HEADER TRANSLOCASE 06-SEP-21 7VD2 TITLE HUMAN TOM COMPLEX WITHOUT CROSS-LINKING COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM6 HOMOLOG; COMPND 3 CHAIN: A, F; COMPND 4 SYNONYM: OVEREXPRESSED BREAST TUMOR PROTEIN,TRANSLOCASE OF OUTER COMPND 5 MEMBRANE 6 KDA SUBUNIT HOMOLOG; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOG; COMPND 9 CHAIN: D, E; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7 HOMOLOG; COMPND 13 CHAIN: G, J; COMPND 14 SYNONYM: TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT HOMOLOG; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22 HOMOLOG; COMPND 18 CHAIN: H, C; COMPND 19 SYNONYM: HTOM22,1C9-2,TRANSLOCASE OF OUTER MEMBRANE 22 KDA SUBUNIT COMPND 20 HOMOLOG; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 HOMOLOG; COMPND 24 CHAIN: B, I; COMPND 25 SYNONYM: PROTEIN HAYMAKER,TRANSLOCASE OF OUTER MEMBRANE 40 KDA COMPND 26 SUBUNIT HOMOLOG,P38.5; COMPND 27 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TOMM6, OBTP, TOM6; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TOMM5, C9ORF105, TOM5; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: TOMM7, TOM7, TOMM07, AD-014; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: TOMM22, TOM22; SOURCE 27 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 29 MOL_ID: 5; SOURCE 30 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 31 ORGANISM_COMMON: HUMAN; SOURCE 32 ORGANISM_TAXID: 9606; SOURCE 33 GENE: TOMM40, C19ORF1, PEREC1, TOM40; SOURCE 34 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS TOM CORE COMPLEX, CRYO-EM, TRANSLOCASE EXPDTA ELECTRON MICROSCOPY AUTHOR D.S.LIU,S.F.SUI REVDAT 1 13-JUL-22 7VD2 0 JRNL AUTH J.SU,D.LIU,F.YANG,M.Q.ZUO,C.LI,M.Q.DONG,S.SUN,S.F.SUI JRNL TITL STRUCTURAL BASIS OF TOM20 AND TOM22 CYTOSOLIC DOMAINS AS THE JRNL TITL 2 HUMAN TOM COMPLEX RECEPTORS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 58119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 35733257 JRNL DOI 10.1073/PNAS.2200158119 REMARK 2 REMARK 2 RESOLUTION. 2.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.530 REMARK 3 NUMBER OF PARTICLES : 347651 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7VD2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1300024515. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN TOM COMPLEX WITHOUT CROSS REMARK 245 -LINKING REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1300.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, F, G, E, H, C, J, B, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 THR A 5 REMARK 465 VAL A 6 REMARK 465 PRO A 7 REMARK 465 VAL A 8 REMARK 465 SER A 9 REMARK 465 ALA A 10 REMARK 465 ALA A 11 REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 465 ALA A 14 REMARK 465 ASN A 15 REMARK 465 GLU A 16 REMARK 465 THR A 17 REMARK 465 PRO A 18 REMARK 465 GLU A 19 REMARK 465 ILE A 20 REMARK 465 PRO A 21 REMARK 465 ASP A 22 REMARK 465 ASN A 23 REMARK 465 VAL A 24 REMARK 465 MET A 68 REMARK 465 ALA A 69 REMARK 465 PRO A 70 REMARK 465 GLN A 71 REMARK 465 PRO A 72 REMARK 465 GLY A 73 REMARK 465 VAL A 74 REMARK 465 MET D 1 REMARK 465 PHE D 2 REMARK 465 ARG D 3 REMARK 465 ILE D 4 REMARK 465 GLU D 5 REMARK 465 GLY D 6 REMARK 465 LEU D 7 REMARK 465 ALA D 8 REMARK 465 PRO D 9 REMARK 465 LYS D 10 REMARK 465 LEU D 11 REMARK 465 ASP D 12 REMARK 465 ASP D 49 REMARK 465 SER D 50 REMARK 465 ILE D 51 REMARK 465 MET F 1 REMARK 465 ALA F 2 REMARK 465 SER F 3 REMARK 465 SER F 4 REMARK 465 THR F 5 REMARK 465 VAL F 6 REMARK 465 PRO F 7 REMARK 465 VAL F 8 REMARK 465 SER F 9 REMARK 465 ALA F 10 REMARK 465 ALA F 11 REMARK 465 GLY F 12 REMARK 465 SER F 13 REMARK 465 ALA F 14 REMARK 465 ASN F 15 REMARK 465 GLU F 16 REMARK 465 THR F 17 REMARK 465 PRO F 18 REMARK 465 GLU F 19 REMARK 465 ILE F 20 REMARK 465 PRO F 21 REMARK 465 ASP F 22 REMARK 465 ASN F 23 REMARK 465 VAL F 24 REMARK 465 MET F 68 REMARK 465 ALA F 69 REMARK 465 PRO F 70 REMARK 465 GLN F 71 REMARK 465 PRO F 72 REMARK 465 GLY F 73 REMARK 465 VAL F 74 REMARK 465 MET G 1 REMARK 465 MET E 1 REMARK 465 PHE E 2 REMARK 465 ARG E 3 REMARK 465 ILE E 4 REMARK 465 GLU E 5 REMARK 465 GLY E 6 REMARK 465 LEU E 7 REMARK 465 ALA E 8 REMARK 465 PRO E 9 REMARK 465 LYS E 10 REMARK 465 LEU E 11 REMARK 465 ASP E 12 REMARK 465 ASP E 49 REMARK 465 SER E 50 REMARK 465 ILE E 51 REMARK 465 MET H 1 REMARK 465 ALA H 2 REMARK 465 ALA H 3 REMARK 465 ALA H 4 REMARK 465 VAL H 5 REMARK 465 ALA H 6 REMARK 465 ALA H 7 REMARK 465 ALA H 8 REMARK 465 GLY H 9 REMARK 465 ALA H 10 REMARK 465 GLY H 11 REMARK 465 GLU H 12 REMARK 465 PRO H 13 REMARK 465 GLN H 14 REMARK 465 SER H 15 REMARK 465 PRO H 16 REMARK 465 ASP H 17 REMARK 465 GLU H 18 REMARK 465 LEU H 19 REMARK 465 LEU H 20 REMARK 465 PRO H 21 REMARK 465 LYS H 22 REMARK 465 GLY H 23 REMARK 465 ASP H 24 REMARK 465 ALA H 25 REMARK 465 GLU H 26 REMARK 465 LYS H 27 REMARK 465 PRO H 28 REMARK 465 GLU H 29 REMARK 465 GLU H 30 REMARK 465 GLU H 31 REMARK 465 LEU H 32 REMARK 465 GLU H 33 REMARK 465 GLU H 34 REMARK 465 ASP H 35 REMARK 465 ASP H 36 REMARK 465 ASP H 37 REMARK 465 GLU H 38 REMARK 465 GLU H 39 REMARK 465 LEU H 40 REMARK 465 ASP H 41 REMARK 465 GLU H 42 REMARK 465 THR H 43 REMARK 465 LEU H 44 REMARK 465 SER H 45 REMARK 465 GLU H 46 REMARK 465 ARG H 47 REMARK 465 LEU H 48 REMARK 465 TRP H 49 REMARK 465 GLY H 50 REMARK 465 LEU H 51 REMARK 465 THR H 52 REMARK 465 GLU H 53 REMARK 465 MET H 54 REMARK 465 PHE H 55 REMARK 465 PRO H 56 REMARK 465 GLU H 57 REMARK 465 ARG H 58 REMARK 465 VAL H 59 REMARK 465 ARG H 60 REMARK 465 SER H 61 REMARK 465 ALA H 62 REMARK 465 ILE H 119 REMARK 465 LEU H 120 REMARK 465 LEU H 121 REMARK 465 GLY H 122 REMARK 465 PRO H 123 REMARK 465 ASN H 124 REMARK 465 THR H 125 REMARK 465 GLY H 126 REMARK 465 LEU H 127 REMARK 465 SER H 128 REMARK 465 GLY H 129 REMARK 465 GLY H 130 REMARK 465 MET H 131 REMARK 465 PRO H 132 REMARK 465 GLY H 133 REMARK 465 ALA H 134 REMARK 465 LEU H 135 REMARK 465 PRO H 136 REMARK 465 SER H 137 REMARK 465 LEU H 138 REMARK 465 PRO H 139 REMARK 465 GLY H 140 REMARK 465 LYS H 141 REMARK 465 ILE H 142 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ALA C 3 REMARK 465 ALA C 4 REMARK 465 VAL C 5 REMARK 465 ALA C 6 REMARK 465 ALA C 7 REMARK 465 ALA C 8 REMARK 465 GLY C 9 REMARK 465 ALA C 10 REMARK 465 GLY C 11 REMARK 465 GLU C 12 REMARK 465 PRO C 13 REMARK 465 GLN C 14 REMARK 465 SER C 15 REMARK 465 PRO C 16 REMARK 465 ASP C 17 REMARK 465 GLU C 18 REMARK 465 LEU C 19 REMARK 465 LEU C 20 REMARK 465 PRO C 21 REMARK 465 LYS C 22 REMARK 465 GLY C 23 REMARK 465 ASP C 24 REMARK 465 ALA C 25 REMARK 465 GLU C 26 REMARK 465 LYS C 27 REMARK 465 PRO C 28 REMARK 465 GLU C 29 REMARK 465 GLU C 30 REMARK 465 GLU C 31 REMARK 465 LEU C 32 REMARK 465 GLU C 33 REMARK 465 GLU C 34 REMARK 465 ASP C 35 REMARK 465 ASP C 36 REMARK 465 ASP C 37 REMARK 465 GLU C 38 REMARK 465 GLU C 39 REMARK 465 LEU C 40 REMARK 465 ASP C 41 REMARK 465 GLU C 42 REMARK 465 THR C 43 REMARK 465 LEU C 44 REMARK 465 SER C 45 REMARK 465 GLU C 46 REMARK 465 ARG C 47 REMARK 465 LEU C 48 REMARK 465 TRP C 49 REMARK 465 GLY C 50 REMARK 465 LEU C 51 REMARK 465 THR C 52 REMARK 465 GLU C 53 REMARK 465 MET C 54 REMARK 465 PHE C 55 REMARK 465 PRO C 56 REMARK 465 GLU C 57 REMARK 465 ARG C 58 REMARK 465 VAL C 59 REMARK 465 ARG C 60 REMARK 465 SER C 61 REMARK 465 ILE C 119 REMARK 465 LEU C 120 REMARK 465 LEU C 121 REMARK 465 GLY C 122 REMARK 465 PRO C 123 REMARK 465 ASN C 124 REMARK 465 THR C 125 REMARK 465 GLY C 126 REMARK 465 LEU C 127 REMARK 465 SER C 128 REMARK 465 GLY C 129 REMARK 465 GLY C 130 REMARK 465 MET C 131 REMARK 465 PRO C 132 REMARK 465 GLY C 133 REMARK 465 ALA C 134 REMARK 465 LEU C 135 REMARK 465 PRO C 136 REMARK 465 SER C 137 REMARK 465 LEU C 138 REMARK 465 PRO C 139 REMARK 465 GLY C 140 REMARK 465 LYS C 141 REMARK 465 ILE C 142 REMARK 465 MET J 1 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ASN B 3 REMARK 465 VAL B 4 REMARK 465 LEU B 5 REMARK 465 ALA B 6 REMARK 465 ALA B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 PRO B 10 REMARK 465 PRO B 11 REMARK 465 ALA B 12 REMARK 465 GLY B 13 REMARK 465 PRO B 14 REMARK 465 PRO B 15 REMARK 465 PRO B 16 REMARK 465 PRO B 17 REMARK 465 PRO B 18 REMARK 465 ALA B 19 REMARK 465 PRO B 20 REMARK 465 ALA B 21 REMARK 465 LEU B 22 REMARK 465 VAL B 23 REMARK 465 GLY B 24 REMARK 465 LEU B 25 REMARK 465 PRO B 26 REMARK 465 PRO B 27 REMARK 465 PRO B 28 REMARK 465 PRO B 29 REMARK 465 PRO B 30 REMARK 465 SER B 31 REMARK 465 PRO B 32 REMARK 465 PRO B 33 REMARK 465 GLY B 34 REMARK 465 PHE B 35 REMARK 465 THR B 36 REMARK 465 LEU B 37 REMARK 465 PRO B 38 REMARK 465 PRO B 39 REMARK 465 LEU B 40 REMARK 465 GLY B 41 REMARK 465 GLY B 42 REMARK 465 SER B 43 REMARK 465 LEU B 44 REMARK 465 GLY B 45 REMARK 465 ALA B 46 REMARK 465 GLY B 47 REMARK 465 THR B 48 REMARK 465 SER B 49 REMARK 465 THR B 50 REMARK 465 SER B 51 REMARK 465 ARG B 52 REMARK 465 SER B 53 REMARK 465 SER B 54 REMARK 465 GLU B 55 REMARK 465 ARG B 56 REMARK 465 THR B 57 REMARK 465 PRO B 58 REMARK 465 GLY B 59 REMARK 465 ALA B 60 REMARK 465 ALA B 61 REMARK 465 THR B 62 REMARK 465 ALA B 63 REMARK 465 SER B 64 REMARK 465 ALA B 65 REMARK 465 SER B 66 REMARK 465 GLY B 67 REMARK 465 ALA B 68 REMARK 465 ALA B 69 REMARK 465 GLU B 70 REMARK 465 ASP B 71 REMARK 465 GLY B 72 REMARK 465 ALA B 73 REMARK 465 CYS B 74 REMARK 465 GLY B 75 REMARK 465 MET I 1 REMARK 465 GLY I 2 REMARK 465 ASN I 3 REMARK 465 VAL I 4 REMARK 465 LEU I 5 REMARK 465 ALA I 6 REMARK 465 ALA I 7 REMARK 465 SER I 8 REMARK 465 SER I 9 REMARK 465 PRO I 10 REMARK 465 PRO I 11 REMARK 465 ALA I 12 REMARK 465 GLY I 13 REMARK 465 PRO I 14 REMARK 465 PRO I 15 REMARK 465 PRO I 16 REMARK 465 PRO I 17 REMARK 465 PRO I 18 REMARK 465 ALA I 19 REMARK 465 PRO I 20 REMARK 465 ALA I 21 REMARK 465 LEU I 22 REMARK 465 VAL I 23 REMARK 465 GLY I 24 REMARK 465 LEU I 25 REMARK 465 PRO I 26 REMARK 465 PRO I 27 REMARK 465 PRO I 28 REMARK 465 PRO I 29 REMARK 465 PRO I 30 REMARK 465 SER I 31 REMARK 465 PRO I 32 REMARK 465 PRO I 33 REMARK 465 GLY I 34 REMARK 465 PHE I 35 REMARK 465 THR I 36 REMARK 465 LEU I 37 REMARK 465 PRO I 38 REMARK 465 PRO I 39 REMARK 465 LEU I 40 REMARK 465 GLY I 41 REMARK 465 GLY I 42 REMARK 465 SER I 43 REMARK 465 LEU I 44 REMARK 465 GLY I 45 REMARK 465 ALA I 46 REMARK 465 GLY I 47 REMARK 465 THR I 48 REMARK 465 SER I 49 REMARK 465 THR I 50 REMARK 465 SER I 51 REMARK 465 ARG I 52 REMARK 465 SER I 53 REMARK 465 SER I 54 REMARK 465 GLU I 55 REMARK 465 ARG I 56 REMARK 465 THR I 57 REMARK 465 PRO I 58 REMARK 465 GLY I 59 REMARK 465 ALA I 60 REMARK 465 ALA I 61 REMARK 465 THR I 62 REMARK 465 ALA I 63 REMARK 465 SER I 64 REMARK 465 ALA I 65 REMARK 465 SER I 66 REMARK 465 GLY I 67 REMARK 465 ALA I 68 REMARK 465 ALA I 69 REMARK 465 GLU I 70 REMARK 465 ASP I 71 REMARK 465 GLY I 72 REMARK 465 ALA I 73 REMARK 465 CYS I 74 REMARK 465 GLY I 75 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG F 38 -1.17 67.53 REMARK 500 LYS G 6 -38.49 -39.65 REMARK 500 GLU E 14 18.45 57.63 REMARK 500 SER J 5 174.12 178.35 REMARK 500 SER B 110 -175.60 -170.57 REMARK 500 ASN B 207 50.38 38.72 REMARK 500 HIS B 271 114.52 -161.60 REMARK 500 SER B 298 148.56 -171.06 REMARK 500 SER I 110 -176.34 -171.29 REMARK 500 GLN I 182 -122.37 55.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-31904 RELATED DB: EMDB REMARK 900 TOM CORE COMPLEX DBREF 7VD2 A 1 74 UNP Q96B49 TOM6_HUMAN 1 74 DBREF 7VD2 D 1 51 UNP Q8N4H5 TOM5_HUMAN 1 51 DBREF 7VD2 F 1 74 UNP Q96B49 TOM6_HUMAN 1 74 DBREF 7VD2 G 1 55 UNP Q9P0U1 TOM7_HUMAN 1 55 DBREF 7VD2 E 1 51 UNP Q8N4H5 TOM5_HUMAN 1 51 DBREF 7VD2 H 1 142 UNP Q9NS69 TOM22_HUMAN 1 142 DBREF 7VD2 C 1 142 UNP Q9NS69 TOM22_HUMAN 1 142 DBREF 7VD2 J 1 55 UNP Q9P0U1 TOM7_HUMAN 1 55 DBREF 7VD2 B 1 361 UNP O96008 TOM40_HUMAN 1 361 DBREF 7VD2 I 1 361 UNP O96008 TOM40_HUMAN 1 361 SEQRES 1 A 74 MET ALA SER SER THR VAL PRO VAL SER ALA ALA GLY SER SEQRES 2 A 74 ALA ASN GLU THR PRO GLU ILE PRO ASP ASN VAL GLY ASP SEQRES 3 A 74 TRP LEU ARG GLY VAL TYR ARG PHE ALA THR ASP ARG ASN SEQRES 4 A 74 ASP PHE ARG ARG ASN LEU ILE LEU ASN LEU GLY LEU PHE SEQRES 5 A 74 ALA ALA GLY VAL TRP LEU ALA ARG ASN LEU SER ASP ILE SEQRES 6 A 74 ASP LEU MET ALA PRO GLN PRO GLY VAL SEQRES 1 D 51 MET PHE ARG ILE GLU GLY LEU ALA PRO LYS LEU ASP PRO SEQRES 2 D 51 GLU GLU MET LYS ARG LYS MET ARG GLU ASP VAL ILE SER SEQRES 3 D 51 SER ILE ARG ASN PHE LEU ILE TYR VAL ALA LEU LEU ARG SEQRES 4 D 51 VAL THR PRO PHE ILE LEU LYS LYS LEU ASP SER ILE SEQRES 1 F 74 MET ALA SER SER THR VAL PRO VAL SER ALA ALA GLY SER SEQRES 2 F 74 ALA ASN GLU THR PRO GLU ILE PRO ASP ASN VAL GLY ASP SEQRES 3 F 74 TRP LEU ARG GLY VAL TYR ARG PHE ALA THR ASP ARG ASN SEQRES 4 F 74 ASP PHE ARG ARG ASN LEU ILE LEU ASN LEU GLY LEU PHE SEQRES 5 F 74 ALA ALA GLY VAL TRP LEU ALA ARG ASN LEU SER ASP ILE SEQRES 6 F 74 ASP LEU MET ALA PRO GLN PRO GLY VAL SEQRES 1 G 55 MET VAL LYS LEU SER LYS GLU ALA LYS GLN ARG LEU GLN SEQRES 2 G 55 GLN LEU PHE LYS GLY SER GLN PHE ALA ILE ARG TRP GLY SEQRES 3 G 55 PHE ILE PRO LEU VAL ILE TYR LEU GLY PHE LYS ARG GLY SEQRES 4 G 55 ALA ASP PRO GLY MET PRO GLU PRO THR VAL LEU SER LEU SEQRES 5 G 55 LEU TRP GLY SEQRES 1 E 51 MET PHE ARG ILE GLU GLY LEU ALA PRO LYS LEU ASP PRO SEQRES 2 E 51 GLU GLU MET LYS ARG LYS MET ARG GLU ASP VAL ILE SER SEQRES 3 E 51 SER ILE ARG ASN PHE LEU ILE TYR VAL ALA LEU LEU ARG SEQRES 4 E 51 VAL THR PRO PHE ILE LEU LYS LYS LEU ASP SER ILE SEQRES 1 H 142 MET ALA ALA ALA VAL ALA ALA ALA GLY ALA GLY GLU PRO SEQRES 2 H 142 GLN SER PRO ASP GLU LEU LEU PRO LYS GLY ASP ALA GLU SEQRES 3 H 142 LYS PRO GLU GLU GLU LEU GLU GLU ASP ASP ASP GLU GLU SEQRES 4 H 142 LEU ASP GLU THR LEU SER GLU ARG LEU TRP GLY LEU THR SEQRES 5 H 142 GLU MET PHE PRO GLU ARG VAL ARG SER ALA ALA GLY ALA SEQRES 6 H 142 THR PHE ASP LEU SER LEU PHE VAL ALA GLN LYS MET TYR SEQRES 7 H 142 ARG PHE SER ARG ALA ALA LEU TRP ILE GLY THR THR SER SEQRES 8 H 142 PHE MET ILE LEU VAL LEU PRO VAL VAL PHE GLU THR GLU SEQRES 9 H 142 LYS LEU GLN MET GLU GLN GLN GLN GLN LEU GLN GLN ARG SEQRES 10 H 142 GLN ILE LEU LEU GLY PRO ASN THR GLY LEU SER GLY GLY SEQRES 11 H 142 MET PRO GLY ALA LEU PRO SER LEU PRO GLY LYS ILE SEQRES 1 C 142 MET ALA ALA ALA VAL ALA ALA ALA GLY ALA GLY GLU PRO SEQRES 2 C 142 GLN SER PRO ASP GLU LEU LEU PRO LYS GLY ASP ALA GLU SEQRES 3 C 142 LYS PRO GLU GLU GLU LEU GLU GLU ASP ASP ASP GLU GLU SEQRES 4 C 142 LEU ASP GLU THR LEU SER GLU ARG LEU TRP GLY LEU THR SEQRES 5 C 142 GLU MET PHE PRO GLU ARG VAL ARG SER ALA ALA GLY ALA SEQRES 6 C 142 THR PHE ASP LEU SER LEU PHE VAL ALA GLN LYS MET TYR SEQRES 7 C 142 ARG PHE SER ARG ALA ALA LEU TRP ILE GLY THR THR SER SEQRES 8 C 142 PHE MET ILE LEU VAL LEU PRO VAL VAL PHE GLU THR GLU SEQRES 9 C 142 LYS LEU GLN MET GLU GLN GLN GLN GLN LEU GLN GLN ARG SEQRES 10 C 142 GLN ILE LEU LEU GLY PRO ASN THR GLY LEU SER GLY GLY SEQRES 11 C 142 MET PRO GLY ALA LEU PRO SER LEU PRO GLY LYS ILE SEQRES 1 J 55 MET VAL LYS LEU SER LYS GLU ALA LYS GLN ARG LEU GLN SEQRES 2 J 55 GLN LEU PHE LYS GLY SER GLN PHE ALA ILE ARG TRP GLY SEQRES 3 J 55 PHE ILE PRO LEU VAL ILE TYR LEU GLY PHE LYS ARG GLY SEQRES 4 J 55 ALA ASP PRO GLY MET PRO GLU PRO THR VAL LEU SER LEU SEQRES 5 J 55 LEU TRP GLY SEQRES 1 B 361 MET GLY ASN VAL LEU ALA ALA SER SER PRO PRO ALA GLY SEQRES 2 B 361 PRO PRO PRO PRO PRO ALA PRO ALA LEU VAL GLY LEU PRO SEQRES 3 B 361 PRO PRO PRO PRO SER PRO PRO GLY PHE THR LEU PRO PRO SEQRES 4 B 361 LEU GLY GLY SER LEU GLY ALA GLY THR SER THR SER ARG SEQRES 5 B 361 SER SER GLU ARG THR PRO GLY ALA ALA THR ALA SER ALA SEQRES 6 B 361 SER GLY ALA ALA GLU ASP GLY ALA CYS GLY CYS LEU PRO SEQRES 7 B 361 ASN PRO GLY THR PHE GLU GLU CYS HIS ARG LYS CYS LYS SEQRES 8 B 361 GLU LEU PHE PRO ILE GLN MET GLU GLY VAL LYS LEU THR SEQRES 9 B 361 VAL ASN LYS GLY LEU SER ASN HIS PHE GLN VAL ASN HIS SEQRES 10 B 361 THR VAL ALA LEU SER THR ILE GLY GLU SER ASN TYR HIS SEQRES 11 B 361 PHE GLY VAL THR TYR VAL GLY THR LYS GLN LEU SER PRO SEQRES 12 B 361 THR GLU ALA PHE PRO VAL LEU VAL GLY ASP MET ASP ASN SEQRES 13 B 361 SER GLY SER LEU ASN ALA GLN VAL ILE HIS GLN LEU GLY SEQRES 14 B 361 PRO GLY LEU ARG SER LYS MET ALA ILE GLN THR GLN GLN SEQRES 15 B 361 SER LYS PHE VAL ASN TRP GLN VAL ASP GLY GLU TYR ARG SEQRES 16 B 361 GLY SER ASP PHE THR ALA ALA VAL THR LEU GLY ASN PRO SEQRES 17 B 361 ASP VAL LEU VAL GLY SER GLY ILE LEU VAL ALA HIS TYR SEQRES 18 B 361 LEU GLN SER ILE THR PRO CYS LEU ALA LEU GLY GLY GLU SEQRES 19 B 361 LEU VAL TYR HIS ARG ARG PRO GLY GLU GLU GLY THR VAL SEQRES 20 B 361 MET SER LEU ALA GLY LYS TYR THR LEU ASN ASN TRP LEU SEQRES 21 B 361 ALA THR VAL THR LEU GLY GLN ALA GLY MET HIS ALA THR SEQRES 22 B 361 TYR TYR HIS LYS ALA SER ASP GLN LEU GLN VAL GLY VAL SEQRES 23 B 361 GLU PHE GLU ALA SER THR ARG MET GLN ASP THR SER VAL SEQRES 24 B 361 SER PHE GLY TYR GLN LEU ASP LEU PRO LYS ALA ASN LEU SEQRES 25 B 361 LEU PHE LYS GLY SER VAL ASP SER ASN TRP ILE VAL GLY SEQRES 26 B 361 ALA THR LEU GLU LYS LYS LEU PRO PRO LEU PRO LEU THR SEQRES 27 B 361 LEU ALA LEU GLY ALA PHE LEU ASN HIS ARG LYS ASN LYS SEQRES 28 B 361 PHE GLN CYS GLY PHE GLY LEU THR ILE GLY SEQRES 1 I 361 MET GLY ASN VAL LEU ALA ALA SER SER PRO PRO ALA GLY SEQRES 2 I 361 PRO PRO PRO PRO PRO ALA PRO ALA LEU VAL GLY LEU PRO SEQRES 3 I 361 PRO PRO PRO PRO SER PRO PRO GLY PHE THR LEU PRO PRO SEQRES 4 I 361 LEU GLY GLY SER LEU GLY ALA GLY THR SER THR SER ARG SEQRES 5 I 361 SER SER GLU ARG THR PRO GLY ALA ALA THR ALA SER ALA SEQRES 6 I 361 SER GLY ALA ALA GLU ASP GLY ALA CYS GLY CYS LEU PRO SEQRES 7 I 361 ASN PRO GLY THR PHE GLU GLU CYS HIS ARG LYS CYS LYS SEQRES 8 I 361 GLU LEU PHE PRO ILE GLN MET GLU GLY VAL LYS LEU THR SEQRES 9 I 361 VAL ASN LYS GLY LEU SER ASN HIS PHE GLN VAL ASN HIS SEQRES 10 I 361 THR VAL ALA LEU SER THR ILE GLY GLU SER ASN TYR HIS SEQRES 11 I 361 PHE GLY VAL THR TYR VAL GLY THR LYS GLN LEU SER PRO SEQRES 12 I 361 THR GLU ALA PHE PRO VAL LEU VAL GLY ASP MET ASP ASN SEQRES 13 I 361 SER GLY SER LEU ASN ALA GLN VAL ILE HIS GLN LEU GLY SEQRES 14 I 361 PRO GLY LEU ARG SER LYS MET ALA ILE GLN THR GLN GLN SEQRES 15 I 361 SER LYS PHE VAL ASN TRP GLN VAL ASP GLY GLU TYR ARG SEQRES 16 I 361 GLY SER ASP PHE THR ALA ALA VAL THR LEU GLY ASN PRO SEQRES 17 I 361 ASP VAL LEU VAL GLY SER GLY ILE LEU VAL ALA HIS TYR SEQRES 18 I 361 LEU GLN SER ILE THR PRO CYS LEU ALA LEU GLY GLY GLU SEQRES 19 I 361 LEU VAL TYR HIS ARG ARG PRO GLY GLU GLU GLY THR VAL SEQRES 20 I 361 MET SER LEU ALA GLY LYS TYR THR LEU ASN ASN TRP LEU SEQRES 21 I 361 ALA THR VAL THR LEU GLY GLN ALA GLY MET HIS ALA THR SEQRES 22 I 361 TYR TYR HIS LYS ALA SER ASP GLN LEU GLN VAL GLY VAL SEQRES 23 I 361 GLU PHE GLU ALA SER THR ARG MET GLN ASP THR SER VAL SEQRES 24 I 361 SER PHE GLY TYR GLN LEU ASP LEU PRO LYS ALA ASN LEU SEQRES 25 I 361 LEU PHE LYS GLY SER VAL ASP SER ASN TRP ILE VAL GLY SEQRES 26 I 361 ALA THR LEU GLU LYS LYS LEU PRO PRO LEU PRO LEU THR SEQRES 27 I 361 LEU ALA LEU GLY ALA PHE LEU ASN HIS ARG LYS ASN LYS SEQRES 28 I 361 PHE GLN CYS GLY PHE GLY LEU THR ILE GLY HET UND A 101 11 HET PC1 A 102 54 HET UND A 103 11 HET PC1 A 104 54 HET UND F 101 11 HET PC1 F 102 54 HET UND F 103 11 HET PC1 G 101 54 HET UND G 102 11 HET PC1 G 103 54 HET PC1 G 104 54 HET PC1 G 105 54 HET PC1 H 201 54 HET PC1 H 202 54 HET PC1 H 203 54 HET UND H 204 11 HET PC1 C 201 54 HET PC1 C 202 54 HET UND C 203 11 HET PC1 J 101 54 HET UND J 102 11 HET PC1 J 103 54 HET PC1 J 104 54 HET PC1 J 105 54 HET PC1 B 401 54 HET PC1 B 402 54 HET UND B 403 11 HET PC1 B 404 54 HET UND B 405 11 HET PC1 B 406 54 HET UND B 407 11 HET PC1 B 408 54 HET UND B 409 11 HET PC1 I 401 54 HET PC1 I 402 54 HET PC1 I 403 54 HET UND I 404 11 HET UND I 405 11 HET PC1 I 406 54 HET UND I 407 11 HET UND I 408 11 HET PC1 I 409 54 HET PC1 I 410 54 HETNAM UND UNDECANE HETNAM PC1 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE HETSYN UND LIPID FRAGMENT HETSYN PC1 3-SN-PHOSPHATIDYLCHOLINE FORMUL 11 UND 16(C11 H24) FORMUL 12 PC1 27(C44 H88 N O8 P) HELIX 1 AA1 ASP A 26 ASP A 37 1 12 HELIX 2 AA2 ASP A 40 ARG A 60 1 21 HELIX 3 AA3 GLU D 14 LEU D 48 1 35 HELIX 4 AA4 ASP F 26 THR F 36 1 11 HELIX 5 AA5 ASP F 40 ASN F 61 1 22 HELIX 6 AA6 SER G 5 GLY G 39 1 35 HELIX 7 AA7 THR G 48 LEU G 53 5 6 HELIX 8 AA8 MET E 16 LEU E 48 1 33 HELIX 9 AA9 GLY H 64 VAL H 96 1 33 HELIX 10 AB1 VAL H 96 GLN H 118 1 23 HELIX 11 AB2 ALA C 63 VAL C 96 1 34 HELIX 12 AB3 VAL C 96 GLN C 118 1 23 HELIX 13 AB4 LYS J 6 GLY J 39 1 34 HELIX 14 AB5 THR J 48 LEU J 53 5 6 HELIX 15 AB6 THR B 82 CYS B 86 5 5 HELIX 16 AB7 HIS B 87 GLU B 92 1 6 HELIX 17 AB8 PRO B 308 ALA B 310 5 3 HELIX 18 AB9 THR I 82 CYS I 86 5 5 HELIX 19 AC1 HIS I 87 LEU I 93 1 7 HELIX 20 AC2 PRO I 308 ALA I 310 5 3 SHEET 1 AA120 GLY B 100 GLY B 108 0 SHEET 2 AA120 PHE B 113 LEU B 121 -1 O VAL B 115 N LYS B 107 SHEET 3 AA120 ASN B 128 LYS B 139 -1 O HIS B 130 N THR B 118 SHEET 4 AA120 PHE B 147 ASP B 155 -1 O MET B 154 N PHE B 131 SHEET 5 AA120 LEU B 160 GLY B 169 -1 O ASN B 161 N ASP B 153 SHEET 6 AA120 LEU B 172 THR B 180 -1 O SER B 174 N HIS B 166 SHEET 7 AA120 PHE B 185 ARG B 195 -1 O GLU B 193 N ARG B 173 SHEET 8 AA120 PHE B 199 ASP B 209 -1 O ALA B 201 N TYR B 194 SHEET 9 AA120 SER B 214 SER B 224 -1 O ILE B 216 N GLY B 206 SHEET 10 AA120 LEU B 229 ARG B 240 -1 O LEU B 231 N GLN B 223 SHEET 11 AA120 GLU B 243 THR B 255 -1 O LYS B 253 N ALA B 230 SHEET 12 AA120 TRP B 259 GLY B 266 -1 O LEU B 265 N LEU B 250 SHEET 13 AA120 GLY B 269 LYS B 277 -1 O HIS B 271 N THR B 264 SHEET 14 AA120 LEU B 282 SER B 291 -1 O VAL B 286 N TYR B 274 SHEET 15 AA120 ASP B 296 LEU B 307 -1 O GLY B 302 N GLY B 285 SHEET 16 AA120 LEU B 312 ASP B 319 -1 O PHE B 314 N LEU B 305 SHEET 17 AA120 ILE B 323 LYS B 331 -1 O THR B 327 N LYS B 315 SHEET 18 AA120 THR B 338 ASN B 346 -1 O LEU B 345 N VAL B 324 SHEET 19 AA120 LYS B 351 THR B 359 -1 O LYS B 351 N ASN B 346 SHEET 20 AA120 GLY B 100 GLY B 108 1 N THR B 104 O LEU B 358 SHEET 1 AA220 GLY I 100 SER I 110 0 SHEET 2 AA220 PHE I 113 LEU I 121 -1 O LEU I 121 N VAL I 101 SHEET 3 AA220 ASN I 128 GLN I 140 -1 O HIS I 130 N THR I 118 SHEET 4 AA220 ALA I 146 ASP I 155 -1 O MET I 154 N PHE I 131 SHEET 5 AA220 ASN I 161 GLY I 169 -1 O ILE I 165 N VAL I 149 SHEET 6 AA220 LEU I 172 GLN I 181 -1 O SER I 174 N HIS I 166 SHEET 7 AA220 LYS I 184 ARG I 195 -1 O LYS I 184 N GLN I 181 SHEET 8 AA220 PHE I 199 ASP I 209 -1 O ALA I 201 N TYR I 194 SHEET 9 AA220 SER I 214 SER I 224 -1 O ILE I 216 N GLY I 206 SHEET 10 AA220 LEU I 229 ARG I 240 -1 O LEU I 231 N GLN I 223 SHEET 11 AA220 GLU I 243 LEU I 256 -1 O GLU I 243 N ARG I 240 SHEET 12 AA220 TRP I 259 GLY I 266 -1 O LEU I 265 N LEU I 250 SHEET 13 AA220 GLY I 269 LYS I 277 -1 O HIS I 271 N THR I 264 SHEET 14 AA220 LEU I 282 SER I 291 -1 O PHE I 288 N ALA I 272 SHEET 15 AA220 ASP I 296 LEU I 307 -1 O GLY I 302 N GLY I 285 SHEET 16 AA220 LEU I 312 ASP I 319 -1 O PHE I 314 N LEU I 305 SHEET 17 AA220 ILE I 323 LYS I 331 -1 O THR I 327 N LYS I 315 SHEET 18 AA220 LEU I 337 ASN I 346 -1 O LEU I 345 N VAL I 324 SHEET 19 AA220 LYS I 351 ILE I 360 -1 O LYS I 351 N ASN I 346 SHEET 20 AA220 GLY I 100 SER I 110 1 N THR I 104 O ILE I 360 CISPEP 1 PHE B 147 PRO B 148 0 3.10 CISPEP 2 PRO B 333 PRO B 334 0 3.57 CISPEP 3 PHE I 147 PRO I 148 0 1.61 CISPEP 4 PRO I 333 PRO I 334 0 3.45 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000