HEADER VIRAL PROTEIN 02-OCT-21 7VLI TITLE CRYSTAL STRUCTURE OF ZIKA NS2B-NS3 PROTEASE WITH COMPOUND MI2220 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE PROTEASE SUBUNIT NS2B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NS2B COFACTOR; COMPND 5 EC: 3.4.21.91,3.6.1.15,3.6.4.13,2.1.1.56,2.1.1.57,2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NS3 PROTEASE; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 3 ORGANISM_COMMON: ZIKV; SOURCE 4 ORGANISM_TAXID: 64320; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ZIKA VIRUS (STRAIN MR 766); SOURCE 9 ORGANISM_COMMON: ZIKV; SOURCE 10 ORGANISM_TAXID: 64320; SOURCE 11 STRAIN: MR 766; SOURCE 12 GENE: GP1, A2G93_63394GPGP1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NS3 PROTEASE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.P.QUEK REVDAT 2 29-NOV-23 7VLI 1 REMARK REVDAT 1 10-AUG-22 7VLI 0 JRNL AUTH S.HUBER,N.J.BRAUN,L.C.SCHMACKE,J.P.QUEK,R.MURRA,D.BENDER, JRNL AUTH 2 E.HILDT,D.LUO,A.HEINE,T.STEINMETZER JRNL TITL STRUCTURE-BASED OPTIMIZATION AND CHARACTERIZATION OF JRNL TITL 2 MACROCYCLIC ZIKA VIRUS NS2B-NS3 PROTEASE INHIBITORS. JRNL REF J.MED.CHEM. V. 65 6555 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 35475620 JRNL DOI 10.1021/ACS.JMEDCHEM.1C01860 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 8579 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.4700 - 2.3851 0.99 0 0 0.3885 0.4422 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.3545 15.0197 -13.9681 REMARK 3 T TENSOR REMARK 3 T11: 0.9998 T22: 0.5303 REMARK 3 T33: 0.8237 T12: 0.1897 REMARK 3 T13: 0.1877 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 1.8854 L22: 0.6035 REMARK 3 L33: 2.1844 L12: -0.2048 REMARK 3 L13: -0.1626 L23: 0.1243 REMARK 3 S TENSOR REMARK 3 S11: 0.3467 S12: 0.5128 S13: 1.8175 REMARK 3 S21: -0.4822 S22: -1.0371 S23: -0.2740 REMARK 3 S31: -0.4921 S32: -0.5653 S33: -0.0801 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.3205 4.6001 -24.0787 REMARK 3 T TENSOR REMARK 3 T11: 0.6124 T22: 0.5938 REMARK 3 T33: 0.6677 T12: 0.0338 REMARK 3 T13: 0.0111 T23: 0.0608 REMARK 3 L TENSOR REMARK 3 L11: 4.6960 L22: 0.1593 REMARK 3 L33: 6.2267 L12: -0.3185 REMARK 3 L13: 1.3760 L23: -0.9572 REMARK 3 S TENSOR REMARK 3 S11: -0.4976 S12: -0.5572 S13: -0.1533 REMARK 3 S21: 1.5685 S22: 0.3632 S23: 1.2804 REMARK 3 S31: 0.6963 S32: -0.5987 S33: -0.4357 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.2123 -4.6611 -31.9850 REMARK 3 T TENSOR REMARK 3 T11: 0.8889 T22: 0.9729 REMARK 3 T33: 0.4774 T12: 0.1093 REMARK 3 T13: -0.1841 T23: -0.1931 REMARK 3 L TENSOR REMARK 3 L11: 6.6692 L22: 3.2456 REMARK 3 L33: 2.8083 L12: 2.8848 REMARK 3 L13: 4.0838 L23: 1.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.2430 S12: 0.7866 S13: 1.8728 REMARK 3 S21: -1.6262 S22: 1.0142 S23: -0.2750 REMARK 3 S31: 0.6046 S32: 0.3047 S33: 1.9941 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3441 -3.1174 -33.2528 REMARK 3 T TENSOR REMARK 3 T11: 1.0857 T22: 0.7742 REMARK 3 T33: 0.6183 T12: 0.2120 REMARK 3 T13: 0.2096 T23: 0.1435 REMARK 3 L TENSOR REMARK 3 L11: 6.9211 L22: 4.3254 REMARK 3 L33: 9.2484 L12: 1.8160 REMARK 3 L13: 1.8192 L23: 6.3166 REMARK 3 S TENSOR REMARK 3 S11: -1.0707 S12: 2.9548 S13: 2.2357 REMARK 3 S21: -1.9749 S22: -0.1653 S23: -1.0212 REMARK 3 S31: -1.7276 S32: -0.1689 S33: -0.0961 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3721 -9.7862 -22.5231 REMARK 3 T TENSOR REMARK 3 T11: 0.5374 T22: 0.6156 REMARK 3 T33: 0.9205 T12: 0.0743 REMARK 3 T13: 0.2670 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 3.5396 L22: 4.1952 REMARK 3 L33: 1.3845 L12: -3.1328 REMARK 3 L13: -0.6668 L23: 0.8035 REMARK 3 S TENSOR REMARK 3 S11: 1.1217 S12: 0.4227 S13: 1.7498 REMARK 3 S21: -1.0420 S22: -0.7965 S23: 0.2171 REMARK 3 S31: 0.1887 S32: 0.0134 S33: -0.0786 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6267 -4.8594 -7.4935 REMARK 3 T TENSOR REMARK 3 T11: 0.5364 T22: 0.7726 REMARK 3 T33: 0.5339 T12: 0.0616 REMARK 3 T13: 0.0328 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 8.1958 L22: 5.2604 REMARK 3 L33: 4.3172 L12: -2.4444 REMARK 3 L13: -0.9283 L23: 4.1102 REMARK 3 S TENSOR REMARK 3 S11: 0.0044 S12: -1.0786 S13: 0.0880 REMARK 3 S21: 0.8482 S22: 0.2588 S23: -1.0684 REMARK 3 S31: 0.7044 S32: 0.2409 S33: -0.4151 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 17 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.9313 8.8761 -17.7186 REMARK 3 T TENSOR REMARK 3 T11: 0.6690 T22: 0.5496 REMARK 3 T33: 0.5530 T12: 0.1243 REMARK 3 T13: -0.0349 T23: 0.0802 REMARK 3 L TENSOR REMARK 3 L11: 4.1520 L22: 5.3352 REMARK 3 L33: 3.8383 L12: 4.1786 REMARK 3 L13: 2.5758 L23: 3.2121 REMARK 3 S TENSOR REMARK 3 S11: 0.3769 S12: -0.3998 S13: 0.5413 REMARK 3 S21: -0.0193 S22: -0.5751 S23: 0.7202 REMARK 3 S31: 0.0031 S32: -0.3784 S33: 0.1969 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0734 12.7323 -15.7335 REMARK 3 T TENSOR REMARK 3 T11: 0.4402 T22: 0.5274 REMARK 3 T33: 0.4706 T12: 0.1022 REMARK 3 T13: 0.0752 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 4.8086 L22: 0.9733 REMARK 3 L33: 7.3803 L12: 0.1100 REMARK 3 L13: -1.3686 L23: -2.2594 REMARK 3 S TENSOR REMARK 3 S11: 0.2637 S12: -0.3085 S13: 1.0225 REMARK 3 S21: -0.1742 S22: -0.2169 S23: 0.3205 REMARK 3 S31: -0.6478 S32: 0.3695 S33: -0.2947 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.9898 3.4716 -10.2817 REMARK 3 T TENSOR REMARK 3 T11: 0.5222 T22: 0.5286 REMARK 3 T33: 0.4580 T12: 0.0892 REMARK 3 T13: 0.0270 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 7.4966 L22: 3.1240 REMARK 3 L33: 5.3352 L12: 1.9100 REMARK 3 L13: -1.0078 L23: -1.0293 REMARK 3 S TENSOR REMARK 3 S11: -0.1470 S12: -0.2645 S13: 0.2162 REMARK 3 S21: 0.1578 S22: 0.1494 S23: -0.0569 REMARK 3 S31: 0.2572 S32: 0.0933 S33: -0.1997 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.4687 12.4896 -8.1771 REMARK 3 T TENSOR REMARK 3 T11: 0.9324 T22: 0.5664 REMARK 3 T33: 0.8810 T12: -0.0073 REMARK 3 T13: 0.1888 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.7933 L22: 5.2430 REMARK 3 L33: 6.0204 L12: 2.2661 REMARK 3 L13: -2.7404 L23: -1.5810 REMARK 3 S TENSOR REMARK 3 S11: -0.3567 S12: 0.9325 S13: 1.0663 REMARK 3 S21: -0.0673 S22: 0.2935 S23: 0.5287 REMARK 3 S31: -0.2423 S32: -0.3174 S33: -0.5777 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 63 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0573 4.0973 -3.8062 REMARK 3 T TENSOR REMARK 3 T11: 0.5493 T22: 0.5680 REMARK 3 T33: 0.5235 T12: -0.0616 REMARK 3 T13: 0.0428 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 3.5940 L22: 3.0935 REMARK 3 L33: 5.4836 L12: 3.1715 REMARK 3 L13: -2.4555 L23: -0.4492 REMARK 3 S TENSOR REMARK 3 S11: 0.4335 S12: -0.1512 S13: 0.6768 REMARK 3 S21: 0.0350 S22: -0.2095 S23: 0.4390 REMARK 3 S31: -0.2627 S32: -0.1736 S33: -0.2907 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.6352 -5.8018 -12.6229 REMARK 3 T TENSOR REMARK 3 T11: 0.5213 T22: 0.4532 REMARK 3 T33: 0.4316 T12: 0.0241 REMARK 3 T13: 0.0032 T23: 0.1265 REMARK 3 L TENSOR REMARK 3 L11: 3.3624 L22: 1.8344 REMARK 3 L33: 4.0147 L12: -0.8189 REMARK 3 L13: -0.5566 L23: 2.8705 REMARK 3 S TENSOR REMARK 3 S11: 0.0058 S12: -0.1335 S13: -0.2656 REMARK 3 S21: -0.0731 S22: 0.0179 S23: 0.1422 REMARK 3 S31: 0.3581 S32: 0.0631 S33: -0.1432 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 95 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7819 4.5909 -26.0395 REMARK 3 T TENSOR REMARK 3 T11: 0.4481 T22: 0.5210 REMARK 3 T33: 0.4680 T12: 0.0885 REMARK 3 T13: -0.0290 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 3.1511 L22: 2.3120 REMARK 3 L33: 2.9268 L12: 0.7449 REMARK 3 L13: -2.6863 L23: -2.5958 REMARK 3 S TENSOR REMARK 3 S11: 0.3134 S12: 0.6096 S13: 0.1914 REMARK 3 S21: -1.0714 S22: -0.4315 S23: -0.4026 REMARK 3 S31: 0.0240 S32: -0.1143 S33: 0.0201 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2745 -7.6813 -23.1153 REMARK 3 T TENSOR REMARK 3 T11: 0.5610 T22: 0.4110 REMARK 3 T33: 0.4404 T12: 0.0995 REMARK 3 T13: 0.0260 T23: 0.0472 REMARK 3 L TENSOR REMARK 3 L11: 4.2016 L22: 3.6311 REMARK 3 L33: 0.9799 L12: 0.0126 REMARK 3 L13: -1.2817 L23: 1.6641 REMARK 3 S TENSOR REMARK 3 S11: -0.1975 S12: -0.2008 S13: -0.0669 REMARK 3 S21: -0.4267 S22: 0.1334 S23: -0.2795 REMARK 3 S31: 0.2338 S32: -0.3447 S33: 0.0954 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 119 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6155 -2.1941 -18.1780 REMARK 3 T TENSOR REMARK 3 T11: 0.4583 T22: 0.6137 REMARK 3 T33: 0.4954 T12: 0.1279 REMARK 3 T13: 0.1405 T23: 0.0820 REMARK 3 L TENSOR REMARK 3 L11: 3.2856 L22: 3.2431 REMARK 3 L33: 3.6644 L12: -0.9233 REMARK 3 L13: 1.6478 L23: 2.4325 REMARK 3 S TENSOR REMARK 3 S11: -0.0383 S12: 0.0551 S13: -0.1876 REMARK 3 S21: -0.3786 S22: -0.0653 S23: 0.1059 REMARK 3 S31: 0.2256 S32: 0.4665 S33: -0.0330 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.4960 -4.6725 -19.7024 REMARK 3 T TENSOR REMARK 3 T11: 0.5955 T22: 0.4727 REMARK 3 T33: 0.4351 T12: 0.0879 REMARK 3 T13: 0.0043 T23: -0.0341 REMARK 3 L TENSOR REMARK 3 L11: 5.8831 L22: 4.2869 REMARK 3 L33: 6.0205 L12: 0.8745 REMARK 3 L13: 0.4877 L23: 1.3158 REMARK 3 S TENSOR REMARK 3 S11: 0.3273 S12: 0.5072 S13: -0.1357 REMARK 3 S21: 0.0248 S22: -0.1918 S23: 0.2944 REMARK 3 S31: 0.1803 S32: -0.2792 S33: 0.0188 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 156 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3768 -2.8247 -17.8458 REMARK 3 T TENSOR REMARK 3 T11: 0.5821 T22: 0.6200 REMARK 3 T33: 0.3582 T12: 0.0563 REMARK 3 T13: 0.0503 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 6.8468 L22: 6.8983 REMARK 3 L33: 9.2348 L12: 0.1371 REMARK 3 L13: 0.0147 L23: 0.5726 REMARK 3 S TENSOR REMARK 3 S11: 0.5402 S12: 0.5964 S13: 0.2350 REMARK 3 S21: -0.1371 S22: -0.0865 S23: -0.3711 REMARK 3 S31: -0.5435 S32: 1.3019 S33: -0.4096 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VLI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300024889. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8604 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.385 REMARK 200 RESOLUTION RANGE LOW (A) : 41.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 24.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.47 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5GPI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.86700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 161.80050 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.93350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 107.86700 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.93350 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 161.80050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 44 REMARK 465 THR A 45 REMARK 465 GLY A 46 REMARK 465 LYS A 47 REMARK 465 SER A 48 REMARK 465 VAL A 49 REMARK 465 GLU A 88 REMARK 465 GLU A 89 REMARK 465 ASP A 90 REMARK 465 GLY A 91 REMARK 465 PRO A 92 REMARK 465 PRO A 93 REMARK 465 MET A 94 REMARK 465 ARG A 95 REMARK 465 GLU A 96 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 LEU B 4 REMARK 465 TRP B 5 REMARK 465 ASP B 6 REMARK 465 VAL B 7 REMARK 465 PRO B 8 REMARK 465 ALA B 9 REMARK 465 PRO B 10 REMARK 465 LYS B 11 REMARK 465 GLU B 12 REMARK 465 VAL B 13 REMARK 465 LYS B 14 REMARK 465 LYS B 15 REMARK 465 GLY B 16 REMARK 465 LYS B 169 REMARK 465 ARG B 170 REMARK 465 GLU B 171 REMARK 465 GLU B 172 REMARK 465 GLU B 173 REMARK 465 THR B 174 REMARK 465 PRO B 175 REMARK 465 VAL B 176 REMARK 465 GLU B 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 50 CG OD1 OD2 REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 ASP A 64 CG OD1 OD2 REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 17 CG CD OE1 OE2 REMARK 470 ARG B 28 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 29 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 59 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 62 CG CD OE1 OE2 REMARK 470 ARG B 64 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 105 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 107 CG CD CE NZ REMARK 470 LYS B 117 CG CD CE NZ REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 LYS B 142 CG CD CE NZ REMARK 470 LYS B 157 CG CD CE NZ REMARK 470 ASN B 158 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 64 56.69 -108.45 REMARK 500 THR B 18 22.41 -146.64 REMARK 500 LEU B 30 -158.95 -103.94 REMARK 500 ASP B 71 104.38 -160.28 REMARK 500 LEU B 92 -47.84 -137.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 160 TYR B 161 -149.41 REMARK 500 REMARK 500 REMARK: NULL DBREF 7VLI A 46 96 UNP Q32ZE1 POLG_ZIKV 1414 1464 DBREF1 7VLI B 1 177 UNP A0A142IX72_ZIKV DBREF2 7VLI B A0A142IX72 1497 1673 SEQADV 7VLI MET A 44 UNP Q32ZE1 INITIATING METHIONINE SEQADV 7VLI THR A 45 UNP Q32ZE1 EXPRESSION TAG SEQADV 7VLI GLY B 0 UNP A0A142IX7 EXPRESSION TAG SEQRES 1 A 53 MET THR GLY LYS SER VAL ASP MET TYR ILE GLU ARG ALA SEQRES 2 A 53 GLY ASP ILE THR TRP GLU LYS ASP ALA GLU VAL THR GLY SEQRES 3 A 53 ASN SER PRO ARG LEU ASP VAL ALA LEU ASP GLU SER GLY SEQRES 4 A 53 ASP PHE SER LEU VAL GLU GLU ASP GLY PRO PRO MET ARG SEQRES 5 A 53 GLU SEQRES 1 B 178 GLY SER GLY ALA LEU TRP ASP VAL PRO ALA PRO LYS GLU SEQRES 2 B 178 VAL LYS LYS GLY GLU THR THR ASP GLY VAL TYR ARG VAL SEQRES 3 B 178 MET THR ARG ARG LEU LEU GLY SER THR GLN VAL GLY VAL SEQRES 4 B 178 GLY VAL MET GLN GLU GLY VAL PHE HIS THR MET TRP HIS SEQRES 5 B 178 VAL THR LYS GLY ALA ALA LEU ARG SER GLY GLU GLY ARG SEQRES 6 B 178 LEU ASP PRO TYR TRP GLY ASP VAL LYS GLN ASP LEU VAL SEQRES 7 B 178 SER TYR CYS GLY PRO TRP LYS LEU ASP ALA ALA TRP ASP SEQRES 8 B 178 GLY LEU SER GLU VAL GLN LEU LEU ALA VAL PRO PRO GLY SEQRES 9 B 178 GLU ARG ALA LYS ASN ILE GLN THR LEU PRO GLY ILE PHE SEQRES 10 B 178 LYS THR LYS ASP GLY ASP ILE GLY ALA VAL ALA LEU ASP SEQRES 11 B 178 TYR PRO ALA GLY THR SER GLY SER PRO ILE LEU ASP LYS SEQRES 12 B 178 CYS GLY ARG VAL ILE GLY LEU TYR GLY ASN GLY VAL VAL SEQRES 13 B 178 ILE LYS ASN GLY SER TYR VAL SER ALA ILE THR GLN GLY SEQRES 14 B 178 LYS ARG GLU GLU GLU THR PRO VAL GLU HET 7QG B 201 91 HET SO4 B 202 5 HETNAM 7QG 1-[(3~{S},6~{S},19~{R})-3,6-BIS(4-AZANYLBUTYL)-2,5,8, HETNAM 2 7QG 12,15,18-HEXAKIS(OXIDANYLIDENE)-1,4,7,11,14,17- HETNAM 3 7QG HEXAZACYCLOTRICOS-19-YL]GUANIDINE HETNAM SO4 SULFATE ION FORMUL 3 7QG C26 H49 N11 O6 FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *8(H2 O) HELIX 1 AA1 TRP B 50 LYS B 54 1 5 HELIX 2 AA2 PRO B 131 SER B 135 5 5 SHEET 1 AA1 8 GLY B 63 LEU B 65 0 SHEET 2 AA1 8 LEU B 58 SER B 60 -1 N LEU B 58 O LEU B 65 SHEET 3 AA1 8 MET A 51 GLY A 57 1 N MET A 51 O ARG B 59 SHEET 4 AA1 8 GLY B 21 THR B 27 -1 O MET B 26 N TYR A 52 SHEET 5 AA1 8 THR B 34 GLN B 42 -1 O MET B 41 N GLY B 21 SHEET 6 AA1 8 VAL B 45 MET B 49 -1 O HIS B 47 N VAL B 40 SHEET 7 AA1 8 LEU B 76 TYR B 79 -1 O VAL B 77 N THR B 48 SHEET 8 AA1 8 PRO B 67 ASP B 71 -1 N TRP B 69 O SER B 78 SHEET 1 AA2 5 GLU A 66 VAL A 67 0 SHEET 2 AA2 5 LYS B 107 THR B 111 1 O GLN B 110 N GLU A 66 SHEET 3 AA2 5 VAL B 95 ALA B 99 -1 N VAL B 95 O THR B 111 SHEET 4 AA2 5 PRO B 138 LEU B 140 -1 O LEU B 140 N GLN B 96 SHEET 5 AA2 5 VAL B 146 LEU B 149 -1 O ILE B 147 N ILE B 139 SHEET 1 AA3 6 PHE A 84 LEU A 86 0 SHEET 2 AA3 6 ARG A 73 LEU A 78 -1 N ALA A 77 O SER A 85 SHEET 3 AA3 6 GLY B 114 THR B 118 1 O LYS B 117 N LEU A 74 SHEET 4 AA3 6 GLY B 121 VAL B 126 -1 O ALA B 125 N GLY B 114 SHEET 5 AA3 6 TYR B 161 ALA B 164 -1 O SER B 163 N VAL B 126 SHEET 6 AA3 6 GLY B 153 VAL B 155 -1 N VAL B 154 O VAL B 162 SSBOND 1 CYS B 143 CYS B 143 1555 8444 2.04 CRYST1 42.450 42.450 215.734 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023557 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023557 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004635 0.00000