data_7VEX # _entry.id 7VEX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7VEX pdb_00007vex 10.2210/pdb7vex/pdb WWPDB D_1300024550 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7VEX _pdbx_database_status.recvd_initial_deposition_date 2021-09-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Saijo-Hamano, Y.' 1 0000-0001-5301-6696 'Sakai, N.' 2 0000-0001-8544-1187 'Nitta, R.' 3 0000-0002-6537-9272 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Life Sci Alliance' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2575-1077 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 5 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural basis of membrane recognition of Toxoplasma gondii vacuole by Irgb6.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.26508/lsa.202101149 _citation.pdbx_database_id_PubMed 34753804 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Saijo-Hamano, Y.' 1 0000-0001-5301-6696 primary 'Sherif, A.A.' 2 ? primary 'Pradipta, A.' 3 ? primary 'Sasai, M.' 4 ? primary 'Sakai, N.' 5 0000-0001-8544-1187 primary 'Sakihama, Y.' 6 ? primary 'Yamamoto, M.' 7 0000-0002-6821-2785 primary 'Standley, D.M.' 8 0000-0003-4078-0817 primary 'Nitta, R.' 9 0000-0002-6537-9272 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7VEX _cell.details ? _cell.formula_units_Z ? _cell.length_a 69.618 _cell.length_a_esd ? _cell.length_b 75.743 _cell.length_b_esd ? _cell.length_c 80.620 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VEX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'T-cell-specific guanine nucleotide triphosphate-binding protein 2' 47330.719 1 3.6.5.- ? ? ? 2 non-polymer syn "GUANOSINE-5'-TRIPHOSPHATE" 523.180 1 ? ? ? ? 3 water nat water 18.015 303 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Interferon-gamma-inducible GTPase Ifggb6 protein,T-cell-specific guanine nucleotide triphosphate-binding protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPMAWASSFDAFFKNFKRESKIISEYDITLIMTYIEENKLQKAVSVIEKVLRDIESAPLHIAVTGETGAGKSTFINTLRG VGHEEKGAAPTGAIETTMKRTPYPHPKLPNVTIWDLPGIGTTNFTPQNYLTEMKFGEYDFFIIISATRFKENDAQLAKAI AQMGMNFYFVRTKIDSDLDNEQKFKPKSFNKEEVLKNIKDYCSNHLQESLDSEPPVFLVSNVDISKYDFPKLETKLLQDL PAHKRHVFSLSLQSLTEATINYKRDSLKQKVFLEAMKAGALATIPLGGMISDILENLDETFNLYRSYFGLDDASLENIAQ DLNMSVDDFKVHLRFPHLFAEHNDESLEDKLFKYIKHISSVTGGPVAAVTYYRMAYYLQNLFLDTAANDAIALLNSKALF EKKVGPYISEPPEYWEA ; _entity_poly.pdbx_seq_one_letter_code_can ;GPMAWASSFDAFFKNFKRESKIISEYDITLIMTYIEENKLQKAVSVIEKVLRDIESAPLHIAVTGETGAGKSTFINTLRG VGHEEKGAAPTGAIETTMKRTPYPHPKLPNVTIWDLPGIGTTNFTPQNYLTEMKFGEYDFFIIISATRFKENDAQLAKAI AQMGMNFYFVRTKIDSDLDNEQKFKPKSFNKEEVLKNIKDYCSNHLQESLDSEPPVFLVSNVDISKYDFPKLETKLLQDL PAHKRHVFSLSLQSLTEATINYKRDSLKQKVFLEAMKAGALATIPLGGMISDILENLDETFNLYRSYFGLDDASLENIAQ DLNMSVDDFKVHLRFPHLFAEHNDESLEDKLFKYIKHISSVTGGPVAAVTYYRMAYYLQNLFLDTAANDAIALLNSKALF EKKVGPYISEPPEYWEA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 MET n 1 4 ALA n 1 5 TRP n 1 6 ALA n 1 7 SER n 1 8 SER n 1 9 PHE n 1 10 ASP n 1 11 ALA n 1 12 PHE n 1 13 PHE n 1 14 LYS n 1 15 ASN n 1 16 PHE n 1 17 LYS n 1 18 ARG n 1 19 GLU n 1 20 SER n 1 21 LYS n 1 22 ILE n 1 23 ILE n 1 24 SER n 1 25 GLU n 1 26 TYR n 1 27 ASP n 1 28 ILE n 1 29 THR n 1 30 LEU n 1 31 ILE n 1 32 MET n 1 33 THR n 1 34 TYR n 1 35 ILE n 1 36 GLU n 1 37 GLU n 1 38 ASN n 1 39 LYS n 1 40 LEU n 1 41 GLN n 1 42 LYS n 1 43 ALA n 1 44 VAL n 1 45 SER n 1 46 VAL n 1 47 ILE n 1 48 GLU n 1 49 LYS n 1 50 VAL n 1 51 LEU n 1 52 ARG n 1 53 ASP n 1 54 ILE n 1 55 GLU n 1 56 SER n 1 57 ALA n 1 58 PRO n 1 59 LEU n 1 60 HIS n 1 61 ILE n 1 62 ALA n 1 63 VAL n 1 64 THR n 1 65 GLY n 1 66 GLU n 1 67 THR n 1 68 GLY n 1 69 ALA n 1 70 GLY n 1 71 LYS n 1 72 SER n 1 73 THR n 1 74 PHE n 1 75 ILE n 1 76 ASN n 1 77 THR n 1 78 LEU n 1 79 ARG n 1 80 GLY n 1 81 VAL n 1 82 GLY n 1 83 HIS n 1 84 GLU n 1 85 GLU n 1 86 LYS n 1 87 GLY n 1 88 ALA n 1 89 ALA n 1 90 PRO n 1 91 THR n 1 92 GLY n 1 93 ALA n 1 94 ILE n 1 95 GLU n 1 96 THR n 1 97 THR n 1 98 MET n 1 99 LYS n 1 100 ARG n 1 101 THR n 1 102 PRO n 1 103 TYR n 1 104 PRO n 1 105 HIS n 1 106 PRO n 1 107 LYS n 1 108 LEU n 1 109 PRO n 1 110 ASN n 1 111 VAL n 1 112 THR n 1 113 ILE n 1 114 TRP n 1 115 ASP n 1 116 LEU n 1 117 PRO n 1 118 GLY n 1 119 ILE n 1 120 GLY n 1 121 THR n 1 122 THR n 1 123 ASN n 1 124 PHE n 1 125 THR n 1 126 PRO n 1 127 GLN n 1 128 ASN n 1 129 TYR n 1 130 LEU n 1 131 THR n 1 132 GLU n 1 133 MET n 1 134 LYS n 1 135 PHE n 1 136 GLY n 1 137 GLU n 1 138 TYR n 1 139 ASP n 1 140 PHE n 1 141 PHE n 1 142 ILE n 1 143 ILE n 1 144 ILE n 1 145 SER n 1 146 ALA n 1 147 THR n 1 148 ARG n 1 149 PHE n 1 150 LYS n 1 151 GLU n 1 152 ASN n 1 153 ASP n 1 154 ALA n 1 155 GLN n 1 156 LEU n 1 157 ALA n 1 158 LYS n 1 159 ALA n 1 160 ILE n 1 161 ALA n 1 162 GLN n 1 163 MET n 1 164 GLY n 1 165 MET n 1 166 ASN n 1 167 PHE n 1 168 TYR n 1 169 PHE n 1 170 VAL n 1 171 ARG n 1 172 THR n 1 173 LYS n 1 174 ILE n 1 175 ASP n 1 176 SER n 1 177 ASP n 1 178 LEU n 1 179 ASP n 1 180 ASN n 1 181 GLU n 1 182 GLN n 1 183 LYS n 1 184 PHE n 1 185 LYS n 1 186 PRO n 1 187 LYS n 1 188 SER n 1 189 PHE n 1 190 ASN n 1 191 LYS n 1 192 GLU n 1 193 GLU n 1 194 VAL n 1 195 LEU n 1 196 LYS n 1 197 ASN n 1 198 ILE n 1 199 LYS n 1 200 ASP n 1 201 TYR n 1 202 CYS n 1 203 SER n 1 204 ASN n 1 205 HIS n 1 206 LEU n 1 207 GLN n 1 208 GLU n 1 209 SER n 1 210 LEU n 1 211 ASP n 1 212 SER n 1 213 GLU n 1 214 PRO n 1 215 PRO n 1 216 VAL n 1 217 PHE n 1 218 LEU n 1 219 VAL n 1 220 SER n 1 221 ASN n 1 222 VAL n 1 223 ASP n 1 224 ILE n 1 225 SER n 1 226 LYS n 1 227 TYR n 1 228 ASP n 1 229 PHE n 1 230 PRO n 1 231 LYS n 1 232 LEU n 1 233 GLU n 1 234 THR n 1 235 LYS n 1 236 LEU n 1 237 LEU n 1 238 GLN n 1 239 ASP n 1 240 LEU n 1 241 PRO n 1 242 ALA n 1 243 HIS n 1 244 LYS n 1 245 ARG n 1 246 HIS n 1 247 VAL n 1 248 PHE n 1 249 SER n 1 250 LEU n 1 251 SER n 1 252 LEU n 1 253 GLN n 1 254 SER n 1 255 LEU n 1 256 THR n 1 257 GLU n 1 258 ALA n 1 259 THR n 1 260 ILE n 1 261 ASN n 1 262 TYR n 1 263 LYS n 1 264 ARG n 1 265 ASP n 1 266 SER n 1 267 LEU n 1 268 LYS n 1 269 GLN n 1 270 LYS n 1 271 VAL n 1 272 PHE n 1 273 LEU n 1 274 GLU n 1 275 ALA n 1 276 MET n 1 277 LYS n 1 278 ALA n 1 279 GLY n 1 280 ALA n 1 281 LEU n 1 282 ALA n 1 283 THR n 1 284 ILE n 1 285 PRO n 1 286 LEU n 1 287 GLY n 1 288 GLY n 1 289 MET n 1 290 ILE n 1 291 SER n 1 292 ASP n 1 293 ILE n 1 294 LEU n 1 295 GLU n 1 296 ASN n 1 297 LEU n 1 298 ASP n 1 299 GLU n 1 300 THR n 1 301 PHE n 1 302 ASN n 1 303 LEU n 1 304 TYR n 1 305 ARG n 1 306 SER n 1 307 TYR n 1 308 PHE n 1 309 GLY n 1 310 LEU n 1 311 ASP n 1 312 ASP n 1 313 ALA n 1 314 SER n 1 315 LEU n 1 316 GLU n 1 317 ASN n 1 318 ILE n 1 319 ALA n 1 320 GLN n 1 321 ASP n 1 322 LEU n 1 323 ASN n 1 324 MET n 1 325 SER n 1 326 VAL n 1 327 ASP n 1 328 ASP n 1 329 PHE n 1 330 LYS n 1 331 VAL n 1 332 HIS n 1 333 LEU n 1 334 ARG n 1 335 PHE n 1 336 PRO n 1 337 HIS n 1 338 LEU n 1 339 PHE n 1 340 ALA n 1 341 GLU n 1 342 HIS n 1 343 ASN n 1 344 ASP n 1 345 GLU n 1 346 SER n 1 347 LEU n 1 348 GLU n 1 349 ASP n 1 350 LYS n 1 351 LEU n 1 352 PHE n 1 353 LYS n 1 354 TYR n 1 355 ILE n 1 356 LYS n 1 357 HIS n 1 358 ILE n 1 359 SER n 1 360 SER n 1 361 VAL n 1 362 THR n 1 363 GLY n 1 364 GLY n 1 365 PRO n 1 366 VAL n 1 367 ALA n 1 368 ALA n 1 369 VAL n 1 370 THR n 1 371 TYR n 1 372 TYR n 1 373 ARG n 1 374 MET n 1 375 ALA n 1 376 TYR n 1 377 TYR n 1 378 LEU n 1 379 GLN n 1 380 ASN n 1 381 LEU n 1 382 PHE n 1 383 LEU n 1 384 ASP n 1 385 THR n 1 386 ALA n 1 387 ALA n 1 388 ASN n 1 389 ASP n 1 390 ALA n 1 391 ILE n 1 392 ALA n 1 393 LEU n 1 394 LEU n 1 395 ASN n 1 396 SER n 1 397 LYS n 1 398 ALA n 1 399 LEU n 1 400 PHE n 1 401 GLU n 1 402 LYS n 1 403 LYS n 1 404 VAL n 1 405 GLY n 1 406 PRO n 1 407 TYR n 1 408 ILE n 1 409 SER n 1 410 GLU n 1 411 PRO n 1 412 PRO n 1 413 GLU n 1 414 TYR n 1 415 TRP n 1 416 GLU n 1 417 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 417 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Tgtp2, Ifggb6, Irgb6, Mg21, Tgtp' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TGTP2_MOUSE _struct_ref.pdbx_db_accession Q3T9E4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAWASSFDAFFKNFKRESKIISEYDITLIMTYIEENKLQKAVSVIEKVLRDIESAPLHIAVTGETGAGKSTFINTLRGVG HEEKGAAPTGAIETTMKRTPYPHPKLPNVTIWDLPGIGTTNFTPQNYLTEMKFGEYDFFIIISATRFKENDAQLAKAIAQ MGMNFYFVRTKIDSDLDNEQKFKPKSFNKEEVLKNIKDYCSNHLQESLDSEPPVFLVSNVDISKYDFPKLETKLLQDLPA HKRHVFSLSLQSLTEATINYKRDSLKQKVFLEAMKAGALATIPLGGMISDILENLDETFNLYRSYFGLDDASLENIAQDL NMSVDDFKVHLRFPHLFAEHNDESLEDKLFKYIKHISSVTGGPVAAVTYYRMAYYLQNLFLDTAANDAIALLNSKALFEK KVGPYISEPPEYWEA ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7VEX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 417 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q3T9E4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 415 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 415 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7VEX GLY A 1 ? UNP Q3T9E4 ? ? 'expression tag' -1 1 1 7VEX PRO A 2 ? UNP Q3T9E4 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7VEX _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Sodium Citrate, Polyethylene Glycol 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-06-05 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7VEX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.51 _reflns.d_resolution_low 43.29 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 129901 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.99 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.07 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.51 _reflns_shell.d_res_low 1.60 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 20925 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.524 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 0.74 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] -0.80 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] 0.07 _refine.B_iso_max ? _refine.B_iso_mean 33.227 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.978 _refine.correlation_coeff_Fo_to_Fc_free 0.961 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7VEX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.51 _refine.ls_d_res_low 43.29 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 65855 _refine.ls_number_reflns_R_free 1997 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.94 _refine.ls_percent_reflns_R_free 2.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.14831 _refine.ls_R_factor_R_free 0.19687 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.14686 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model '1TQD, 1TPZ, 1TQ2' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.074 _refine.pdbx_overall_ESU_R_Free 0.071 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.194 _refine.overall_SU_ML 0.051 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 1.51 _refine_hist.d_res_low 43.29 _refine_hist.number_atoms_solvent 303 _refine_hist.number_atoms_total 3639 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 3304 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 0.013 3436 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 3222 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.768 1.645 4661 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.468 1.580 7461 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.673 5.000 414 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.143 23.964 169 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.010 15.000 602 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 23.322 15.000 11 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.090 0.200 453 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 3825 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 761 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 5.683 3.140 1650 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 5.656 3.137 1649 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 6.990 4.706 2060 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 6.989 4.709 2061 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 6.727 3.658 1786 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 6.727 3.658 1784 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 8.050 5.267 2600 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 8.115 37.856 3955 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 8.033 37.463 3878 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 4.468 3.000 6658 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.51 _refine_ls_shell.d_res_low 1.55 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 142 _refine_ls_shell.number_reflns_R_work 4817 _refine_ls_shell.percent_reflns_obs 99.48 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.458 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.477 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7VEX _struct.title 'Crystal Structure of GTP-bound Irgb6' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7VEX _struct_keywords.text 'Irgb6, IRGs, immunity-related GTPase, (IFN)-inducible GTPase, p47 GTPase, tgtp, dynamin superfamily, IMMUNE SYSTEM, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 1 ? ASN A 15 ? GLY A -1 ASN A 13 1 ? 15 HELX_P HELX_P2 AA2 PHE A 16 ? LYS A 21 ? PHE A 14 LYS A 19 5 ? 6 HELX_P HELX_P3 AA3 SER A 24 ? GLU A 37 ? SER A 22 GLU A 35 1 ? 14 HELX_P HELX_P4 AA4 LYS A 39 ? ALA A 57 ? LYS A 37 ALA A 55 1 ? 19 HELX_P HELX_P5 AA5 GLY A 70 ? GLY A 80 ? GLY A 68 GLY A 78 1 ? 11 HELX_P HELX_P6 AA6 ILE A 119 ? THR A 122 ? ILE A 117 THR A 120 5 ? 4 HELX_P HELX_P7 AA7 THR A 125 ? MET A 133 ? THR A 123 MET A 131 1 ? 9 HELX_P HELX_P8 AA8 LYS A 134 ? TYR A 138 ? LYS A 132 TYR A 136 5 ? 5 HELX_P HELX_P9 AA9 LYS A 150 ? MET A 163 ? LYS A 148 MET A 161 1 ? 14 HELX_P HELX_P10 AB1 LYS A 173 ? LYS A 185 ? LYS A 171 LYS A 183 1 ? 13 HELX_P HELX_P11 AB2 ASN A 190 ? GLU A 208 ? ASN A 188 GLU A 206 1 ? 19 HELX_P HELX_P12 AB3 ASP A 228 ? LEU A 240 ? ASP A 226 LEU A 238 1 ? 13 HELX_P HELX_P13 AB4 PRO A 241 ? HIS A 243 ? PRO A 239 HIS A 241 5 ? 3 HELX_P HELX_P14 AB5 LYS A 244 ? LEU A 252 ? LYS A 242 LEU A 250 1 ? 9 HELX_P HELX_P15 AB6 THR A 256 ? GLY A 279 ? THR A 254 GLY A 277 1 ? 24 HELX_P HELX_P16 AB7 MET A 289 ? LEU A 297 ? MET A 287 LEU A 295 1 ? 9 HELX_P HELX_P17 AB8 LEU A 297 ? PHE A 308 ? LEU A 295 PHE A 306 1 ? 12 HELX_P HELX_P18 AB9 ASP A 311 ? LEU A 322 ? ASP A 309 LEU A 320 1 ? 12 HELX_P HELX_P19 AC1 SER A 325 ? VAL A 331 ? SER A 323 VAL A 329 1 ? 7 HELX_P HELX_P20 AC2 HIS A 332 ? LEU A 333 ? HIS A 330 LEU A 331 5 ? 2 HELX_P HELX_P21 AC3 ARG A 334 ? LEU A 338 ? ARG A 332 LEU A 336 5 ? 5 HELX_P HELX_P22 AC4 SER A 346 ? THR A 362 ? SER A 344 THR A 360 1 ? 17 HELX_P HELX_P23 AC5 ARG A 373 ? LEU A 394 ? ARG A 371 LEU A 392 1 ? 22 HELX_P HELX_P24 AC6 ASN A 395 ? LYS A 402 ? ASN A 393 LYS A 400 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 101 ? PRO A 104 ? THR A 99 PRO A 102 AA1 2 VAL A 111 ? PRO A 117 ? VAL A 109 PRO A 115 AA1 3 LEU A 59 ? GLY A 65 ? LEU A 57 GLY A 63 AA1 4 PHE A 140 ? SER A 145 ? PHE A 138 SER A 143 AA1 5 PHE A 167 ? ARG A 171 ? PHE A 165 ARG A 169 AA1 6 VAL A 216 ? LEU A 218 ? VAL A 214 LEU A 216 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 101 ? N THR A 99 O ASP A 115 ? O ASP A 113 AA1 2 3 O TRP A 114 ? O TRP A 112 N ILE A 61 ? N ILE A 59 AA1 3 4 N ALA A 62 ? N ALA A 60 O ILE A 142 ? O ILE A 140 AA1 4 5 N ILE A 143 ? N ILE A 141 O TYR A 168 ? O TYR A 166 AA1 5 6 N PHE A 169 ? N PHE A 167 O PHE A 217 ? O PHE A 215 # _atom_sites.entry_id 7VEX _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014364 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013203 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012404 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 -1 GLY GLY A . n A 1 2 PRO 2 0 0 PRO PRO A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 ALA 4 2 2 ALA ALA A . n A 1 5 TRP 5 3 3 TRP TRP A . n A 1 6 ALA 6 4 4 ALA ALA A . n A 1 7 SER 7 5 5 SER SER A . n A 1 8 SER 8 6 6 SER SER A . n A 1 9 PHE 9 7 7 PHE PHE A . n A 1 10 ASP 10 8 8 ASP ASP A . n A 1 11 ALA 11 9 9 ALA ALA A . n A 1 12 PHE 12 10 10 PHE PHE A . n A 1 13 PHE 13 11 11 PHE PHE A . n A 1 14 LYS 14 12 12 LYS LYS A . n A 1 15 ASN 15 13 13 ASN ASN A . n A 1 16 PHE 16 14 14 PHE PHE A . n A 1 17 LYS 17 15 15 LYS LYS A . n A 1 18 ARG 18 16 16 ARG ARG A . n A 1 19 GLU 19 17 17 GLU GLU A . n A 1 20 SER 20 18 18 SER SER A . n A 1 21 LYS 21 19 19 LYS LYS A . n A 1 22 ILE 22 20 20 ILE ILE A . n A 1 23 ILE 23 21 21 ILE ILE A . n A 1 24 SER 24 22 22 SER SER A . n A 1 25 GLU 25 23 23 GLU GLU A . n A 1 26 TYR 26 24 24 TYR TYR A . n A 1 27 ASP 27 25 25 ASP ASP A . n A 1 28 ILE 28 26 26 ILE ILE A . n A 1 29 THR 29 27 27 THR THR A . n A 1 30 LEU 30 28 28 LEU LEU A . n A 1 31 ILE 31 29 29 ILE ILE A . n A 1 32 MET 32 30 30 MET MET A . n A 1 33 THR 33 31 31 THR THR A . n A 1 34 TYR 34 32 32 TYR TYR A . n A 1 35 ILE 35 33 33 ILE ILE A . n A 1 36 GLU 36 34 34 GLU GLU A . n A 1 37 GLU 37 35 35 GLU GLU A . n A 1 38 ASN 38 36 36 ASN ASN A . n A 1 39 LYS 39 37 37 LYS LYS A . n A 1 40 LEU 40 38 38 LEU LEU A . n A 1 41 GLN 41 39 39 GLN GLN A . n A 1 42 LYS 42 40 40 LYS LYS A . n A 1 43 ALA 43 41 41 ALA ALA A . n A 1 44 VAL 44 42 42 VAL VAL A . n A 1 45 SER 45 43 43 SER SER A . n A 1 46 VAL 46 44 44 VAL VAL A . n A 1 47 ILE 47 45 45 ILE ILE A . n A 1 48 GLU 48 46 46 GLU GLU A . n A 1 49 LYS 49 47 47 LYS LYS A . n A 1 50 VAL 50 48 48 VAL VAL A . n A 1 51 LEU 51 49 49 LEU LEU A . n A 1 52 ARG 52 50 50 ARG ARG A . n A 1 53 ASP 53 51 51 ASP ASP A . n A 1 54 ILE 54 52 52 ILE ILE A . n A 1 55 GLU 55 53 53 GLU GLU A . n A 1 56 SER 56 54 54 SER SER A . n A 1 57 ALA 57 55 55 ALA ALA A . n A 1 58 PRO 58 56 56 PRO PRO A . n A 1 59 LEU 59 57 57 LEU LEU A . n A 1 60 HIS 60 58 58 HIS HIS A . n A 1 61 ILE 61 59 59 ILE ILE A . n A 1 62 ALA 62 60 60 ALA ALA A . n A 1 63 VAL 63 61 61 VAL VAL A . n A 1 64 THR 64 62 62 THR THR A . n A 1 65 GLY 65 63 63 GLY GLY A . n A 1 66 GLU 66 64 64 GLU GLU A . n A 1 67 THR 67 65 65 THR THR A . n A 1 68 GLY 68 66 66 GLY GLY A . n A 1 69 ALA 69 67 67 ALA ALA A . n A 1 70 GLY 70 68 68 GLY GLY A . n A 1 71 LYS 71 69 69 LYS LYS A . n A 1 72 SER 72 70 70 SER SER A . n A 1 73 THR 73 71 71 THR THR A . n A 1 74 PHE 74 72 72 PHE PHE A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 ASN 76 74 74 ASN ASN A . n A 1 77 THR 77 75 75 THR THR A . n A 1 78 LEU 78 76 76 LEU LEU A . n A 1 79 ARG 79 77 77 ARG ARG A . n A 1 80 GLY 80 78 78 GLY GLY A . n A 1 81 VAL 81 79 79 VAL VAL A . n A 1 82 GLY 82 80 80 GLY GLY A . n A 1 83 HIS 83 81 81 HIS HIS A . n A 1 84 GLU 84 82 82 GLU GLU A . n A 1 85 GLU 85 83 83 GLU GLU A . n A 1 86 LYS 86 84 84 LYS LYS A . n A 1 87 GLY 87 85 85 GLY GLY A . n A 1 88 ALA 88 86 86 ALA ALA A . n A 1 89 ALA 89 87 87 ALA ALA A . n A 1 90 PRO 90 88 88 PRO PRO A . n A 1 91 THR 91 89 89 THR THR A . n A 1 92 GLY 92 90 ? ? ? A . n A 1 93 ALA 93 91 ? ? ? A . n A 1 94 ILE 94 92 ? ? ? A . n A 1 95 GLU 95 93 ? ? ? A . n A 1 96 THR 96 94 ? ? ? A . n A 1 97 THR 97 95 95 THR THR A . n A 1 98 MET 98 96 96 MET MET A . n A 1 99 LYS 99 97 97 LYS LYS A . n A 1 100 ARG 100 98 98 ARG ARG A . n A 1 101 THR 101 99 99 THR THR A . n A 1 102 PRO 102 100 100 PRO PRO A . n A 1 103 TYR 103 101 101 TYR TYR A . n A 1 104 PRO 104 102 102 PRO PRO A . n A 1 105 HIS 105 103 103 HIS HIS A . n A 1 106 PRO 106 104 104 PRO PRO A . n A 1 107 LYS 107 105 105 LYS LYS A . n A 1 108 LEU 108 106 106 LEU LEU A . n A 1 109 PRO 109 107 107 PRO PRO A . n A 1 110 ASN 110 108 108 ASN ASN A . n A 1 111 VAL 111 109 109 VAL VAL A . n A 1 112 THR 112 110 110 THR THR A . n A 1 113 ILE 113 111 111 ILE ILE A . n A 1 114 TRP 114 112 112 TRP TRP A . n A 1 115 ASP 115 113 113 ASP ASP A . n A 1 116 LEU 116 114 114 LEU LEU A . n A 1 117 PRO 117 115 115 PRO PRO A . n A 1 118 GLY 118 116 116 GLY GLY A . n A 1 119 ILE 119 117 117 ILE ILE A . n A 1 120 GLY 120 118 118 GLY GLY A . n A 1 121 THR 121 119 119 THR THR A . n A 1 122 THR 122 120 120 THR THR A . n A 1 123 ASN 123 121 121 ASN ASN A . n A 1 124 PHE 124 122 122 PHE PHE A . n A 1 125 THR 125 123 123 THR THR A . n A 1 126 PRO 126 124 124 PRO PRO A . n A 1 127 GLN 127 125 125 GLN GLN A . n A 1 128 ASN 128 126 126 ASN ASN A . n A 1 129 TYR 129 127 127 TYR TYR A . n A 1 130 LEU 130 128 128 LEU LEU A . n A 1 131 THR 131 129 129 THR THR A . n A 1 132 GLU 132 130 130 GLU GLU A . n A 1 133 MET 133 131 131 MET MET A . n A 1 134 LYS 134 132 132 LYS LYS A . n A 1 135 PHE 135 133 133 PHE PHE A . n A 1 136 GLY 136 134 134 GLY GLY A . n A 1 137 GLU 137 135 135 GLU GLU A . n A 1 138 TYR 138 136 136 TYR TYR A . n A 1 139 ASP 139 137 137 ASP ASP A . n A 1 140 PHE 140 138 138 PHE PHE A . n A 1 141 PHE 141 139 139 PHE PHE A . n A 1 142 ILE 142 140 140 ILE ILE A . n A 1 143 ILE 143 141 141 ILE ILE A . n A 1 144 ILE 144 142 142 ILE ILE A . n A 1 145 SER 145 143 143 SER SER A . n A 1 146 ALA 146 144 144 ALA ALA A . n A 1 147 THR 147 145 145 THR THR A . n A 1 148 ARG 148 146 146 ARG ARG A . n A 1 149 PHE 149 147 147 PHE PHE A . n A 1 150 LYS 150 148 148 LYS LYS A . n A 1 151 GLU 151 149 149 GLU GLU A . n A 1 152 ASN 152 150 150 ASN ASN A . n A 1 153 ASP 153 151 151 ASP ASP A . n A 1 154 ALA 154 152 152 ALA ALA A . n A 1 155 GLN 155 153 153 GLN GLN A . n A 1 156 LEU 156 154 154 LEU LEU A . n A 1 157 ALA 157 155 155 ALA ALA A . n A 1 158 LYS 158 156 156 LYS LYS A . n A 1 159 ALA 159 157 157 ALA ALA A . n A 1 160 ILE 160 158 158 ILE ILE A . n A 1 161 ALA 161 159 159 ALA ALA A . n A 1 162 GLN 162 160 160 GLN GLN A . n A 1 163 MET 163 161 161 MET MET A . n A 1 164 GLY 164 162 162 GLY GLY A . n A 1 165 MET 165 163 163 MET MET A . n A 1 166 ASN 166 164 164 ASN ASN A . n A 1 167 PHE 167 165 165 PHE PHE A . n A 1 168 TYR 168 166 166 TYR TYR A . n A 1 169 PHE 169 167 167 PHE PHE A . n A 1 170 VAL 170 168 168 VAL VAL A . n A 1 171 ARG 171 169 169 ARG ARG A . n A 1 172 THR 172 170 170 THR THR A . n A 1 173 LYS 173 171 171 LYS LYS A . n A 1 174 ILE 174 172 172 ILE ILE A . n A 1 175 ASP 175 173 173 ASP ASP A . n A 1 176 SER 176 174 174 SER SER A . n A 1 177 ASP 177 175 175 ASP ASP A . n A 1 178 LEU 178 176 176 LEU LEU A . n A 1 179 ASP 179 177 177 ASP ASP A . n A 1 180 ASN 180 178 178 ASN ASN A . n A 1 181 GLU 181 179 179 GLU GLU A . n A 1 182 GLN 182 180 180 GLN GLN A . n A 1 183 LYS 183 181 181 LYS LYS A . n A 1 184 PHE 184 182 182 PHE PHE A . n A 1 185 LYS 185 183 183 LYS LYS A . n A 1 186 PRO 186 184 184 PRO PRO A . n A 1 187 LYS 187 185 185 LYS LYS A . n A 1 188 SER 188 186 186 SER SER A . n A 1 189 PHE 189 187 187 PHE PHE A . n A 1 190 ASN 190 188 188 ASN ASN A . n A 1 191 LYS 191 189 189 LYS LYS A . n A 1 192 GLU 192 190 190 GLU GLU A . n A 1 193 GLU 193 191 191 GLU GLU A . n A 1 194 VAL 194 192 192 VAL VAL A . n A 1 195 LEU 195 193 193 LEU LEU A . n A 1 196 LYS 196 194 194 LYS LYS A . n A 1 197 ASN 197 195 195 ASN ASN A . n A 1 198 ILE 198 196 196 ILE ILE A . n A 1 199 LYS 199 197 197 LYS LYS A . n A 1 200 ASP 200 198 198 ASP ASP A . n A 1 201 TYR 201 199 199 TYR TYR A . n A 1 202 CYS 202 200 200 CYS CYS A . n A 1 203 SER 203 201 201 SER SER A . n A 1 204 ASN 204 202 202 ASN ASN A . n A 1 205 HIS 205 203 203 HIS HIS A . n A 1 206 LEU 206 204 204 LEU LEU A . n A 1 207 GLN 207 205 205 GLN GLN A . n A 1 208 GLU 208 206 206 GLU GLU A . n A 1 209 SER 209 207 207 SER SER A . n A 1 210 LEU 210 208 208 LEU LEU A . n A 1 211 ASP 211 209 209 ASP ASP A . n A 1 212 SER 212 210 210 SER SER A . n A 1 213 GLU 213 211 211 GLU GLU A . n A 1 214 PRO 214 212 212 PRO PRO A . n A 1 215 PRO 215 213 213 PRO PRO A . n A 1 216 VAL 216 214 214 VAL VAL A . n A 1 217 PHE 217 215 215 PHE PHE A . n A 1 218 LEU 218 216 216 LEU LEU A . n A 1 219 VAL 219 217 217 VAL VAL A . n A 1 220 SER 220 218 218 SER SER A . n A 1 221 ASN 221 219 219 ASN ASN A . n A 1 222 VAL 222 220 220 VAL VAL A . n A 1 223 ASP 223 221 221 ASP ASP A . n A 1 224 ILE 224 222 222 ILE ILE A . n A 1 225 SER 225 223 223 SER SER A . n A 1 226 LYS 226 224 224 LYS LYS A . n A 1 227 TYR 227 225 225 TYR TYR A . n A 1 228 ASP 228 226 226 ASP ASP A . n A 1 229 PHE 229 227 227 PHE PHE A . n A 1 230 PRO 230 228 228 PRO PRO A . n A 1 231 LYS 231 229 229 LYS LYS A . n A 1 232 LEU 232 230 230 LEU LEU A . n A 1 233 GLU 233 231 231 GLU GLU A . n A 1 234 THR 234 232 232 THR THR A . n A 1 235 LYS 235 233 233 LYS LYS A . n A 1 236 LEU 236 234 234 LEU LEU A . n A 1 237 LEU 237 235 235 LEU LEU A . n A 1 238 GLN 238 236 236 GLN GLN A . n A 1 239 ASP 239 237 237 ASP ASP A . n A 1 240 LEU 240 238 238 LEU LEU A . n A 1 241 PRO 241 239 239 PRO PRO A . n A 1 242 ALA 242 240 240 ALA ALA A . n A 1 243 HIS 243 241 241 HIS HIS A . n A 1 244 LYS 244 242 242 LYS LYS A . n A 1 245 ARG 245 243 243 ARG ARG A . n A 1 246 HIS 246 244 244 HIS HIS A . n A 1 247 VAL 247 245 245 VAL VAL A . n A 1 248 PHE 248 246 246 PHE PHE A . n A 1 249 SER 249 247 247 SER SER A . n A 1 250 LEU 250 248 248 LEU LEU A . n A 1 251 SER 251 249 249 SER SER A . n A 1 252 LEU 252 250 250 LEU LEU A . n A 1 253 GLN 253 251 251 GLN GLN A . n A 1 254 SER 254 252 252 SER SER A . n A 1 255 LEU 255 253 253 LEU LEU A . n A 1 256 THR 256 254 254 THR THR A . n A 1 257 GLU 257 255 255 GLU GLU A . n A 1 258 ALA 258 256 256 ALA ALA A . n A 1 259 THR 259 257 257 THR THR A . n A 1 260 ILE 260 258 258 ILE ILE A . n A 1 261 ASN 261 259 259 ASN ASN A . n A 1 262 TYR 262 260 260 TYR TYR A . n A 1 263 LYS 263 261 261 LYS LYS A . n A 1 264 ARG 264 262 262 ARG ARG A . n A 1 265 ASP 265 263 263 ASP ASP A . n A 1 266 SER 266 264 264 SER SER A . n A 1 267 LEU 267 265 265 LEU LEU A . n A 1 268 LYS 268 266 266 LYS LYS A . n A 1 269 GLN 269 267 267 GLN GLN A . n A 1 270 LYS 270 268 268 LYS LYS A . n A 1 271 VAL 271 269 269 VAL VAL A . n A 1 272 PHE 272 270 270 PHE PHE A . n A 1 273 LEU 273 271 271 LEU LEU A . n A 1 274 GLU 274 272 272 GLU GLU A . n A 1 275 ALA 275 273 273 ALA ALA A . n A 1 276 MET 276 274 274 MET MET A . n A 1 277 LYS 277 275 275 LYS LYS A . n A 1 278 ALA 278 276 276 ALA ALA A . n A 1 279 GLY 279 277 277 GLY GLY A . n A 1 280 ALA 280 278 278 ALA ALA A . n A 1 281 LEU 281 279 279 LEU LEU A . n A 1 282 ALA 282 280 280 ALA ALA A . n A 1 283 THR 283 281 281 THR THR A . n A 1 284 ILE 284 282 282 ILE ILE A . n A 1 285 PRO 285 283 283 PRO PRO A . n A 1 286 LEU 286 284 284 LEU LEU A . n A 1 287 GLY 287 285 285 GLY GLY A . n A 1 288 GLY 288 286 286 GLY GLY A . n A 1 289 MET 289 287 287 MET MET A . n A 1 290 ILE 290 288 288 ILE ILE A . n A 1 291 SER 291 289 289 SER SER A . n A 1 292 ASP 292 290 290 ASP ASP A . n A 1 293 ILE 293 291 291 ILE ILE A . n A 1 294 LEU 294 292 292 LEU LEU A . n A 1 295 GLU 295 293 293 GLU GLU A . n A 1 296 ASN 296 294 294 ASN ASN A . n A 1 297 LEU 297 295 295 LEU LEU A . n A 1 298 ASP 298 296 296 ASP ASP A . n A 1 299 GLU 299 297 297 GLU GLU A . n A 1 300 THR 300 298 298 THR THR A . n A 1 301 PHE 301 299 299 PHE PHE A . n A 1 302 ASN 302 300 300 ASN ASN A . n A 1 303 LEU 303 301 301 LEU LEU A . n A 1 304 TYR 304 302 302 TYR TYR A . n A 1 305 ARG 305 303 303 ARG ARG A . n A 1 306 SER 306 304 304 SER SER A . n A 1 307 TYR 307 305 305 TYR TYR A . n A 1 308 PHE 308 306 306 PHE PHE A . n A 1 309 GLY 309 307 307 GLY GLY A . n A 1 310 LEU 310 308 308 LEU LEU A . n A 1 311 ASP 311 309 309 ASP ASP A . n A 1 312 ASP 312 310 310 ASP ASP A . n A 1 313 ALA 313 311 311 ALA ALA A . n A 1 314 SER 314 312 312 SER SER A . n A 1 315 LEU 315 313 313 LEU LEU A . n A 1 316 GLU 316 314 314 GLU GLU A . n A 1 317 ASN 317 315 315 ASN ASN A . n A 1 318 ILE 318 316 316 ILE ILE A . n A 1 319 ALA 319 317 317 ALA ALA A . n A 1 320 GLN 320 318 318 GLN GLN A . n A 1 321 ASP 321 319 319 ASP ASP A . n A 1 322 LEU 322 320 320 LEU LEU A . n A 1 323 ASN 323 321 321 ASN ASN A . n A 1 324 MET 324 322 322 MET MET A . n A 1 325 SER 325 323 323 SER SER A . n A 1 326 VAL 326 324 324 VAL VAL A . n A 1 327 ASP 327 325 325 ASP ASP A . n A 1 328 ASP 328 326 326 ASP ASP A . n A 1 329 PHE 329 327 327 PHE PHE A . n A 1 330 LYS 330 328 328 LYS LYS A . n A 1 331 VAL 331 329 329 VAL VAL A . n A 1 332 HIS 332 330 330 HIS HIS A . n A 1 333 LEU 333 331 331 LEU LEU A . n A 1 334 ARG 334 332 332 ARG ARG A . n A 1 335 PHE 335 333 333 PHE PHE A . n A 1 336 PRO 336 334 334 PRO PRO A . n A 1 337 HIS 337 335 335 HIS HIS A . n A 1 338 LEU 338 336 336 LEU LEU A . n A 1 339 PHE 339 337 337 PHE PHE A . n A 1 340 ALA 340 338 338 ALA ALA A . n A 1 341 GLU 341 339 339 GLU GLU A . n A 1 342 HIS 342 340 340 HIS HIS A . n A 1 343 ASN 343 341 341 ASN ASN A . n A 1 344 ASP 344 342 342 ASP ASP A . n A 1 345 GLU 345 343 343 GLU GLU A . n A 1 346 SER 346 344 344 SER SER A . n A 1 347 LEU 347 345 345 LEU LEU A . n A 1 348 GLU 348 346 346 GLU GLU A . n A 1 349 ASP 349 347 347 ASP ASP A . n A 1 350 LYS 350 348 348 LYS LYS A . n A 1 351 LEU 351 349 349 LEU LEU A . n A 1 352 PHE 352 350 350 PHE PHE A . n A 1 353 LYS 353 351 351 LYS LYS A . n A 1 354 TYR 354 352 352 TYR TYR A . n A 1 355 ILE 355 353 353 ILE ILE A . n A 1 356 LYS 356 354 354 LYS LYS A . n A 1 357 HIS 357 355 355 HIS HIS A . n A 1 358 ILE 358 356 356 ILE ILE A . n A 1 359 SER 359 357 357 SER SER A . n A 1 360 SER 360 358 358 SER SER A . n A 1 361 VAL 361 359 359 VAL VAL A . n A 1 362 THR 362 360 360 THR THR A . n A 1 363 GLY 363 361 361 GLY GLY A . n A 1 364 GLY 364 362 362 GLY GLY A . n A 1 365 PRO 365 363 363 PRO PRO A . n A 1 366 VAL 366 364 364 VAL VAL A . n A 1 367 ALA 367 365 365 ALA ALA A . n A 1 368 ALA 368 366 366 ALA ALA A . n A 1 369 VAL 369 367 367 VAL VAL A . n A 1 370 THR 370 368 368 THR THR A . n A 1 371 TYR 371 369 369 TYR TYR A . n A 1 372 TYR 372 370 370 TYR TYR A . n A 1 373 ARG 373 371 371 ARG ARG A . n A 1 374 MET 374 372 372 MET MET A . n A 1 375 ALA 375 373 373 ALA ALA A . n A 1 376 TYR 376 374 374 TYR TYR A . n A 1 377 TYR 377 375 375 TYR TYR A . n A 1 378 LEU 378 376 376 LEU LEU A . n A 1 379 GLN 379 377 377 GLN GLN A . n A 1 380 ASN 380 378 378 ASN ASN A . n A 1 381 LEU 381 379 379 LEU LEU A . n A 1 382 PHE 382 380 380 PHE PHE A . n A 1 383 LEU 383 381 381 LEU LEU A . n A 1 384 ASP 384 382 382 ASP ASP A . n A 1 385 THR 385 383 383 THR THR A . n A 1 386 ALA 386 384 384 ALA ALA A . n A 1 387 ALA 387 385 385 ALA ALA A . n A 1 388 ASN 388 386 386 ASN ASN A . n A 1 389 ASP 389 387 387 ASP ASP A . n A 1 390 ALA 390 388 388 ALA ALA A . n A 1 391 ILE 391 389 389 ILE ILE A . n A 1 392 ALA 392 390 390 ALA ALA A . n A 1 393 LEU 393 391 391 LEU LEU A . n A 1 394 LEU 394 392 392 LEU LEU A . n A 1 395 ASN 395 393 393 ASN ASN A . n A 1 396 SER 396 394 394 SER SER A . n A 1 397 LYS 397 395 395 LYS LYS A . n A 1 398 ALA 398 396 396 ALA ALA A . n A 1 399 LEU 399 397 397 LEU LEU A . n A 1 400 PHE 400 398 398 PHE PHE A . n A 1 401 GLU 401 399 399 GLU GLU A . n A 1 402 LYS 402 400 400 LYS LYS A . n A 1 403 LYS 403 401 401 LYS LYS A . n A 1 404 VAL 404 402 402 VAL VAL A . n A 1 405 GLY 405 403 403 GLY GLY A . n A 1 406 PRO 406 404 404 PRO PRO A . n A 1 407 TYR 407 405 405 TYR TYR A . n A 1 408 ILE 408 406 406 ILE ILE A . n A 1 409 SER 409 407 407 SER SER A . n A 1 410 GLU 410 408 408 GLU GLU A . n A 1 411 PRO 411 409 409 PRO PRO A . n A 1 412 PRO 412 410 410 PRO PRO A . n A 1 413 GLU 413 411 411 GLU GLU A . n A 1 414 TYR 414 412 412 TYR TYR A . n A 1 415 TRP 415 413 413 TRP TRP A . n A 1 416 GLU 416 414 414 GLU GLU A . n A 1 417 ALA 417 415 415 ALA ALA A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email ryonitta@med.kobe-u.ac.jp _pdbx_contact_author.name_first Ryo _pdbx_contact_author.name_last Nitta _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-6537-9272 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GTP 1 501 502 GTP GTP A . C 3 HOH 1 601 409 HOH HOH A . C 3 HOH 2 602 392 HOH HOH A . C 3 HOH 3 603 411 HOH HOH A . C 3 HOH 4 604 375 HOH HOH A . C 3 HOH 5 605 65 HOH HOH A . C 3 HOH 6 606 258 HOH HOH A . C 3 HOH 7 607 129 HOH HOH A . C 3 HOH 8 608 99 HOH HOH A . C 3 HOH 9 609 410 HOH HOH A . C 3 HOH 10 610 248 HOH HOH A . C 3 HOH 11 611 147 HOH HOH A . C 3 HOH 12 612 263 HOH HOH A . C 3 HOH 13 613 378 HOH HOH A . C 3 HOH 14 614 377 HOH HOH A . C 3 HOH 15 615 404 HOH HOH A . C 3 HOH 16 616 372 HOH HOH A . C 3 HOH 17 617 144 HOH HOH A . C 3 HOH 18 618 350 HOH HOH A . C 3 HOH 19 619 217 HOH HOH A . C 3 HOH 20 620 413 HOH HOH A . C 3 HOH 21 621 150 HOH HOH A . C 3 HOH 22 622 371 HOH HOH A . C 3 HOH 23 623 143 HOH HOH A . C 3 HOH 24 624 183 HOH HOH A . C 3 HOH 25 625 113 HOH HOH A . C 3 HOH 26 626 132 HOH HOH A . C 3 HOH 27 627 397 HOH HOH A . C 3 HOH 28 628 401 HOH HOH A . C 3 HOH 29 629 325 HOH HOH A . C 3 HOH 30 630 275 HOH HOH A . C 3 HOH 31 631 373 HOH HOH A . C 3 HOH 32 632 385 HOH HOH A . C 3 HOH 33 633 297 HOH HOH A . C 3 HOH 34 634 134 HOH HOH A . C 3 HOH 35 635 298 HOH HOH A . C 3 HOH 36 636 405 HOH HOH A . C 3 HOH 37 637 19 HOH HOH A . C 3 HOH 38 638 386 HOH HOH A . C 3 HOH 39 639 95 HOH HOH A . C 3 HOH 40 640 100 HOH HOH A . C 3 HOH 41 641 383 HOH HOH A . C 3 HOH 42 642 133 HOH HOH A . C 3 HOH 43 643 374 HOH HOH A . C 3 HOH 44 644 6 HOH HOH A . C 3 HOH 45 645 201 HOH HOH A . C 3 HOH 46 646 85 HOH HOH A . C 3 HOH 47 647 61 HOH HOH A . C 3 HOH 48 648 124 HOH HOH A . C 3 HOH 49 649 388 HOH HOH A . C 3 HOH 50 650 270 HOH HOH A . C 3 HOH 51 651 76 HOH HOH A . C 3 HOH 52 652 380 HOH HOH A . C 3 HOH 53 653 326 HOH HOH A . C 3 HOH 54 654 267 HOH HOH A . C 3 HOH 55 655 161 HOH HOH A . C 3 HOH 56 656 73 HOH HOH A . C 3 HOH 57 657 308 HOH HOH A . C 3 HOH 58 658 381 HOH HOH A . C 3 HOH 59 659 101 HOH HOH A . C 3 HOH 60 660 23 HOH HOH A . C 3 HOH 61 661 346 HOH HOH A . C 3 HOH 62 662 7 HOH HOH A . C 3 HOH 63 663 345 HOH HOH A . C 3 HOH 64 664 137 HOH HOH A . C 3 HOH 65 665 5 HOH HOH A . C 3 HOH 66 666 223 HOH HOH A . C 3 HOH 67 667 412 HOH HOH A . C 3 HOH 68 668 376 HOH HOH A . C 3 HOH 69 669 390 HOH HOH A . C 3 HOH 70 670 384 HOH HOH A . C 3 HOH 71 671 177 HOH HOH A . C 3 HOH 72 672 1 HOH HOH A . C 3 HOH 73 673 153 HOH HOH A . C 3 HOH 74 674 265 HOH HOH A . C 3 HOH 75 675 2 HOH HOH A . C 3 HOH 76 676 114 HOH HOH A . C 3 HOH 77 677 70 HOH HOH A . C 3 HOH 78 678 57 HOH HOH A . C 3 HOH 79 679 272 HOH HOH A . C 3 HOH 80 680 382 HOH HOH A . C 3 HOH 81 681 21 HOH HOH A . C 3 HOH 82 682 45 HOH HOH A . C 3 HOH 83 683 139 HOH HOH A . C 3 HOH 84 684 186 HOH HOH A . C 3 HOH 85 685 180 HOH HOH A . C 3 HOH 86 686 14 HOH HOH A . C 3 HOH 87 687 25 HOH HOH A . C 3 HOH 88 688 329 HOH HOH A . C 3 HOH 89 689 12 HOH HOH A . C 3 HOH 90 690 67 HOH HOH A . C 3 HOH 91 691 136 HOH HOH A . C 3 HOH 92 692 49 HOH HOH A . C 3 HOH 93 693 296 HOH HOH A . C 3 HOH 94 694 159 HOH HOH A . C 3 HOH 95 695 84 HOH HOH A . C 3 HOH 96 696 396 HOH HOH A . C 3 HOH 97 697 393 HOH HOH A . C 3 HOH 98 698 17 HOH HOH A . C 3 HOH 99 699 56 HOH HOH A . C 3 HOH 100 700 157 HOH HOH A . C 3 HOH 101 701 36 HOH HOH A . C 3 HOH 102 702 77 HOH HOH A . C 3 HOH 103 703 87 HOH HOH A . C 3 HOH 104 704 24 HOH HOH A . C 3 HOH 105 705 53 HOH HOH A . C 3 HOH 106 706 110 HOH HOH A . C 3 HOH 107 707 112 HOH HOH A . C 3 HOH 108 708 35 HOH HOH A . C 3 HOH 109 709 118 HOH HOH A . C 3 HOH 110 710 83 HOH HOH A . C 3 HOH 111 711 357 HOH HOH A . C 3 HOH 112 712 27 HOH HOH A . C 3 HOH 113 713 3 HOH HOH A . C 3 HOH 114 714 108 HOH HOH A . C 3 HOH 115 715 30 HOH HOH A . C 3 HOH 116 716 255 HOH HOH A . C 3 HOH 117 717 368 HOH HOH A . C 3 HOH 118 718 98 HOH HOH A . C 3 HOH 119 719 22 HOH HOH A . C 3 HOH 120 720 74 HOH HOH A . C 3 HOH 121 721 315 HOH HOH A . C 3 HOH 122 722 394 HOH HOH A . C 3 HOH 123 723 294 HOH HOH A . C 3 HOH 124 724 399 HOH HOH A . C 3 HOH 125 725 179 HOH HOH A . C 3 HOH 126 726 16 HOH HOH A . C 3 HOH 127 727 31 HOH HOH A . C 3 HOH 128 728 72 HOH HOH A . C 3 HOH 129 729 192 HOH HOH A . C 3 HOH 130 730 218 HOH HOH A . C 3 HOH 131 731 216 HOH HOH A . C 3 HOH 132 732 130 HOH HOH A . C 3 HOH 133 733 15 HOH HOH A . C 3 HOH 134 734 215 HOH HOH A . C 3 HOH 135 735 282 HOH HOH A . C 3 HOH 136 736 288 HOH HOH A . C 3 HOH 137 737 43 HOH HOH A . C 3 HOH 138 738 336 HOH HOH A . C 3 HOH 139 739 141 HOH HOH A . C 3 HOH 140 740 52 HOH HOH A . C 3 HOH 141 741 269 HOH HOH A . C 3 HOH 142 742 50 HOH HOH A . C 3 HOH 143 743 146 HOH HOH A . C 3 HOH 144 744 128 HOH HOH A . C 3 HOH 145 745 406 HOH HOH A . C 3 HOH 146 746 46 HOH HOH A . C 3 HOH 147 747 278 HOH HOH A . C 3 HOH 148 748 48 HOH HOH A . C 3 HOH 149 749 389 HOH HOH A . C 3 HOH 150 750 96 HOH HOH A . C 3 HOH 151 751 60 HOH HOH A . C 3 HOH 152 752 116 HOH HOH A . C 3 HOH 153 753 54 HOH HOH A . C 3 HOH 154 754 213 HOH HOH A . C 3 HOH 155 755 89 HOH HOH A . C 3 HOH 156 756 301 HOH HOH A . C 3 HOH 157 757 62 HOH HOH A . C 3 HOH 158 758 71 HOH HOH A . C 3 HOH 159 759 230 HOH HOH A . C 3 HOH 160 760 51 HOH HOH A . C 3 HOH 161 761 398 HOH HOH A . C 3 HOH 162 762 370 HOH HOH A . C 3 HOH 163 763 200 HOH HOH A . C 3 HOH 164 764 328 HOH HOH A . C 3 HOH 165 765 138 HOH HOH A . C 3 HOH 166 766 360 HOH HOH A . C 3 HOH 167 767 39 HOH HOH A . C 3 HOH 168 768 107 HOH HOH A . C 3 HOH 169 769 340 HOH HOH A . C 3 HOH 170 770 293 HOH HOH A . C 3 HOH 171 771 219 HOH HOH A . C 3 HOH 172 772 40 HOH HOH A . C 3 HOH 173 773 9 HOH HOH A . C 3 HOH 174 774 86 HOH HOH A . C 3 HOH 175 775 26 HOH HOH A . C 3 HOH 176 776 20 HOH HOH A . C 3 HOH 177 777 63 HOH HOH A . C 3 HOH 178 778 164 HOH HOH A . C 3 HOH 179 779 196 HOH HOH A . C 3 HOH 180 780 93 HOH HOH A . C 3 HOH 181 781 366 HOH HOH A . C 3 HOH 182 782 47 HOH HOH A . C 3 HOH 183 783 64 HOH HOH A . C 3 HOH 184 784 358 HOH HOH A . C 3 HOH 185 785 274 HOH HOH A . C 3 HOH 186 786 8 HOH HOH A . C 3 HOH 187 787 55 HOH HOH A . C 3 HOH 188 788 32 HOH HOH A . C 3 HOH 189 789 257 HOH HOH A . C 3 HOH 190 790 395 HOH HOH A . C 3 HOH 191 791 221 HOH HOH A . C 3 HOH 192 792 4 HOH HOH A . C 3 HOH 193 793 304 HOH HOH A . C 3 HOH 194 794 37 HOH HOH A . C 3 HOH 195 795 313 HOH HOH A . C 3 HOH 196 796 361 HOH HOH A . C 3 HOH 197 797 33 HOH HOH A . C 3 HOH 198 798 173 HOH HOH A . C 3 HOH 199 799 259 HOH HOH A . C 3 HOH 200 800 402 HOH HOH A . C 3 HOH 201 801 38 HOH HOH A . C 3 HOH 202 802 321 HOH HOH A . C 3 HOH 203 803 240 HOH HOH A . C 3 HOH 204 804 58 HOH HOH A . C 3 HOH 205 805 82 HOH HOH A . C 3 HOH 206 806 365 HOH HOH A . C 3 HOH 207 807 152 HOH HOH A . C 3 HOH 208 808 11 HOH HOH A . C 3 HOH 209 809 286 HOH HOH A . C 3 HOH 210 810 251 HOH HOH A . C 3 HOH 211 811 135 HOH HOH A . C 3 HOH 212 812 195 HOH HOH A . C 3 HOH 213 813 407 HOH HOH A . C 3 HOH 214 814 148 HOH HOH A . C 3 HOH 215 815 106 HOH HOH A . C 3 HOH 216 816 80 HOH HOH A . C 3 HOH 217 817 379 HOH HOH A . C 3 HOH 218 818 391 HOH HOH A . C 3 HOH 219 819 339 HOH HOH A . C 3 HOH 220 820 156 HOH HOH A . C 3 HOH 221 821 302 HOH HOH A . C 3 HOH 222 822 228 HOH HOH A . C 3 HOH 223 823 202 HOH HOH A . C 3 HOH 224 824 111 HOH HOH A . C 3 HOH 225 825 247 HOH HOH A . C 3 HOH 226 826 189 HOH HOH A . C 3 HOH 227 827 199 HOH HOH A . C 3 HOH 228 828 316 HOH HOH A . C 3 HOH 229 829 29 HOH HOH A . C 3 HOH 230 830 363 HOH HOH A . C 3 HOH 231 831 287 HOH HOH A . C 3 HOH 232 832 403 HOH HOH A . C 3 HOH 233 833 174 HOH HOH A . C 3 HOH 234 834 224 HOH HOH A . C 3 HOH 235 835 237 HOH HOH A . C 3 HOH 236 836 125 HOH HOH A . C 3 HOH 237 837 351 HOH HOH A . C 3 HOH 238 838 314 HOH HOH A . C 3 HOH 239 839 109 HOH HOH A . C 3 HOH 240 840 145 HOH HOH A . C 3 HOH 241 841 90 HOH HOH A . C 3 HOH 242 842 317 HOH HOH A . C 3 HOH 243 843 367 HOH HOH A . C 3 HOH 244 844 168 HOH HOH A . C 3 HOH 245 845 222 HOH HOH A . C 3 HOH 246 846 276 HOH HOH A . C 3 HOH 247 847 119 HOH HOH A . C 3 HOH 248 848 165 HOH HOH A . C 3 HOH 249 849 94 HOH HOH A . C 3 HOH 250 850 131 HOH HOH A . C 3 HOH 251 851 198 HOH HOH A . C 3 HOH 252 852 68 HOH HOH A . C 3 HOH 253 853 348 HOH HOH A . C 3 HOH 254 854 120 HOH HOH A . C 3 HOH 255 855 256 HOH HOH A . C 3 HOH 256 856 236 HOH HOH A . C 3 HOH 257 857 210 HOH HOH A . C 3 HOH 258 858 169 HOH HOH A . C 3 HOH 259 859 34 HOH HOH A . C 3 HOH 260 860 320 HOH HOH A . C 3 HOH 261 861 227 HOH HOH A . C 3 HOH 262 862 225 HOH HOH A . C 3 HOH 263 863 408 HOH HOH A . C 3 HOH 264 864 234 HOH HOH A . C 3 HOH 265 865 306 HOH HOH A . C 3 HOH 266 866 323 HOH HOH A . C 3 HOH 267 867 166 HOH HOH A . C 3 HOH 268 868 122 HOH HOH A . C 3 HOH 269 869 312 HOH HOH A . C 3 HOH 270 870 226 HOH HOH A . C 3 HOH 271 871 190 HOH HOH A . C 3 HOH 272 872 220 HOH HOH A . C 3 HOH 273 873 18 HOH HOH A . C 3 HOH 274 874 205 HOH HOH A . C 3 HOH 275 875 299 HOH HOH A . C 3 HOH 276 876 252 HOH HOH A . C 3 HOH 277 877 330 HOH HOH A . C 3 HOH 278 878 400 HOH HOH A . C 3 HOH 279 879 280 HOH HOH A . C 3 HOH 280 880 175 HOH HOH A . C 3 HOH 281 881 292 HOH HOH A . C 3 HOH 282 882 295 HOH HOH A . C 3 HOH 283 883 149 HOH HOH A . C 3 HOH 284 884 262 HOH HOH A . C 3 HOH 285 885 160 HOH HOH A . C 3 HOH 286 886 142 HOH HOH A . C 3 HOH 287 887 291 HOH HOH A . C 3 HOH 288 888 121 HOH HOH A . C 3 HOH 289 889 207 HOH HOH A . C 3 HOH 290 890 268 HOH HOH A . C 3 HOH 291 891 338 HOH HOH A . C 3 HOH 292 892 242 HOH HOH A . C 3 HOH 293 893 140 HOH HOH A . C 3 HOH 294 894 102 HOH HOH A . C 3 HOH 295 895 181 HOH HOH A . C 3 HOH 296 896 250 HOH HOH A . C 3 HOH 297 897 356 HOH HOH A . C 3 HOH 298 898 349 HOH HOH A . C 3 HOH 299 899 44 HOH HOH A . C 3 HOH 300 900 387 HOH HOH A . C 3 HOH 301 901 271 HOH HOH A . C 3 HOH 302 902 253 HOH HOH A . C 3 HOH 303 903 249 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 680 ? 1 MORE -2 ? 1 'SSA (A^2)' 20290 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-11-03 2 'Structure model' 1 1 2022-02-16 3 'Structure model' 1 2 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.year' 9 2 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _pdbx_entry_details.entry_id 7VEX _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 609 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 863 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 641 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 787 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_556 _pdbx_validate_symm_contact.dist 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 37 ? ? -104.87 57.67 2 1 THR A 145 ? ? -132.52 -103.55 3 1 TYR A 225 ? ? 60.57 -133.36 4 1 SER A 252 ? ? -100.07 41.77 5 1 LYS A 401 ? ? -53.46 94.85 6 1 VAL A 402 ? ? -91.52 56.34 7 1 TYR A 412 ? ? 69.96 -3.46 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 90 ? A GLY 92 2 1 Y 1 A ALA 91 ? A ALA 93 3 1 Y 1 A ILE 92 ? A ILE 94 4 1 Y 1 A GLU 93 ? A GLU 95 5 1 Y 1 A THR 94 ? A THR 96 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GTP PG P N N 137 GTP O1G O N N 138 GTP O2G O N N 139 GTP O3G O N N 140 GTP O3B O N N 141 GTP PB P N N 142 GTP O1B O N N 143 GTP O2B O N N 144 GTP O3A O N N 145 GTP PA P N N 146 GTP O1A O N N 147 GTP O2A O N N 148 GTP "O5'" O N N 149 GTP "C5'" C N N 150 GTP "C4'" C N R 151 GTP "O4'" O N N 152 GTP "C3'" C N S 153 GTP "O3'" O N N 154 GTP "C2'" C N R 155 GTP "O2'" O N N 156 GTP "C1'" C N R 157 GTP N9 N Y N 158 GTP C8 C Y N 159 GTP N7 N Y N 160 GTP C5 C Y N 161 GTP C6 C N N 162 GTP O6 O N N 163 GTP N1 N N N 164 GTP C2 C N N 165 GTP N2 N N N 166 GTP N3 N N N 167 GTP C4 C Y N 168 GTP HOG2 H N N 169 GTP HOG3 H N N 170 GTP HOB2 H N N 171 GTP HOA2 H N N 172 GTP "H5'" H N N 173 GTP "H5''" H N N 174 GTP "H4'" H N N 175 GTP "H3'" H N N 176 GTP "HO3'" H N N 177 GTP "H2'" H N N 178 GTP "HO2'" H N N 179 GTP "H1'" H N N 180 GTP H8 H N N 181 GTP HN1 H N N 182 GTP HN21 H N N 183 GTP HN22 H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TRP N N N N 369 TRP CA C N S 370 TRP C C N N 371 TRP O O N N 372 TRP CB C N N 373 TRP CG C Y N 374 TRP CD1 C Y N 375 TRP CD2 C Y N 376 TRP NE1 N Y N 377 TRP CE2 C Y N 378 TRP CE3 C Y N 379 TRP CZ2 C Y N 380 TRP CZ3 C Y N 381 TRP CH2 C Y N 382 TRP OXT O N N 383 TRP H H N N 384 TRP H2 H N N 385 TRP HA H N N 386 TRP HB2 H N N 387 TRP HB3 H N N 388 TRP HD1 H N N 389 TRP HE1 H N N 390 TRP HE3 H N N 391 TRP HZ2 H N N 392 TRP HZ3 H N N 393 TRP HH2 H N N 394 TRP HXT H N N 395 TYR N N N N 396 TYR CA C N S 397 TYR C C N N 398 TYR O O N N 399 TYR CB C N N 400 TYR CG C Y N 401 TYR CD1 C Y N 402 TYR CD2 C Y N 403 TYR CE1 C Y N 404 TYR CE2 C Y N 405 TYR CZ C Y N 406 TYR OH O N N 407 TYR OXT O N N 408 TYR H H N N 409 TYR H2 H N N 410 TYR HA H N N 411 TYR HB2 H N N 412 TYR HB3 H N N 413 TYR HD1 H N N 414 TYR HD2 H N N 415 TYR HE1 H N N 416 TYR HE2 H N N 417 TYR HH H N N 418 TYR HXT H N N 419 VAL N N N N 420 VAL CA C N S 421 VAL C C N N 422 VAL O O N N 423 VAL CB C N N 424 VAL CG1 C N N 425 VAL CG2 C N N 426 VAL OXT O N N 427 VAL H H N N 428 VAL H2 H N N 429 VAL HA H N N 430 VAL HB H N N 431 VAL HG11 H N N 432 VAL HG12 H N N 433 VAL HG13 H N N 434 VAL HG21 H N N 435 VAL HG22 H N N 436 VAL HG23 H N N 437 VAL HXT H N N 438 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GTP PG O1G doub N N 129 GTP PG O2G sing N N 130 GTP PG O3G sing N N 131 GTP PG O3B sing N N 132 GTP O2G HOG2 sing N N 133 GTP O3G HOG3 sing N N 134 GTP O3B PB sing N N 135 GTP PB O1B doub N N 136 GTP PB O2B sing N N 137 GTP PB O3A sing N N 138 GTP O2B HOB2 sing N N 139 GTP O3A PA sing N N 140 GTP PA O1A doub N N 141 GTP PA O2A sing N N 142 GTP PA "O5'" sing N N 143 GTP O2A HOA2 sing N N 144 GTP "O5'" "C5'" sing N N 145 GTP "C5'" "C4'" sing N N 146 GTP "C5'" "H5'" sing N N 147 GTP "C5'" "H5''" sing N N 148 GTP "C4'" "O4'" sing N N 149 GTP "C4'" "C3'" sing N N 150 GTP "C4'" "H4'" sing N N 151 GTP "O4'" "C1'" sing N N 152 GTP "C3'" "O3'" sing N N 153 GTP "C3'" "C2'" sing N N 154 GTP "C3'" "H3'" sing N N 155 GTP "O3'" "HO3'" sing N N 156 GTP "C2'" "O2'" sing N N 157 GTP "C2'" "C1'" sing N N 158 GTP "C2'" "H2'" sing N N 159 GTP "O2'" "HO2'" sing N N 160 GTP "C1'" N9 sing N N 161 GTP "C1'" "H1'" sing N N 162 GTP N9 C8 sing Y N 163 GTP N9 C4 sing Y N 164 GTP C8 N7 doub Y N 165 GTP C8 H8 sing N N 166 GTP N7 C5 sing Y N 167 GTP C5 C6 sing N N 168 GTP C5 C4 doub Y N 169 GTP C6 O6 doub N N 170 GTP C6 N1 sing N N 171 GTP N1 C2 sing N N 172 GTP N1 HN1 sing N N 173 GTP C2 N2 sing N N 174 GTP C2 N3 doub N N 175 GTP N2 HN21 sing N N 176 GTP N2 HN22 sing N N 177 GTP N3 C4 sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Agency for Medical Research and Development (AMED)' Japan JP20fk0108137 1 'Japan Agency for Medical Research and Development (AMED)' Japan JP20wm0325010 2 'Japan Agency for Medical Research and Development (AMED)' Japan JP20jm0210067 3 'Japan Agency for Medical Research and Development (AMED)' Japan JP20am0101108 4 'Japan Agency for Medical Research and Development (AMED)' Japan JP20gm0810013 5 'Japan Society for the Promotion of Science (JSPS)' Japan 21K06988 6 'Japan Society for the Promotion of Science (JSPS)' Japan 20B304 7 'Japan Society for the Promotion of Science (JSPS)' Japan 19H04809 8 'Japan Society for the Promotion of Science (JSPS)' Japan 19H00970 9 'Japan Society for the Promotion of Science (JSPS)' Japan 19H03396 10 'Japan Agency for Medical Research and Development (AMED)' Japan JP19am0101070 11 'Japan Society for the Promotion of Science (JSPS)' Japan JPMJMS2024 12 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GTP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GTP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-TRIPHOSPHATE" GTP 3 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1TQD '1TQD, 1TPZ, 1TQ2' 2 ? 'experimental model' PDB 1TPZ '1TQD, 1TPZ, 1TQ2' 3 ? 'experimental model' PDB 1TQ2 '1TQD, 1TPZ, 1TQ2' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #