 70 1 10 HELIX 21 AC3 GLN B 78 ALA B 96 1 19 HELIX 22 AC4 PRO B 97 TYR B 99 5 3 HELIX 23 AC5 ALA B 111 LYS B 113 5 3 HELIX 24 AC6 LEU B 114 GLY B 133 1 20 HELIX 25 AC7 THR B 148 ALA B 164 1 17 HELIX 26 AC8 LYS B 165 GLY B 167 5 3 HELIX 27 AC9 SER B 197 HIS B 209 1 13 HELIX 28 AD1 PRO B 237 GLY B 252 1 16 HELIX 29 AD2 THR B 270 ASN B 280 1 11 HELIX 30 AD3 ASP B 288 ASP B 301 1 14 HELIX 31 AD4 TYR B 302 LEU B 310 5 9 HELIX 32 AD5 VAL B 314 GLY B 319 1 6 HELIX 33 AD6 ASN B 324 ASP B 329 1 6 HELIX 34 AD7 ASP B 329 PHE B 352 1 24 SHEET 1 AA1 9 GLY A 10 VAL A 11 0 SHEET 2 AA1 9 PRO A 102 THR A 107 1 O VAL A 103 N GLY A 10 SHEET 3 AA1 9 ILE A 56 THR A 60 1 N LEU A 58 O HIS A 106 SHEET 4 AA1 9 ILE A 31 ASN A 35 1 N ILE A 34 O GLN A 59 SHEET 5 AA1 9 VAL A 282 LEU A 287 1 O LEU A 287 N ALA A 33 SHEET 6 AA1 9 LEU A 261 PHE A 263 1 N LEU A 261 O VAL A 283 SHEET 7 AA1 9 PHE A 215 ALA A 218 1 N ILE A 217 O VAL A 262 SHEET 8 AA1 9 TRP A 169 GLU A 173 1 N MET A 172 O ALA A 218 SHEET 9 AA1 9 SER A 139 ASP A 143 1 N HIS A 140 O GLU A 171 SHEET 1 AA2 6 GLY B 10 VAL B 11 0 SHEET 2 AA2 6 PRO B 102 THR B 107 1 O VAL B 103 N GLY B 10 SHEET 3 AA2 6 ILE B 56 THR B 60 1 N LEU B 58 O VAL B 104 SHEET 4 AA2 6 ILE B 31 ASN B 35 1 N ILE B 34 O GLN B 59 SHEET 5 AA2 6 VAL B 282 LEU B 287 1 O LEU B 287 N ALA B 33 SHEET 6 AA2 6 LEU B 261 PHE B 263 1 N LEU B 261 O VAL B 283 SHEET 1 AA3 3 SER B 139 ASP B 143 0 SHEET 2 AA3 3 TRP B 169 ILE B 174 1 O GLU B 171 N HIS B 140 SHEET 3 AA3 3 PHE B 215 ALA B 219 1 O ALA B 218 N ILE B 174 LINK NE2 HIS A 109 ZN ZN A 601 1555 1555 2.06 LINK OE1 GLU A 173 ZN ZN A 601 1555 1555 2.19 LINK OE2 GLU A 173 ZN ZN A 601 1555 1555 2.20 LINK NE2 HIS A 225 ZN ZN A 601 1555 1555 2.30 LINK ND1 HIS A 264 ZN ZN A 601 1555 1555 2.43 LINK NE2 HIS B 109 ZN ZN B 501 1555 1555 1.78 LINK OE1 GLU B 173 ZN ZN B 501 1555 1555 2.22 LINK OE2 GLU B 173 ZN ZN B 501 1555 1555 2.19 LINK NE2 HIS B 225 ZN ZN B 501 1555 1555 2.12 LINK ND1 HIS B 264 ZN ZN B 501 1555 1555 2.42 CRYST1 119.458 56.570 131.747 90.00 113.43 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008371 0.000000 0.003628 0.00000 SCALE2 0.000000 0.017677 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008273 0.00000