HEADER TRANSFERASE 30-AUG-21 7VB8 TITLE SBSOMT IN COMPLEX WITH RESVERATROL AND NICOTINAMIDE ADENINE TITLE 2 DINUCLEOTIDE(NAD+) COMPND MOL_ID: 1; COMPND 2 MOLECULE: STILBENE O-METHYLTRANSFERASE; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SORGHUM BICOLOR; SOURCE 3 ORGANISM_COMMON: SORGHUM; SOURCE 4 ORGANISM_TAXID: 4558; SOURCE 5 GENE: SORBI_3007G059100; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 CODONPLUS (DE3) RIL KEYWDS RESVERATROL, COMPLEX, O-METHYLTRANSFERASE, SUBSTRATE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.C.POW,Q.HAO REVDAT 4 03-APR-24 7VB8 1 REMARK REVDAT 3 21-JUN-23 7VB8 1 JRNL REVDAT 2 25-JAN-23 7VB8 1 TITLE JRNL REVDAT 1 07-SEP-22 7VB8 0 JRNL AUTH A.C.W.LUI,K.C.POW,N.LIN,L.P.Y.LAM,G.LIU,I.D.GODWIN,Z.FAN, JRNL AUTH 2 C.J.KHOO,Y.TOBIMATSU,L.WANG,Q.HAO,C.LO JRNL TITL REGIOSELECTIVE STILBENE O-METHYLATIONS IN SACCHARINAE JRNL TITL 2 GRASSES. JRNL REF NAT COMMUN V. 14 3462 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37308495 JRNL DOI 10.1038/S41467-023-38908-5 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 97159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.042 REMARK 3 FREE R VALUE TEST SET COUNT : 4899 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6616 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 339 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5622 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 229 REMARK 3 SOLVENT ATOMS : 568 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.73500 REMARK 3 B22 (A**2) : -0.73500 REMARK 3 B33 (A**2) : 2.38300 REMARK 3 B12 (A**2) : -0.36700 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.091 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.089 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.993 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6196 ; 0.010 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 5693 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8405 ; 1.639 ; 1.642 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13241 ; 0.558 ; 1.550 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 772 ; 6.362 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 36 ;16.817 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1026 ;14.638 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 945 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7048 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1246 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1232 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 102 ; 0.217 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2965 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 423 ; 0.176 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3028 ; 2.816 ; 2.604 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3027 ; 2.816 ; 2.603 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3818 ; 3.930 ; 3.884 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3819 ; 3.929 ; 3.884 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3168 ; 4.125 ; 3.129 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3169 ; 4.125 ; 3.130 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4587 ; 6.057 ; 4.507 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4588 ; 6.057 ; 4.508 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7VB8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1300023627. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97225 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 48.462 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 19.40 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 14.60 REMARK 200 R MERGE FOR SHELL (I) : 0.94100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, BUCCANEER REMARK 200 STARTING MODEL: MRBUMP GENERATED CHIMERIC MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE PH 4.6, 0.2 M REMARK 280 SODIUM ACETATE , 0.2 M AMMONIUM CHLORIDE, 2.5% (W/V) REMARK 280 POLYETHYLENE GLYCOL 4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.01267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 112.02533 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 112.02533 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 56.01267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 TYR B 4 REMARK 465 ASP B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 SER B 10 REMARK 465 SER B 11 REMARK 465 ASN B 12 REMARK 465 ASP B 13 REMARK 465 SER B 14 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 TYR A 4 REMARK 465 ASP A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 SER A 11 REMARK 465 ASN A 12 REMARK 465 ASP A 13 REMARK 465 SER A 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 177 O HOH B 501 2.03 REMARK 500 O LEU B 300 NZ LYS B 377 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE B 280 -60.31 -98.16 REMARK 500 ILE B 366 -76.67 -104.97 REMARK 500 PHE B 367 146.94 -171.22 REMARK 500 ASN B 369 -4.23 74.47 REMARK 500 ILE A 280 -60.61 -97.10 REMARK 500 ARG A 303 -3.21 76.03 REMARK 500 ILE A 366 -76.16 -102.93 REMARK 500 PHE A 367 142.76 -175.19 REMARK 500 ASN A 369 -2.87 76.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS B 114 CYS B 115 -148.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 75 0.09 SIDE CHAIN REMARK 500 ARG B 97 0.10 SIDE CHAIN REMARK 500 ARG B 130 0.13 SIDE CHAIN REMARK 500 ARG B 271 0.13 SIDE CHAIN REMARK 500 ARG B 303 0.11 SIDE CHAIN REMARK 500 ARG A 75 0.14 SIDE CHAIN REMARK 500 ARG A 116 0.20 SIDE CHAIN REMARK 500 ARG A 130 0.11 SIDE CHAIN REMARK 500 ARG A 209 0.08 SIDE CHAIN REMARK 500 ARG A 271 0.17 SIDE CHAIN REMARK 500 ARG A 303 0.13 SIDE CHAIN REMARK 500 ARG A 346 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7WAQ RELATED DB: PDB REMARK 900 RELATED ID: 7WAR RELATED DB: PDB REMARK 900 RELATED ID: 7WAS RELATED DB: PDB DBREF1 7VB8 B 1 377 UNP A0A1B6PFV1_SORBI DBREF2 7VB8 B A0A1B6PFV1 1 377 DBREF1 7VB8 A 1 377 UNP A0A1B6PFV1_SORBI DBREF2 7VB8 A A0A1B6PFV1 1 377 SEQRES 1 B 377 MET GLY SER TYR ASP SER SER SER SER SER SER ASN ASP SEQRES 2 B 377 SER SER ALA ARG ASN GLU GLU ASP GLU SER CYS MET PHE SEQRES 3 B 377 ALA LEU LYS LEU LEU GLY GLY PHE ALA VAL PRO PHE THR SEQRES 4 B 377 ILE LYS ALA VAL ILE GLU LEU GLY VAL MET ASP GLN LEU SEQRES 5 B 377 LEU THR ALA GLU ARG ALA MET SER ALA GLU GLU LEU VAL SEQRES 6 B 377 ALA ALA ALA VAL ALA ALA GLN LEU PRO ARG PRO GLU VAL SEQRES 7 B 377 ALA CYS THR MET VAL ASP ARG LEU LEU ARG PHE LEU ALA SEQRES 8 B 377 SER HIS SER VAL VAL ARG CYS THR THR GLU VAL VAL VAL SEQRES 9 B 377 GLY THR ASP ASP ALA THR THR THR THR CYS CYS ARG ARG SEQRES 10 B 377 SER TYR ALA ALA SER PRO VAL CYS LYS TRP PHE ALA ARG SEQRES 11 B 377 ASN GLY VAL GLU ASP SER VAL LEU PRO LEU GLY MET MET SEQRES 12 B 377 ILE LEU ASN LYS THR PHE LEU ASP SER TRP GLN ASN ILE SEQRES 13 B 377 THR ASP ALA VAL LEU GLU GLY ALA ALA PRO PHE GLU LYS SEQRES 14 B 377 THR TYR GLY MET PRO MET PHE GLU TYR LEU SER THR ASN SEQRES 15 B 377 GLY PRO LEU ASN THR VAL PHE HIS GLU ALA MET ALA ASN SEQRES 16 B 377 HIS SER MET ILE ILE THR LYS LYS LEU LEU LYS PHE PHE SEQRES 17 B 377 ARG GLY PHE GLU GLY LEU ASP VAL LEU VAL ASP VAL GLY SEQRES 18 B 377 GLY GLY ASN GLY THR THR LEU GLN MET ILE ARG GLY GLN SEQRES 19 B 377 TYR LYS ASN MET ARG GLY ILE ASN TYR ASP LEU PRO HIS SEQRES 20 B 377 VAL ILE ALA GLN ALA ALA PRO VAL GLU GLY VAL GLU HIS SEQRES 21 B 377 VAL GLY GLY SER MET PHE ASP ASN ILE PRO ARG GLY ASN SEQRES 22 B 377 ALA VAL LEU LEU LYS TRP ILE LEU HIS ASP TRP ASP ASP SEQRES 23 B 377 LYS ALA CYS ILE LYS ILE LEU LYS ASN CYS TYR THR ALA SEQRES 24 B 377 LEU HIS VAL ARG GLY LYS VAL ILE VAL LEU GLU TYR VAL SEQRES 25 B 377 VAL PRO ASP GLU PRO GLU PRO THR LEU ALA ALA GLN GLY SEQRES 26 B 377 ALA PHE GLU LEU ASP LEU THR MET LEU VAL THR PHE GLY SEQRES 27 B 377 SER GLY LYS GLU ARG THR GLN ARG GLU PHE SER GLU LEU SEQRES 28 B 377 ALA MET GLU ALA GLY PHE SER ARG GLU PHE LYS ALA THR SEQRES 29 B 377 TYR ILE PHE ALA ASN VAL TRP ALA LEU GLU PHE THR LYS SEQRES 1 A 377 MET GLY SER TYR ASP SER SER SER SER SER SER ASN ASP SEQRES 2 A 377 SER SER ALA ARG ASN GLU GLU ASP GLU SER CYS MET PHE SEQRES 3 A 377 ALA LEU LYS LEU LEU GLY GLY PHE ALA VAL PRO PHE THR SEQRES 4 A 377 ILE LYS ALA VAL ILE GLU LEU GLY VAL MET ASP GLN LEU SEQRES 5 A 377 LEU THR ALA GLU ARG ALA MET SER ALA GLU GLU LEU VAL SEQRES 6 A 377 ALA ALA ALA VAL ALA ALA GLN LEU PRO ARG PRO GLU VAL SEQRES 7 A 377 ALA CYS THR MET VAL ASP ARG LEU LEU ARG PHE LEU ALA SEQRES 8 A 377 SER HIS SER VAL VAL ARG CYS THR THR GLU VAL VAL VAL SEQRES 9 A 377 GLY THR ASP ASP ALA THR THR THR THR CYS CYS ARG ARG SEQRES 10 A 377 SER TYR ALA ALA SER PRO VAL CYS LYS TRP PHE ALA ARG SEQRES 11 A 377 ASN GLY VAL GLU ASP SER VAL LEU PRO LEU GLY MET MET SEQRES 12 A 377 ILE LEU ASN LYS THR PHE LEU ASP SER TRP GLN ASN ILE SEQRES 13 A 377 THR ASP ALA VAL LEU GLU GLY ALA ALA PRO PHE GLU LYS SEQRES 14 A 377 THR TYR GLY MET PRO MET PHE GLU TYR LEU SER THR ASN SEQRES 15 A 377 GLY PRO LEU ASN THR VAL PHE HIS GLU ALA MET ALA ASN SEQRES 16 A 377 HIS SER MET ILE ILE THR LYS LYS LEU LEU LYS PHE PHE SEQRES 17 A 377 ARG GLY PHE GLU GLY LEU ASP VAL LEU VAL ASP VAL GLY SEQRES 18 A 377 GLY GLY ASN GLY THR THR LEU GLN MET ILE ARG GLY GLN SEQRES 19 A 377 TYR LYS ASN MET ARG GLY ILE ASN TYR ASP LEU PRO HIS SEQRES 20 A 377 VAL ILE ALA GLN ALA ALA PRO VAL GLU GLY VAL GLU HIS SEQRES 21 A 377 VAL GLY GLY SER MET PHE ASP ASN ILE PRO ARG GLY ASN SEQRES 22 A 377 ALA VAL LEU LEU LYS TRP ILE LEU HIS ASP TRP ASP ASP SEQRES 23 A 377 LYS ALA CYS ILE LYS ILE LEU LYS ASN CYS TYR THR ALA SEQRES 24 A 377 LEU HIS VAL ARG GLY LYS VAL ILE VAL LEU GLU TYR VAL SEQRES 25 A 377 VAL PRO ASP GLU PRO GLU PRO THR LEU ALA ALA GLN GLY SEQRES 26 A 377 ALA PHE GLU LEU ASP LEU THR MET LEU VAL THR PHE GLY SEQRES 27 A 377 SER GLY LYS GLU ARG THR GLN ARG GLU PHE SER GLU LEU SEQRES 28 A 377 ALA MET GLU ALA GLY PHE SER ARG GLU PHE LYS ALA THR SEQRES 29 A 377 TYR ILE PHE ALA ASN VAL TRP ALA LEU GLU PHE THR LYS HET STL B 401 17 HET NAD B 402 44 HET EDO B 403 4 HET EDO B 404 4 HET EDO B 405 4 HET EDO B 406 4 HET ACT B 407 4 HET ACT B 408 4 HET GOL B 409 6 HET CL B 410 1 HET CL B 411 1 HET STL A 401 17 HET NAD A 402 44 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET GOL A 406 6 HET EDO A 407 4 HET ACT A 408 4 HET GOL A 409 6 HET GOL A 410 6 HET GOL A 411 6 HET GOL A 412 6 HET EDO A 413 4 HET EDO A 414 4 HET EDO A 415 4 HET GOL A 416 6 HET GOL A 417 6 HET CL A 418 1 HETNAM STL RESVERATROL HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 STL 2(C14 H12 O3) FORMUL 4 NAD 2(C21 H27 N7 O14 P2) FORMUL 5 EDO 11(C2 H6 O2) FORMUL 9 ACT 3(C2 H3 O2 1-) FORMUL 11 GOL 8(C3 H8 O3) FORMUL 12 CL 3(CL 1-) FORMUL 32 HOH *568(H2 O) HELIX 1 AA1 SER B 15 GLY B 32 1 18 HELIX 2 AA2 PHE B 34 LEU B 46 1 13 HELIX 3 AA3 GLY B 47 ALA B 55 1 9 HELIX 4 AA4 ALA B 61 VAL B 69 1 9 HELIX 5 AA5 ARG B 75 HIS B 93 1 19 HELIX 6 AA6 PRO B 123 ALA B 129 5 7 HELIX 7 AA7 VAL B 137 LEU B 145 1 9 HELIX 8 AA8 ASN B 146 TRP B 153 1 8 HELIX 9 AA9 ASN B 155 GLU B 162 1 8 HELIX 10 AB1 ALA B 165 GLY B 172 1 8 HELIX 11 AB2 PRO B 174 THR B 181 1 8 HELIX 12 AB3 ASN B 182 PHE B 208 1 27 HELIX 13 AB4 GLY B 225 TYR B 235 1 11 HELIX 14 AB5 LEU B 245 GLN B 251 1 7 HELIX 15 AB6 ILE B 280 TRP B 284 5 5 HELIX 16 AB7 ASP B 285 ALA B 299 1 15 HELIX 17 AB8 THR B 320 GLY B 338 1 19 HELIX 18 AB9 THR B 344 ALA B 355 1 12 HELIX 19 AC1 ALA A 16 GLY A 32 1 17 HELIX 20 AC2 PHE A 34 LEU A 46 1 13 HELIX 21 AC3 GLY A 47 ALA A 55 1 9 HELIX 22 AC4 ALA A 61 VAL A 69 1 9 HELIX 23 AC5 ARG A 75 HIS A 93 1 19 HELIX 24 AC6 PRO A 123 ALA A 129 5 7 HELIX 25 AC7 VAL A 137 LEU A 145 1 9 HELIX 26 AC8 ASN A 146 SER A 152 1 7 HELIX 27 AC9 ASN A 155 GLY A 163 1 9 HELIX 28 AD1 ALA A 165 GLY A 172 1 8 HELIX 29 AD2 PRO A 174 SER A 180 1 7 HELIX 30 AD3 ASN A 182 PHE A 208 1 27 HELIX 31 AD4 GLY A 225 TYR A 235 1 11 HELIX 32 AD5 LEU A 245 GLN A 251 1 7 HELIX 33 AD6 ILE A 280 TRP A 284 5 5 HELIX 34 AD7 ASP A 285 LEU A 300 1 16 HELIX 35 AD8 THR A 320 GLY A 338 1 19 HELIX 36 AD9 THR A 344 ALA A 355 1 12 SHEET 1 AA1 3 MET B 59 SER B 60 0 SHEET 2 AA1 3 CYS B 115 ALA B 121 -1 O TYR B 119 N MET B 59 SHEET 3 AA1 3 VAL B 96 VAL B 102 -1 N GLU B 101 O ARG B 116 SHEET 1 AA2 7 VAL B 258 GLY B 262 0 SHEET 2 AA2 7 ARG B 239 ASP B 244 1 N ASN B 242 O VAL B 261 SHEET 3 AA2 7 VAL B 216 VAL B 220 1 N ASP B 219 O ILE B 241 SHEET 4 AA2 7 GLY B 272 LYS B 278 1 O LEU B 276 N VAL B 218 SHEET 5 AA2 7 LEU B 300 GLU B 310 1 O ILE B 307 N LEU B 277 SHEET 6 AA2 7 VAL B 370 THR B 376 -1 O LEU B 373 N VAL B 308 SHEET 7 AA2 7 PHE B 361 PHE B 367 -1 N THR B 364 O ALA B 372 SHEET 1 AA3 3 MET A 59 SER A 60 0 SHEET 2 AA3 3 CYS A 115 ALA A 121 -1 O TYR A 119 N MET A 59 SHEET 3 AA3 3 VAL A 96 VAL A 102 -1 N ARG A 97 O ALA A 120 SHEET 1 AA4 7 VAL A 258 GLY A 262 0 SHEET 2 AA4 7 ARG A 239 ASP A 244 1 N ASN A 242 O VAL A 261 SHEET 3 AA4 7 VAL A 216 VAL A 220 1 N ASP A 219 O ILE A 241 SHEET 4 AA4 7 ALA A 274 LYS A 278 1 O LEU A 276 N VAL A 218 SHEET 5 AA4 7 LYS A 305 GLU A 310 1 O ILE A 307 N VAL A 275 SHEET 6 AA4 7 VAL A 370 THR A 376 -1 O LEU A 373 N VAL A 308 SHEET 7 AA4 7 PHE A 361 PHE A 367 -1 N THR A 364 O ALA A 372 SSBOND 1 CYS B 114 CYS B 115 1555 1555 2.29 SSBOND 2 CYS A 114 CYS A 115 1555 1555 2.49 CRYST1 96.831 96.831 168.038 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010327 0.005962 0.000000 0.00000 SCALE2 0.000000 0.011925 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005951 0.00000