HEADER OXIDOREDUCTASE 29-SEP-21 7VJV TITLE HUMAN ALKB HOMOLOG ALKBH6 IN COMPLEX WITH ALPHA-KATOGLUTARATE AND MN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 6; COMPND 5 EC: 1.14.11.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ALKBH6, ABH6; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS ALKBH6, ALPHA-KETOGLUTARATE, OXIDOREDUCTASE ACTIVITY, DNA BINDING, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.MA,Z.CHEN REVDAT 4 29-NOV-23 7VJV 1 REMARK REVDAT 3 16-MAR-22 7VJV 1 JRNL REVDAT 2 23-FEB-22 7VJV 1 JRNL REVDAT 1 02-FEB-22 7VJV 0 JRNL AUTH L.MA,H.LU,Z.TIAN,M.YANG,J.MA,G.SHANG,Y.LIU,M.XIE,G.WANG, JRNL AUTH 2 W.WU,Z.ZHANG,S.DAI,Z.CHEN JRNL TITL STRUCTURAL INSIGHTS INTO THE INTERACTIONS AND EPIGENETIC JRNL TITL 2 FUNCTIONS OF HUMAN NUCLEIC ACID REPAIR PROTEIN ALKBH6. JRNL REF J.BIOL.CHEM. V. 298 01671 2022 JRNL REFN ESSN 1083-351X JRNL PMID 35120926 JRNL DOI 10.1016/J.JBC.2022.101671 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 26981 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.085 REMARK 3 FREE R VALUE TEST SET COUNT : 1372 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1873 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1705 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 86 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.00300 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.00700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.150 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1761 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1654 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2408 ; 1.495 ; 1.662 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3803 ; 1.329 ; 1.570 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 219 ; 7.304 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;31.252 ;20.330 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 264 ;12.270 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;12.990 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 218 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1980 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 384 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 289 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 43 ; 0.129 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 815 ; 0.163 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 79 ; 0.112 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 882 ; 1.731 ; 2.069 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 881 ; 1.700 ; 2.065 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1099 ; 2.589 ; 3.093 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1100 ; 2.600 ; 3.096 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 879 ; 2.552 ; 2.281 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 878 ; 2.552 ; 2.282 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1309 ; 3.957 ; 3.320 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1310 ; 3.956 ; 3.319 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7VJV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300024787. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27487 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 3THP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, TRIS, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.05900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.20800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.20350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.20800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.05900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.20350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 194 REMARK 465 ALA A 195 REMARK 465 SER A 196 REMARK 465 SER A 197 REMARK 465 PRO A 198 REMARK 465 PRO A 199 REMARK 465 ASN A 200 REMARK 465 ALA A 201 REMARK 465 ALA A 202 REMARK 465 ALA A 203 REMARK 465 CYS A 204 REMARK 465 PRO A 205 REMARK 465 SER A 206 REMARK 465 ALA A 207 REMARK 465 ARG A 208 REMARK 465 PRO A 209 REMARK 465 GLY A 210 REMARK 465 GLY A 239 REMARK 465 THR A 240 REMARK 465 GLU A 241 REMARK 465 ASN A 242 REMARK 465 LEU A 243 REMARK 465 TYR A 244 REMARK 465 PHE A 245 REMARK 465 GLN A 246 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 SD CE REMARK 470 GLN A 4 CG CD OE1 NE2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 MET A 112 CG SD CE REMARK 470 ARG A 141 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 142 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 143 CB CG REMARK 470 ASP A 145 CG OD1 OD2 REMARK 470 PRO A 152 CB CG CD REMARK 470 ARG A 153 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 154 CG CD REMARK 470 PRO A 155 CB CG CD REMARK 470 PRO A 156 CB CG CD REMARK 470 ARG A 157 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 179 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 213 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 98 14.48 -142.48 REMARK 500 ARG A 167 3.60 83.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 114 NE2 REMARK 620 2 ASP A 116 OD2 90.8 REMARK 620 3 HIS A 182 NE2 88.9 93.9 REMARK 620 4 AKG A 302 O1 91.9 95.0 171.1 REMARK 620 5 AKG A 302 O5 96.8 170.0 92.7 78.3 REMARK 620 6 HOH A 402 O 179.4 89.6 91.5 87.6 82.8 REMARK 620 N 1 2 3 4 5 DBREF 7VJV A 1 238 UNP Q3KRA9 ALKB6_HUMAN 1 238 SEQADV 7VJV GLY A 239 UNP Q3KRA9 EXPRESSION TAG SEQADV 7VJV THR A 240 UNP Q3KRA9 EXPRESSION TAG SEQADV 7VJV GLU A 241 UNP Q3KRA9 EXPRESSION TAG SEQADV 7VJV ASN A 242 UNP Q3KRA9 EXPRESSION TAG SEQADV 7VJV LEU A 243 UNP Q3KRA9 EXPRESSION TAG SEQADV 7VJV TYR A 244 UNP Q3KRA9 EXPRESSION TAG SEQADV 7VJV PHE A 245 UNP Q3KRA9 EXPRESSION TAG SEQADV 7VJV GLN A 246 UNP Q3KRA9 EXPRESSION TAG SEQRES 1 A 246 MET GLU GLU GLN ASP ALA ARG VAL PRO ALA LEU GLU PRO SEQRES 2 A 246 PHE ARG VAL GLU GLN ALA PRO PRO VAL ILE TYR TYR VAL SEQRES 3 A 246 PRO ASP PHE ILE SER LYS GLU GLU GLU GLU TYR LEU LEU SEQRES 4 A 246 ARG GLN VAL PHE ASN ALA PRO LYS PRO LYS TRP THR GLN SEQRES 5 A 246 LEU SER GLY ARG LYS LEU GLN ASN TRP GLY GLY LEU PRO SEQRES 6 A 246 HIS PRO ARG GLY MET VAL PRO GLU ARG LEU PRO PRO TRP SEQRES 7 A 246 LEU GLN ARG TYR VAL ASP LYS VAL SER ASN LEU SER LEU SEQRES 8 A 246 PHE GLY GLY LEU PRO ALA ASN HIS VAL LEU VAL ASN GLN SEQRES 9 A 246 TYR LEU PRO GLY GLU GLY ILE MET PRO HIS GLU ASP GLY SEQRES 10 A 246 PRO LEU TYR TYR PRO THR VAL SER THR ILE SER LEU GLY SEQRES 11 A 246 SER HIS THR VAL LEU ASP PHE TYR GLU PRO ARG ARG PRO SEQRES 12 A 246 GLU ASP ASP ASP PRO THR GLU GLN PRO ARG PRO PRO PRO SEQRES 13 A 246 ARG PRO THR THR SER LEU LEU LEU GLU PRO ARG SER LEU SEQRES 14 A 246 LEU VAL LEU ARG GLY PRO ALA TYR THR ARG LEU LEU HIS SEQRES 15 A 246 GLY ILE ALA ALA ALA ARG VAL ASP ALA LEU ASP ALA ALA SEQRES 16 A 246 SER SER PRO PRO ASN ALA ALA ALA CYS PRO SER ALA ARG SEQRES 17 A 246 PRO GLY ALA CYS LEU VAL ARG GLY THR ARG VAL SER LEU SEQRES 18 A 246 THR ILE ARG ARG VAL PRO ARG VAL LEU ARG ALA GLY LEU SEQRES 19 A 246 LEU LEU GLY LYS GLY THR GLU ASN LEU TYR PHE GLN HET MN A 301 1 HET AKG A 302 10 HETNAM MN MANGANESE (II) ION HETNAM AKG 2-OXOGLUTARIC ACID FORMUL 2 MN MN 2+ FORMUL 3 AKG C5 H6 O5 FORMUL 4 HOH *86(H2 O) HELIX 1 AA1 MET A 1 ARG A 7 1 7 HELIX 2 AA2 VAL A 8 ARG A 15 5 8 HELIX 3 AA3 SER A 31 ASN A 44 1 14 HELIX 4 AA4 PRO A 46 PRO A 48 5 3 HELIX 5 AA5 PRO A 76 ASN A 88 1 13 HELIX 6 AA6 ARG A 142 ASP A 146 5 5 HELIX 7 AA7 GLY A 174 ARG A 179 1 6 SHEET 1 AA1 7 ILE A 23 VAL A 26 0 SHEET 2 AA1 7 LEU A 169 ARG A 173 -1 O LEU A 169 N VAL A 26 SHEET 3 AA1 7 THR A 123 LEU A 129 -1 N THR A 126 O LEU A 170 SHEET 4 AA1 7 ARG A 218 ARG A 224 -1 O ILE A 223 N SER A 125 SHEET 5 AA1 7 HIS A 99 TYR A 105 -1 N TYR A 105 O ARG A 218 SHEET 6 AA1 7 LYS A 57 TRP A 61 -1 N LYS A 57 O GLN A 104 SHEET 7 AA1 7 TRP A 50 GLN A 52 -1 N THR A 51 O LEU A 58 SHEET 1 AA2 4 ILE A 111 HIS A 114 0 SHEET 2 AA2 4 LEU A 181 ILE A 184 -1 O HIS A 182 N HIS A 114 SHEET 3 AA2 4 THR A 133 TYR A 138 -1 N ASP A 136 O GLY A 183 SHEET 4 AA2 4 THR A 160 LEU A 164 -1 O THR A 160 N PHE A 137 SHEET 1 AA3 2 VAL A 189 ALA A 191 0 SHEET 2 AA3 2 CYS A 212 VAL A 214 -1 O LEU A 213 N ASP A 190 LINK NE2 HIS A 114 MN MN A 301 1555 1555 2.08 LINK OD2 ASP A 116 MN MN A 301 1555 1555 2.07 LINK NE2 HIS A 182 MN MN A 301 1555 1555 2.06 LINK MN MN A 301 O1 AKG A 302 1555 1555 2.09 LINK MN MN A 301 O5 AKG A 302 1555 1555 2.06 LINK MN MN A 301 O HOH A 402 1555 1555 2.18 CISPEP 1 PRO A 21 VAL A 22 0 -6.64 CRYST1 46.118 64.407 88.416 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021684 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015526 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011310 0.00000 TER 1706 LYS A 238 HETATM 1707 MN MN A 301 11.819 -4.041 -3.450 1.00 12.45 MN0 HETATM 1708 C1 AKG A 302 14.338 -3.724 -2.283 1.00 18.24 C0 HETATM 1709 O1 AKG A 302 13.149 -3.779 -1.859 1.00 17.24 O0 HETATM 1710 O2 AKG A 302 15.326 -3.574 -1.494 1.00 19.50 O0 HETATM 1711 C2 AKG A 302 14.564 -3.790 -3.623 1.00 17.52 C0 HETATM 1712 O5 AKG A 302 13.640 -4.158 -4.406 1.00 16.93 O0 HETATM 1713 C3 AKG A 302 15.883 -3.401 -4.234 1.00 16.44 C0 HETATM 1714 C4 AKG A 302 15.855 -3.174 -5.730 1.00 17.69 C0 HETATM 1715 C5 AKG A 302 17.093 -2.545 -6.333 1.00 16.71 C0 HETATM 1716 O3 AKG A 302 16.926 -1.764 -7.292 1.00 18.29 O0 HETATM 1717 O4 AKG A 302 18.195 -2.821 -5.837 1.00 15.29 O0 HETATM 1718 O HOH A 401 26.180 -6.573 -9.614 1.00 21.91 O0 HETATM 1719 O HOH A 402 12.046 -1.910 -3.871 1.00 15.85 O0 HETATM 1720 O HOH A 403 26.940 -7.411 -1.728 1.00 22.68 O0 HETATM 1721 O HOH A 404 22.239 0.008 8.447 1.00 24.86 O0 HETATM 1722 O HOH A 405 -0.560 12.370 2.342 1.00 24.88 O0 HETATM 1723 O HOH A 406 31.946 1.284 4.577 1.00 29.77 O0 HETATM 1724 O HOH A 407 15.745 2.937 13.791 1.00 22.75 O0 HETATM 1725 O HOH A 408 13.865 9.229 8.962 1.00 20.12 O0 HETATM 1726 O HOH A 409 7.429 2.040 10.441 1.00 17.05 O0 HETATM 1727 O HOH A 410 21.038 15.285 -10.211 1.00 30.24 O0 HETATM 1728 O HOH A 411 33.434 14.357 1.219 1.00 27.11 O0 HETATM 1729 O HOH A 412 29.501 -10.261 -13.883 1.00 26.92 O0 HETATM 1730 O HOH A 413 2.003 0.533 1.012 1.00 25.85 O0 HETATM 1731 O HOH A 414 12.244 -3.302 0.570 1.00 23.56 O0 HETATM 1732 O HOH A 415 28.650 3.749 -13.481 1.00 25.53 O0 HETATM 1733 O HOH A 416 16.600 0.913 -19.758 1.00 22.02 O0 HETATM 1734 O HOH A 417 11.921 5.979 -19.976 1.00 21.50 O0 HETATM 1735 O HOH A 418 13.965 -11.995 -10.727 1.00 23.51 O0 HETATM 1736 O HOH A 419 11.997 7.286 18.508 1.00 16.37 O0 HETATM 1737 O HOH A 420 30.306 8.083 4.457 1.00 25.16 O0 HETATM 1738 O HOH A 421 -2.800 4.861 -6.713 1.00 30.50 O0 HETATM 1739 O HOH A 422 6.332 -4.331 -6.868 1.00 17.61 O0 HETATM 1740 O HOH A 423 12.910 1.476 14.314 1.00 18.51 O0 HETATM 1741 O HOH A 424 26.245 13.174 -5.159 1.00 15.45 O0 HETATM 1742 O HOH A 425 17.362 3.051 -11.338 1.00 12.73 O0 HETATM 1743 O HOH A 426 6.514 -3.330 4.138 1.00 20.81 O0 HETATM 1744 O HOH A 427 0.798 3.963 -5.471 1.00 17.95 O0 HETATM 1745 O HOH A 428 18.300 -0.035 -2.861 1.00 17.73 O0 HETATM 1746 O HOH A 429 5.573 2.510 8.339 1.00 16.84 O0 HETATM 1747 O HOH A 430 18.709 15.599 6.774 1.00 25.26 O0 HETATM 1748 O HOH A 431 24.620 -9.077 -9.870 1.00 21.66 O0 HETATM 1749 O HOH A 432 -3.035 -20.708 -0.713 1.00 27.85 O0 HETATM 1750 O HOH A 433 21.910 -12.841 -4.293 1.00 22.65 O0 HETATM 1751 O HOH A 434 7.417 5.200 -0.323 1.00 13.08 O0 HETATM 1752 O HOH A 435 17.284 -9.921 -13.194 1.00 17.83 O0 HETATM 1753 O HOH A 436 15.138 -4.768 0.943 1.00 22.91 O0 HETATM 1754 O HOH A 437 13.707 3.057 1.603 1.00 12.61 O0 HETATM 1755 O HOH A 438 13.477 17.124 -8.657 1.00 26.23 O0 HETATM 1756 O HOH A 439 27.134 -9.530 -0.165 1.00 27.57 O0 HETATM 1757 O HOH A 440 21.641 -0.243 -12.376 1.00 14.59 O0 HETATM 1758 O HOH A 441 24.366 10.750 -16.221 1.00 23.06 O0 HETATM 1759 O HOH A 442 3.332 -3.891 -1.899 1.00 22.37 O0 HETATM 1760 O HOH A 443 1.008 0.886 -18.032 1.00 27.87 O0 HETATM 1761 O HOH A 444 29.359 -5.608 -20.647 1.00 30.99 O0 HETATM 1762 O HOH A 445 25.771 13.113 -2.426 1.00 16.44 O0 HETATM 1763 O HOH A 446 20.440 7.716 9.012 1.00 26.13 O0 HETATM 1764 O HOH A 447 5.427 13.673 -1.670 1.00 17.34 O0 HETATM 1765 O HOH A 448 13.384 14.039 4.367 1.00 29.78 O0 HETATM 1766 O HOH A 449 7.790 12.313 5.821 1.00 23.48 O0 HETATM 1767 O HOH A 450 14.358 -0.701 -7.651 1.00 18.59 O0 HETATM 1768 O HOH A 451 10.117 11.777 15.089 1.00 31.31 O0 HETATM 1769 O HOH A 452 27.123 -2.274 -16.656 1.00 25.48 O0 HETATM 1770 O HOH A 453 5.498 16.455 -1.926 1.00 23.69 O0 HETATM 1771 O HOH A 454 14.367 8.415 18.967 1.00 25.59 O0 HETATM 1772 O HOH A 455 2.361 11.307 -4.527 1.00 15.38 O0 HETATM 1773 O HOH A 456 11.320 -3.668 4.326 1.00 25.07 O0 HETATM 1774 O HOH A 457 12.320 17.551 0.774 1.00 28.64 O0 HETATM 1775 O HOH A 458 3.928 1.928 -16.593 1.00 18.70 O0 HETATM 1776 O HOH A 459 6.340 -3.335 -4.247 1.00 18.05 O0 HETATM 1777 O HOH A 460 20.736 -1.987 8.587 1.00 29.86 O0 HETATM 1778 O HOH A 461 20.864 6.551 -16.762 1.00 18.15 O0 HETATM 1779 O HOH A 462 7.446 0.721 -22.735 1.00 30.05 O0 HETATM 1780 O HOH A 463 3.134 1.394 7.846 1.00 30.10 O0 HETATM 1781 O HOH A 464 19.422 -10.824 -1.709 1.00 21.87 O0 HETATM 1782 O HOH A 465 3.854 16.140 -11.643 1.00 25.68 O0 HETATM 1783 O HOH A 466 2.958 13.816 -8.220 1.00 23.94 O0 HETATM 1784 O HOH A 467 20.392 -13.091 -19.709 1.00 29.83 O0 HETATM 1785 O HOH A 468 -1.562 2.835 -4.983 1.00 28.76 O0 HETATM 1786 O HOH A 469 6.734 -10.011 -0.869 1.00 26.25 O0 HETATM 1787 O HOH A 470 6.126 15.867 -10.414 1.00 32.05 O0 HETATM 1788 O HOH A 471 17.763 -13.504 -6.685 1.00 24.56 O0 HETATM 1789 O HOH A 472 11.105 1.008 19.320 1.00 22.08 O0 HETATM 1790 O HOH A 473 14.422 19.385 -7.265 1.00 27.23 O0 HETATM 1791 O HOH A 474 19.131 3.946 10.071 1.00 25.04 O0 HETATM 1792 O HOH A 475 14.863 -12.714 -8.392 1.00 23.79 O0 HETATM 1793 O HOH A 476 29.568 14.803 -14.069 1.00 32.99 O0 HETATM 1794 O HOH A 477 6.062 10.344 6.699 1.00 22.94 O0 HETATM 1795 O HOH A 478 17.119 -12.301 -1.858 1.00 20.38 O0 HETATM 1796 O HOH A 479 23.876 -5.536 -11.029 1.00 28.01 O0 HETATM 1797 O HOH A 480 27.524 13.307 -16.292 1.00 30.81 O0 HETATM 1798 O HOH A 481 9.691 11.388 9.167 1.00 24.49 O0 HETATM 1799 O HOH A 482 12.268 -2.033 -6.567 1.00 23.78 O0 HETATM 1800 O HOH A 483 21.508 -5.599 -8.997 1.00 22.90 O0 HETATM 1801 O HOH A 484 0.134 6.633 -5.717 1.00 36.97 O0 HETATM 1802 O HOH A 485 11.582 10.522 10.089 1.00 29.38 O0 HETATM 1803 O HOH A 486 -0.355 11.752 -4.569 1.00 23.92 O0 CONECT 917 1707 CONECT 934 1707 CONECT 1418 1707 CONECT 1707 917 934 1418 1709 CONECT 1707 1712 1719 CONECT 1708 1709 1710 1711 CONECT 1709 1707 1708 CONECT 1710 1708 CONECT 1711 1708 1712 1713 CONECT 1712 1707 1711 CONECT 1713 1711 1714 CONECT 1714 1713 1715 CONECT 1715 1714 1716 1717 CONECT 1716 1715 CONECT 1717 1715 CONECT 1719 1707 MASTER 322 0 2 7 13 0 0 6 1802 1 16 19 END