HEADER TRANSCRIPTION 01-SEP-21 7VBS TITLE STRUCTURE OF THE AAA+ ATPASE DOMAIN OF THE TRANSCRIPTIONAL REGULATOR TITLE 2 GTRR IN BURKHOLDERIA CENOCEPACIA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIGMA-54 DEPENDENT TRANCSRIPTIONAL REGULATOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SIGMA-54-DEPENDENT FIS FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA; SOURCE 3 ORGANISM_TAXID: 95486; SOURCE 4 GENE: NTRC_2, A3203_18285, A8E72_13470, NCTC13227_05325; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACTERIAL ENHANCER-BINDING PROTEIN, AAA+ ATPASE, QUORUM SENSING, KEYWDS 2 TRANSCRIPTIONAL REGULATOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR X.F.YAN,Y.YONG,Y.G.GAO REVDAT 3 29-NOV-23 7VBS 1 REMARK REVDAT 2 16-FEB-22 7VBS 1 JRNL REVDAT 1 15-DEC-21 7VBS 0 JRNL AUTH X.F.YAN,C.YANG,M.WANG,Y.YONG,Y.DENG,Y.G.GAO JRNL TITL STRUCTURAL ANALYSES OF THE AAA+ ATPASE DOMAIN OF THE JRNL TITL 2 TRANSCRIPTIONAL REGULATOR GTRR IN THE BDSF QUORUM-SENSING JRNL TITL 3 SYSTEM IN BURKHOLDERIA CENOCEPACIA. JRNL REF FEBS LETT. V. 596 71 2022 JRNL REFN ISSN 0014-5793 JRNL PMID 34837384 JRNL DOI 10.1002/1873-3468.14244 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 18687 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1050 - 4.9242 1.00 1162 155 0.1645 0.1738 REMARK 3 2 4.9242 - 3.9098 1.00 1132 139 0.1349 0.1620 REMARK 3 3 3.9098 - 3.4160 1.00 1087 154 0.1720 0.1692 REMARK 3 4 3.4160 - 3.1039 1.00 1119 138 0.2088 0.2265 REMARK 3 5 3.1039 - 2.8815 1.00 1113 136 0.2218 0.2673 REMARK 3 6 2.8815 - 2.7116 1.00 1111 132 0.2280 0.2570 REMARK 3 7 2.7116 - 2.5759 1.00 1101 138 0.2225 0.2135 REMARK 3 8 2.5759 - 2.4638 1.00 1093 149 0.2320 0.2811 REMARK 3 9 2.4638 - 2.3689 1.00 1099 134 0.2368 0.2918 REMARK 3 10 2.3689 - 2.2872 1.00 1122 139 0.2516 0.3108 REMARK 3 11 2.2872 - 2.2157 1.00 1071 144 0.3363 0.3984 REMARK 3 12 2.2157 - 2.1524 1.00 1146 107 0.3060 0.3090 REMARK 3 13 2.1524 - 2.0957 1.00 1137 108 0.3040 0.3236 REMARK 3 14 2.0957 - 2.0446 1.00 1103 126 0.3315 0.3925 REMARK 3 15 2.0446 - 1.9981 0.97 1054 138 0.3665 0.3702 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1919 REMARK 3 ANGLE : 0.675 2599 REMARK 3 CHIRALITY : 0.023 291 REMARK 3 PLANARITY : 0.005 337 REMARK 3 DIHEDRAL : 13.214 695 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0075 -40.3693 2.6682 REMARK 3 T TENSOR REMARK 3 T11: 0.3721 T22: 0.2645 REMARK 3 T33: 0.4558 T12: -0.0102 REMARK 3 T13: 0.0170 T23: -0.0249 REMARK 3 L TENSOR REMARK 3 L11: 5.9191 L22: 4.4190 REMARK 3 L33: 5.3761 L12: -0.0651 REMARK 3 L13: 2.1143 L23: -0.0682 REMARK 3 S TENSOR REMARK 3 S11: 0.1277 S12: 0.0702 S13: -1.2260 REMARK 3 S21: -0.0880 S22: -0.0132 S23: 0.1930 REMARK 3 S31: 0.8622 S32: -0.0332 S33: -0.1114 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.2795 -22.4837 -7.6840 REMARK 3 T TENSOR REMARK 3 T11: 0.3889 T22: 0.3749 REMARK 3 T33: 0.3119 T12: 0.0304 REMARK 3 T13: 0.0622 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 6.0415 L22: 7.3814 REMARK 3 L33: 3.0770 L12: 1.2682 REMARK 3 L13: 0.8537 L23: -0.4449 REMARK 3 S TENSOR REMARK 3 S11: -0.0162 S12: 0.3979 S13: 0.4304 REMARK 3 S21: -0.8093 S22: 0.1388 S23: -0.0913 REMARK 3 S31: -0.2177 S32: -0.2408 S33: -0.0251 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 232 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9735 -20.5362 -2.1355 REMARK 3 T TENSOR REMARK 3 T11: 0.2597 T22: 0.2856 REMARK 3 T33: 0.2402 T12: -0.0180 REMARK 3 T13: -0.0173 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 4.8975 L22: 5.6388 REMARK 3 L33: 4.7600 L12: -0.7129 REMARK 3 L13: 1.4998 L23: 0.1134 REMARK 3 S TENSOR REMARK 3 S11: 0.0689 S12: 0.3250 S13: 0.0818 REMARK 3 S21: -0.4881 S22: 0.0093 S23: 0.0914 REMARK 3 S31: -0.3633 S32: -0.1056 S33: -0.0779 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 278 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6259 -29.5590 12.2739 REMARK 3 T TENSOR REMARK 3 T11: 0.3716 T22: 0.3626 REMARK 3 T33: 0.2524 T12: 0.0087 REMARK 3 T13: 0.0214 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 6.4756 L22: 5.5916 REMARK 3 L33: 1.0493 L12: -4.3368 REMARK 3 L13: -0.6883 L23: 0.2582 REMARK 3 S TENSOR REMARK 3 S11: -0.5115 S12: -0.7773 S13: -0.3597 REMARK 3 S21: 0.7697 S22: 0.4513 S23: 0.0614 REMARK 3 S31: 0.0059 S32: 0.0649 S33: 0.0469 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 328 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4157 -46.9170 3.1650 REMARK 3 T TENSOR REMARK 3 T11: 0.4641 T22: 0.3993 REMARK 3 T33: 0.6408 T12: 0.0533 REMARK 3 T13: -0.1046 T23: -0.0595 REMARK 3 L TENSOR REMARK 3 L11: 6.6651 L22: 7.3520 REMARK 3 L33: 6.6729 L12: 0.0176 REMARK 3 L13: -3.4558 L23: 1.8006 REMARK 3 S TENSOR REMARK 3 S11: -0.1729 S12: 1.0666 S13: -0.9492 REMARK 3 S21: 0.2252 S22: -0.2670 S23: 0.9370 REMARK 3 S31: 0.4564 S32: -1.2304 S33: 0.2275 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 329 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0868 -52.7802 -3.2941 REMARK 3 T TENSOR REMARK 3 T11: 0.8298 T22: 0.4335 REMARK 3 T33: 0.5362 T12: 0.1221 REMARK 3 T13: 0.1253 T23: 0.1292 REMARK 3 L TENSOR REMARK 3 L11: 5.4419 L22: 8.9155 REMARK 3 L33: 7.8316 L12: 0.0710 REMARK 3 L13: 3.7435 L23: -1.1592 REMARK 3 S TENSOR REMARK 3 S11: 0.2272 S12: 0.1942 S13: -1.0445 REMARK 3 S21: -1.1599 S22: 0.3085 S23: 0.3346 REMARK 3 S31: 0.4009 S32: -0.9827 S33: -0.2125 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 341 THROUGH 354 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5311 -44.6752 13.2041 REMARK 3 T TENSOR REMARK 3 T11: 0.4946 T22: 0.4813 REMARK 3 T33: 0.4536 T12: 0.1403 REMARK 3 T13: 0.0609 T23: 0.1581 REMARK 3 L TENSOR REMARK 3 L11: 4.5996 L22: 3.9394 REMARK 3 L33: 2.1451 L12: -2.0140 REMARK 3 L13: -1.0732 L23: 1.3116 REMARK 3 S TENSOR REMARK 3 S11: -0.7400 S12: -1.8112 S13: -1.0904 REMARK 3 S21: 0.7467 S22: 0.7848 S23: 0.1540 REMARK 3 S31: 0.3207 S32: 0.4727 S33: -0.0730 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 355 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0838 -39.2072 1.5927 REMARK 3 T TENSOR REMARK 3 T11: 0.4065 T22: 0.2556 REMARK 3 T33: 0.4217 T12: 0.0340 REMARK 3 T13: -0.0624 T23: 0.0611 REMARK 3 L TENSOR REMARK 3 L11: 5.8728 L22: 8.2357 REMARK 3 L33: 8.0427 L12: -6.0749 REMARK 3 L13: -6.5936 L23: 6.2820 REMARK 3 S TENSOR REMARK 3 S11: 0.3501 S12: -0.6100 S13: 0.4592 REMARK 3 S21: -0.4944 S22: 0.2463 S23: -0.4327 REMARK 3 S31: -0.1076 S32: 0.3180 S33: -0.2769 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 374 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6813 -42.7261 5.9872 REMARK 3 T TENSOR REMARK 3 T11: 0.4749 T22: 0.4318 REMARK 3 T33: 0.5852 T12: 0.0321 REMARK 3 T13: -0.0739 T23: 0.0821 REMARK 3 L TENSOR REMARK 3 L11: 3.8789 L22: 6.8899 REMARK 3 L33: 6.8700 L12: -1.0779 REMARK 3 L13: 0.5286 L23: 5.6193 REMARK 3 S TENSOR REMARK 3 S11: 0.0736 S12: 0.1496 S13: 0.3436 REMARK 3 S21: -0.7026 S22: -0.2050 S23: -0.4022 REMARK 3 S31: -0.6315 S32: 0.8390 S33: 0.2887 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VBS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1300024429. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18704 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.998 REMARK 200 RESOLUTION RANGE LOW (A) : 37.105 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5EXS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 7.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% (W/V) POLYETHYLENE GLYCOL 6000, REMARK 280 100 MM TRIS-HCL PH 8.1, 100 MM AMMONIUM PHOSPHATE DIBASIC, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.91667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 13.45833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.18750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 6.72917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.64583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ASN A 3 REMARK 465 THR A 4 REMARK 465 PRO A 5 REMARK 465 ALA A 6 REMARK 465 ILE A 7 REMARK 465 GLU A 8 REMARK 465 GLU A 9 REMARK 465 LEU A 10 REMARK 465 ASP A 11 REMARK 465 LEU A 12 REMARK 465 TYR A 13 REMARK 465 VAL A 14 REMARK 465 TRP A 15 REMARK 465 GLU A 16 REMARK 465 GLY A 17 REMARK 465 LYS A 18 REMARK 465 ALA A 19 REMARK 465 ASP A 20 REMARK 465 ILE A 21 REMARK 465 VAL A 22 REMARK 465 ASP A 23 REMARK 465 ARG A 24 REMARK 465 VAL A 25 REMARK 465 ALA A 26 REMARK 465 ARG A 27 REMARK 465 CYS A 28 REMARK 465 MET A 29 REMARK 465 ALA A 30 REMARK 465 SER A 31 REMARK 465 PHE A 32 REMARK 465 ASP A 33 REMARK 465 VAL A 34 REMARK 465 GLU A 35 REMARK 465 VAL A 36 REMARK 465 ILE A 37 REMARK 465 ARG A 38 REMARK 465 ALA A 39 REMARK 465 ASP A 40 REMARK 465 ASN A 41 REMARK 465 ALA A 42 REMARK 465 ALA A 43 REMARK 465 VAL A 44 REMARK 465 SER A 45 REMARK 465 PRO A 46 REMARK 465 GLU A 47 REMARK 465 ARG A 48 REMARK 465 ALA A 49 REMARK 465 ALA A 50 REMARK 465 LEU A 51 REMARK 465 ARG A 52 REMARK 465 ARG A 53 REMARK 465 SER A 54 REMARK 465 LEU A 55 REMARK 465 ALA A 56 REMARK 465 ILE A 57 REMARK 465 ILE A 58 REMARK 465 SER A 59 REMARK 465 VAL A 60 REMARK 465 THR A 61 REMARK 465 MET A 62 REMARK 465 ILE A 63 REMARK 465 GLU A 64 REMARK 465 GLY A 65 REMARK 465 GLY A 66 REMARK 465 ALA A 67 REMARK 465 ALA A 68 REMARK 465 PHE A 69 REMARK 465 LEU A 70 REMARK 465 ARG A 71 REMARK 465 ASP A 72 REMARK 465 TRP A 73 REMARK 465 GLN A 74 REMARK 465 ALA A 75 REMARK 465 ASN A 76 REMARK 465 ILE A 77 REMARK 465 GLY A 78 REMARK 465 MET A 79 REMARK 465 PRO A 80 REMARK 465 VAL A 81 REMARK 465 VAL A 82 REMARK 465 TRP A 83 REMARK 465 VAL A 84 REMARK 465 GLY A 85 REMARK 465 ALA A 86 REMARK 465 ALA A 87 REMARK 465 ARG A 88 REMARK 465 ASP A 89 REMARK 465 HIS A 90 REMARK 465 ASP A 91 REMARK 465 ALA A 92 REMARK 465 SER A 93 REMARK 465 GLN A 94 REMARK 465 TYR A 95 REMARK 465 PRO A 96 REMARK 465 PRO A 97 REMARK 465 GLU A 98 REMARK 465 TYR A 99 REMARK 465 SER A 100 REMARK 465 HIS A 101 REMARK 465 ILE A 102 REMARK 465 LEU A 103 REMARK 465 PRO A 104 REMARK 465 LEU A 105 REMARK 465 ASP A 106 REMARK 465 PHE A 107 REMARK 465 THR A 108 REMARK 465 CYS A 109 REMARK 465 ALA A 110 REMARK 465 GLU A 111 REMARK 465 LEU A 112 REMARK 465 ARG A 113 REMARK 465 GLY A 114 REMARK 465 MET A 115 REMARK 465 ILE A 116 REMARK 465 GLY A 117 REMARK 465 LYS A 118 REMARK 465 LEU A 119 REMARK 465 VAL A 120 REMARK 465 THR A 121 REMARK 465 GLN A 122 REMARK 465 LEU A 123 REMARK 465 ARG A 124 REMARK 465 ALA A 125 REMARK 465 HIS A 126 REMARK 465 ALA A 127 REMARK 465 ALA A 128 REMARK 465 GLU A 129 REMARK 465 THR A 130 REMARK 465 LEU A 131 REMARK 465 GLN A 132 REMARK 465 PRO A 133 REMARK 465 SER A 134 REMARK 465 GLU A 135 REMARK 465 LEU A 136 REMARK 465 VAL A 137 REMARK 465 ALA A 138 REMARK 465 LYS A 211 REMARK 465 GLY A 212 REMARK 465 SER A 213 REMARK 465 PHE A 214 REMARK 465 THR A 215 REMARK 465 GLY A 216 REMARK 465 ALA A 217 REMARK 465 VAL A 218 REMARK 465 VAL A 219 REMARK 465 ALA A 386 REMARK 465 HIS A 387 REMARK 465 ALA A 388 REMARK 465 ARG A 389 REMARK 465 SER A 390 REMARK 465 ALA A 391 REMARK 465 ALA A 392 REMARK 465 GLN A 393 REMARK 465 PRO A 394 REMARK 465 VAL A 395 REMARK 465 PRO A 396 REMARK 465 ALA A 397 REMARK 465 GLU A 398 REMARK 465 SER A 399 REMARK 465 ALA A 400 REMARK 465 ALA A 401 REMARK 465 GLU A 402 REMARK 465 VAL A 403 REMARK 465 PHE A 404 REMARK 465 VAL A 405 REMARK 465 ASP A 406 REMARK 465 ARG A 407 REMARK 465 SER A 408 REMARK 465 LYS A 409 REMARK 465 TRP A 410 REMARK 465 ASP A 411 REMARK 465 MET A 412 REMARK 465 ASN A 413 REMARK 465 GLU A 414 REMARK 465 ARG A 415 REMARK 465 ASN A 416 REMARK 465 ARG A 417 REMARK 465 VAL A 418 REMARK 465 ILE A 419 REMARK 465 ALA A 420 REMARK 465 ALA A 421 REMARK 465 LEU A 422 REMARK 465 ASP A 423 REMARK 465 ALA A 424 REMARK 465 ASN A 425 REMARK 465 GLY A 426 REMARK 465 TRP A 427 REMARK 465 ARG A 428 REMARK 465 ARG A 429 REMARK 465 GLN A 430 REMARK 465 ASP A 431 REMARK 465 THR A 432 REMARK 465 ALA A 433 REMARK 465 GLN A 434 REMARK 465 GLN A 435 REMARK 465 LEU A 436 REMARK 465 GLY A 437 REMARK 465 ILE A 438 REMARK 465 SER A 439 REMARK 465 ARG A 440 REMARK 465 LYS A 441 REMARK 465 VAL A 442 REMARK 465 LEU A 443 REMARK 465 TRP A 444 REMARK 465 GLU A 445 REMARK 465 LYS A 446 REMARK 465 MET A 447 REMARK 465 ARG A 448 REMARK 465 LYS A 449 REMARK 465 TYR A 450 REMARK 465 GLN A 451 REMARK 465 ILE A 452 REMARK 465 PHE A 453 REMARK 465 ASP A 454 REMARK 465 GLU A 455 REMARK 465 GLU A 456 REMARK 465 PRO A 457 REMARK 465 GLU A 458 REMARK 465 THR A 459 REMARK 465 ARG A 460 REMARK 465 GLU A 461 REMARK 465 SER A 462 REMARK 465 GLU A 463 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 141 CD OE1 OE2 REMARK 470 GLU A 330 CG CD OE1 OE2 REMARK 470 GLU A 331 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 155 47.76 -86.98 REMARK 500 VAL A 300 -73.22 -100.51 REMARK 500 ASN A 355 -136.98 52.21 REMARK 500 REMARK 500 REMARK: NULL DBREF1 7VBS A 1 463 UNP A0A1V2W4X9_9BURK DBREF2 7VBS A A0A1V2W4X9 1 463 SEQADV 7VBS GLY A -1 UNP A0A1V2W4X EXPRESSION TAG SEQADV 7VBS HIS A 0 UNP A0A1V2W4X EXPRESSION TAG SEQRES 1 A 465 GLY HIS MET ARG ASN THR PRO ALA ILE GLU GLU LEU ASP SEQRES 2 A 465 LEU TYR VAL TRP GLU GLY LYS ALA ASP ILE VAL ASP ARG SEQRES 3 A 465 VAL ALA ARG CYS MET ALA SER PHE ASP VAL GLU VAL ILE SEQRES 4 A 465 ARG ALA ASP ASN ALA ALA VAL SER PRO GLU ARG ALA ALA SEQRES 5 A 465 LEU ARG ARG SER LEU ALA ILE ILE SER VAL THR MET ILE SEQRES 6 A 465 GLU GLY GLY ALA ALA PHE LEU ARG ASP TRP GLN ALA ASN SEQRES 7 A 465 ILE GLY MET PRO VAL VAL TRP VAL GLY ALA ALA ARG ASP SEQRES 8 A 465 HIS ASP ALA SER GLN TYR PRO PRO GLU TYR SER HIS ILE SEQRES 9 A 465 LEU PRO LEU ASP PHE THR CYS ALA GLU LEU ARG GLY MET SEQRES 10 A 465 ILE GLY LYS LEU VAL THR GLN LEU ARG ALA HIS ALA ALA SEQRES 11 A 465 GLU THR LEU GLN PRO SER GLU LEU VAL ALA HIS SER GLU SEQRES 12 A 465 SER MET GLN ALA LEU LEU HIS GLU VAL ASP THR PHE ALA SEQRES 13 A 465 ASP CYS ASP THR ASN VAL LEU LEU HIS GLY GLU THR GLY SEQRES 14 A 465 VAL GLY LYS GLU ARG ILE ALA GLN LEU LEU HIS GLU LYS SEQRES 15 A 465 HIS SER ARG TYR ARG HIS GLY GLU PHE VAL PRO VAL ASN SEQRES 16 A 465 CYS GLY ALA ILE PRO ASP GLY LEU PHE GLU SER LEU PHE SEQRES 17 A 465 PHE GLY HIS ALA LYS GLY SER PHE THR GLY ALA VAL VAL SEQRES 18 A 465 ALA HIS LYS GLY TYR PHE GLU GLN ALA ALA GLY GLY THR SEQRES 19 A 465 LEU PHE LEU ASP GLU VAL GLY ASP LEU PRO LEU TYR GLN SEQRES 20 A 465 GLN VAL LYS LEU LEU ARG VAL LEU GLU ASP GLY ALA VAL SEQRES 21 A 465 LEU ARG VAL GLY ALA THR ALA PRO VAL LYS VAL ASP PHE SEQRES 22 A 465 ARG LEU VAL ALA ALA SER ASN LYS LYS LEU PRO GLN LEU SEQRES 23 A 465 VAL LYS GLU GLY LEU PHE ARG ALA ASP LEU TYR TYR ARG SEQRES 24 A 465 LEU ALA VAL ILE GLU LEU SER ILE PRO SER LEU GLU GLU SEQRES 25 A 465 ARG GLY ALA VAL ASP LYS ILE ALA LEU PHE LYS SER PHE SEQRES 26 A 465 VAL ALA GLN VAL VAL GLY GLU GLU ARG LEU ALA GLU LEU SEQRES 27 A 465 SER ASP LEU PRO TYR TRP LEU THR ASP SER VAL ALA ASP SEQRES 28 A 465 SER TYR PHE PRO GLY ASN VAL ARG GLU LEU ARG ASN LEU SEQRES 29 A 465 ALA GLU ARG VAL GLY VAL THR VAL ARG GLN THR GLY GLY SEQRES 30 A 465 TRP ASP ALA ALA ARG LEU GLN ARG LEU ILE ALA HIS ALA SEQRES 31 A 465 ARG SER ALA ALA GLN PRO VAL PRO ALA GLU SER ALA ALA SEQRES 32 A 465 GLU VAL PHE VAL ASP ARG SER LYS TRP ASP MET ASN GLU SEQRES 33 A 465 ARG ASN ARG VAL ILE ALA ALA LEU ASP ALA ASN GLY TRP SEQRES 34 A 465 ARG ARG GLN ASP THR ALA GLN GLN LEU GLY ILE SER ARG SEQRES 35 A 465 LYS VAL LEU TRP GLU LYS MET ARG LYS TYR GLN ILE PHE SEQRES 36 A 465 ASP GLU GLU PRO GLU THR ARG GLU SER GLU HET PO4 A 501 5 HETNAM PO4 PHOSPHATE ION FORMUL 2 PO4 O4 P 3- FORMUL 3 HOH *149(H2 O) HELIX 1 AA1 SER A 140 ALA A 154 1 15 HELIX 2 AA2 GLY A 169 HIS A 181 1 13 HELIX 3 AA3 ARG A 183 GLY A 187 5 5 HELIX 4 AA4 PRO A 198 GLY A 200 5 3 HELIX 5 AA5 LEU A 201 GLY A 208 1 8 HELIX 6 AA6 GLY A 223 ALA A 228 1 6 HELIX 7 AA7 GLU A 237 LEU A 241 5 5 HELIX 8 AA8 PRO A 242 GLY A 256 1 15 HELIX 9 AA9 LYS A 280 GLU A 287 1 8 HELIX 10 AB1 ARG A 291 ALA A 299 1 9 HELIX 11 AB2 SER A 307 GLY A 312 1 6 HELIX 12 AB3 GLY A 312 GLY A 329 1 18 HELIX 13 AB4 GLY A 329 LEU A 336 1 8 HELIX 14 AB5 PRO A 340 ASP A 349 1 10 HELIX 15 AB6 GLY A 354 GLY A 374 1 21 HELIX 16 AB7 ASP A 377 ARG A 383 1 7 SHEET 1 AA1 5 PHE A 189 ASN A 193 0 SHEET 2 AA1 5 THR A 232 ASP A 236 1 O PHE A 234 N VAL A 192 SHEET 3 AA1 5 ARG A 272 SER A 277 1 O ARG A 272 N LEU A 233 SHEET 4 AA1 5 VAL A 160 HIS A 163 1 N LEU A 162 O ALA A 275 SHEET 5 AA1 5 ILE A 301 SER A 304 1 O ILE A 301 N LEU A 161 SHEET 1 AA2 2 ALA A 257 VAL A 258 0 SHEET 2 AA2 2 VAL A 267 LYS A 268 -1 O VAL A 267 N VAL A 258 CRYST1 108.678 108.678 40.375 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009201 0.005312 0.000000 0.00000 SCALE2 0.000000 0.010625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024768 0.00000