HEADER TRANSFERASE 11-OCT-21 7VNO TITLE STRUCTURE OF AMINOTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 454AA LONG HYPOTHETICAL 4-AMINOBUTYRATE AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII (STRAIN ATCC 700860 / DSM SOURCE 3 12428 / JCM 9974 / NBRC 100139 / OT-3); SOURCE 4 ORGANISM_TAXID: 70601; SOURCE 5 STRAIN: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3; SOURCE 6 GENE: PH1423; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PROTEIN-PLP COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.SAKURABA,T.OHSHIDA,T.OHSHIMA REVDAT 3 29-NOV-23 7VNO 1 REMARK REVDAT 2 14-SEP-22 7VNO 1 JRNL REVDAT 1 30-MAR-22 7VNO 0 JRNL AUTH R.KAWAKAMI,T.OHSHIDA,J.HAYASHI,K.YONEDA,T.FURUMOTO, JRNL AUTH 2 T.OHSHIMA,H.SAKURABA JRNL TITL CRYSTAL STRUCTURE OF A NOVEL TYPE OF ORNITHINE JRNL TITL 2 DELTA-AMINOTRANSFERASE FROM THE HYPERTHERMOPHILIC ARCHAEON JRNL TITL 3 PYROCOCCUS HORIKOSHII. JRNL REF INT.J.BIOL.MACROMOL. V. 208 731 2022 JRNL REFN ISSN 0141-8130 JRNL PMID 35337912 JRNL DOI 10.1016/J.IJBIOMAC.2022.03.114 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 97334 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5134 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7007 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 392 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7108 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 641 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.65000 REMARK 3 B22 (A**2) : 0.65000 REMARK 3 B33 (A**2) : -2.11000 REMARK 3 B12 (A**2) : 0.33000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.109 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.105 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.482 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7353 ; 0.012 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 7020 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9945 ; 1.685 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16272 ; 1.428 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 908 ; 6.527 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 374 ;33.066 ;22.406 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1283 ;14.056 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 45 ;13.225 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 933 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8196 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1513 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7VNO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300025006. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102595 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.90 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.80 REMARK 200 R MERGE FOR SHELL (I) : 0.71300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2EO5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3000, MGCL2, CACODYLATE, PH 6.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 193.36067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 96.68033 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 145.02050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.34017 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 241.70083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 193.36067 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 96.68033 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 48.34017 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 145.02050 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 241.70083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 30950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -149.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -56.68900 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 98.18823 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 241.70083 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B1392 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 293 C4A PLP B 1001 1.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 6 96.86 -161.53 REMARK 500 LYS A 8 -122.25 -104.29 REMARK 500 THR A 29 -116.65 -120.33 REMARK 500 PHE A 37 36.04 -91.19 REMARK 500 MET A 66 43.40 -91.55 REMARK 500 ARG A 71 74.83 -152.61 REMARK 500 LEU A 85 -69.61 -106.96 REMARK 500 SER A 121 -158.36 -140.24 REMARK 500 ALA A 163 44.23 -149.86 REMARK 500 SER A 164 -62.93 -97.00 REMARK 500 HIS A 218 -56.37 -130.46 REMARK 500 ALA A 292 -161.33 -171.56 REMARK 500 LYS A 293 -104.40 59.34 REMARK 500 SER A 319 -168.41 -175.69 REMARK 500 SER A 416 32.11 -152.20 REMARK 500 ASN B 6 96.81 -162.54 REMARK 500 LYS B 8 -112.68 -98.11 REMARK 500 THR B 29 -114.91 -122.71 REMARK 500 PHE B 37 46.09 -86.90 REMARK 500 MET B 66 47.06 -89.95 REMARK 500 LEU B 85 -71.21 -105.79 REMARK 500 LEU B 87 -63.30 -107.89 REMARK 500 ALA B 163 44.70 -151.39 REMARK 500 HIS B 218 -60.71 -127.75 REMARK 500 ALA B 292 -158.34 -174.75 REMARK 500 LYS B 293 -114.24 58.29 REMARK 500 SER B 319 -174.75 -173.41 REMARK 500 SER B 416 32.20 -150.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PLP A 1001 REMARK 610 PLP B 1001 DBREF 7VNO A 1 454 UNP O50131 O50131_PYRHO 1 454 DBREF 7VNO B 1 454 UNP O50131 O50131_PYRHO 1 454 SEQRES 1 A 454 MET GLU LEU LYS PRO ASN VAL LYS GLU ILE PRO GLY PRO SEQRES 2 A 454 LYS ALA ARG LYS VAL ILE GLU GLU HIS HIS LYS TYR MET SEQRES 3 A 454 ALA THR THR THR ASN ASP PRO ASN GLU TYR PHE LEU VAL SEQRES 4 A 454 ILE GLU ARG ALA GLU GLY VAL TYR TRP ILE ASP VAL ASP SEQRES 5 A 454 GLY ASN VAL LEU LEU ASP PHE SER SER GLY ILE GLY VAL SEQRES 6 A 454 MET ASN VAL GLY LEU ARG ASN PRO LYS VAL ILE GLU ALA SEQRES 7 A 454 ILE LYS LYS GLN LEU ASP LEU VAL LEU HIS ALA ALA GLY SEQRES 8 A 454 THR ASP TYR TYR ASN PRO TYR GLN VAL GLU LEU ALA LYS SEQRES 9 A 454 LYS LEU VAL GLU ILE ALA PRO GLY ASP ILE GLU ARG LYS SEQRES 10 A 454 VAL PHE LEU SER ASN SER GLY THR GLU ALA ASN GLU ALA SEQRES 11 A 454 ALA LEU LYS ILE ALA LYS TRP SER THR ASN ARG LYS MET SEQRES 12 A 454 PHE ILE ALA PHE ILE GLY ALA PHE HIS GLY ARG THR HIS SEQRES 13 A 454 GLY THR MET SER LEU THR ALA SER LYS PRO VAL GLN ARG SEQRES 14 A 454 SER ARG MET PHE PRO THR MET PRO GLY VAL VAL HIS VAL SEQRES 15 A 454 PRO TYR PRO ASN PRO TYR ARG ASN PRO TRP GLY ILE ASP SEQRES 16 A 454 GLY TYR GLU ASN PRO ASP GLU LEU ILE ASN ARG VAL ILE SEQRES 17 A 454 ASP TYR ILE GLU GLU TYR LEU PHE GLU HIS TYR VAL PRO SEQRES 18 A 454 ALA GLU GLU VAL ALA GLY ILE PHE PHE GLU PRO ILE GLN SEQRES 19 A 454 GLY GLU GLY GLY TYR VAL VAL PRO PRO LYS ASN PHE PHE SEQRES 20 A 454 LYS GLU LEU LYS LYS LEU ALA ASP LYS HIS GLY ILE LEU SEQRES 21 A 454 LEU ILE ASP ASP GLU VAL GLN MET GLY MET GLY ARG THR SEQRES 22 A 454 GLY ARG MET TRP ALA ILE GLU HIS PHE ASP ILE VAL PRO SEQRES 23 A 454 ASP ILE VAL THR VAL ALA LYS ALA LEU GLY GLY GLY ILE SEQRES 24 A 454 PRO ILE GLY ALA THR ILE PHE ARG ALA ASP LEU ASP PHE SEQRES 25 A 454 GLY VAL SER GLY VAL HIS SER ASN THR PHE GLY GLY ASN SEQRES 26 A 454 THR VAL ALA ALA ALA ALA ALA LEU ALA VAL ILE GLU GLU SEQRES 27 A 454 LEU GLN ASN GLY LEU ILE GLU ASN ALA GLN LYS LEU GLU SEQRES 28 A 454 PRO LEU PHE ARG GLU ARG LEU GLU GLU MET LYS GLU LYS SEQRES 29 A 454 TYR GLU ILE ILE GLY ASP VAL ARG GLY LEU GLY LEU ALA SEQRES 30 A 454 TRP GLY VAL GLU PHE VAL LYS ASP ARG LYS THR LYS GLU SEQRES 31 A 454 TYR ALA THR LYS GLU ARG GLY GLU ILE VAL VAL GLU ALA SEQRES 32 A 454 LEU LYS ARG GLY LEU ALA LEU LEU GLY CYS GLY LYS SER SEQRES 33 A 454 ALA ILE ARG LEU ILE PRO PRO LEU ILE ILE SER GLU GLU SEQRES 34 A 454 GLU ALA LYS MET GLY LEU ASP ILE PHE GLU GLU ALA ILE SEQRES 35 A 454 LYS VAL VAL SER GLU ARG HIS GLY TYR LYS ILE HIS SEQRES 1 B 454 MET GLU LEU LYS PRO ASN VAL LYS GLU ILE PRO GLY PRO SEQRES 2 B 454 LYS ALA ARG LYS VAL ILE GLU GLU HIS HIS LYS TYR MET SEQRES 3 B 454 ALA THR THR THR ASN ASP PRO ASN GLU TYR PHE LEU VAL SEQRES 4 B 454 ILE GLU ARG ALA GLU GLY VAL TYR TRP ILE ASP VAL ASP SEQRES 5 B 454 GLY ASN VAL LEU LEU ASP PHE SER SER GLY ILE GLY VAL SEQRES 6 B 454 MET ASN VAL GLY LEU ARG ASN PRO LYS VAL ILE GLU ALA SEQRES 7 B 454 ILE LYS LYS GLN LEU ASP LEU VAL LEU HIS ALA ALA GLY SEQRES 8 B 454 THR ASP TYR TYR ASN PRO TYR GLN VAL GLU LEU ALA LYS SEQRES 9 B 454 LYS LEU VAL GLU ILE ALA PRO GLY ASP ILE GLU ARG LYS SEQRES 10 B 454 VAL PHE LEU SER ASN SER GLY THR GLU ALA ASN GLU ALA SEQRES 11 B 454 ALA LEU LYS ILE ALA LYS TRP SER THR ASN ARG LYS MET SEQRES 12 B 454 PHE ILE ALA PHE ILE GLY ALA PHE HIS GLY ARG THR HIS SEQRES 13 B 454 GLY THR MET SER LEU THR ALA SER LYS PRO VAL GLN ARG SEQRES 14 B 454 SER ARG MET PHE PRO THR MET PRO GLY VAL VAL HIS VAL SEQRES 15 B 454 PRO TYR PRO ASN PRO TYR ARG ASN PRO TRP GLY ILE ASP SEQRES 16 B 454 GLY TYR GLU ASN PRO ASP GLU LEU ILE ASN ARG VAL ILE SEQRES 17 B 454 ASP TYR ILE GLU GLU TYR LEU PHE GLU HIS TYR VAL PRO SEQRES 18 B 454 ALA GLU GLU VAL ALA GLY ILE PHE PHE GLU PRO ILE GLN SEQRES 19 B 454 GLY GLU GLY GLY TYR VAL VAL PRO PRO LYS ASN PHE PHE SEQRES 20 B 454 LYS GLU LEU LYS LYS LEU ALA ASP LYS HIS GLY ILE LEU SEQRES 21 B 454 LEU ILE ASP ASP GLU VAL GLN MET GLY MET GLY ARG THR SEQRES 22 B 454 GLY ARG MET TRP ALA ILE GLU HIS PHE ASP ILE VAL PRO SEQRES 23 B 454 ASP ILE VAL THR VAL ALA LYS ALA LEU GLY GLY GLY ILE SEQRES 24 B 454 PRO ILE GLY ALA THR ILE PHE ARG ALA ASP LEU ASP PHE SEQRES 25 B 454 GLY VAL SER GLY VAL HIS SER ASN THR PHE GLY GLY ASN SEQRES 26 B 454 THR VAL ALA ALA ALA ALA ALA LEU ALA VAL ILE GLU GLU SEQRES 27 B 454 LEU GLN ASN GLY LEU ILE GLU ASN ALA GLN LYS LEU GLU SEQRES 28 B 454 PRO LEU PHE ARG GLU ARG LEU GLU GLU MET LYS GLU LYS SEQRES 29 B 454 TYR GLU ILE ILE GLY ASP VAL ARG GLY LEU GLY LEU ALA SEQRES 30 B 454 TRP GLY VAL GLU PHE VAL LYS ASP ARG LYS THR LYS GLU SEQRES 31 B 454 TYR ALA THR LYS GLU ARG GLY GLU ILE VAL VAL GLU ALA SEQRES 32 B 454 LEU LYS ARG GLY LEU ALA LEU LEU GLY CYS GLY LYS SER SEQRES 33 B 454 ALA ILE ARG LEU ILE PRO PRO LEU ILE ILE SER GLU GLU SEQRES 34 B 454 GLU ALA LYS MET GLY LEU ASP ILE PHE GLU GLU ALA ILE SEQRES 35 B 454 LYS VAL VAL SER GLU ARG HIS GLY TYR LYS ILE HIS HET PLP A1001 15 HET GOL A1002 6 HET EDO A1003 4 HET EDO A1004 4 HET PLP B1001 15 HET GOL B1002 6 HET EDO B1003 4 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN PLP VITAMIN B6 PHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 PLP 2(C8 H10 N O6 P) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 5 EDO 3(C2 H6 O2) FORMUL 10 HOH *641(H2 O) HELIX 1 AA1 GLY A 12 MET A 26 1 15 HELIX 2 AA2 SER A 60 VAL A 65 1 6 HELIX 3 AA3 ASN A 72 ASP A 84 1 13 HELIX 4 AA4 ASN A 96 ALA A 110 1 15 HELIX 5 AA5 SER A 123 ASN A 140 1 18 HELIX 6 AA6 THR A 155 THR A 162 1 8 HELIX 7 AA7 LYS A 165 SER A 170 5 6 HELIX 8 AA8 ASN A 199 LEU A 215 1 17 HELIX 9 AA9 PRO A 221 GLU A 223 5 3 HELIX 10 AB1 ASN A 245 HIS A 257 1 13 HELIX 11 AB2 TRP A 277 ASP A 283 5 7 HELIX 12 AB3 ALA A 294 GLY A 297 5 4 HELIX 13 AB4 ASP A 309 ASP A 311 5 3 HELIX 14 AB5 ASN A 325 ASN A 341 1 17 HELIX 15 AB6 GLY A 342 TYR A 365 1 24 HELIX 16 AB7 ALA A 392 ARG A 406 1 15 HELIX 17 AB8 SER A 427 GLY A 450 1 24 HELIX 18 AB9 GLY B 12 MET B 26 1 15 HELIX 19 AC1 SER B 60 VAL B 65 1 6 HELIX 20 AC2 ASN B 72 ASP B 84 1 13 HELIX 21 AC3 ASN B 96 ALA B 110 1 15 HELIX 22 AC4 SER B 123 ASN B 140 1 18 HELIX 23 AC5 GLY B 157 THR B 162 1 6 HELIX 24 AC6 LYS B 165 SER B 170 5 6 HELIX 25 AC7 ASN B 199 LEU B 215 1 17 HELIX 26 AC8 PRO B 221 GLU B 223 5 3 HELIX 27 AC9 ASN B 245 HIS B 257 1 13 HELIX 28 AD1 TRP B 277 ASP B 283 5 7 HELIX 29 AD2 ALA B 294 GLY B 297 5 4 HELIX 30 AD3 ASP B 309 ASP B 311 5 3 HELIX 31 AD4 ASN B 325 ASN B 341 1 17 HELIX 32 AD5 GLY B 342 TYR B 365 1 24 HELIX 33 AD6 ALA B 392 ARG B 406 1 15 HELIX 34 AD7 SER B 427 GLY B 450 1 24 SHEET 1 AA1 4 ILE A 40 GLU A 44 0 SHEET 2 AA1 4 TYR A 47 ASP A 50 -1 O ILE A 49 N ARG A 42 SHEET 3 AA1 4 VAL A 55 ASP A 58 -1 O LEU A 56 N TRP A 48 SHEET 4 AA1 4 LEU A 408 ALA A 409 1 O ALA A 409 N LEU A 57 SHEET 1 AA2 7 ARG A 116 SER A 121 0 SHEET 2 AA2 7 GLY A 302 ARG A 307 -1 O PHE A 306 N LYS A 117 SHEET 3 AA2 7 ILE A 288 ALA A 292 -1 N VAL A 289 O ILE A 305 SHEET 4 AA2 7 LEU A 260 ASP A 264 1 N ASP A 263 O ILE A 288 SHEET 5 AA2 7 VAL A 225 PHE A 230 1 N PHE A 230 O ASP A 264 SHEET 6 AA2 7 MET A 143 PHE A 147 1 N MET A 143 O ALA A 226 SHEET 7 AA2 7 VAL A 179 VAL A 182 1 O VAL A 180 N PHE A 144 SHEET 1 AA3 4 ILE A 368 LEU A 374 0 SHEET 2 AA3 4 ALA A 377 PHE A 382 -1 O GLY A 379 N ARG A 372 SHEET 3 AA3 4 ALA A 417 LEU A 420 -1 O LEU A 420 N TRP A 378 SHEET 4 AA3 4 LEU A 411 CYS A 413 -1 N LEU A 411 O ARG A 419 SHEET 1 AA4 4 ILE B 40 GLU B 44 0 SHEET 2 AA4 4 TYR B 47 ASP B 50 -1 O ILE B 49 N ARG B 42 SHEET 3 AA4 4 VAL B 55 ASP B 58 -1 O LEU B 56 N TRP B 48 SHEET 4 AA4 4 LEU B 408 ALA B 409 1 O ALA B 409 N LEU B 57 SHEET 1 AA5 7 ARG B 116 SER B 121 0 SHEET 2 AA5 7 GLY B 302 ARG B 307 -1 O PHE B 306 N LYS B 117 SHEET 3 AA5 7 ILE B 288 ALA B 292 -1 N VAL B 289 O ILE B 305 SHEET 4 AA5 7 LEU B 260 ASP B 264 1 N ASP B 263 O ILE B 288 SHEET 5 AA5 7 VAL B 225 PHE B 230 1 N PHE B 230 O ASP B 264 SHEET 6 AA5 7 MET B 143 PHE B 147 1 N MET B 143 O ALA B 226 SHEET 7 AA5 7 VAL B 179 VAL B 182 1 O VAL B 180 N PHE B 144 SHEET 1 AA6 4 ILE B 368 LEU B 374 0 SHEET 2 AA6 4 ALA B 377 PHE B 382 -1 O GLU B 381 N GLY B 369 SHEET 3 AA6 4 ALA B 417 LEU B 420 -1 O LEU B 420 N TRP B 378 SHEET 4 AA6 4 LEU B 411 CYS B 413 -1 N LEU B 411 O ARG B 419 CISPEP 1 ILE A 10 PRO A 11 0 -2.76 CISPEP 2 PHE A 173 PRO A 174 0 -1.95 CISPEP 3 ILE B 10 PRO B 11 0 -6.30 CISPEP 4 PHE B 173 PRO B 174 0 -5.01 CRYST1 113.378 113.378 290.041 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008820 0.005092 0.000000 0.00000 SCALE2 0.000000 0.010185 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003448 0.00000