HEADER DNA BINDING PROTEIN/DNA 08-SEP-21 7VE5 TITLE C-TERMINAL DOMAIN OF VRAR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING RESPONSE REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: R1-DNA; COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: R1-DNA; COMPND 11 CHAIN: D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: BSZ10_05280; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50; SOURCE 10 ORGANISM_TAXID: 158878; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50; SOURCE 14 ORGANISM_TAXID: 158878 KEYWDS TWO-COMPONENT SYSTEM, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.V.KUMAR,C.CHEN,C.H.HSU REVDAT 2 29-NOV-23 7VE5 1 REMARK REVDAT 1 18-MAY-22 7VE5 0 JRNL AUTH J.V.KUMAR,T.S.TSENG,Y.C.LOU,S.Y.WEI,T.H.WU,H.C.TANG, JRNL AUTH 2 Y.C.CHIU,C.H.HSU,C.CHEN JRNL TITL STRUCTURAL INSIGHTS INTO DNA BINDING DOMAIN OF JRNL TITL 2 VANCOMYCIN-RESISTANCE-ASSOCIATED RESPONSE REGULATOR IN JRNL TITL 3 COMPLEX WITH ITS PROMOTER DNA FROM STAPHYLOCOCCUS AUREUS. JRNL REF PROTEIN SCI. V. 31 E4286 2022 JRNL REFN ESSN 1469-896X JRNL PMID 35481641 JRNL DOI 10.1002/PRO.4286 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.3 REMARK 3 NUMBER OF REFLECTIONS : 14139 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1403 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.3100 - 4.2900 0.96 1373 152 0.1862 0.2016 REMARK 3 2 4.2900 - 3.4100 0.93 1326 152 0.1713 0.2288 REMARK 3 3 3.4100 - 2.9800 0.94 1344 149 0.1931 0.2525 REMARK 3 4 2.9800 - 2.7100 0.96 1352 147 0.2118 0.2775 REMARK 3 5 2.7100 - 2.5100 0.95 1358 150 0.2234 0.3001 REMARK 3 6 2.5100 - 2.3700 0.93 1323 150 0.2083 0.3033 REMARK 3 7 2.3700 - 2.2500 0.90 1281 134 0.2090 0.2878 REMARK 3 8 2.2500 - 2.1500 0.86 1217 136 0.1945 0.3006 REMARK 3 9 2.1500 - 2.0700 0.80 1139 127 0.1966 0.3005 REMARK 3 10 2.0700 - 2.0000 0.71 1023 106 0.2105 0.3046 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 394 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VE5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1300023176. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99984 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14143 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 22.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.40200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IF4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CACODYLATE PH 6.6, 10% REMARK 280 PEG 1500 (W/V), 5% PEG 400 (W/V), 200 MM MGCL2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 288.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.17450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.42126 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.17367 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 30.17450 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 17.42126 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 57.17367 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 30.17450 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 17.42126 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.17367 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 34.84251 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 114.34733 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 34.84251 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 114.34733 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 34.84251 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 114.34733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 138 REMARK 465 LYS A 139 REMARK 465 LYS A 140 REMARK 465 ARG A 141 REMARK 465 ALA A 142 REMARK 465 GLN A 209 REMARK 465 MET B 138 REMARK 465 LYS B 139 REMARK 465 LYS B 140 REMARK 465 ARG B 141 REMARK 465 ALA B 142 REMARK 465 GLN B 209 REMARK 465 DA C 20 REMARK 465 DT C 21 REMARK 465 DT C 22 REMARK 465 DA D -2 REMARK 465 DA D -1 REMARK 465 DT D 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 2 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA C 3 O5' - P - OP1 ANGL. DEV. = 9.0 DEGREES REMARK 500 DA C 3 O5' - P - OP2 ANGL. DEV. = -7.8 DEGREES REMARK 500 DA C 3 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC C 4 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT C 12 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DG C 13 O4' - C1' - N9 ANGL. DEV. = 4.1 DEGREES REMARK 500 DG D 4 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT D 5 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT D 9 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC D 11 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 194 OD2 REMARK 620 2 HOH A 415 O 88.7 REMARK 620 3 HOH A 420 O 89.4 83.0 REMARK 620 4 HOH A 424 O 99.3 85.2 165.1 REMARK 620 5 HOH C 205 O 89.9 176.2 100.5 91.5 REMARK 620 6 HOH C 218 O 179.2 91.1 91.2 79.9 90.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 194 OD2 REMARK 620 2 HOH B 412 O 83.9 REMARK 620 3 HOH B 420 O 99.5 92.5 REMARK 620 4 HOH B 425 O 105.4 167.5 94.2 REMARK 620 5 HOH D 201 O 85.4 87.3 175.1 85.2 REMARK 620 6 HOH D 222 O 163.6 84.8 92.8 84.3 82.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 4 OP2 REMARK 620 2 DC C 4 OP1 17.6 REMARK 620 3 HOH C 221 O 92.8 107.1 REMARK 620 4 HOH C 223 O 89.6 75.1 177.2 REMARK 620 5 HOH C 225 O 95.1 103.7 94.5 86.6 REMARK 620 6 HOH C 233 O 164.8 156.5 96.3 81.6 72.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 215 O REMARK 620 2 HOH C 238 O 101.0 REMARK 620 3 HOH D 204 O 68.9 105.0 REMARK 620 4 HOH D 205 O 83.6 175.2 77.8 REMARK 620 5 HOH D 210 O 169.4 85.6 101.5 90.1 REMARK 620 6 HOH D 218 O 102.0 87.7 165.3 90.0 86.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 201 O REMARK 620 2 HOH C 203 O 97.4 REMARK 620 3 HOH C 204 O 175.7 84.3 REMARK 620 4 HOH C 226 O 85.3 97.5 90.5 REMARK 620 5 HOH C 240 O 88.0 77.3 96.2 171.0 REMARK 620 6 HOH D 213 O 79.6 171.3 98.2 74.2 110.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC D 11 OP2 REMARK 620 2 DC D 11 OP1 15.6 REMARK 620 3 HOH D 223 O 106.6 115.4 REMARK 620 4 HOH D 225 O 86.3 98.6 92.3 REMARK 620 5 HOH D 229 O 88.4 79.6 164.9 87.0 REMARK 620 6 HOH D 234 O 170.4 168.3 75.6 84.3 89.3 REMARK 620 N 1 2 3 4 5 DBREF1 7VE5 A 138 209 UNP A0A1Q8DEZ3_STAAU DBREF2 7VE5 A A0A1Q8DEZ3 138 209 DBREF1 7VE5 B 138 209 UNP A0A1Q8DEZ3_STAAU DBREF2 7VE5 B A0A1Q8DEZ3 138 209 DBREF 7VE5 C 1 22 PDB 7VE5 7VE5 1 22 DBREF 7VE5 D -2 19 PDB 7VE5 7VE5 -2 19 SEQRES 1 A 72 MET LYS LYS ARG ALA GLU LEU TYR GLU MET LEU THR GLU SEQRES 2 A 72 ARG GLU MET GLU ILE LEU LEU LEU ILE ALA LYS GLY TYR SEQRES 3 A 72 SER ASN GLN GLU ILE ALA SER ALA SER HIS ILE THR ILE SEQRES 4 A 72 LYS THR VAL LYS THR HIS VAL SER ASN ILE LEU SER LYS SEQRES 5 A 72 LEU GLU VAL GLN ASP ARG THR GLN ALA VAL ILE TYR ALA SEQRES 6 A 72 PHE GLN HIS ASN LEU ILE GLN SEQRES 1 B 72 MET LYS LYS ARG ALA GLU LEU TYR GLU MET LEU THR GLU SEQRES 2 B 72 ARG GLU MET GLU ILE LEU LEU LEU ILE ALA LYS GLY TYR SEQRES 3 B 72 SER ASN GLN GLU ILE ALA SER ALA SER HIS ILE THR ILE SEQRES 4 B 72 LYS THR VAL LYS THR HIS VAL SER ASN ILE LEU SER LYS SEQRES 5 B 72 LEU GLU VAL GLN ASP ARG THR GLN ALA VAL ILE TYR ALA SEQRES 6 B 72 PHE GLN HIS ASN LEU ILE GLN SEQRES 1 C 22 DA DG DA DC DT DA DA DA DG DT DA DT DG SEQRES 2 C 22 DA DA DC DA DT DC DA DT DT SEQRES 1 D 22 DA DA DT DG DA DT DG DT DT DC DA DT DA SEQRES 2 D 22 DC DT DT DT DA DG DT DC DT HET MG A 301 1 HET MG B 301 1 HET MG C 101 1 HET MG C 102 1 HET MG D 101 1 HET MG D 102 1 HETNAM MG MAGNESIUM ION FORMUL 5 MG 6(MG 2+) FORMUL 11 HOH *135(H2 O) HELIX 1 AA1 GLU A 143 LEU A 148 5 6 HELIX 2 AA2 THR A 149 ALA A 160 1 12 HELIX 3 AA3 SER A 164 HIS A 173 1 10 HELIX 4 AA4 THR A 175 LEU A 190 1 16 HELIX 5 AA5 ASP A 194 HIS A 205 1 12 HELIX 6 AA6 GLU B 143 LEU B 148 5 6 HELIX 7 AA7 THR B 149 ALA B 160 1 12 HELIX 8 AA8 SER B 164 HIS B 173 1 10 HELIX 9 AA9 THR B 175 LEU B 190 1 16 HELIX 10 AB1 ASP B 194 HIS B 205 1 12 LINK OD2 ASP A 194 MG MG A 301 1555 1555 1.98 LINK MG MG A 301 O HOH A 415 1555 1555 2.04 LINK MG MG A 301 O HOH A 420 1555 1555 2.13 LINK MG MG A 301 O HOH A 424 1555 1555 2.20 LINK MG MG A 301 O HOH C 205 1555 1555 2.07 LINK MG MG A 301 O HOH C 218 1555 1555 2.19 LINK OD2 ASP B 194 MG MG B 301 1555 1555 2.13 LINK MG MG B 301 O HOH B 412 1555 1555 1.96 LINK MG MG B 301 O HOH B 420 1555 1555 2.00 LINK MG MG B 301 O HOH B 425 1555 1555 2.37 LINK MG MG B 301 O HOH D 201 1555 1555 2.32 LINK MG MG B 301 O HOH D 222 1555 1555 1.91 LINK OP2 DC C 4 MG MG C 101 1555 1555 2.01 LINK OP1 DC C 4 MG MG C 101 1555 3665 2.07 LINK MG MG C 101 O HOH C 221 1555 2655 2.14 LINK MG MG C 101 O HOH C 223 1555 1555 2.24 LINK MG MG C 101 O HOH C 225 1555 1555 2.11 LINK MG MG C 101 O HOH C 233 1555 2655 2.20 LINK MG MG C 102 O HOH C 215 1555 1555 2.07 LINK MG MG C 102 O HOH C 238 1555 1555 2.23 LINK MG MG C 102 O HOH D 204 1555 2655 2.37 LINK MG MG C 102 O HOH D 205 1555 2655 2.29 LINK MG MG C 102 O HOH D 210 1555 2655 2.26 LINK MG MG C 102 O HOH D 218 1555 1555 2.13 LINK O HOH C 201 MG MG D 102 3665 1555 2.21 LINK O HOH C 203 MG MG D 102 3665 1555 2.12 LINK O HOH C 204 MG MG D 102 1555 1555 2.27 LINK O HOH C 226 MG MG D 102 3665 1555 2.21 LINK O HOH C 240 MG MG D 102 3665 1555 2.13 LINK OP2 DC D 11 MG MG D 101 1555 1555 2.10 LINK OP1 DC D 11 MG MG D 101 1555 2655 2.07 LINK MG MG D 101 O HOH D 223 1555 3665 2.31 LINK MG MG D 101 O HOH D 225 1555 1555 2.24 LINK MG MG D 101 O HOH D 229 1555 1555 2.23 LINK MG MG D 101 O HOH D 234 1555 3665 2.24 LINK MG MG D 102 O HOH D 213 1555 1555 1.89 CRYST1 60.349 60.349 171.521 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016570 0.009567 0.000000 0.00000 SCALE2 0.000000 0.019134 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005830 0.00000