HEADER SIGNALING PROTEIN 08-SEP-21 7VED TITLE CRYSTAL STRUCTURE OF GABARAP FUSED TO TEX264 LIR WITH S272D MUTATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TESTIS-EXPRESSED PROTEIN 264,GAMMA-AMINOBUTYRIC ACID COMPND 3 RECEPTOR-ASSOCIATED PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: PUTATIVE SECRETED PROTEIN ZSIG11,GABA(A) RECEPTOR-ASSOCIATED COMPND 6 PROTEIN,MM46; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: GABARAP WITH F3S AND V4T MUTATIONS FUSED TO TEX264 LIR COMPND 10 WITH S272D MUTATION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TEX264, ZSIG11, UNQ337/PRO536, GABARAP, FLC3B, HT004; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AUTOPHAGY, ER-PHAGY, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.YAMASAKI,N.N.NODA REVDAT 3 29-NOV-23 7VED 1 REMARK REVDAT 2 11-OCT-23 7VED 1 JRNL REVDAT 1 30-MAR-22 7VED 0 JRNL AUTH H.CHINO,A.YAMASAKI,K.L.ODE,H.R.UEDA,N.N.NODA,N.MIZUSHIMA JRNL TITL PHOSPHORYLATION BY CASEIN KINASE 2 ENHANCES THE INTERACTION JRNL TITL 2 BETWEEN ER-PHAGY RECEPTOR TEX264 AND ATG8 PROTEINS. JRNL REF EMBO REP. V. 23 54801 2022 JRNL REFN ESSN 1469-3178 JRNL PMID 35417087 JRNL DOI 10.15252/EMBR.202254801 REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 21898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3100 - 4.0400 1.00 2779 147 0.1867 0.2112 REMARK 3 2 4.0400 - 3.2100 1.00 2638 139 0.1570 0.1923 REMARK 3 3 3.2100 - 2.8000 1.00 2635 138 0.1825 0.2295 REMARK 3 4 2.8000 - 2.5500 1.00 2598 137 0.1891 0.2405 REMARK 3 5 2.5500 - 2.3600 1.00 2587 136 0.2063 0.2466 REMARK 3 6 2.3600 - 2.2200 1.00 2580 136 0.2131 0.2580 REMARK 3 7 2.2200 - 2.1100 1.00 2560 135 0.2277 0.2843 REMARK 3 8 2.1100 - 2.0200 0.95 2426 127 0.2714 0.3244 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.023 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2205 REMARK 3 ANGLE : 0.939 2986 REMARK 3 CHIRALITY : 0.066 305 REMARK 3 PLANARITY : 0.006 395 REMARK 3 DIHEDRAL : 13.839 828 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -12 THROUGH 3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1694 7.7577 -21.1788 REMARK 3 T TENSOR REMARK 3 T11: 0.4456 T22: 0.3563 REMARK 3 T33: 0.2581 T12: -0.0008 REMARK 3 T13: 0.0193 T23: -0.0568 REMARK 3 L TENSOR REMARK 3 L11: 1.5003 L22: 7.2802 REMARK 3 L33: 3.8052 L12: -0.1429 REMARK 3 L13: -0.6214 L23: -5.0669 REMARK 3 S TENSOR REMARK 3 S11: -0.2104 S12: 0.3338 S13: -0.0729 REMARK 3 S21: -1.0168 S22: -0.0678 S23: -0.2664 REMARK 3 S31: 0.8058 S32: -0.1656 S33: 0.2888 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1749 -9.2450 -7.3623 REMARK 3 T TENSOR REMARK 3 T11: 0.3313 T22: 0.2806 REMARK 3 T33: 0.3276 T12: -0.0015 REMARK 3 T13: -0.0407 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 4.0148 L22: 2.0144 REMARK 3 L33: 6.4432 L12: 6.3261 REMARK 3 L13: -1.0453 L23: -2.6675 REMARK 3 S TENSOR REMARK 3 S11: 0.0706 S12: 0.1064 S13: -0.2956 REMARK 3 S21: 0.4886 S22: -0.2877 S23: -0.4520 REMARK 3 S31: 0.1730 S32: 0.3155 S33: 0.1899 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6573 -6.2201 -5.0572 REMARK 3 T TENSOR REMARK 3 T11: 0.2807 T22: 0.3599 REMARK 3 T33: 0.3687 T12: -0.0928 REMARK 3 T13: -0.0350 T23: -0.0477 REMARK 3 L TENSOR REMARK 3 L11: 9.7239 L22: 8.9641 REMARK 3 L33: 6.0019 L12: -8.1896 REMARK 3 L13: -7.5415 L23: 7.1199 REMARK 3 S TENSOR REMARK 3 S11: -0.0381 S12: 0.2190 S13: -0.3972 REMARK 3 S21: 0.2351 S22: -0.3518 S23: 0.6545 REMARK 3 S31: 0.1700 S32: -0.2664 S33: 0.5324 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6709 1.9791 1.5147 REMARK 3 T TENSOR REMARK 3 T11: 0.2800 T22: 0.2346 REMARK 3 T33: 0.2372 T12: 0.0212 REMARK 3 T13: -0.0353 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 5.8384 L22: 3.4218 REMARK 3 L33: 4.0858 L12: 1.3933 REMARK 3 L13: -1.6304 L23: 0.8865 REMARK 3 S TENSOR REMARK 3 S11: -0.2130 S12: -0.3088 S13: -0.3300 REMARK 3 S21: 0.0857 S22: 0.0600 S23: -0.1167 REMARK 3 S31: 0.2463 S32: 0.1144 S33: 0.2476 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7931 9.1121 6.6711 REMARK 3 T TENSOR REMARK 3 T11: 0.2119 T22: 0.2476 REMARK 3 T33: 0.2365 T12: 0.0029 REMARK 3 T13: 0.0192 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 9.7959 L22: 7.2288 REMARK 3 L33: 6.6104 L12: -5.8694 REMARK 3 L13: 4.7354 L23: 0.0716 REMARK 3 S TENSOR REMARK 3 S11: 0.1375 S12: 0.0446 S13: -0.5118 REMARK 3 S21: -0.0281 S22: -0.0087 S23: 0.0259 REMARK 3 S31: 0.0594 S32: 0.3901 S33: -0.1019 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8305 10.6098 -0.4542 REMARK 3 T TENSOR REMARK 3 T11: 0.2621 T22: 0.1534 REMARK 3 T33: 0.2225 T12: -0.0283 REMARK 3 T13: -0.0140 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 8.4533 L22: 3.7186 REMARK 3 L33: 4.7738 L12: -0.4585 REMARK 3 L13: -0.3248 L23: 2.3648 REMARK 3 S TENSOR REMARK 3 S11: 0.1895 S12: -0.0337 S13: -0.1851 REMARK 3 S21: -0.0875 S22: 0.1299 S23: -0.3546 REMARK 3 S31: -0.0899 S32: 0.2544 S33: -0.3253 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5419 9.6791 -5.0835 REMARK 3 T TENSOR REMARK 3 T11: 0.3741 T22: 0.3774 REMARK 3 T33: 0.3517 T12: -0.0004 REMARK 3 T13: -0.0783 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 8.1580 L22: 3.8458 REMARK 3 L33: 3.8043 L12: 4.1565 REMARK 3 L13: 3.9311 L23: 3.8223 REMARK 3 S TENSOR REMARK 3 S11: -0.0847 S12: 0.2394 S13: 0.8882 REMARK 3 S21: -0.5785 S22: -0.4866 S23: 0.5840 REMARK 3 S31: -0.6599 S32: -0.4715 S33: 0.7295 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5386 1.2793 -6.6234 REMARK 3 T TENSOR REMARK 3 T11: 0.3309 T22: 0.3063 REMARK 3 T33: 0.2825 T12: 0.0201 REMARK 3 T13: -0.0181 T23: -0.0631 REMARK 3 L TENSOR REMARK 3 L11: 4.0186 L22: 5.4016 REMARK 3 L33: 3.9516 L12: 4.6837 REMARK 3 L13: 1.8767 L23: 1.7749 REMARK 3 S TENSOR REMARK 3 S11: -0.1169 S12: 0.6449 S13: -0.2928 REMARK 3 S21: -0.2997 S22: 0.0975 S23: 0.1989 REMARK 3 S31: 0.0858 S32: -0.1526 S33: -0.0208 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.6075 7.7257 -8.0534 REMARK 3 T TENSOR REMARK 3 T11: 0.3831 T22: 0.4759 REMARK 3 T33: 0.4532 T12: -0.0810 REMARK 3 T13: 0.0305 T23: -0.0492 REMARK 3 L TENSOR REMARK 3 L11: 8.0141 L22: 6.8203 REMARK 3 L33: 2.1362 L12: 2.4928 REMARK 3 L13: 2.1260 L23: 3.2504 REMARK 3 S TENSOR REMARK 3 S11: 0.0449 S12: 0.3964 S13: 0.1155 REMARK 3 S21: -0.3583 S22: 0.0033 S23: -0.2700 REMARK 3 S31: 0.0186 S32: 1.5319 S33: 0.0146 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -12 THROUGH 3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1908 -0.4894 -36.6968 REMARK 3 T TENSOR REMARK 3 T11: 0.6952 T22: 0.4830 REMARK 3 T33: 0.4162 T12: 0.0643 REMARK 3 T13: -0.0103 T23: -0.0941 REMARK 3 L TENSOR REMARK 3 L11: 1.9118 L22: 5.6043 REMARK 3 L33: 8.8112 L12: -3.1102 REMARK 3 L13: 3.8338 L23: -7.0248 REMARK 3 S TENSOR REMARK 3 S11: -0.1154 S12: 0.1486 S13: 0.0096 REMARK 3 S21: 1.1954 S22: 0.4797 S23: 0.2902 REMARK 3 S31: -2.2610 S32: -0.7467 S33: -0.2751 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8865 -17.4401 -17.0882 REMARK 3 T TENSOR REMARK 3 T11: 0.3212 T22: 0.2450 REMARK 3 T33: 0.2184 T12: -0.0308 REMARK 3 T13: -0.0456 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 7.1212 L22: 7.3667 REMARK 3 L33: 7.4629 L12: -4.1795 REMARK 3 L13: -0.9693 L23: 3.5240 REMARK 3 S TENSOR REMARK 3 S11: -0.0191 S12: -0.2817 S13: 0.2994 REMARK 3 S21: 0.6856 S22: 0.1715 S23: -0.3587 REMARK 3 S31: 0.2582 S32: 0.2110 S33: -0.1151 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3083 -21.4206 -28.8058 REMARK 3 T TENSOR REMARK 3 T11: 0.2050 T22: 0.2081 REMARK 3 T33: 0.1597 T12: -0.0360 REMARK 3 T13: 0.0280 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 7.4307 L22: 6.4619 REMARK 3 L33: 6.5619 L12: -4.2722 REMARK 3 L13: 1.7186 L23: -0.9076 REMARK 3 S TENSOR REMARK 3 S11: -0.0711 S12: -0.1865 S13: -0.1064 REMARK 3 S21: 0.2352 S22: 0.1654 S23: 0.0616 REMARK 3 S31: 0.0956 S32: -0.2464 S33: -0.0733 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6424 -18.6857 -37.3604 REMARK 3 T TENSOR REMARK 3 T11: 0.2407 T22: 0.2350 REMARK 3 T33: 0.1648 T12: 0.0107 REMARK 3 T13: 0.0000 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 6.3334 L22: 7.4390 REMARK 3 L33: 5.1074 L12: 0.8919 REMARK 3 L13: 1.7862 L23: 0.7510 REMARK 3 S TENSOR REMARK 3 S11: -0.0496 S12: -0.1732 S13: 0.0158 REMARK 3 S21: -0.2364 S22: 0.0265 S23: 0.5035 REMARK 3 S31: 0.1591 S32: -0.3633 S33: 0.0253 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1942 -14.8517 -33.5119 REMARK 3 T TENSOR REMARK 3 T11: 0.3095 T22: 0.3270 REMARK 3 T33: 0.4004 T12: -0.0443 REMARK 3 T13: 0.0494 T23: 0.0448 REMARK 3 L TENSOR REMARK 3 L11: 8.9528 L22: 9.8064 REMARK 3 L33: 4.9294 L12: -1.8277 REMARK 3 L13: -0.2272 L23: 6.8796 REMARK 3 S TENSOR REMARK 3 S11: 0.2834 S12: 0.4199 S13: 0.8070 REMARK 3 S21: -0.6994 S22: 0.1189 S23: -1.2007 REMARK 3 S31: -0.7472 S32: 0.4054 S33: -0.3145 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9265 -12.6081 -28.9704 REMARK 3 T TENSOR REMARK 3 T11: 0.2357 T22: 0.2220 REMARK 3 T33: 0.2143 T12: -0.0122 REMARK 3 T13: 0.0343 T23: -0.0624 REMARK 3 L TENSOR REMARK 3 L11: 3.3040 L22: 3.1277 REMARK 3 L33: 8.2289 L12: -2.3072 REMARK 3 L13: 3.8365 L23: -2.0727 REMARK 3 S TENSOR REMARK 3 S11: -0.0777 S12: -0.3960 S13: -0.0296 REMARK 3 S21: 0.0070 S22: 0.1067 S23: -0.0041 REMARK 3 S31: -0.4176 S32: -0.3129 S33: 0.0532 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID -12 THROUGH -11 OR REMARK 3 (RESID -10 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID -9 REMARK 3 THROUGH -1 OR (RESID 0 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 1 THROUGH 14 OR RESID 16 THROUGH REMARK 3 27 OR RESID 29 THROUGH 80 OR RESID 82 REMARK 3 THROUGH 116 OR RESID 131)) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID -12 THROUGH 14 OR REMARK 3 RESID 16 THROUGH 27 OR RESID 29 THROUGH REMARK 3 44 OR (RESID 45 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 46 THROUGH 80 OR RESID 82 THROUGH 116 OR REMARK 3 RESID 131)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VED COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1300024570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21898 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 41.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1GNU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM SODIUM TARTRATE, 0.1M REMARK 280 SODIUM CITRATE PH 5.6, 2.0M AMMONIUM SULFATE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.18200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.21700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.31400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.21700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.18200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.31400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 LYS A 20 CG CD CE NZ REMARK 470 LYS A 23 CG CD CE NZ REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 ASP A 45 CG OD1 OD2 REMARK 470 SER B -10 OG REMARK 470 GLU B 0 CG CD OE1 OE2 REMARK 470 LYS B 2 CG CD CE NZ REMARK 470 LYS B 20 CG CD CE NZ REMARK 470 LYS B 23 CG CD CE NZ REMARK 470 LYS B 24 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 97 O HOH B 301 1.95 REMARK 500 O HOH B 343 O HOH B 355 2.11 REMARK 500 O HOH A 377 O HOH A 388 2.16 REMARK 500 O HOH A 383 O HOH A 386 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 38 -2.76 72.44 REMARK 500 REMARK 500 REMARK: NULL DBREF 7VED A -10 0 UNP Q9Y6I9 TX264_HUMAN 271 281 DBREF 7VED A 1 116 UNP O95166 GBRAP_HUMAN 1 116 DBREF 7VED B -10 0 UNP Q9Y6I9 TX264_HUMAN 271 281 DBREF 7VED B 1 116 UNP O95166 GBRAP_HUMAN 1 116 SEQADV 7VED GLY A -12 UNP Q9Y6I9 EXPRESSION TAG SEQADV 7VED PRO A -11 UNP Q9Y6I9 EXPRESSION TAG SEQADV 7VED ASP A -9 UNP Q9Y6I9 SER 272 ENGINEERED MUTATION SEQADV 7VED ASP A -2 UNP Q9Y6I9 GLU 279 CONFLICT SEQADV 7VED SER A 3 UNP O95166 PHE 3 ENGINEERED MUTATION SEQADV 7VED THR A 4 UNP O95166 VAL 4 ENGINEERED MUTATION SEQADV 7VED GLY B -12 UNP Q9Y6I9 EXPRESSION TAG SEQADV 7VED PRO B -11 UNP Q9Y6I9 EXPRESSION TAG SEQADV 7VED ASP B -9 UNP Q9Y6I9 SER 272 ENGINEERED MUTATION SEQADV 7VED ASP B -2 UNP Q9Y6I9 GLU 279 CONFLICT SEQADV 7VED SER B 3 UNP O95166 PHE 3 ENGINEERED MUTATION SEQADV 7VED THR B 4 UNP O95166 VAL 4 ENGINEERED MUTATION SEQRES 1 A 129 GLY PRO SER ASP PHE GLU GLU LEU ASP LEU ASP GLY GLU SEQRES 2 A 129 MET LYS SER THR TYR LYS GLU GLU HIS PRO PHE GLU LYS SEQRES 3 A 129 ARG ARG SER GLU GLY GLU LYS ILE ARG LYS LYS TYR PRO SEQRES 4 A 129 ASP ARG VAL PRO VAL ILE VAL GLU LYS ALA PRO LYS ALA SEQRES 5 A 129 ARG ILE GLY ASP LEU ASP LYS LYS LYS TYR LEU VAL PRO SEQRES 6 A 129 SER ASP LEU THR VAL GLY GLN PHE TYR PHE LEU ILE ARG SEQRES 7 A 129 LYS ARG ILE HIS LEU ARG ALA GLU ASP ALA LEU PHE PHE SEQRES 8 A 129 PHE VAL ASN ASN VAL ILE PRO PRO THR SER ALA THR MET SEQRES 9 A 129 GLY GLN LEU TYR GLN GLU HIS HIS GLU GLU ASP PHE PHE SEQRES 10 A 129 LEU TYR ILE ALA TYR SER ASP GLU SER VAL TYR GLY SEQRES 1 B 129 GLY PRO SER ASP PHE GLU GLU LEU ASP LEU ASP GLY GLU SEQRES 2 B 129 MET LYS SER THR TYR LYS GLU GLU HIS PRO PHE GLU LYS SEQRES 3 B 129 ARG ARG SER GLU GLY GLU LYS ILE ARG LYS LYS TYR PRO SEQRES 4 B 129 ASP ARG VAL PRO VAL ILE VAL GLU LYS ALA PRO LYS ALA SEQRES 5 B 129 ARG ILE GLY ASP LEU ASP LYS LYS LYS TYR LEU VAL PRO SEQRES 6 B 129 SER ASP LEU THR VAL GLY GLN PHE TYR PHE LEU ILE ARG SEQRES 7 B 129 LYS ARG ILE HIS LEU ARG ALA GLU ASP ALA LEU PHE PHE SEQRES 8 B 129 PHE VAL ASN ASN VAL ILE PRO PRO THR SER ALA THR MET SEQRES 9 B 129 GLY GLN LEU TYR GLN GLU HIS HIS GLU GLU ASP PHE PHE SEQRES 10 B 129 LEU TYR ILE ALA TYR SER ASP GLU SER VAL TYR GLY HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 B 201 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *150(H2 O) HELIX 1 AA1 GLY A -12 PHE A -8 5 5 HELIX 2 AA2 SER A 3 HIS A 9 1 7 HELIX 3 AA3 PRO A 10 TYR A 25 1 16 HELIX 4 AA4 THR A 56 HIS A 69 1 14 HELIX 5 AA5 THR A 90 HIS A 99 1 10 HELIX 6 AA6 GLY B -12 PHE B -8 5 5 HELIX 7 AA7 SER B 3 HIS B 9 1 7 HELIX 8 AA8 PRO B 10 TYR B 25 1 16 HELIX 9 AA9 THR B 56 HIS B 69 1 14 HELIX 10 AB1 THR B 90 HIS B 99 1 10 HELIX 11 AB2 ASP B 111 GLY B 116 5 6 SHEET 1 AA1 4 LYS A 48 PRO A 52 0 SHEET 2 AA1 4 ARG A 28 LYS A 35 -1 N VAL A 31 O TYR A 49 SHEET 3 AA1 4 LEU A 105 SER A 110 1 O ILE A 107 N ILE A 32 SHEET 4 AA1 4 PHE A 77 PHE A 79 -1 N PHE A 77 O SER A 110 SHEET 1 AA2 4 LYS B 48 PRO B 52 0 SHEET 2 AA2 4 ARG B 28 LYS B 35 -1 N VAL B 31 O TYR B 49 SHEET 3 AA2 4 LEU B 105 SER B 110 1 O LEU B 105 N ILE B 32 SHEET 4 AA2 4 PHE B 77 PHE B 79 -1 N PHE B 79 O ALA B 108 CRYST1 38.364 82.628 102.434 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026066 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012102 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009762 0.00000