HEADER VIRAL PROTEIN 02-OCT-21 7VLH TITLE CRYSTAL STRUCTURE OF ZIKA NS2B-NS3 PROTEASE WITH COMPOUND MI2219 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE PROTEASE SUBUNIT NS2B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NS2B COFACTOR; COMPND 5 EC: 3.4.21.91,3.6.1.15,3.6.4.13,2.1.1.56,2.1.1.57,2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NS3 PROTEASE; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 3 ORGANISM_COMMON: ZIKV; SOURCE 4 ORGANISM_TAXID: 64320; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ZIKA VIRUS (STRAIN MR 766); SOURCE 9 ORGANISM_COMMON: ZIKV; SOURCE 10 ORGANISM_TAXID: 64320; SOURCE 11 STRAIN: MR 766; SOURCE 12 GENE: GP1, A2G93_63394GPGP1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NS3 PROTEASE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.P.QUEK REVDAT 2 29-NOV-23 7VLH 1 REMARK REVDAT 1 10-AUG-22 7VLH 0 JRNL AUTH S.HUBER,N.J.BRAUN,L.C.SCHMACKE,J.P.QUEK,R.MURRA,D.BENDER, JRNL AUTH 2 E.HILDT,D.LUO,A.HEINE,T.STEINMETZER JRNL TITL STRUCTURE-BASED OPTIMIZATION AND CHARACTERIZATION OF JRNL TITL 2 MACROCYCLIC ZIKA VIRUS NS2B-NS3 PROTEASE INHIBITORS. JRNL REF J.MED.CHEM. V. 65 6555 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 35475620 JRNL DOI 10.1021/ACS.JMEDCHEM.1C01860 REMARK 2 REMARK 2 RESOLUTION. 2.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 6087 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 305 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.7150 - 2.6210 0.00 0 0 0.3474 0.3619 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1005 9.1803 -17.8451 REMARK 3 T TENSOR REMARK 3 T11: 0.6127 T22: 0.7748 REMARK 3 T33: 0.4378 T12: -0.1111 REMARK 3 T13: -0.0233 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 5.3712 L22: 5.3542 REMARK 3 L33: 5.5826 L12: 3.7328 REMARK 3 L13: 2.4033 L23: 2.4394 REMARK 3 S TENSOR REMARK 3 S11: -0.3611 S12: -0.0347 S13: -0.0287 REMARK 3 S21: -0.7554 S22: 0.0834 S23: 0.4049 REMARK 3 S31: -0.4009 S32: -1.3733 S33: 0.0973 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0691 -5.6444 -31.9606 REMARK 3 T TENSOR REMARK 3 T11: 0.8839 T22: 0.8345 REMARK 3 T33: 0.4188 T12: -0.2128 REMARK 3 T13: -0.0666 T23: -0.1149 REMARK 3 L TENSOR REMARK 3 L11: 5.5101 L22: 8.3284 REMARK 3 L33: 6.6194 L12: 1.7867 REMARK 3 L13: -0.0142 L23: -7.1631 REMARK 3 S TENSOR REMARK 3 S11: -0.1347 S12: -0.2536 S13: 1.6671 REMARK 3 S21: 0.0843 S22: -0.0200 S23: -0.0394 REMARK 3 S31: 1.7993 S32: 1.3178 S33: 0.2292 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.1334 -7.7118 -26.9836 REMARK 3 T TENSOR REMARK 3 T11: 1.0183 T22: 1.2810 REMARK 3 T33: 0.6717 T12: -0.2460 REMARK 3 T13: 0.2815 T23: -0.1736 REMARK 3 L TENSOR REMARK 3 L11: 5.6927 L22: 7.3049 REMARK 3 L33: 5.7535 L12: -2.8767 REMARK 3 L13: 5.5139 L23: -1.5140 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: 2.0086 S13: 0.5021 REMARK 3 S21: -2.1031 S22: 0.9691 S23: -1.7070 REMARK 3 S31: -1.3711 S32: 1.0212 S33: -0.5983 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7352 -5.8001 -7.2183 REMARK 3 T TENSOR REMARK 3 T11: 0.6495 T22: 0.8036 REMARK 3 T33: 0.6209 T12: -0.0175 REMARK 3 T13: -0.1478 T23: -0.0560 REMARK 3 L TENSOR REMARK 3 L11: 8.9997 L22: 7.8202 REMARK 3 L33: 4.0053 L12: -3.9445 REMARK 3 L13: -5.8199 L23: 1.6215 REMARK 3 S TENSOR REMARK 3 S11: -0.6943 S12: -0.9872 S13: 0.7076 REMARK 3 S21: 0.5228 S22: 1.0545 S23: -0.5322 REMARK 3 S31: 1.5686 S32: 0.0640 S33: -0.8482 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 18 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.7188 6.9970 -14.3517 REMARK 3 T TENSOR REMARK 3 T11: 0.5645 T22: 0.6708 REMARK 3 T33: 0.3622 T12: -0.0544 REMARK 3 T13: -0.0133 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 3.7921 L22: 9.6957 REMARK 3 L33: 2.3871 L12: 3.2478 REMARK 3 L13: -1.7070 L23: -3.9725 REMARK 3 S TENSOR REMARK 3 S11: 0.1060 S12: 0.2700 S13: 0.1504 REMARK 3 S21: 0.4489 S22: 0.1321 S23: 0.2324 REMARK 3 S31: 0.0868 S32: -0.2485 S33: -0.1596 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.5331 10.8686 -7.5499 REMARK 3 T TENSOR REMARK 3 T11: 0.8582 T22: 0.7453 REMARK 3 T33: 0.7404 T12: -0.0329 REMARK 3 T13: 0.1322 T23: -0.1246 REMARK 3 L TENSOR REMARK 3 L11: 2.0793 L22: 3.5519 REMARK 3 L33: 6.8617 L12: -0.4462 REMARK 3 L13: 0.4402 L23: 0.2329 REMARK 3 S TENSOR REMARK 3 S11: -0.3655 S12: -1.2442 S13: 1.4395 REMARK 3 S21: 0.7039 S22: 0.4075 S23: 0.2699 REMARK 3 S31: -1.0073 S32: -1.1001 S33: 0.0743 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2142 -3.1699 -14.6088 REMARK 3 T TENSOR REMARK 3 T11: 0.4095 T22: 0.4573 REMARK 3 T33: 0.4084 T12: -0.1207 REMARK 3 T13: -0.0405 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 2.9859 L22: 1.0212 REMARK 3 L33: 3.7907 L12: -0.8189 REMARK 3 L13: 0.2609 L23: 0.4567 REMARK 3 S TENSOR REMARK 3 S11: -0.1872 S12: -0.0981 S13: -0.0443 REMARK 3 S21: 0.0981 S22: 0.1670 S23: 0.0081 REMARK 3 S31: 0.3571 S32: -0.0498 S33: -0.0023 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0692 -8.5037 -22.9093 REMARK 3 T TENSOR REMARK 3 T11: 0.5117 T22: 0.6063 REMARK 3 T33: 0.5532 T12: -0.1459 REMARK 3 T13: -0.0804 T23: -0.0730 REMARK 3 L TENSOR REMARK 3 L11: 5.5828 L22: 7.0168 REMARK 3 L33: 3.7584 L12: -4.2222 REMARK 3 L13: 2.6471 L23: -3.9816 REMARK 3 S TENSOR REMARK 3 S11: -0.6779 S12: -0.8932 S13: 0.7517 REMARK 3 S21: -0.0550 S22: 0.3007 S23: -1.8095 REMARK 3 S31: 0.0889 S32: -0.9760 S33: 0.2006 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 119 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4335 -3.1602 -18.2215 REMARK 3 T TENSOR REMARK 3 T11: 0.3879 T22: 0.6199 REMARK 3 T33: 0.2640 T12: -0.1278 REMARK 3 T13: 0.0624 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 6.3414 L22: 7.6395 REMARK 3 L33: 2.5480 L12: -0.7815 REMARK 3 L13: 2.1136 L23: 1.2164 REMARK 3 S TENSOR REMARK 3 S11: -0.3123 S12: -0.6824 S13: -0.4276 REMARK 3 S21: 0.8454 S22: 0.1801 S23: 0.0818 REMARK 3 S31: 0.1910 S32: 0.8555 S33: 0.1757 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 140 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4881 -4.5509 -19.5569 REMARK 3 T TENSOR REMARK 3 T11: 0.6153 T22: 0.6833 REMARK 3 T33: 0.4303 T12: -0.0928 REMARK 3 T13: 0.0766 T23: -0.0546 REMARK 3 L TENSOR REMARK 3 L11: 6.6945 L22: 3.5105 REMARK 3 L33: 1.5171 L12: 0.6756 REMARK 3 L13: 2.6560 L23: 0.8365 REMARK 3 S TENSOR REMARK 3 S11: 0.1649 S12: 1.0747 S13: -0.4383 REMARK 3 S21: 0.2016 S22: 0.0714 S23: -0.2065 REMARK 3 S31: 0.0259 S32: 0.2366 S33: -0.2433 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 164 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2464 -8.1350 -12.1123 REMARK 3 T TENSOR REMARK 3 T11: 0.4994 T22: 0.7526 REMARK 3 T33: 0.6524 T12: -0.1501 REMARK 3 T13: 0.0491 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 9.2903 L22: 2.8340 REMARK 3 L33: 7.8274 L12: 3.8928 REMARK 3 L13: 2.8452 L23: -1.0980 REMARK 3 S TENSOR REMARK 3 S11: 1.2347 S12: -1.7054 S13: -0.4784 REMARK 3 S21: 1.4929 S22: -0.4538 S23: 1.3082 REMARK 3 S31: 0.9624 S32: -0.7526 S33: -1.0048 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VLH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300024888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6110 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.620 REMARK 200 RESOLUTION RANGE LOW (A) : 40.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5GPI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.21750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 160.82625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.60875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 107.21750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.60875 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 160.82625 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 44 REMARK 465 THR A 45 REMARK 465 GLY A 46 REMARK 465 LYS A 47 REMARK 465 SER A 48 REMARK 465 VAL A 49 REMARK 465 GLU A 88 REMARK 465 GLU A 89 REMARK 465 ASP A 90 REMARK 465 GLY A 91 REMARK 465 PRO A 92 REMARK 465 PRO A 93 REMARK 465 MET A 94 REMARK 465 ARG A 95 REMARK 465 GLU A 96 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 LEU B 4 REMARK 465 TRP B 5 REMARK 465 ASP B 6 REMARK 465 VAL B 7 REMARK 465 PRO B 8 REMARK 465 ALA B 9 REMARK 465 PRO B 10 REMARK 465 LYS B 11 REMARK 465 GLU B 12 REMARK 465 VAL B 13 REMARK 465 LYS B 14 REMARK 465 LYS B 15 REMARK 465 GLY B 16 REMARK 465 GLU B 17 REMARK 465 GLU B 171 REMARK 465 GLU B 172 REMARK 465 GLU B 173 REMARK 465 THR B 174 REMARK 465 PRO B 175 REMARK 465 VAL B 176 REMARK 465 GLU B 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 54 CG CD OE1 OE2 REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 ASP A 64 CG OD1 OD2 REMARK 470 GLU A 66 CG CD OE1 OE2 REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 THR B 18 OG1 CG2 REMARK 470 ARG B 28 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 29 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 30 CG CD1 CD2 REMARK 470 LEU B 31 CG CD1 CD2 REMARK 470 ARG B 59 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 62 CG CD OE1 OE2 REMARK 470 ARG B 64 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 86 CG OD1 OD2 REMARK 470 ARG B 105 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 107 CG CD CE NZ REMARK 470 LYS B 117 CG CD CE NZ REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 LYS B 142 CG CD CE NZ REMARK 470 ILE B 156 CG1 CG2 CD1 REMARK 470 LYS B 157 CG CD CE NZ REMARK 470 ASN B 158 CG OD1 ND2 REMARK 470 LYS B 169 CG CD CE NZ REMARK 470 ARG B 170 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 94 NE2 GLN B 110 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU B 30 -142.47 -99.92 REMARK 500 LEU B 92 -54.07 -144.51 REMARK 500 ASN B 158 15.00 -69.91 REMARK 500 REMARK 500 REMARK: NULL DBREF 7VLH A 46 96 UNP Q32ZE1 POLG_ZIKV 1414 1464 DBREF1 7VLH B 1 177 UNP A0A142IX72_ZIKV DBREF2 7VLH B A0A142IX72 1497 1673 SEQADV 7VLH MET A 44 UNP Q32ZE1 INITIATING METHIONINE SEQADV 7VLH THR A 45 UNP Q32ZE1 EXPRESSION TAG SEQADV 7VLH GLY B 0 UNP A0A142IX7 EXPRESSION TAG SEQRES 1 A 53 MET THR GLY LYS SER VAL ASP MET TYR ILE GLU ARG ALA SEQRES 2 A 53 GLY ASP ILE THR TRP GLU LYS ASP ALA GLU VAL THR GLY SEQRES 3 A 53 ASN SER PRO ARG LEU ASP VAL ALA LEU ASP GLU SER GLY SEQRES 4 A 53 ASP PHE SER LEU VAL GLU GLU ASP GLY PRO PRO MET ARG SEQRES 5 A 53 GLU SEQRES 1 B 178 GLY SER GLY ALA LEU TRP ASP VAL PRO ALA PRO LYS GLU SEQRES 2 B 178 VAL LYS LYS GLY GLU THR THR ASP GLY VAL TYR ARG VAL SEQRES 3 B 178 MET THR ARG ARG LEU LEU GLY SER THR GLN VAL GLY VAL SEQRES 4 B 178 GLY VAL MET GLN GLU GLY VAL PHE HIS THR MET TRP HIS SEQRES 5 B 178 VAL THR LYS GLY ALA ALA LEU ARG SER GLY GLU GLY ARG SEQRES 6 B 178 LEU ASP PRO TYR TRP GLY ASP VAL LYS GLN ASP LEU VAL SEQRES 7 B 178 SER TYR CYS GLY PRO TRP LYS LEU ASP ALA ALA TRP ASP SEQRES 8 B 178 GLY LEU SER GLU VAL GLN LEU LEU ALA VAL PRO PRO GLY SEQRES 9 B 178 GLU ARG ALA LYS ASN ILE GLN THR LEU PRO GLY ILE PHE SEQRES 10 B 178 LYS THR LYS ASP GLY ASP ILE GLY ALA VAL ALA LEU ASP SEQRES 11 B 178 TYR PRO ALA GLY THR SER GLY SER PRO ILE LEU ASP LYS SEQRES 12 B 178 CYS GLY ARG VAL ILE GLY LEU TYR GLY ASN GLY VAL VAL SEQRES 13 B 178 ILE LYS ASN GLY SER TYR VAL SER ALA ILE THR GLN GLY SEQRES 14 B 178 LYS ARG GLU GLU GLU THR PRO VAL GLU HET 7Q3 B 201 86 HET SO4 B 202 5 HETNAM 7Q3 1-[(3~{S},6~{R},18~{R})-3,6-BIS(4-AZANYLBUTYL)-2,5,8, HETNAM 2 7Q3 11,14,17-HEXAKIS(OXIDANYLIDENE)-1,4,7,10,13,16- HETNAM 3 7Q3 HEXAZACYCLODOCOS-18-YL]GUANIDINE HETNAM SO4 SULFATE ION FORMUL 3 7Q3 C25 H47 N11 O6 FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *3(H2 O) HELIX 1 AA1 MET B 49 LYS B 54 1 6 HELIX 2 AA2 PRO B 131 SER B 135 5 5 SHEET 1 AA1 8 ARG B 64 LEU B 65 0 SHEET 2 AA1 8 LEU B 58 ARG B 59 -1 N LEU B 58 O LEU B 65 SHEET 3 AA1 8 MET A 51 GLY A 57 1 N MET A 51 O ARG B 59 SHEET 4 AA1 8 GLY B 21 THR B 27 -1 O MET B 26 N TYR A 52 SHEET 5 AA1 8 THR B 34 GLN B 42 -1 O GLY B 39 N TYR B 23 SHEET 6 AA1 8 VAL B 45 THR B 48 -1 O HIS B 47 N VAL B 40 SHEET 7 AA1 8 LEU B 76 TYR B 79 -1 O VAL B 77 N THR B 48 SHEET 8 AA1 8 PRO B 67 ASP B 71 -1 N TRP B 69 O SER B 78 SHEET 1 AA2 5 GLU A 66 VAL A 67 0 SHEET 2 AA2 5 LYS B 107 THR B 111 1 O GLN B 110 N GLU A 66 SHEET 3 AA2 5 VAL B 95 ALA B 99 -1 N VAL B 95 O THR B 111 SHEET 4 AA2 5 PRO B 138 LEU B 140 -1 O LEU B 140 N GLN B 96 SHEET 5 AA2 5 VAL B 146 LEU B 149 -1 O ILE B 147 N ILE B 139 SHEET 1 AA3 6 PHE A 84 LEU A 86 0 SHEET 2 AA3 6 ARG A 73 LEU A 78 -1 N ALA A 77 O SER A 85 SHEET 3 AA3 6 GLY B 114 THR B 118 1 O LYS B 117 N LEU A 74 SHEET 4 AA3 6 GLY B 121 VAL B 126 -1 O ALA B 125 N GLY B 114 SHEET 5 AA3 6 VAL B 162 ALA B 164 -1 O SER B 163 N VAL B 126 SHEET 6 AA3 6 GLY B 153 VAL B 154 -1 N VAL B 154 O VAL B 162 SSBOND 1 CYS B 143 CYS B 143 1555 8444 2.04 CRYST1 40.992 40.992 214.435 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024395 0.000000 0.000000 0.00000 SCALE2 0.000000 0.024395 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004663 0.00000