data_7VNV # _entry.id 7VNV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7VNV pdb_00007vnv 10.2210/pdb7vnv/pdb WWPDB D_1300024972 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7VNV _pdbx_database_status.recvd_initial_deposition_date 2021-10-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yamashita, S.' 1 ? 'Ohira, T.' 2 ? 'Suzuki, T.' 3 ? 'Tomtia, K.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 605 _citation.language ? _citation.page_first 372 _citation.page_last 379 _citation.title 'Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41586-022-04677-2 _citation.pdbx_database_id_PubMed 35477761 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ohira, T.' 1 0000-0002-1487-1312 primary 'Minowa, K.' 2 ? primary 'Sugiyama, K.' 3 ? primary 'Yamashita, S.' 4 0000-0002-6970-8758 primary 'Sakaguchi, Y.' 5 ? primary 'Miyauchi, K.' 6 0000-0002-4075-7660 primary 'Noguchi, R.' 7 ? primary 'Kaneko, A.' 8 ? primary 'Orita, I.' 9 ? primary 'Fukui, T.' 10 ? primary 'Tomita, K.' 11 0000-0002-7374-3898 primary 'Suzuki, T.' 12 0000-0002-9731-1731 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 100.97 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7VNV _cell.details ? _cell.formula_units_Z ? _cell.length_a 32.650 _cell.length_a_esd ? _cell.length_b 116.620 _cell.length_b_esd ? _cell.length_c 57.238 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VNV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'RNA (78-MER)' 25451.400 2 ? ? ? ? 2 water nat water 18.015 92 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GGGCC(4AC)G(4SU)C(2MG)UC(PSU)A(7SN)C(OMC)UGGUUAGGAC(M2G)CCGCC(OMC)U(OMU)ACAAGGCG GAGG(9QV)(5MC)(5MC)UGGG(SUR)(PSU)(OMC)(7S3)(1MA)GUCCCAGCGGGCCCACCA ; _entity_poly.pdbx_seq_one_letter_code_can GGGCCNGUCGUCUAXCCUGGUUAGGACGCCGCCCUUACAAGGCGGAGGXCCUGGGUUCGAGUCCCAGCGGGCCCACCA _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 C n 1 5 C n 1 6 4AC n 1 7 G n 1 8 4SU n 1 9 C n 1 10 2MG n 1 11 U n 1 12 C n 1 13 PSU n 1 14 A n 1 15 7SN n 1 16 C n 1 17 OMC n 1 18 U n 1 19 G n 1 20 G n 1 21 U n 1 22 U n 1 23 A n 1 24 G n 1 25 G n 1 26 A n 1 27 C n 1 28 M2G n 1 29 C n 1 30 C n 1 31 G n 1 32 C n 1 33 C n 1 34 OMC n 1 35 U n 1 36 OMU n 1 37 A n 1 38 C n 1 39 A n 1 40 A n 1 41 G n 1 42 G n 1 43 C n 1 44 G n 1 45 G n 1 46 A n 1 47 G n 1 48 G n 1 49 9QV n 1 50 5MC n 1 51 5MC n 1 52 U n 1 53 G n 1 54 G n 1 55 G n 1 56 SUR n 1 57 PSU n 1 58 OMC n 1 59 7S3 n 1 60 1MA n 1 61 G n 1 62 U n 1 63 C n 1 64 C n 1 65 C n 1 66 A n 1 67 G n 1 68 C n 1 69 G n 1 70 G n 1 71 G n 1 72 C n 1 73 C n 1 74 C n 1 75 A n 1 76 C n 1 77 C n 1 78 A n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 78 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Sulfurisphaera tokodaii' _entity_src_nat.pdbx_ncbi_taxonomy_id 111955 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7VNV _struct_ref.pdbx_db_accession 7VNV _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7VNV A 1 ? 78 ? 7VNV 1 ? 76 ? 1 76 2 1 7VNV B 1 ? 78 ? 7VNV 1 ? 76 ? 1 76 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1MA 'RNA linking' n "6-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O7 P' 361.248 2MG 'RNA linking' n "2N-METHYLGUANOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O8 P' 377.247 4AC 'RNA linking' . "N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE" ? 'C11 H16 N3 O9 P' 365.233 4SU 'RNA linking' n "4-THIOURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O8 P S' 340.247 5MC 'RNA linking' n "5-METHYLCYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O8 P' 337.223 7S3 'RNA linking' n '[(2R,3S,4R,5R)-5-(1-methyl-6-oxidanylidene-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate' '1-methyl inosinic acid' 'C11 H15 N4 O8 P' 362.233 7SN 'RNA linking' n ;[(2R,3S,4R,5R)-5-(2-azanyl-5-carbamimidoyl-4-oxidanylidene-3H-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate ; "archaeosine-5'-monophosphate" 'C12 H17 N6 O8 P' 404.273 9QV 'RNA linking' n ;uridine 2',5'-bis(dihydrogen phosphate) ; ? 'C9 H14 N2 O12 P2' 404.161 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 M2G 'RNA linking' n "N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE" ? 'C12 H18 N5 O8 P' 391.274 OMC 'RNA linking' n "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O8 P' 337.223 OMU 'RNA linking' n ;O2'-METHYLURIDINE 5'-MONOPHOSPHATE ; ? 'C10 H15 N2 O9 P' 338.208 PSU 'RNA linking' n "PSEUDOURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 SUR 'RNA linking' n "1-(BETA-D-RIBOFURANOSYL)-2-THIO-URACIL-5'-PHOSPHATE" ? 'C9 H13 N2 O8 P S' 340.247 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7VNV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '80mM NaCl, 12mM Speremin-4HCl, 30% MPD, 40mM NaCacodylate pH 6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-25 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate 47.227 _reflns.entry_id 7VNV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 32.050 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 32418 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.719 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.650 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.843 _reflns.pdbx_scaling_rejects 4 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.073 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 217828 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.900 1.950 ? 1.530 ? 15719 2400 ? 2324 96.800 ? ? ? ? 1.599 ? ? ? ? ? ? ? ? 6.764 ? ? ? ? 1.731 ? ? 1 1 0.602 ? ? ? ? ? ? ? ? ? ? 1.950 2.010 ? 1.970 ? 15362 2354 ? 2321 98.600 ? ? ? ? 1.248 ? ? ? ? ? ? ? ? 6.619 ? ? ? ? 1.355 ? ? 2 1 0.671 ? ? ? ? ? ? ? ? ? ? 2.010 2.070 ? 2.680 ? 14866 2305 ? 2255 97.800 ? ? ? ? 0.914 ? ? ? ? ? ? ? ? 6.592 ? ? ? ? 0.992 ? ? 3 1 0.789 ? ? ? ? ? ? ? ? ? ? 2.070 2.130 ? 3.410 ? 15303 2206 ? 2180 98.800 ? ? ? ? 0.794 ? ? ? ? ? ? ? ? 7.020 ? ? ? ? 0.857 ? ? 4 1 0.851 ? ? ? ? ? ? ? ? ? ? 2.130 2.200 ? 4.510 ? 15132 2202 ? 2163 98.200 ? ? ? ? 0.585 ? ? ? ? ? ? ? ? 6.996 ? ? ? ? 0.632 ? ? 5 1 0.927 ? ? ? ? ? ? ? ? ? ? 2.200 2.280 ? 5.910 ? 14060 2054 ? 2032 98.900 ? ? ? ? 0.449 ? ? ? ? ? ? ? ? 6.919 ? ? ? ? 0.485 ? ? 6 1 0.961 ? ? ? ? ? ? ? ? ? ? 2.280 2.360 ? 7.100 ? 13706 2043 ? 2008 98.300 ? ? ? ? 0.363 ? ? ? ? ? ? ? ? 6.826 ? ? ? ? 0.393 ? ? 7 1 0.966 ? ? ? ? ? ? ? ? ? ? 2.360 2.460 ? 8.560 ? 12511 1929 ? 1911 99.100 ? ? ? ? 0.282 ? ? ? ? ? ? ? ? 6.547 ? ? ? ? 0.307 ? ? 8 1 0.975 ? ? ? ? ? ? ? ? ? ? 2.460 2.570 ? 10.970 ? 12606 1872 ? 1855 99.100 ? ? ? ? 0.219 ? ? ? ? ? ? ? ? 6.796 ? ? ? ? 0.237 ? ? 9 1 0.986 ? ? ? ? ? ? ? ? ? ? 2.570 2.690 ? 14.010 ? 12758 1784 ? 1771 99.300 ? ? ? ? 0.169 ? ? ? ? ? ? ? ? 7.204 ? ? ? ? 0.182 ? ? 10 1 0.991 ? ? ? ? ? ? ? ? ? ? 2.690 2.840 ? 18.140 ? 11881 1694 ? 1675 98.900 ? ? ? ? 0.116 ? ? ? ? ? ? ? ? 7.093 ? ? ? ? 0.125 ? ? 11 1 0.995 ? ? ? ? ? ? ? ? ? ? 2.840 3.010 ? 24.340 ? 11136 1644 ? 1632 99.300 ? ? ? ? 0.076 ? ? ? ? ? ? ? ? 6.824 ? ? ? ? 0.082 ? ? 12 1 0.997 ? ? ? ? ? ? ? ? ? ? 3.010 3.220 ? 31.670 ? 9127 1460 ? 1457 99.800 ? ? ? ? 0.049 ? ? ? ? ? ? ? ? 6.264 ? ? ? ? 0.054 ? ? 13 1 0.998 ? ? ? ? ? ? ? ? ? ? 3.220 3.480 ? 36.550 ? 8927 1415 ? 1400 98.900 ? ? ? ? 0.044 ? ? ? ? ? ? ? ? 6.376 ? ? ? ? 0.048 ? ? 14 1 0.998 ? ? ? ? ? ? ? ? ? ? 3.480 3.810 ? 38.460 ? 8712 1318 ? 1311 99.500 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 6.645 ? ? ? ? 0.045 ? ? 15 1 0.998 ? ? ? ? ? ? ? ? ? ? 3.810 4.260 ? 40.370 ? 7690 1164 ? 1156 99.300 ? ? ? ? 0.038 ? ? ? ? ? ? ? ? 6.652 ? ? ? ? 0.042 ? ? 16 1 0.998 ? ? ? ? ? ? ? ? ? ? 4.260 4.920 ? 40.200 ? 6312 1038 ? 1030 99.200 ? ? ? ? 0.039 ? ? ? ? ? ? ? ? 6.128 ? ? ? ? 0.042 ? ? 17 1 0.999 ? ? ? ? ? ? ? ? ? ? 4.920 6.020 ? 42.310 ? 5675 883 ? 883 100.000 ? ? ? ? 0.037 ? ? ? ? ? ? ? ? 6.427 ? ? ? ? 0.041 ? ? 18 1 0.999 ? ? ? ? ? ? ? ? ? ? 6.020 8.520 ? 42.170 ? 4083 688 ? 680 98.800 ? ? ? ? 0.037 ? ? ? ? ? ? ? ? 6.004 ? ? ? ? 0.040 ? ? 19 1 0.998 ? ? ? ? ? ? ? ? ? ? 8.520 32.050 ? 43.630 ? 2262 379 ? 374 98.700 ? ? ? ? 0.032 ? ? ? ? ? ? ? ? 6.048 ? ? ? ? 0.035 ? ? 20 1 0.998 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7VNV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.90 _refine.ls_d_res_low 32.05 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 32415 _refine.ls_number_reflns_R_free 1621 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.80 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1959 _refine.ls_R_factor_R_free 0.2199 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1947 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1IVS _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.14 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.24 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 32.05 _refine_hist.number_atoms_solvent 92 _refine_hist.number_atoms_total 3460 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3368 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 3754 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.013 ? 5842 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.746 ? 1872 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.047 ? 766 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 162 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.90 1.96 . . 130 2470 97.00 . . . 0.3327 . 0.3155 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.96 2.02 . . 134 2554 98.00 . . . 0.3039 . 0.2872 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.02 2.10 . . 134 2547 98.00 . . . 0.3109 . 0.2686 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.10 2.18 . . 136 2574 98.00 . . . 0.3040 . 0.2662 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.18 2.28 . . 134 2546 99.00 . . . 0.3256 . 0.2558 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.28 2.40 . . 134 2550 99.00 . . . 0.2925 . 0.2638 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.40 2.55 . . 135 2574 99.00 . . . 0.3045 . 0.2642 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.55 2.75 . . 137 2594 99.00 . . . 0.3216 . 0.2727 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.75 3.02 . . 135 2575 99.00 . . . 0.2667 . 0.2445 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.02 3.46 . . 136 2566 99.00 . . . 0.2014 . 0.1772 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.46 4.36 . . 137 2617 99.00 . . . 0.1709 . 0.1517 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.36 32.05 . . 139 2627 99.00 . . . 0.1578 . 0.1387 . . . . . . . . . . . # _struct.entry_id 7VNV _struct.title 'Crystal Structure of tRNAVal from Sulfolobus Tokodaii' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7VNV _struct_keywords.text 'tRNAVal, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A C 5 "O3'" ? ? ? 1_555 A 4AC 6 P ? ? A C 5 A 4AC 6 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale2 covale both ? A 4AC 6 "O3'" ? ? ? 1_555 A G 7 P ? ? A 4AC 6 A G 7 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale3 covale both ? A G 7 "O3'" ? ? ? 1_555 A 4SU 8 P ? ? A G 7 A 4SU 8 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale4 covale both ? A 4SU 8 "O3'" ? ? ? 1_555 A C 9 P ? ? A 4SU 8 A C 9 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale5 covale both ? A C 9 "O3'" ? ? ? 1_555 A 2MG 10 P ? ? A C 9 A 2MG 10 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale6 covale both ? A 2MG 10 "O3'" ? ? ? 1_555 A U 11 P ? ? A 2MG 10 A U 11 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale7 covale both ? A C 12 "O3'" ? ? ? 1_555 A PSU 13 P ? ? A C 12 A PSU 13 1_555 ? ? ? ? ? ? ? 1.622 ? ? covale8 covale both ? A PSU 13 "O3'" ? ? ? 1_555 A A 14 P ? ? A PSU 13 A A 14 1_555 ? ? ? ? ? ? ? 1.625 ? ? covale9 covale both ? A A 14 "O3'" ? ? ? 1_555 A 7SN 15 P ? ? A A 14 A 7SN 15 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale10 covale one ? A 7SN 15 "O3'" ? ? ? 1_555 A C 16 P ? ? A 7SN 15 A C 16 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale11 covale both ? A C 16 "O3'" ? ? ? 1_555 A OMC 17 P ? ? A C 16 A OMC 17 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale12 covale both ? A OMC 17 "O3'" ? ? ? 1_555 A U 18 P ? A A OMC 17 A U 17 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale13 covale both ? A C 27 "O3'" ? ? ? 1_555 A M2G 28 P ? ? A C 25 A M2G 26 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale14 covale both ? A M2G 28 "O3'" ? ? ? 1_555 A C 29 P ? ? A M2G 26 A C 27 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale15 covale both ? A C 33 "O3'" ? ? ? 1_555 A OMC 34 P ? ? A C 31 A OMC 32 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale16 covale both ? A OMC 34 "O3'" ? ? ? 1_555 A U 35 P ? ? A OMC 32 A U 33 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale17 covale both ? A U 35 "O3'" ? ? ? 1_555 A OMU 36 P ? ? A U 33 A OMU 34 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale18 covale both ? A OMU 36 "O3'" ? ? ? 1_555 A A 37 P ? ? A OMU 34 A A 35 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale19 covale both ? A G 48 "O3'" ? ? ? 1_555 A 9QV 49 P ? ? A G 46 A 9QV 47 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale20 covale one ? A 9QV 49 "O3'" ? ? ? 1_555 A 5MC 50 P ? ? A 9QV 47 A 5MC 48 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale21 covale both ? A 5MC 50 "O3'" ? ? ? 1_555 A 5MC 51 P ? ? A 5MC 48 A 5MC 49 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale22 covale both ? A 5MC 51 "O3'" ? ? ? 1_555 A U 52 P ? ? A 5MC 49 A U 50 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale23 covale both ? A G 55 "O3'" ? ? ? 1_555 A SUR 56 P ? ? A G 53 A SUR 54 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale24 covale both ? A SUR 56 "O3'" ? ? ? 1_555 A PSU 57 P ? ? A SUR 54 A PSU 55 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale25 covale both ? A PSU 57 "O3'" ? ? ? 1_555 A OMC 58 P ? ? A PSU 55 A OMC 56 1_555 ? ? ? ? ? ? ? 1.619 ? ? covale26 covale both ? A OMC 58 "O3'" ? ? ? 1_555 A 7S3 59 P ? ? A OMC 56 A 7S3 57 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale27 covale one ? A 7S3 59 "O3'" ? ? ? 1_555 A 1MA 60 P ? ? A 7S3 57 A 1MA 58 1_555 ? ? ? ? ? ? ? 1.596 ? ? covale28 covale both ? A 1MA 60 "O3'" ? ? ? 1_555 A G 61 P ? ? A 1MA 58 A G 59 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale29 covale both ? B C 5 "O3'" ? ? ? 1_555 B 4AC 6 P ? ? B C 5 B 4AC 6 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale30 covale both ? B 4AC 6 "O3'" ? ? ? 1_555 B G 7 P ? ? B 4AC 6 B G 7 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale31 covale both ? B G 7 "O3'" ? ? ? 1_555 B 4SU 8 P ? ? B G 7 B 4SU 8 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale32 covale both ? B 4SU 8 "O3'" ? ? ? 1_555 B C 9 P ? ? B 4SU 8 B C 9 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale33 covale both ? B C 9 "O3'" ? ? ? 1_555 B 2MG 10 P ? ? B C 9 B 2MG 10 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale34 covale both ? B 2MG 10 "O3'" ? ? ? 1_555 B U 11 P ? ? B 2MG 10 B U 11 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale35 covale both ? B C 12 "O3'" ? ? ? 1_555 B PSU 13 P ? ? B C 12 B PSU 13 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale36 covale both ? B PSU 13 "O3'" ? ? ? 1_555 B A 14 P ? ? B PSU 13 B A 14 1_555 ? ? ? ? ? ? ? 1.634 ? ? covale37 covale both ? B A 14 "O3'" ? ? ? 1_555 B 7SN 15 P ? ? B A 14 B 7SN 15 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale38 covale one ? B 7SN 15 "O3'" ? ? ? 1_555 B C 16 P ? ? B 7SN 15 B C 16 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale39 covale both ? B C 16 "O3'" ? ? ? 1_555 B OMC 17 P ? ? B C 16 B OMC 17 1_555 ? ? ? ? ? ? ? 1.618 ? ? covale40 covale both ? B OMC 17 "O3'" ? ? ? 1_555 B U 18 P ? A B OMC 17 B U 17 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale41 covale both ? B C 27 "O3'" ? ? ? 1_555 B M2G 28 P ? ? B C 25 B M2G 26 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale42 covale both ? B M2G 28 "O3'" ? ? ? 1_555 B C 29 P ? ? B M2G 26 B C 27 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale43 covale both ? B C 33 "O3'" ? ? ? 1_555 B OMC 34 P ? ? B C 31 B OMC 32 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale44 covale both ? B OMC 34 "O3'" ? ? ? 1_555 B U 35 P ? ? B OMC 32 B U 33 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale45 covale both ? B U 35 "O3'" ? ? ? 1_555 B OMU 36 P ? ? B U 33 B OMU 34 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale46 covale both ? B OMU 36 "O3'" ? ? ? 1_555 B A 37 P ? ? B OMU 34 B A 35 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale47 covale both ? B G 48 "O3'" ? ? ? 1_555 B 9QV 49 P ? ? B G 46 B 9QV 47 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale48 covale one ? B 9QV 49 "O3'" ? ? ? 1_555 B 5MC 50 P ? ? B 9QV 47 B 5MC 48 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale49 covale both ? B 5MC 50 "O3'" ? ? ? 1_555 B 5MC 51 P ? ? B 5MC 48 B 5MC 49 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale50 covale both ? B 5MC 51 "O3'" ? ? ? 1_555 B U 52 P ? ? B 5MC 49 B U 50 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale51 covale both ? B G 55 "O3'" ? ? ? 1_555 B SUR 56 P ? ? B G 53 B SUR 54 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale52 covale both ? B SUR 56 "O3'" ? ? ? 1_555 B PSU 57 P ? ? B SUR 54 B PSU 55 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale53 covale both ? B PSU 57 "O3'" ? ? ? 1_555 B OMC 58 P ? ? B PSU 55 B OMC 56 1_555 ? ? ? ? ? ? ? 1.621 ? ? covale54 covale both ? B OMC 58 "O3'" ? ? ? 1_555 B 7S3 59 P ? ? B OMC 56 B 7S3 57 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale55 covale one ? B 7S3 59 "O3'" ? ? ? 1_555 B 1MA 60 P ? ? B 7S3 57 B 1MA 58 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale56 covale both ? B 1MA 60 "O3'" ? ? ? 1_555 B G 61 P ? ? B 1MA 58 B G 59 1_555 ? ? ? ? ? ? ? 1.608 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 74 N3 ? ? A G 1 A C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 74 O2 ? ? A G 1 A C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 74 N4 ? ? A G 1 A C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 73 N3 ? ? A G 2 A C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 73 O2 ? ? A G 2 A C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 73 N4 ? ? A G 2 A C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 72 N3 ? ? A G 3 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 72 O2 ? ? A G 3 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 72 N4 ? ? A G 3 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 71 N1 ? ? A C 4 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 71 O6 ? ? A C 4 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 71 N2 ? ? A C 4 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 70 N1 ? ? A C 5 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 70 O6 ? ? A C 5 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 70 N2 ? ? A C 5 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 68 N3 ? ? A G 7 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 68 O2 ? ? A G 7 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 68 N4 ? ? A G 7 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A 4SU 8 N3 ? ? ? 1_555 A A 14 N7 ? ? A 4SU 8 A A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog20 hydrog ? ? A 4SU 8 O2 ? ? ? 1_555 A A 14 N6 ? ? A 4SU 8 A A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog21 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 25 N7 ? ? A C 9 A G 23 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog22 hydrog ? ? A 2MG 10 N1 ? ? ? 1_555 A C 27 N3 ? ? A 2MG 10 A C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A 2MG 10 N2 ? ? ? 1_555 A C 27 O2 ? ? A 2MG 10 A C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A 2MG 10 O6 ? ? ? 1_555 A C 27 N4 ? ? A 2MG 10 A C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A 2MG 10 O6 ? ? ? 1_555 A G 47 N2 ? ? A 2MG 10 A G 45 1_555 ? ? ? ? ? ? '2MG-G MISPAIR' ? ? ? hydrog26 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 26 N1 ? ? A U 11 A A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 26 N6 ? ? A U 11 A A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 25 N1 ? ? A C 12 A G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 25 O6 ? ? A C 12 A G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 25 N2 ? ? A C 12 A G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A PSU 13 N3 ? ? ? 1_555 A G 24 O6 ? ? A PSU 13 A G 22 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog32 hydrog ? ? A PSU 13 O4 ? ? ? 1_555 A G 24 N1 ? ? A PSU 13 A G 22 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog33 hydrog ? ? A PSU 13 O2 ? ? ? 1_555 A G 48 N2 ? ? A PSU 13 A G 46 1_555 ? ? ? ? ? ? 'PSU-G MISPAIR' ? ? ? hydrog34 hydrog ? ? A A 14 N6 ? ? ? 1_555 A A 23 N3 ? ? A A 14 A A 21 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog35 hydrog ? ? A 7SN 15 N1 ? ? ? 1_555 A 5MC 50 O2 ? ? A 7SN 15 A 5MC 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog36 hydrog ? ? A 7SN 15 N2 ? ? ? 1_555 A 5MC 50 N3 ? ? A 7SN 15 A 5MC 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog37 hydrog ? ? A C 16 O2 ? ? ? 1_555 A G 61 N2 ? ? A C 16 A G 59 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog38 hydrog ? ? A G 19 N1 ? ? ? 1_555 A PSU 57 O4 ? ? A G 18 A PSU 55 1_555 ? ? ? ? ? ? 'G-PSU MISPAIR' ? ? ? hydrog39 hydrog ? ? A G 20 N1 ? ? ? 1_555 A OMC 58 N3 ? ? A G 19 A OMC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 20 N2 ? ? ? 1_555 A OMC 58 O2 ? ? A G 19 A OMC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 20 O6 ? ? ? 1_555 A OMC 58 N4 ? ? A G 19 A OMC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 24 N7 ? ? ? 1_555 A G 48 N1 ? ? A G 22 A G 46 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog43 hydrog ? ? A G 24 O6 ? ? ? 1_555 A G 48 N2 ? ? A G 22 A G 46 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog44 hydrog ? ? A M2G 28 N1 ? ? ? 1_555 A A 46 N1 ? ? A M2G 26 A A 44 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog45 hydrog ? ? A M2G 28 O6 ? ? ? 1_555 A A 46 N6 ? ? A M2G 26 A A 44 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog46 hydrog ? ? A C 29 N3 ? ? ? 1_555 A G 45 N1 ? ? A C 27 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 29 N4 ? ? ? 1_555 A G 45 O6 ? ? A C 27 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 29 O2 ? ? ? 1_555 A G 45 N2 ? ? A C 27 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 30 N3 ? ? ? 1_555 A G 44 N1 ? ? A C 28 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 30 N4 ? ? ? 1_555 A G 44 O6 ? ? A C 28 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 30 O2 ? ? ? 1_555 A G 44 N2 ? ? A C 28 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 31 N1 ? ? ? 1_555 A C 43 N3 ? ? A G 29 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 31 N2 ? ? ? 1_555 A C 43 O2 ? ? A G 29 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 31 O6 ? ? ? 1_555 A C 43 N4 ? ? A G 29 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 42 N1 ? ? A C 30 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 42 O6 ? ? A C 30 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 42 N2 ? ? A C 30 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 33 N3 ? ? ? 1_555 A G 41 N1 ? ? A C 31 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A C 33 N4 ? ? ? 1_555 A G 41 O6 ? ? A C 31 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 33 O2 ? ? ? 1_555 A G 41 N2 ? ? A C 31 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A OMC 34 O2 ? ? ? 1_555 A A 40 N6 ? ? A OMC 32 A A 38 1_555 ? ? ? ? ? ? 'OMC-A MISPAIR' ? ? ? hydrog62 hydrog ? ? A 5MC 51 N3 ? ? ? 1_555 A G 67 N1 ? ? A 5MC 49 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A 5MC 51 N4 ? ? ? 1_555 A G 67 O6 ? ? A 5MC 49 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A 5MC 51 O2 ? ? ? 1_555 A G 67 N2 ? ? A 5MC 49 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A U 52 N3 ? ? ? 1_555 A A 66 N1 ? ? A U 50 A A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A U 52 O4 ? ? ? 1_555 A A 66 N6 ? ? A U 50 A A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A G 53 N1 ? ? ? 1_555 A C 65 N3 ? ? A G 51 A C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 53 N2 ? ? ? 1_555 A C 65 O2 ? ? A G 51 A C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 53 O6 ? ? ? 1_555 A C 65 N4 ? ? A G 51 A C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 54 N1 ? ? ? 1_555 A C 64 N3 ? ? A G 52 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 54 N2 ? ? ? 1_555 A C 64 O2 ? ? A G 52 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 54 O6 ? ? ? 1_555 A C 64 N4 ? ? A G 52 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 55 N1 ? ? ? 1_555 A C 63 N3 ? ? A G 53 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 55 N2 ? ? ? 1_555 A C 63 O2 ? ? A G 53 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 55 O6 ? ? ? 1_555 A C 63 N4 ? ? A G 53 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A SUR 56 N3 ? ? ? 1_555 A 1MA 60 N7 ? ? A SUR 54 A 1MA 58 1_555 ? ? ? ? ? ? 'SUR-1MA MISPAIR' ? ? ? hydrog77 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 74 N3 ? ? B G 1 B C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 74 O2 ? ? B G 1 B C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 74 N4 ? ? B G 1 B C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 73 N3 ? ? B G 2 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 73 O2 ? ? B G 2 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 73 N4 ? ? B G 2 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B G 3 N1 ? ? ? 1_555 B C 72 N3 ? ? B G 3 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 72 O2 ? ? B G 3 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B G 3 O6 ? ? ? 1_555 B C 72 N4 ? ? B G 3 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 71 N1 ? ? B C 4 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 71 O6 ? ? B C 4 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 71 N2 ? ? B C 4 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 70 N1 ? ? B C 5 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 70 O6 ? ? B C 5 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 70 N2 ? ? B C 5 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B G 7 N1 ? ? ? 1_555 B C 68 N3 ? ? B G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B G 7 N2 ? ? ? 1_555 B C 68 O2 ? ? B G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B G 7 O6 ? ? ? 1_555 B C 68 N4 ? ? B G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B 4SU 8 N3 ? ? ? 1_555 B A 14 N7 ? ? B 4SU 8 B A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog96 hydrog ? ? B 4SU 8 O2 ? ? ? 1_555 B A 14 N6 ? ? B 4SU 8 B A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog97 hydrog ? ? B C 9 N4 ? ? ? 1_555 B G 24 N7 ? ? B C 9 B G 22 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog98 hydrog ? ? B 2MG 10 N1 ? ? ? 1_555 B C 27 N3 ? ? B 2MG 10 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B 2MG 10 N2 ? ? ? 1_555 B C 27 O2 ? ? B 2MG 10 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B 2MG 10 O6 ? ? ? 1_555 B C 27 N4 ? ? B 2MG 10 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B 2MG 10 O6 ? ? ? 1_555 B G 47 N2 ? ? B 2MG 10 B G 45 1_555 ? ? ? ? ? ? '2MG-G MISPAIR' ? ? ? hydrog102 hydrog ? ? B U 11 N3 ? ? ? 1_555 B A 26 N1 ? ? B U 11 B A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B U 11 O4 ? ? ? 1_555 B A 26 N6 ? ? B U 11 B A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 25 N1 ? ? B C 12 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 25 O6 ? ? B C 12 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 25 N2 ? ? B C 12 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B PSU 13 N3 ? ? ? 1_555 B G 24 O6 ? ? B PSU 13 B G 22 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog108 hydrog ? ? B PSU 13 O4 ? ? ? 1_555 B G 24 N1 ? ? B PSU 13 B G 22 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog109 hydrog ? ? B A 14 N6 ? ? ? 1_555 B A 23 N3 ? ? B A 14 B A 21 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog110 hydrog ? ? B 7SN 15 N1 ? ? ? 1_555 B 5MC 50 O2 ? ? B 7SN 15 B 5MC 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog111 hydrog ? ? B 7SN 15 N2 ? ? ? 1_555 B 5MC 50 N3 ? ? B 7SN 15 B 5MC 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog112 hydrog ? ? B C 16 O2 ? ? ? 1_555 B G 61 N2 ? ? B C 16 B G 59 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog113 hydrog ? ? B G 19 N1 ? ? ? 1_555 B PSU 57 O4 ? ? B G 18 B PSU 55 1_555 ? ? ? ? ? ? 'G-PSU MISPAIR' ? ? ? hydrog114 hydrog ? ? B G 20 N1 ? ? ? 1_555 B OMC 58 N3 ? ? B G 19 B OMC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B G 20 N2 ? ? ? 1_555 B OMC 58 O2 ? ? B G 19 B OMC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B G 20 O6 ? ? ? 1_555 B OMC 58 N4 ? ? B G 19 B OMC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? B A 23 N7 ? ? ? 1_555 B G 48 N2 ? ? B A 21 B G 46 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog118 hydrog ? ? B M2G 28 N1 ? ? ? 1_555 B A 46 N1 ? ? B M2G 26 B A 44 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog119 hydrog ? ? B M2G 28 O6 ? ? ? 1_555 B A 46 N6 ? ? B M2G 26 B A 44 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog120 hydrog ? ? B C 29 N3 ? ? ? 1_555 B G 45 N1 ? ? B C 27 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? B C 29 N4 ? ? ? 1_555 B G 45 O6 ? ? B C 27 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? B C 29 O2 ? ? ? 1_555 B G 45 N2 ? ? B C 27 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B C 30 N3 ? ? ? 1_555 B G 44 N1 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B C 30 N4 ? ? ? 1_555 B G 44 O6 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B C 30 O2 ? ? ? 1_555 B G 44 N2 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B G 31 N1 ? ? ? 1_555 B C 43 N3 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B G 31 N2 ? ? ? 1_555 B C 43 O2 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B G 31 O6 ? ? ? 1_555 B C 43 N4 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B C 32 N3 ? ? ? 1_555 B G 42 N1 ? ? B C 30 B G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B C 32 N4 ? ? ? 1_555 B G 42 O6 ? ? B C 30 B G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B C 32 O2 ? ? ? 1_555 B G 42 N2 ? ? B C 30 B G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B C 33 N3 ? ? ? 1_555 B G 41 N1 ? ? B C 31 B G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B C 33 N4 ? ? ? 1_555 B G 41 O6 ? ? B C 31 B G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B C 33 O2 ? ? ? 1_555 B G 41 N2 ? ? B C 31 B G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B OMC 34 O2 ? ? ? 1_555 B A 40 N6 ? ? B OMC 32 B A 38 1_555 ? ? ? ? ? ? 'OMC-A MISPAIR' ? ? ? hydrog136 hydrog ? ? B 5MC 51 N3 ? ? ? 1_555 B G 67 N1 ? ? B 5MC 49 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B 5MC 51 N4 ? ? ? 1_555 B G 67 O6 ? ? B 5MC 49 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B 5MC 51 O2 ? ? ? 1_555 B G 67 N2 ? ? B 5MC 49 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B U 52 N3 ? ? ? 1_555 B A 66 N1 ? ? B U 50 B A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? B U 52 O4 ? ? ? 1_555 B A 66 N6 ? ? B U 50 B A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? B G 53 N1 ? ? ? 1_555 B C 65 N3 ? ? B G 51 B C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? B G 53 N2 ? ? ? 1_555 B C 65 O2 ? ? B G 51 B C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? B G 53 O6 ? ? ? 1_555 B C 65 N4 ? ? B G 51 B C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? B G 54 N1 ? ? ? 1_555 B C 64 N3 ? ? B G 52 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? B G 54 N2 ? ? ? 1_555 B C 64 O2 ? ? B G 52 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? B G 54 O6 ? ? ? 1_555 B C 64 N4 ? ? B G 52 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? B G 55 N1 ? ? ? 1_555 B C 63 N3 ? ? B G 53 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? B G 55 N2 ? ? ? 1_555 B C 63 O2 ? ? B G 53 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? B G 55 O6 ? ? ? 1_555 B C 63 N4 ? ? B G 53 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? B SUR 56 N3 ? ? ? 1_555 B 1MA 60 N7 ? ? B SUR 54 B 1MA 58 1_555 ? ? ? ? ? ? 'SUR-1MA MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _atom_sites.entry_id 7VNV _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.030628 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005936 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008575 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017796 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 G 3 3 3 G G A . n A 1 4 C 4 4 4 C C A . n A 1 5 C 5 5 5 C C A . n A 1 6 4AC 6 6 6 4AC 4AC A . n A 1 7 G 7 7 7 G G A . n A 1 8 4SU 8 8 8 4SU 4SU A . n A 1 9 C 9 9 9 C C A . n A 1 10 2MG 10 10 10 2MG 2MG A . n A 1 11 U 11 11 11 U U A . n A 1 12 C 12 12 12 C C A . n A 1 13 PSU 13 13 13 PSU PSU A . n A 1 14 A 14 14 14 A A A . n A 1 15 7SN 15 15 15 7SN F7G A . n A 1 16 C 16 16 16 C C A . n A 1 17 OMC 17 17 17 OMC OMC A . n A 1 18 U 18 17 17 U U A A n A 1 19 G 19 18 18 G G A . n A 1 20 G 20 19 19 G G A . n A 1 21 U 21 20 20 U U A . n A 1 22 U 22 20 20 U U A A n A 1 23 A 23 21 21 A A A . n A 1 24 G 24 22 22 G G A . n A 1 25 G 25 23 23 G G A . n A 1 26 A 26 24 24 A A A . n A 1 27 C 27 25 25 C C A . n A 1 28 M2G 28 26 26 M2G M2G A . n A 1 29 C 29 27 27 C C A . n A 1 30 C 30 28 28 C C A . n A 1 31 G 31 29 29 G G A . n A 1 32 C 32 30 30 C C A . n A 1 33 C 33 31 31 C C A . n A 1 34 OMC 34 32 32 OMC OMC A . n A 1 35 U 35 33 33 U U A . n A 1 36 OMU 36 34 34 OMU OMU A . n A 1 37 A 37 35 35 A A A . n A 1 38 C 38 36 36 C C A . n A 1 39 A 39 37 37 A A A . n A 1 40 A 40 38 38 A A A . n A 1 41 G 41 39 39 G G A . n A 1 42 G 42 40 40 G G A . n A 1 43 C 43 41 41 C C A . n A 1 44 G 44 42 42 G G A . n A 1 45 G 45 43 43 G G A . n A 1 46 A 46 44 44 A A A . n A 1 47 G 47 45 45 G G A . n A 1 48 G 48 46 46 G G A . n A 1 49 9QV 49 47 47 9QV OPU A . n A 1 50 5MC 50 48 48 5MC 5MC A . n A 1 51 5MC 51 49 49 5MC 5MC A . n A 1 52 U 52 50 50 U U A . n A 1 53 G 53 51 51 G G A . n A 1 54 G 54 52 52 G G A . n A 1 55 G 55 53 53 G G A . n A 1 56 SUR 56 54 54 SUR 2SU A . n A 1 57 PSU 57 55 55 PSU PSU A . n A 1 58 OMC 58 56 56 OMC OMC A . n A 1 59 7S3 59 57 57 7S3 1MI A . n A 1 60 1MA 60 58 58 1MA 1MA A . n A 1 61 G 61 59 59 G G A . n A 1 62 U 62 60 60 U U A . n A 1 63 C 63 61 61 C C A . n A 1 64 C 64 62 62 C C A . n A 1 65 C 65 63 63 C C A . n A 1 66 A 66 64 64 A A A . n A 1 67 G 67 65 65 G G A . n A 1 68 C 68 66 66 C C A . n A 1 69 G 69 67 67 G G A . n A 1 70 G 70 68 68 G G A . n A 1 71 G 71 69 69 G G A . n A 1 72 C 72 70 70 C C A . n A 1 73 C 73 71 71 C C A . n A 1 74 C 74 72 72 C C A . n A 1 75 A 75 73 73 A A A . n A 1 76 C 76 74 74 C C A . n A 1 77 C 77 75 75 C C A . n A 1 78 A 78 76 76 A A A . n B 1 1 G 1 1 1 G G B . n B 1 2 G 2 2 2 G G B . n B 1 3 G 3 3 3 G G B . n B 1 4 C 4 4 4 C C B . n B 1 5 C 5 5 5 C C B . n B 1 6 4AC 6 6 6 4AC 4AC B . n B 1 7 G 7 7 7 G G B . n B 1 8 4SU 8 8 8 4SU 4SU B . n B 1 9 C 9 9 9 C C B . n B 1 10 2MG 10 10 10 2MG 2MG B . n B 1 11 U 11 11 11 U U B . n B 1 12 C 12 12 12 C C B . n B 1 13 PSU 13 13 13 PSU PSU B . n B 1 14 A 14 14 14 A A B . n B 1 15 7SN 15 15 15 7SN F7G B . n B 1 16 C 16 16 16 C C B . n B 1 17 OMC 17 17 17 OMC OMC B . n B 1 18 U 18 17 17 U U B A n B 1 19 G 19 18 18 G G B . n B 1 20 G 20 19 19 G G B . n B 1 21 U 21 20 20 U U B . n B 1 22 U 22 20 20 U U B A n B 1 23 A 23 21 21 A A B . n B 1 24 G 24 22 22 G G B . n B 1 25 G 25 23 23 G G B . n B 1 26 A 26 24 24 A A B . n B 1 27 C 27 25 25 C C B . n B 1 28 M2G 28 26 26 M2G M2G B . n B 1 29 C 29 27 27 C C B . n B 1 30 C 30 28 28 C C B . n B 1 31 G 31 29 29 G G B . n B 1 32 C 32 30 30 C C B . n B 1 33 C 33 31 31 C C B . n B 1 34 OMC 34 32 32 OMC OMC B . n B 1 35 U 35 33 33 U U B . n B 1 36 OMU 36 34 34 OMU OMU B . n B 1 37 A 37 35 35 A A B . n B 1 38 C 38 36 36 C C B . n B 1 39 A 39 37 37 A A B . n B 1 40 A 40 38 38 A A B . n B 1 41 G 41 39 39 G G B . n B 1 42 G 42 40 40 G G B . n B 1 43 C 43 41 41 C C B . n B 1 44 G 44 42 42 G G B . n B 1 45 G 45 43 43 G G B . n B 1 46 A 46 44 44 A A B . n B 1 47 G 47 45 45 G G B . n B 1 48 G 48 46 46 G G B . n B 1 49 9QV 49 47 47 9QV OPU B . n B 1 50 5MC 50 48 48 5MC 5MC B . n B 1 51 5MC 51 49 49 5MC 5MC B . n B 1 52 U 52 50 50 U U B . n B 1 53 G 53 51 51 G G B . n B 1 54 G 54 52 52 G G B . n B 1 55 G 55 53 53 G G B . n B 1 56 SUR 56 54 54 SUR 2SU B . n B 1 57 PSU 57 55 55 PSU PSU B . n B 1 58 OMC 58 56 56 OMC OMC B . n B 1 59 7S3 59 57 57 7S3 1MI B . n B 1 60 1MA 60 58 58 1MA 1MA B . n B 1 61 G 61 59 59 G G B . n B 1 62 U 62 60 60 U U B . n B 1 63 C 63 61 61 C C B . n B 1 64 C 64 62 62 C C B . n B 1 65 C 65 63 63 C C B . n B 1 66 A 66 64 64 A A B . n B 1 67 G 67 65 65 G G B . n B 1 68 C 68 66 66 C C B . n B 1 69 G 69 67 67 G G B . n B 1 70 G 70 68 68 G G B . n B 1 71 G 71 69 69 G G B . n B 1 72 C 72 70 70 C C B . n B 1 73 C 73 71 71 C C B . n B 1 74 C 74 72 72 C C B . n B 1 75 A 75 73 73 A A B . n B 1 76 C 76 74 74 C C B . n B 1 77 C 77 75 75 C C B . n B 1 78 A 78 76 76 A A B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email kozo-tomita@edu.k.u-tokyo.ac.jp _pdbx_contact_author.name_first Kozo _pdbx_contact_author.name_last Tomita _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7374-3898 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 101 31 HOH HOH A . C 2 HOH 2 102 55 HOH HOH A . C 2 HOH 3 103 1 HOH HOH A . C 2 HOH 4 104 61 HOH HOH A . C 2 HOH 5 105 62 HOH HOH A . C 2 HOH 6 106 76 HOH HOH A . C 2 HOH 7 107 89 HOH HOH A . C 2 HOH 8 108 24 HOH HOH A . C 2 HOH 9 109 16 HOH HOH A . C 2 HOH 10 110 44 HOH HOH A . C 2 HOH 11 111 5 HOH HOH A . C 2 HOH 12 112 64 HOH HOH A . C 2 HOH 13 113 65 HOH HOH A . C 2 HOH 14 114 50 HOH HOH A . C 2 HOH 15 115 21 HOH HOH A . C 2 HOH 16 116 70 HOH HOH A . C 2 HOH 17 117 6 HOH HOH A . C 2 HOH 18 118 81 HOH HOH A . C 2 HOH 19 119 12 HOH HOH A . C 2 HOH 20 120 33 HOH HOH A . C 2 HOH 21 121 2 HOH HOH A . C 2 HOH 22 122 18 HOH HOH A . C 2 HOH 23 123 74 HOH HOH A . C 2 HOH 24 124 25 HOH HOH A . C 2 HOH 25 125 66 HOH HOH A . C 2 HOH 26 126 92 HOH HOH A . C 2 HOH 27 127 48 HOH HOH A . C 2 HOH 28 128 37 HOH HOH A . C 2 HOH 29 129 63 HOH HOH A . C 2 HOH 30 130 23 HOH HOH A . C 2 HOH 31 131 11 HOH HOH A . C 2 HOH 32 132 10 HOH HOH A . C 2 HOH 33 133 45 HOH HOH A . C 2 HOH 34 134 41 HOH HOH A . C 2 HOH 35 135 49 HOH HOH A . C 2 HOH 36 136 87 HOH HOH A . C 2 HOH 37 137 84 HOH HOH A . C 2 HOH 38 138 14 HOH HOH A . C 2 HOH 39 139 86 HOH HOH A . C 2 HOH 40 140 53 HOH HOH A . C 2 HOH 41 141 90 HOH HOH A . C 2 HOH 42 142 85 HOH HOH A . C 2 HOH 43 143 30 HOH HOH A . C 2 HOH 44 144 77 HOH HOH A . C 2 HOH 45 145 40 HOH HOH A . C 2 HOH 46 146 22 HOH HOH A . C 2 HOH 47 147 91 HOH HOH A . C 2 HOH 48 148 32 HOH HOH A . C 2 HOH 49 149 79 HOH HOH A . C 2 HOH 50 150 26 HOH HOH A . C 2 HOH 51 151 75 HOH HOH A . C 2 HOH 52 152 69 HOH HOH A . C 2 HOH 53 153 80 HOH HOH A . C 2 HOH 54 154 88 HOH HOH A . D 2 HOH 1 101 78 HOH HOH B . D 2 HOH 2 102 58 HOH HOH B . D 2 HOH 3 103 8 HOH HOH B . D 2 HOH 4 104 20 HOH HOH B . D 2 HOH 5 105 19 HOH HOH B . D 2 HOH 6 106 52 HOH HOH B . D 2 HOH 7 107 60 HOH HOH B . D 2 HOH 8 108 15 HOH HOH B . D 2 HOH 9 109 68 HOH HOH B . D 2 HOH 10 110 54 HOH HOH B . D 2 HOH 11 111 59 HOH HOH B . D 2 HOH 12 112 51 HOH HOH B . D 2 HOH 13 113 42 HOH HOH B . D 2 HOH 14 114 47 HOH HOH B . D 2 HOH 15 115 7 HOH HOH B . D 2 HOH 16 116 4 HOH HOH B . D 2 HOH 17 117 13 HOH HOH B . D 2 HOH 18 118 46 HOH HOH B . D 2 HOH 19 119 43 HOH HOH B . D 2 HOH 20 120 73 HOH HOH B . D 2 HOH 21 121 34 HOH HOH B . D 2 HOH 22 122 35 HOH HOH B . D 2 HOH 23 123 67 HOH HOH B . D 2 HOH 24 124 83 HOH HOH B . D 2 HOH 25 125 71 HOH HOH B . D 2 HOH 26 126 27 HOH HOH B . D 2 HOH 27 127 3 HOH HOH B . D 2 HOH 28 128 9 HOH HOH B . D 2 HOH 29 129 29 HOH HOH B . D 2 HOH 30 130 38 HOH HOH B . D 2 HOH 31 131 82 HOH HOH B . D 2 HOH 32 132 39 HOH HOH B . D 2 HOH 33 133 28 HOH HOH B . D 2 HOH 34 134 56 HOH HOH B . D 2 HOH 35 135 57 HOH HOH B . D 2 HOH 36 136 17 HOH HOH B . D 2 HOH 37 137 36 HOH HOH B . D 2 HOH 38 138 72 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-05-04 2 'Structure model' 1 1 2022-05-11 3 'Structure model' 1 2 2022-05-25 4 'Structure model' 2 0 2022-06-15 5 'Structure model' 3 0 2023-07-26 6 'Structure model' 3 1 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Polymer sequence' 4 5 'Structure model' 'Atomic model' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Structure summary' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' entity_poly 5 5 'Structure model' atom_site 6 5 'Structure model' atom_site_anisotrop 7 5 'Structure model' pdbx_poly_seq_scheme 8 5 'Structure model' struct_conn 9 6 'Structure model' chem_comp_atom 10 6 'Structure model' chem_comp_bond 11 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 3 'Structure model' '_citation_author.identifier_ORCID' 6 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 7 5 'Structure model' '_atom_site.pdbx_PDB_ins_code' 8 5 'Structure model' '_atom_site_anisotrop.pdbx_PDB_ins_code' 9 5 'Structure model' '_pdbx_poly_seq_scheme.pdb_ins_code' 10 5 'Structure model' '_struct_conn.pdbx_ptnr2_PDB_ins_code' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -123.4077 16.7106 27.6467 0.3668 ? 0.0334 ? -0.0161 ? 0.2098 ? 0.0284 ? 0.2464 ? 2.4940 ? 0.0735 ? -0.3948 ? 1.2149 ? 0.5528 ? 1.1016 ? 0.1437 ? 0.2270 ? -0.0077 ? -0.2841 ? -0.0501 ? -0.1106 ? -0.1165 ? 0.1194 ? -0.0874 ? 2 'X-RAY DIFFRACTION' ? refined -133.3220 49.6374 27.2870 0.3093 ? 0.0132 ? 0.0042 ? 0.2008 ? 0.0110 ? 0.2712 ? 2.1630 ? 0.3763 ? 0.7125 ? 2.6528 ? 0.0286 ? 2.3229 ? 0.0944 ? 0.1154 ? 0.0774 ? -0.3417 ? -0.0123 ? 0.0282 ? 0.1167 ? -0.2720 ? -0.0778 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? '(chain A and resid 1:76)' 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? '(chain B and resid 1:76)' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.18.2_3874: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 7VNV _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P A G 1 ? ? OP3 A G 1 ? ? 1.483 1.607 -0.124 0.012 N 2 1 P B G 1 ? ? OP3 B G 1 ? ? 1.484 1.607 -0.123 0.012 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1MA P P N N 1 1MA OP1 O N N 2 1MA OP2 O N N 3 1MA OP3 O N N 4 1MA "O5'" O N N 5 1MA "C5'" C N N 6 1MA "C4'" C N R 7 1MA "O4'" O N N 8 1MA "C3'" C N S 9 1MA "O3'" O N N 10 1MA "C2'" C N R 11 1MA "O2'" O N N 12 1MA "C1'" C N R 13 1MA N9 N Y N 14 1MA C8 C Y N 15 1MA N7 N Y N 16 1MA C5 C Y N 17 1MA C6 C N N 18 1MA N6 N N N 19 1MA N1 N N N 20 1MA CM1 C N N 21 1MA C2 C N N 22 1MA N3 N N N 23 1MA C4 C Y N 24 1MA HOP2 H N N 25 1MA HOP3 H N N 26 1MA "H5'" H N N 27 1MA "H5''" H N N 28 1MA "H4'" H N N 29 1MA "H3'" H N N 30 1MA "HO3'" H N N 31 1MA "H2'" H N N 32 1MA "HO2'" H N N 33 1MA "H1'" H N N 34 1MA H8 H N N 35 1MA HN61 H N N 36 1MA HM11 H N N 37 1MA HM12 H N N 38 1MA HM13 H N N 39 1MA H2 H N N 40 2MG P P N N 41 2MG OP1 O N N 42 2MG OP2 O N N 43 2MG OP3 O N N 44 2MG "O5'" O N N 45 2MG "C5'" C N N 46 2MG "C4'" C N R 47 2MG "O4'" O N N 48 2MG "C3'" C N S 49 2MG "O3'" O N N 50 2MG "C2'" C N R 51 2MG "O2'" O N N 52 2MG "C1'" C N R 53 2MG N9 N Y N 54 2MG C8 C Y N 55 2MG N7 N Y N 56 2MG C5 C Y N 57 2MG C6 C N N 58 2MG O6 O N N 59 2MG N1 N N N 60 2MG C2 C N N 61 2MG N2 N N N 62 2MG CM2 C N N 63 2MG N3 N N N 64 2MG C4 C Y N 65 2MG HOP2 H N N 66 2MG HOP3 H N N 67 2MG "H5'" H N N 68 2MG "H5''" H N N 69 2MG "H4'" H N N 70 2MG "H3'" H N N 71 2MG "HO3'" H N N 72 2MG "H2'" H N N 73 2MG "HO2'" H N N 74 2MG "H1'" H N N 75 2MG H8 H N N 76 2MG HN1 H N N 77 2MG HN2 H N N 78 2MG HM21 H N N 79 2MG HM22 H N N 80 2MG HM23 H N N 81 4AC OP3 O N N 82 4AC P P N N 83 4AC OP1 O N N 84 4AC OP2 O N N 85 4AC "O5'" O N N 86 4AC "C5'" C N N 87 4AC "C4'" C N R 88 4AC "O4'" O N N 89 4AC "C3'" C N S 90 4AC "O3'" O N N 91 4AC "C2'" C N R 92 4AC "O2'" O N N 93 4AC "C1'" C N R 94 4AC N1 N N N 95 4AC C2 C N N 96 4AC O2 O N N 97 4AC N3 N N N 98 4AC C4 C N N 99 4AC N4 N N N 100 4AC C5 C N N 101 4AC C6 C N N 102 4AC C7 C N N 103 4AC O7 O N N 104 4AC CM7 C N N 105 4AC HOP3 H N N 106 4AC HOP2 H N N 107 4AC "H5'" H N N 108 4AC "H5''" H N N 109 4AC "H4'" H N N 110 4AC "H3'" H N N 111 4AC "HO3'" H N N 112 4AC "H2'" H N N 113 4AC "HO2'" H N N 114 4AC "H1'" H N N 115 4AC H4 H N N 116 4AC H5 H N N 117 4AC H6 H N N 118 4AC HM71 H N N 119 4AC HM72 H N N 120 4AC HM73 H N N 121 4SU N1 N N N 122 4SU C2 C N N 123 4SU N3 N N N 124 4SU C4 C N N 125 4SU C5 C N N 126 4SU C6 C N N 127 4SU O2 O N N 128 4SU S4 S N N 129 4SU "C1'" C N R 130 4SU "C2'" C N R 131 4SU "O2'" O N N 132 4SU "C3'" C N S 133 4SU "C4'" C N R 134 4SU "O3'" O N N 135 4SU "O4'" O N N 136 4SU "C5'" C N N 137 4SU "O5'" O N N 138 4SU P P N N 139 4SU OP1 O N N 140 4SU OP2 O N N 141 4SU OP3 O N N 142 4SU HN3 H N N 143 4SU H5 H N N 144 4SU H6 H N N 145 4SU "H1'" H N N 146 4SU "H2'" H N N 147 4SU "HO2'" H N N 148 4SU "H3'" H N N 149 4SU "H4'" H N N 150 4SU "HO3'" H N N 151 4SU "H5'" H N N 152 4SU "H5''" H N N 153 4SU HOP2 H N N 154 4SU HOP3 H N N 155 5MC P P N N 156 5MC OP1 O N N 157 5MC OP2 O N N 158 5MC OP3 O N N 159 5MC "O5'" O N N 160 5MC "C5'" C N N 161 5MC "C4'" C N R 162 5MC "O4'" O N N 163 5MC "C3'" C N S 164 5MC "O3'" O N N 165 5MC "C2'" C N R 166 5MC "O2'" O N N 167 5MC "C1'" C N R 168 5MC N1 N N N 169 5MC C2 C N N 170 5MC O2 O N N 171 5MC N3 N N N 172 5MC C4 C N N 173 5MC N4 N N N 174 5MC C5 C N N 175 5MC C6 C N N 176 5MC CM5 C N N 177 5MC HOP2 H N N 178 5MC HOP3 H N N 179 5MC "H5'" H N N 180 5MC "H5''" H N N 181 5MC "H4'" H N N 182 5MC "H3'" H N N 183 5MC "HO3'" H N N 184 5MC "H2'" H N N 185 5MC "HO2'" H N N 186 5MC "H1'" H N N 187 5MC HN41 H N N 188 5MC HN42 H N N 189 5MC H6 H N N 190 5MC HM51 H N N 191 5MC HM52 H N N 192 5MC HM53 H N N 193 7S3 C2 C N N 194 7S3 C4 C Y N 195 7S3 "C1'" C N R 196 7S3 "C2'" C N R 197 7S3 "C3'" C N S 198 7S3 "C4'" C N R 199 7S3 C5 C Y N 200 7S3 "C5'" C N N 201 7S3 C6 C N N 202 7S3 C8 C Y N 203 7S3 CM1 C N N 204 7S3 N1 N N N 205 7S3 N3 N N N 206 7S3 N7 N Y N 207 7S3 N9 N Y N 208 7S3 "O2'" O N N 209 7S3 "O3'" O N N 210 7S3 "O4'" O N N 211 7S3 "O5'" O N N 212 7S3 O6 O N N 213 7S3 OP1 O N N 214 7S3 OP2 O N N 215 7S3 P P N N 216 7S3 OP3 O N N 217 7S3 "H1'" H N N 218 7S3 H1 H N N 219 7S3 "H2'" H N N 220 7S3 "H3'" H N N 221 7S3 "H4'" H N N 222 7S3 "H5'" H N N 223 7S3 "H5''" H N N 224 7S3 H8 H N N 225 7S3 H9 H N N 226 7S3 H10 H N N 227 7S3 H11 H N N 228 7S3 "HO2'" H N N 229 7S3 "HO3'" H N N 230 7S3 HOP2 H N N 231 7S3 HOP3 H N N 232 7SN N3 N N N 233 7SN C4 C Y N 234 7SN N2 N N N 235 7SN C7 C Y N 236 7SN C6 C N N 237 7SN C8 C Y N 238 7SN C2 C N N 239 7SN C5 C Y N 240 7SN N1 N N N 241 7SN "C1'" C N R 242 7SN "C2'" C N R 243 7SN "C3'" C N S 244 7SN "C4'" C N R 245 7SN "C5'" C N N 246 7SN CA7 C N N 247 7SN N71 N N N 248 7SN N72 N N N 249 7SN N9 N Y N 250 7SN "O2'" O N N 251 7SN "O3'" O N N 252 7SN "O4'" O N N 253 7SN "O5'" O N N 254 7SN O6 O N N 255 7SN OP1 O N N 256 7SN OP2 O N N 257 7SN P P N N 258 7SN H1 H N N 259 7SN H2 H N N 260 7SN H3 H N N 261 7SN H4 H N N 262 7SN H5 H N N 263 7SN H6 H N N 264 7SN H7 H N N 265 7SN H8 H N N 266 7SN H9 H N N 267 7SN H10 H N N 268 7SN H11 H N N 269 7SN H12 H N N 270 7SN H13 H N N 271 7SN H14 H N N 272 7SN H15 H N N 273 7SN H17 H N N 274 7SN OP3 O N N 275 7SN H16 H N N 276 9QV "O5'" O N N 277 9QV "C5'" C N N 278 9QV "C4'" C N R 279 9QV "O4'" O N N 280 9QV "C1'" C N R 281 9QV N1 N N N 282 9QV C6 C N N 283 9QV C5 C N N 284 9QV C4 C N N 285 9QV O4 O N N 286 9QV N3 N N N 287 9QV C2 C N N 288 9QV O2 O N N 289 9QV "C2'" C N R 290 9QV "O2'" O N N 291 9QV P P N N 292 9QV O3P O N N 293 9QV O2P O N N 294 9QV O1P O N N 295 9QV "C3'" C N R 296 9QV "O3'" O N N 297 9QV P1 P N N 298 9QV OP1 O N N 299 9QV OP2 O N N 300 9QV H1 H N N 301 9QV H2 H N N 302 9QV H3 H N N 303 9QV H4 H N N 304 9QV H5 H N N 305 9QV H6 H N N 306 9QV H7 H N N 307 9QV H8 H N N 308 9QV H9 H N N 309 9QV H10 H N N 310 9QV H11 H N N 311 9QV H12 H N N 312 9QV H14 H N N 313 9QV OP3 O N N 314 9QV H16 H N N 315 A OP3 O N N 316 A P P N N 317 A OP1 O N N 318 A OP2 O N N 319 A "O5'" O N N 320 A "C5'" C N N 321 A "C4'" C N R 322 A "O4'" O N N 323 A "C3'" C N S 324 A "O3'" O N N 325 A "C2'" C N R 326 A "O2'" O N N 327 A "C1'" C N R 328 A N9 N Y N 329 A C8 C Y N 330 A N7 N Y N 331 A C5 C Y N 332 A C6 C Y N 333 A N6 N N N 334 A N1 N Y N 335 A C2 C Y N 336 A N3 N Y N 337 A C4 C Y N 338 A HOP3 H N N 339 A HOP2 H N N 340 A "H5'" H N N 341 A "H5''" H N N 342 A "H4'" H N N 343 A "H3'" H N N 344 A "HO3'" H N N 345 A "H2'" H N N 346 A "HO2'" H N N 347 A "H1'" H N N 348 A H8 H N N 349 A H61 H N N 350 A H62 H N N 351 A H2 H N N 352 C OP3 O N N 353 C P P N N 354 C OP1 O N N 355 C OP2 O N N 356 C "O5'" O N N 357 C "C5'" C N N 358 C "C4'" C N R 359 C "O4'" O N N 360 C "C3'" C N S 361 C "O3'" O N N 362 C "C2'" C N R 363 C "O2'" O N N 364 C "C1'" C N R 365 C N1 N N N 366 C C2 C N N 367 C O2 O N N 368 C N3 N N N 369 C C4 C N N 370 C N4 N N N 371 C C5 C N N 372 C C6 C N N 373 C HOP3 H N N 374 C HOP2 H N N 375 C "H5'" H N N 376 C "H5''" H N N 377 C "H4'" H N N 378 C "H3'" H N N 379 C "HO3'" H N N 380 C "H2'" H N N 381 C "HO2'" H N N 382 C "H1'" H N N 383 C H41 H N N 384 C H42 H N N 385 C H5 H N N 386 C H6 H N N 387 G OP3 O N N 388 G P P N N 389 G OP1 O N N 390 G OP2 O N N 391 G "O5'" O N N 392 G "C5'" C N N 393 G "C4'" C N R 394 G "O4'" O N N 395 G "C3'" C N S 396 G "O3'" O N N 397 G "C2'" C N R 398 G "O2'" O N N 399 G "C1'" C N R 400 G N9 N Y N 401 G C8 C Y N 402 G N7 N Y N 403 G C5 C Y N 404 G C6 C N N 405 G O6 O N N 406 G N1 N N N 407 G C2 C N N 408 G N2 N N N 409 G N3 N N N 410 G C4 C Y N 411 G HOP3 H N N 412 G HOP2 H N N 413 G "H5'" H N N 414 G "H5''" H N N 415 G "H4'" H N N 416 G "H3'" H N N 417 G "HO3'" H N N 418 G "H2'" H N N 419 G "HO2'" H N N 420 G "H1'" H N N 421 G H8 H N N 422 G H1 H N N 423 G H21 H N N 424 G H22 H N N 425 HOH O O N N 426 HOH H1 H N N 427 HOH H2 H N N 428 M2G P P N N 429 M2G OP1 O N N 430 M2G OP2 O N N 431 M2G OP3 O N N 432 M2G "O5'" O N N 433 M2G "C5'" C N N 434 M2G "C4'" C N R 435 M2G "O4'" O N N 436 M2G "C3'" C N S 437 M2G "O3'" O N N 438 M2G "C2'" C N R 439 M2G "O2'" O N N 440 M2G "C1'" C N R 441 M2G N9 N Y N 442 M2G C8 C Y N 443 M2G N7 N Y N 444 M2G C5 C Y N 445 M2G C6 C N N 446 M2G O6 O N N 447 M2G N1 N N N 448 M2G C2 C N N 449 M2G N2 N N N 450 M2G N3 N N N 451 M2G C4 C Y N 452 M2G CM1 C N N 453 M2G CM2 C N N 454 M2G HOP2 H N N 455 M2G HOP3 H N N 456 M2G "H5'" H N N 457 M2G "H5''" H N N 458 M2G "H4'" H N N 459 M2G "H3'" H N N 460 M2G "HO3'" H N N 461 M2G "H2'" H N N 462 M2G "HO2'" H N N 463 M2G "H1'" H N N 464 M2G H8 H N N 465 M2G HN1 H N N 466 M2G HM11 H N N 467 M2G HM12 H N N 468 M2G HM13 H N N 469 M2G HM21 H N N 470 M2G HM22 H N N 471 M2G HM23 H N N 472 OMC N1 N N N 473 OMC C2 C N N 474 OMC N3 N N N 475 OMC C4 C N N 476 OMC C5 C N N 477 OMC C6 C N N 478 OMC O2 O N N 479 OMC N4 N N N 480 OMC "C1'" C N R 481 OMC "C2'" C N R 482 OMC "O2'" O N N 483 OMC CM2 C N N 484 OMC "C3'" C N R 485 OMC "C4'" C N R 486 OMC "O4'" O N N 487 OMC "O3'" O N N 488 OMC "C5'" C N N 489 OMC "O5'" O N N 490 OMC P P N N 491 OMC OP1 O N N 492 OMC OP2 O N N 493 OMC OP3 O N N 494 OMC H5 H N N 495 OMC H6 H N N 496 OMC HN41 H N N 497 OMC HN42 H N N 498 OMC "H1'" H N N 499 OMC "H2'" H N N 500 OMC HM21 H N N 501 OMC HM22 H N N 502 OMC HM23 H N N 503 OMC "H3'" H N N 504 OMC "H4'" H N N 505 OMC "HO3'" H N N 506 OMC "H5'" H N N 507 OMC "H5''" H N N 508 OMC HOP2 H N N 509 OMC HOP3 H N N 510 OMU N1 N N N 511 OMU C2 C N N 512 OMU N3 N N N 513 OMU C4 C N N 514 OMU C5 C N N 515 OMU C6 C N N 516 OMU O2 O N N 517 OMU O4 O N N 518 OMU "C1'" C N R 519 OMU "C2'" C N R 520 OMU "O2'" O N N 521 OMU CM2 C N N 522 OMU "C3'" C N R 523 OMU "C4'" C N R 524 OMU "O3'" O N N 525 OMU "O4'" O N N 526 OMU "C5'" C N N 527 OMU "O5'" O N N 528 OMU P P N N 529 OMU OP1 O N N 530 OMU OP2 O N N 531 OMU OP3 O N N 532 OMU HN3 H N N 533 OMU H5 H N N 534 OMU H6 H N N 535 OMU "H1'" H N N 536 OMU "H2'" H N N 537 OMU HM21 H N N 538 OMU HM22 H N N 539 OMU HM23 H N N 540 OMU "H3'" H N N 541 OMU "H4'" H N N 542 OMU "HO3'" H N N 543 OMU "H5'" H N N 544 OMU "H5''" H N N 545 OMU HOP2 H N N 546 OMU HOP3 H N N 547 PSU N1 N N N 548 PSU C2 C N N 549 PSU N3 N N N 550 PSU C4 C N N 551 PSU C5 C N N 552 PSU C6 C N N 553 PSU O2 O N N 554 PSU O4 O N N 555 PSU "C1'" C N S 556 PSU "C2'" C N R 557 PSU "O2'" O N N 558 PSU "C3'" C N S 559 PSU "C4'" C N R 560 PSU "O3'" O N N 561 PSU "O4'" O N N 562 PSU "C5'" C N N 563 PSU "O5'" O N N 564 PSU P P N N 565 PSU OP1 O N N 566 PSU OP2 O N N 567 PSU OP3 O N N 568 PSU HN1 H N N 569 PSU HN3 H N N 570 PSU H6 H N N 571 PSU "H1'" H N N 572 PSU "H2'" H N N 573 PSU "HO2'" H N N 574 PSU "H3'" H N N 575 PSU "H4'" H N N 576 PSU "HO3'" H N N 577 PSU "H5'" H N N 578 PSU "H5''" H N N 579 PSU HOP2 H N N 580 PSU HOP3 H N N 581 SUR P P N N 582 SUR OP1 O N N 583 SUR OP2 O N N 584 SUR OP3 O N N 585 SUR "O5'" O N N 586 SUR "C5'" C N N 587 SUR "C4'" C N R 588 SUR "O4'" O N N 589 SUR "C3'" C N S 590 SUR "C1'" C N R 591 SUR N1 N N N 592 SUR "C2'" C N R 593 SUR C6 C N N 594 SUR C2 C N N 595 SUR C5 C N N 596 SUR S2 S N N 597 SUR N3 N N N 598 SUR C4 C N N 599 SUR O4 O N N 600 SUR "O2'" O N N 601 SUR "O3'" O N N 602 SUR HOP1 H N N 603 SUR HOP3 H N N 604 SUR "H5'1" H N N 605 SUR "H5'2" H N N 606 SUR "H4'" H N N 607 SUR "H3'" H N N 608 SUR "H1'" H N N 609 SUR "H2'" H N N 610 SUR HC6 H N N 611 SUR HC5 H N N 612 SUR HN3 H N N 613 SUR HO2 H N N 614 SUR HO3 H N N 615 U OP3 O N N 616 U P P N N 617 U OP1 O N N 618 U OP2 O N N 619 U "O5'" O N N 620 U "C5'" C N N 621 U "C4'" C N R 622 U "O4'" O N N 623 U "C3'" C N S 624 U "O3'" O N N 625 U "C2'" C N R 626 U "O2'" O N N 627 U "C1'" C N R 628 U N1 N N N 629 U C2 C N N 630 U O2 O N N 631 U N3 N N N 632 U C4 C N N 633 U O4 O N N 634 U C5 C N N 635 U C6 C N N 636 U HOP3 H N N 637 U HOP2 H N N 638 U "H5'" H N N 639 U "H5''" H N N 640 U "H4'" H N N 641 U "H3'" H N N 642 U "HO3'" H N N 643 U "H2'" H N N 644 U "HO2'" H N N 645 U "H1'" H N N 646 U H3 H N N 647 U H5 H N N 648 U H6 H N N 649 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1MA P OP1 doub N N 1 1MA P OP2 sing N N 2 1MA P OP3 sing N N 3 1MA P "O5'" sing N N 4 1MA OP2 HOP2 sing N N 5 1MA OP3 HOP3 sing N N 6 1MA "O5'" "C5'" sing N N 7 1MA "C5'" "C4'" sing N N 8 1MA "C5'" "H5'" sing N N 9 1MA "C5'" "H5''" sing N N 10 1MA "C4'" "O4'" sing N N 11 1MA "C4'" "C3'" sing N N 12 1MA "C4'" "H4'" sing N N 13 1MA "O4'" "C1'" sing N N 14 1MA "C3'" "O3'" sing N N 15 1MA "C3'" "C2'" sing N N 16 1MA "C3'" "H3'" sing N N 17 1MA "O3'" "HO3'" sing N N 18 1MA "C2'" "O2'" sing N N 19 1MA "C2'" "C1'" sing N N 20 1MA "C2'" "H2'" sing N N 21 1MA "O2'" "HO2'" sing N N 22 1MA "C1'" N9 sing N N 23 1MA "C1'" "H1'" sing N N 24 1MA N9 C8 sing Y N 25 1MA N9 C4 sing Y N 26 1MA C8 N7 doub Y N 27 1MA C8 H8 sing N N 28 1MA N7 C5 sing Y N 29 1MA C5 C6 sing N N 30 1MA C5 C4 doub Y N 31 1MA C6 N6 doub N N 32 1MA C6 N1 sing N N 33 1MA N6 HN61 sing N N 34 1MA N1 CM1 sing N N 35 1MA N1 C2 sing N N 36 1MA CM1 HM11 sing N N 37 1MA CM1 HM12 sing N N 38 1MA CM1 HM13 sing N N 39 1MA C2 N3 doub N N 40 1MA C2 H2 sing N N 41 1MA N3 C4 sing N N 42 2MG P OP1 doub N N 43 2MG P OP2 sing N N 44 2MG P OP3 sing N N 45 2MG P "O5'" sing N N 46 2MG OP2 HOP2 sing N N 47 2MG OP3 HOP3 sing N N 48 2MG "O5'" "C5'" sing N N 49 2MG "C5'" "C4'" sing N N 50 2MG "C5'" "H5'" sing N N 51 2MG "C5'" "H5''" sing N N 52 2MG "C4'" "O4'" sing N N 53 2MG "C4'" "C3'" sing N N 54 2MG "C4'" "H4'" sing N N 55 2MG "O4'" "C1'" sing N N 56 2MG "C3'" "O3'" sing N N 57 2MG "C3'" "C2'" sing N N 58 2MG "C3'" "H3'" sing N N 59 2MG "O3'" "HO3'" sing N N 60 2MG "C2'" "O2'" sing N N 61 2MG "C2'" "C1'" sing N N 62 2MG "C2'" "H2'" sing N N 63 2MG "O2'" "HO2'" sing N N 64 2MG "C1'" N9 sing N N 65 2MG "C1'" "H1'" sing N N 66 2MG N9 C8 sing Y N 67 2MG N9 C4 sing Y N 68 2MG C8 N7 doub Y N 69 2MG C8 H8 sing N N 70 2MG N7 C5 sing Y N 71 2MG C5 C6 sing N N 72 2MG C5 C4 doub Y N 73 2MG C6 O6 doub N N 74 2MG C6 N1 sing N N 75 2MG N1 C2 sing N N 76 2MG N1 HN1 sing N N 77 2MG C2 N2 sing N N 78 2MG C2 N3 doub N N 79 2MG N2 CM2 sing N N 80 2MG N2 HN2 sing N N 81 2MG CM2 HM21 sing N N 82 2MG CM2 HM22 sing N N 83 2MG CM2 HM23 sing N N 84 2MG N3 C4 sing N N 85 4AC OP3 P sing N N 86 4AC OP3 HOP3 sing N N 87 4AC P OP1 doub N N 88 4AC P OP2 sing N N 89 4AC P "O5'" sing N N 90 4AC OP2 HOP2 sing N N 91 4AC "O5'" "C5'" sing N N 92 4AC "C5'" "C4'" sing N N 93 4AC "C5'" "H5'" sing N N 94 4AC "C5'" "H5''" sing N N 95 4AC "C4'" "O4'" sing N N 96 4AC "C4'" "C3'" sing N N 97 4AC "C4'" "H4'" sing N N 98 4AC "O4'" "C1'" sing N N 99 4AC "C3'" "O3'" sing N N 100 4AC "C3'" "C2'" sing N N 101 4AC "C3'" "H3'" sing N N 102 4AC "O3'" "HO3'" sing N N 103 4AC "C2'" "O2'" sing N N 104 4AC "C2'" "C1'" sing N N 105 4AC "C2'" "H2'" sing N N 106 4AC "O2'" "HO2'" sing N N 107 4AC "C1'" N1 sing N N 108 4AC "C1'" "H1'" sing N N 109 4AC N1 C2 sing N N 110 4AC N1 C6 sing N N 111 4AC C2 O2 doub N N 112 4AC C2 N3 sing N N 113 4AC N3 C4 doub N N 114 4AC C4 N4 sing N N 115 4AC C4 C5 sing N N 116 4AC N4 C7 sing N N 117 4AC N4 H4 sing N N 118 4AC C5 C6 doub N N 119 4AC C5 H5 sing N N 120 4AC C6 H6 sing N N 121 4AC C7 O7 doub N N 122 4AC C7 CM7 sing N N 123 4AC CM7 HM71 sing N N 124 4AC CM7 HM72 sing N N 125 4AC CM7 HM73 sing N N 126 4SU N1 C2 sing N N 127 4SU N1 C6 sing N N 128 4SU N1 "C1'" sing N N 129 4SU C2 N3 sing N N 130 4SU C2 O2 doub N N 131 4SU N3 C4 sing N N 132 4SU N3 HN3 sing N N 133 4SU C4 C5 sing N N 134 4SU C4 S4 doub N N 135 4SU C5 C6 doub N N 136 4SU C5 H5 sing N N 137 4SU C6 H6 sing N N 138 4SU "C1'" "C2'" sing N N 139 4SU "C1'" "O4'" sing N N 140 4SU "C1'" "H1'" sing N N 141 4SU "C2'" "O2'" sing N N 142 4SU "C2'" "C3'" sing N N 143 4SU "C2'" "H2'" sing N N 144 4SU "O2'" "HO2'" sing N N 145 4SU "C3'" "C4'" sing N N 146 4SU "C3'" "O3'" sing N N 147 4SU "C3'" "H3'" sing N N 148 4SU "C4'" "O4'" sing N N 149 4SU "C4'" "C5'" sing N N 150 4SU "C4'" "H4'" sing N N 151 4SU "O3'" "HO3'" sing N N 152 4SU "C5'" "O5'" sing N N 153 4SU "C5'" "H5'" sing N N 154 4SU "C5'" "H5''" sing N N 155 4SU "O5'" P sing N N 156 4SU P OP1 doub N N 157 4SU P OP2 sing N N 158 4SU P OP3 sing N N 159 4SU OP2 HOP2 sing N N 160 4SU OP3 HOP3 sing N N 161 5MC P OP1 doub N N 162 5MC P OP2 sing N N 163 5MC P OP3 sing N N 164 5MC P "O5'" sing N N 165 5MC OP2 HOP2 sing N N 166 5MC OP3 HOP3 sing N N 167 5MC "O5'" "C5'" sing N N 168 5MC "C5'" "C4'" sing N N 169 5MC "C5'" "H5'" sing N N 170 5MC "C5'" "H5''" sing N N 171 5MC "C4'" "O4'" sing N N 172 5MC "C4'" "C3'" sing N N 173 5MC "C4'" "H4'" sing N N 174 5MC "O4'" "C1'" sing N N 175 5MC "C3'" "O3'" sing N N 176 5MC "C3'" "C2'" sing N N 177 5MC "C3'" "H3'" sing N N 178 5MC "O3'" "HO3'" sing N N 179 5MC "C2'" "O2'" sing N N 180 5MC "C2'" "C1'" sing N N 181 5MC "C2'" "H2'" sing N N 182 5MC "O2'" "HO2'" sing N N 183 5MC "C1'" N1 sing N N 184 5MC "C1'" "H1'" sing N N 185 5MC N1 C2 sing N N 186 5MC N1 C6 sing N N 187 5MC C2 O2 doub N N 188 5MC C2 N3 sing N N 189 5MC N3 C4 doub N N 190 5MC C4 N4 sing N N 191 5MC C4 C5 sing N N 192 5MC N4 HN41 sing N N 193 5MC N4 HN42 sing N N 194 5MC C5 C6 doub N N 195 5MC C5 CM5 sing N N 196 5MC C6 H6 sing N N 197 5MC CM5 HM51 sing N N 198 5MC CM5 HM52 sing N N 199 5MC CM5 HM53 sing N N 200 7S3 "O2'" "C2'" sing N N 201 7S3 "O3'" "C3'" sing N N 202 7S3 "C4'" "O4'" sing N N 203 7S3 "C4'" "C3'" sing N N 204 7S3 "C4'" "C5'" sing N N 205 7S3 "C2'" "C3'" sing N N 206 7S3 "C2'" "C1'" sing N N 207 7S3 "O4'" "C1'" sing N N 208 7S3 "C5'" "O5'" sing N N 209 7S3 "C1'" N9 sing N N 210 7S3 "O5'" P sing N N 211 7S3 N3 C4 sing N N 212 7S3 N3 C2 doub N N 213 7S3 N9 C4 sing Y N 214 7S3 N9 C8 sing Y N 215 7S3 OP1 P doub N N 216 7S3 C4 C5 doub Y N 217 7S3 P OP2 sing N N 218 7S3 C2 N1 sing N N 219 7S3 C8 N7 doub Y N 220 7S3 C5 N7 sing Y N 221 7S3 C5 C6 sing N N 222 7S3 N1 C6 sing N N 223 7S3 N1 CM1 sing N N 224 7S3 C6 O6 doub N N 225 7S3 P OP3 sing N N 226 7S3 C2 "H1'" sing N N 227 7S3 "C1'" H1 sing N N 228 7S3 "C2'" "H2'" sing N N 229 7S3 "C3'" "H3'" sing N N 230 7S3 "C4'" "H4'" sing N N 231 7S3 "C5'" "H5'" sing N N 232 7S3 "C5'" "H5''" sing N N 233 7S3 C8 H8 sing N N 234 7S3 CM1 H9 sing N N 235 7S3 CM1 H10 sing N N 236 7S3 CM1 H11 sing N N 237 7S3 "O2'" "HO2'" sing N N 238 7S3 "O3'" "HO3'" sing N N 239 7S3 OP2 HOP2 sing N N 240 7S3 OP3 HOP3 sing N N 241 7SN N2 C2 sing N N 242 7SN C2 N1 sing N N 243 7SN C2 N3 doub N N 244 7SN N1 C6 sing N N 245 7SN N3 C4 sing N N 246 7SN C6 O6 doub N N 247 7SN C6 C5 sing N N 248 7SN C4 C5 doub Y N 249 7SN C4 N9 sing Y N 250 7SN C5 C7 sing Y N 251 7SN "C1'" N9 sing N N 252 7SN "C1'" "O4'" sing N N 253 7SN "C1'" "C2'" sing N N 254 7SN N9 C8 sing Y N 255 7SN "O4'" "C4'" sing N N 256 7SN C7 C8 doub Y N 257 7SN C7 CA7 sing N N 258 7SN "O2'" "C2'" sing N N 259 7SN N71 CA7 doub N N 260 7SN CA7 N72 sing N N 261 7SN "C2'" "C3'" sing N N 262 7SN "C4'" "C5'" sing N N 263 7SN "C4'" "C3'" sing N N 264 7SN "C5'" "O5'" sing N N 265 7SN "C3'" "O3'" sing N N 266 7SN "O5'" P sing N N 267 7SN P OP2 sing N N 268 7SN P OP1 doub N N 269 7SN N2 H1 sing N N 270 7SN N2 H2 sing N N 271 7SN C8 H3 sing N N 272 7SN N1 H4 sing N N 273 7SN "C1'" H5 sing N N 274 7SN "C2'" H6 sing N N 275 7SN "C3'" H7 sing N N 276 7SN "C4'" H8 sing N N 277 7SN "C5'" H9 sing N N 278 7SN "C5'" H10 sing N N 279 7SN N71 H11 sing N N 280 7SN N72 H12 sing N N 281 7SN N72 H13 sing N N 282 7SN "O2'" H14 sing N N 283 7SN "O3'" H15 sing N N 284 7SN OP2 H17 sing N N 285 7SN P OP3 sing N N 286 7SN OP3 H16 sing N N 287 9QV O2 C2 doub N N 288 9QV N3 C2 sing N N 289 9QV N3 C4 sing N N 290 9QV C2 N1 sing N N 291 9QV O4 C4 doub N N 292 9QV C4 C5 sing N N 293 9QV N1 "C1'" sing N N 294 9QV N1 C6 sing N N 295 9QV "C1'" "O4'" sing N N 296 9QV "C1'" "C2'" sing N N 297 9QV O1P P1 doub N N 298 9QV "O4'" "C4'" sing N N 299 9QV C5 C6 doub N N 300 9QV "O2'" "C2'" sing N N 301 9QV "O2'" P1 sing N N 302 9QV O2P P1 sing N N 303 9QV "C2'" "C3'" sing N N 304 9QV P1 O3P sing N N 305 9QV "C4'" "C3'" sing N N 306 9QV "C4'" "C5'" sing N N 307 9QV "C3'" "O3'" sing N N 308 9QV "C5'" "O5'" sing N N 309 9QV OP2 P sing N N 310 9QV "O5'" P sing N N 311 9QV OP1 P doub N N 312 9QV "C5'" H1 sing N N 313 9QV "C5'" H2 sing N N 314 9QV "C4'" H3 sing N N 315 9QV "C1'" H4 sing N N 316 9QV C6 H5 sing N N 317 9QV C5 H6 sing N N 318 9QV N3 H7 sing N N 319 9QV "C2'" H8 sing N N 320 9QV O3P H9 sing N N 321 9QV O2P H10 sing N N 322 9QV "C3'" H11 sing N N 323 9QV "O3'" H12 sing N N 324 9QV OP2 H14 sing N N 325 9QV P OP3 sing N N 326 9QV OP3 H16 sing N N 327 A OP3 P sing N N 328 A OP3 HOP3 sing N N 329 A P OP1 doub N N 330 A P OP2 sing N N 331 A P "O5'" sing N N 332 A OP2 HOP2 sing N N 333 A "O5'" "C5'" sing N N 334 A "C5'" "C4'" sing N N 335 A "C5'" "H5'" sing N N 336 A "C5'" "H5''" sing N N 337 A "C4'" "O4'" sing N N 338 A "C4'" "C3'" sing N N 339 A "C4'" "H4'" sing N N 340 A "O4'" "C1'" sing N N 341 A "C3'" "O3'" sing N N 342 A "C3'" "C2'" sing N N 343 A "C3'" "H3'" sing N N 344 A "O3'" "HO3'" sing N N 345 A "C2'" "O2'" sing N N 346 A "C2'" "C1'" sing N N 347 A "C2'" "H2'" sing N N 348 A "O2'" "HO2'" sing N N 349 A "C1'" N9 sing N N 350 A "C1'" "H1'" sing N N 351 A N9 C8 sing Y N 352 A N9 C4 sing Y N 353 A C8 N7 doub Y N 354 A C8 H8 sing N N 355 A N7 C5 sing Y N 356 A C5 C6 sing Y N 357 A C5 C4 doub Y N 358 A C6 N6 sing N N 359 A C6 N1 doub Y N 360 A N6 H61 sing N N 361 A N6 H62 sing N N 362 A N1 C2 sing Y N 363 A C2 N3 doub Y N 364 A C2 H2 sing N N 365 A N3 C4 sing Y N 366 C OP3 P sing N N 367 C OP3 HOP3 sing N N 368 C P OP1 doub N N 369 C P OP2 sing N N 370 C P "O5'" sing N N 371 C OP2 HOP2 sing N N 372 C "O5'" "C5'" sing N N 373 C "C5'" "C4'" sing N N 374 C "C5'" "H5'" sing N N 375 C "C5'" "H5''" sing N N 376 C "C4'" "O4'" sing N N 377 C "C4'" "C3'" sing N N 378 C "C4'" "H4'" sing N N 379 C "O4'" "C1'" sing N N 380 C "C3'" "O3'" sing N N 381 C "C3'" "C2'" sing N N 382 C "C3'" "H3'" sing N N 383 C "O3'" "HO3'" sing N N 384 C "C2'" "O2'" sing N N 385 C "C2'" "C1'" sing N N 386 C "C2'" "H2'" sing N N 387 C "O2'" "HO2'" sing N N 388 C "C1'" N1 sing N N 389 C "C1'" "H1'" sing N N 390 C N1 C2 sing N N 391 C N1 C6 sing N N 392 C C2 O2 doub N N 393 C C2 N3 sing N N 394 C N3 C4 doub N N 395 C C4 N4 sing N N 396 C C4 C5 sing N N 397 C N4 H41 sing N N 398 C N4 H42 sing N N 399 C C5 C6 doub N N 400 C C5 H5 sing N N 401 C C6 H6 sing N N 402 G OP3 P sing N N 403 G OP3 HOP3 sing N N 404 G P OP1 doub N N 405 G P OP2 sing N N 406 G P "O5'" sing N N 407 G OP2 HOP2 sing N N 408 G "O5'" "C5'" sing N N 409 G "C5'" "C4'" sing N N 410 G "C5'" "H5'" sing N N 411 G "C5'" "H5''" sing N N 412 G "C4'" "O4'" sing N N 413 G "C4'" "C3'" sing N N 414 G "C4'" "H4'" sing N N 415 G "O4'" "C1'" sing N N 416 G "C3'" "O3'" sing N N 417 G "C3'" "C2'" sing N N 418 G "C3'" "H3'" sing N N 419 G "O3'" "HO3'" sing N N 420 G "C2'" "O2'" sing N N 421 G "C2'" "C1'" sing N N 422 G "C2'" "H2'" sing N N 423 G "O2'" "HO2'" sing N N 424 G "C1'" N9 sing N N 425 G "C1'" "H1'" sing N N 426 G N9 C8 sing Y N 427 G N9 C4 sing Y N 428 G C8 N7 doub Y N 429 G C8 H8 sing N N 430 G N7 C5 sing Y N 431 G C5 C6 sing N N 432 G C5 C4 doub Y N 433 G C6 O6 doub N N 434 G C6 N1 sing N N 435 G N1 C2 sing N N 436 G N1 H1 sing N N 437 G C2 N2 sing N N 438 G C2 N3 doub N N 439 G N2 H21 sing N N 440 G N2 H22 sing N N 441 G N3 C4 sing N N 442 HOH O H1 sing N N 443 HOH O H2 sing N N 444 M2G P OP1 doub N N 445 M2G P OP2 sing N N 446 M2G P OP3 sing N N 447 M2G P "O5'" sing N N 448 M2G OP2 HOP2 sing N N 449 M2G OP3 HOP3 sing N N 450 M2G "O5'" "C5'" sing N N 451 M2G "C5'" "C4'" sing N N 452 M2G "C5'" "H5'" sing N N 453 M2G "C5'" "H5''" sing N N 454 M2G "C4'" "O4'" sing N N 455 M2G "C4'" "C3'" sing N N 456 M2G "C4'" "H4'" sing N N 457 M2G "O4'" "C1'" sing N N 458 M2G "C3'" "O3'" sing N N 459 M2G "C3'" "C2'" sing N N 460 M2G "C3'" "H3'" sing N N 461 M2G "O3'" "HO3'" sing N N 462 M2G "C2'" "O2'" sing N N 463 M2G "C2'" "C1'" sing N N 464 M2G "C2'" "H2'" sing N N 465 M2G "O2'" "HO2'" sing N N 466 M2G "C1'" N9 sing N N 467 M2G "C1'" "H1'" sing N N 468 M2G N9 C8 sing Y N 469 M2G N9 C4 sing Y N 470 M2G C8 N7 doub Y N 471 M2G C8 H8 sing N N 472 M2G N7 C5 sing Y N 473 M2G C5 C6 sing N N 474 M2G C5 C4 doub Y N 475 M2G C6 O6 doub N N 476 M2G C6 N1 sing N N 477 M2G N1 C2 sing N N 478 M2G N1 HN1 sing N N 479 M2G C2 N2 sing N N 480 M2G C2 N3 doub N N 481 M2G N2 CM1 sing N N 482 M2G N2 CM2 sing N N 483 M2G N3 C4 sing N N 484 M2G CM1 HM11 sing N N 485 M2G CM1 HM12 sing N N 486 M2G CM1 HM13 sing N N 487 M2G CM2 HM21 sing N N 488 M2G CM2 HM22 sing N N 489 M2G CM2 HM23 sing N N 490 OMC N1 C2 sing N N 491 OMC N1 C6 sing N N 492 OMC N1 "C1'" sing N N 493 OMC C2 N3 sing N N 494 OMC C2 O2 doub N N 495 OMC N3 C4 doub N N 496 OMC C4 C5 sing N N 497 OMC C4 N4 sing N N 498 OMC C5 C6 doub N N 499 OMC C5 H5 sing N N 500 OMC C6 H6 sing N N 501 OMC N4 HN41 sing N N 502 OMC N4 HN42 sing N N 503 OMC "C1'" "C2'" sing N N 504 OMC "C1'" "O4'" sing N N 505 OMC "C1'" "H1'" sing N N 506 OMC "C2'" "O2'" sing N N 507 OMC "C2'" "C3'" sing N N 508 OMC "C2'" "H2'" sing N N 509 OMC "O2'" CM2 sing N N 510 OMC CM2 HM21 sing N N 511 OMC CM2 HM22 sing N N 512 OMC CM2 HM23 sing N N 513 OMC "C3'" "C4'" sing N N 514 OMC "C3'" "O3'" sing N N 515 OMC "C3'" "H3'" sing N N 516 OMC "C4'" "O4'" sing N N 517 OMC "C4'" "C5'" sing N N 518 OMC "C4'" "H4'" sing N N 519 OMC "O3'" "HO3'" sing N N 520 OMC "C5'" "O5'" sing N N 521 OMC "C5'" "H5'" sing N N 522 OMC "C5'" "H5''" sing N N 523 OMC "O5'" P sing N N 524 OMC P OP1 doub N N 525 OMC P OP2 sing N N 526 OMC P OP3 sing N N 527 OMC OP2 HOP2 sing N N 528 OMC OP3 HOP3 sing N N 529 OMU N1 C2 sing N N 530 OMU N1 C6 sing N N 531 OMU N1 "C1'" sing N N 532 OMU C2 N3 sing N N 533 OMU C2 O2 doub N N 534 OMU N3 C4 sing N N 535 OMU N3 HN3 sing N N 536 OMU C4 C5 sing N N 537 OMU C4 O4 doub N N 538 OMU C5 C6 doub N N 539 OMU C5 H5 sing N N 540 OMU C6 H6 sing N N 541 OMU "C1'" "C2'" sing N N 542 OMU "C1'" "O4'" sing N N 543 OMU "C1'" "H1'" sing N N 544 OMU "C2'" "O2'" sing N N 545 OMU "C2'" "C3'" sing N N 546 OMU "C2'" "H2'" sing N N 547 OMU "O2'" CM2 sing N N 548 OMU CM2 HM21 sing N N 549 OMU CM2 HM22 sing N N 550 OMU CM2 HM23 sing N N 551 OMU "C3'" "C4'" sing N N 552 OMU "C3'" "O3'" sing N N 553 OMU "C3'" "H3'" sing N N 554 OMU "C4'" "O4'" sing N N 555 OMU "C4'" "C5'" sing N N 556 OMU "C4'" "H4'" sing N N 557 OMU "O3'" "HO3'" sing N N 558 OMU "C5'" "O5'" sing N N 559 OMU "C5'" "H5'" sing N N 560 OMU "C5'" "H5''" sing N N 561 OMU "O5'" P sing N N 562 OMU P OP1 doub N N 563 OMU P OP2 sing N N 564 OMU P OP3 sing N N 565 OMU OP2 HOP2 sing N N 566 OMU OP3 HOP3 sing N N 567 PSU N1 C2 sing N N 568 PSU N1 C6 sing N N 569 PSU N1 HN1 sing N N 570 PSU C2 N3 sing N N 571 PSU C2 O2 doub N N 572 PSU N3 C4 sing N N 573 PSU N3 HN3 sing N N 574 PSU C4 C5 sing N N 575 PSU C4 O4 doub N N 576 PSU C5 C6 doub N N 577 PSU C5 "C1'" sing N N 578 PSU C6 H6 sing N N 579 PSU "C1'" "C2'" sing N N 580 PSU "C1'" "O4'" sing N N 581 PSU "C1'" "H1'" sing N N 582 PSU "C2'" "O2'" sing N N 583 PSU "C2'" "C3'" sing N N 584 PSU "C2'" "H2'" sing N N 585 PSU "O2'" "HO2'" sing N N 586 PSU "C3'" "C4'" sing N N 587 PSU "C3'" "O3'" sing N N 588 PSU "C3'" "H3'" sing N N 589 PSU "C4'" "O4'" sing N N 590 PSU "C4'" "C5'" sing N N 591 PSU "C4'" "H4'" sing N N 592 PSU "O3'" "HO3'" sing N N 593 PSU "C5'" "O5'" sing N N 594 PSU "C5'" "H5'" sing N N 595 PSU "C5'" "H5''" sing N N 596 PSU "O5'" P sing N N 597 PSU P OP1 doub N N 598 PSU P OP2 sing N N 599 PSU P OP3 sing N N 600 PSU OP2 HOP2 sing N N 601 PSU OP3 HOP3 sing N N 602 SUR P OP1 sing N N 603 SUR P OP2 doub N N 604 SUR P OP3 sing N N 605 SUR P "O5'" sing N N 606 SUR OP1 HOP1 sing N N 607 SUR OP3 HOP3 sing N N 608 SUR "O5'" "C5'" sing N N 609 SUR "C5'" "C4'" sing N N 610 SUR "C5'" "H5'1" sing N N 611 SUR "C5'" "H5'2" sing N N 612 SUR "C4'" "O4'" sing N N 613 SUR "C4'" "C3'" sing N N 614 SUR "C4'" "H4'" sing N N 615 SUR "O4'" "C1'" sing N N 616 SUR "C3'" "C2'" sing N N 617 SUR "C3'" "O3'" sing N N 618 SUR "C3'" "H3'" sing N N 619 SUR "C1'" N1 sing N N 620 SUR "C1'" "C2'" sing N N 621 SUR "C1'" "H1'" sing N N 622 SUR N1 C6 sing N N 623 SUR N1 C2 sing N N 624 SUR "C2'" "O2'" sing N N 625 SUR "C2'" "H2'" sing N N 626 SUR C6 C5 doub N N 627 SUR C6 HC6 sing N N 628 SUR C2 S2 doub N N 629 SUR C2 N3 sing N N 630 SUR C5 C4 sing N N 631 SUR C5 HC5 sing N N 632 SUR N3 C4 sing N N 633 SUR N3 HN3 sing N N 634 SUR C4 O4 doub N N 635 SUR "O2'" HO2 sing N N 636 SUR "O3'" HO3 sing N N 637 U OP3 P sing N N 638 U OP3 HOP3 sing N N 639 U P OP1 doub N N 640 U P OP2 sing N N 641 U P "O5'" sing N N 642 U OP2 HOP2 sing N N 643 U "O5'" "C5'" sing N N 644 U "C5'" "C4'" sing N N 645 U "C5'" "H5'" sing N N 646 U "C5'" "H5''" sing N N 647 U "C4'" "O4'" sing N N 648 U "C4'" "C3'" sing N N 649 U "C4'" "H4'" sing N N 650 U "O4'" "C1'" sing N N 651 U "C3'" "O3'" sing N N 652 U "C3'" "C2'" sing N N 653 U "C3'" "H3'" sing N N 654 U "O3'" "HO3'" sing N N 655 U "C2'" "O2'" sing N N 656 U "C2'" "C1'" sing N N 657 U "C2'" "H2'" sing N N 658 U "O2'" "HO2'" sing N N 659 U "C1'" N1 sing N N 660 U "C1'" "H1'" sing N N 661 U N1 C2 sing N N 662 U N1 C6 sing N N 663 U C2 O2 doub N N 664 U C2 N3 sing N N 665 U N3 C4 sing N N 666 U N3 H3 sing N N 667 U C4 O4 doub N N 668 U C4 C5 sing N N 669 U C5 C6 doub N N 670 U C5 H5 sing N N 671 U C6 H6 sing N N 672 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7VNV 'double helix' 7VNV 'a-form double helix' 7VNV 'parallel strands' 7VNV 'hairpin loop' 7VNV 'mismatched base pair' 7VNV 'four-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 74 1_555 -0.180 -0.153 -0.012 -5.857 -5.833 0.011 1 A_G1:C72_A A 1 ? A 72 ? 19 1 1 A G 2 1_555 A C 73 1_555 -0.216 -0.105 -0.196 -8.740 -6.623 -0.822 2 A_G2:C71_A A 2 ? A 71 ? 19 1 1 A G 3 1_555 A C 72 1_555 -0.260 -0.200 0.006 -5.366 -8.911 0.948 3 A_G3:C70_A A 3 ? A 70 ? 19 1 1 A C 4 1_555 A G 71 1_555 0.091 -0.062 0.174 -1.318 -5.940 -0.605 4 A_C4:G69_A A 4 ? A 69 ? 19 1 1 A C 5 1_555 A G 70 1_555 0.529 -0.155 0.091 7.416 -8.851 1.029 5 A_C5:G68_A A 5 ? A 68 ? 19 1 1 A G 7 1_555 A C 68 1_555 -0.200 -0.114 -0.123 -5.917 -8.577 -0.053 6 A_G7:C66_A A 7 ? A 66 ? 19 1 1 A 5MC 51 1_555 A G 67 1_555 0.306 -0.087 -0.088 1.645 -7.374 0.743 7 A_5MC49:G65_A A 49 ? A 65 ? 19 1 1 A U 52 1_555 A A 66 1_555 -0.038 -0.208 0.216 -2.186 -5.189 1.877 8 A_U50:A64_A A 50 ? A 64 ? 20 1 1 A G 53 1_555 A C 65 1_555 -0.298 -0.225 -0.069 -1.323 -6.503 -1.582 9 A_G51:C63_A A 51 ? A 63 ? 19 1 1 A G 54 1_555 A C 64 1_555 -0.188 -0.161 -0.225 -4.957 -7.723 0.105 10 A_G52:C62_A A 52 ? A 62 ? 19 1 1 A G 55 1_555 A C 63 1_555 -0.123 -0.157 -0.410 -15.563 -7.024 -1.089 11 A_G53:C61_A A 53 ? A 61 ? 19 1 1 A SUR 56 1_555 A 1MA 60 1_555 4.287 -1.689 0.587 -3.613 12.969 -107.906 12 A_SUR54:1MA58_A A 54 ? A 58 ? ? ? 1 A PSU 57 1_555 A G 19 1_555 0.384 -5.412 0.470 18.285 18.807 -101.388 13 A_PSU55:G18_A A 55 ? A 18 ? ? 2 1 A A 40 1_555 A OMC 34 1_555 -5.312 -1.275 0.125 -1.815 6.303 -4.673 14 A_A38:OMC32_A A 38 ? A 32 ? ? ? 1 A G 41 1_555 A C 33 1_555 -0.163 -0.111 0.135 4.548 0.666 1.069 15 A_G39:C31_A A 39 ? A 31 ? 19 1 1 A G 42 1_555 A C 32 1_555 -0.202 -0.186 -0.354 3.075 -6.720 1.466 16 A_G40:C30_A A 40 ? A 30 ? 19 1 1 A C 43 1_555 A G 31 1_555 0.183 -0.141 -0.076 1.367 -7.136 0.013 17 A_C41:G29_A A 41 ? A 29 ? 19 1 1 A G 44 1_555 A C 30 1_555 -0.179 -0.154 0.230 -3.994 -11.041 -0.627 18 A_G42:C28_A A 42 ? A 28 ? 19 1 1 A G 45 1_555 A C 29 1_555 -0.086 -0.136 0.281 -6.221 -13.568 -1.352 19 A_G43:C27_A A 43 ? A 27 ? 19 1 1 A A 46 1_555 A M2G 28 1_555 0.759 1.746 -0.211 -25.462 -18.638 -17.445 20 A_A44:M2G26_A A 44 ? A 26 ? 8 1 1 A 2MG 10 1_555 A C 27 1_555 -0.341 -0.168 -0.060 -5.162 -5.963 1.291 21 A_2MG10:C25_A A 10 ? A 25 ? 19 1 1 A U 11 1_555 A A 26 1_555 -0.088 -0.140 0.161 -6.791 -6.904 3.376 22 A_U11:A24_A A 11 ? A 24 ? 20 1 1 A C 12 1_555 A G 25 1_555 0.195 -0.229 0.059 -1.461 -5.977 -5.123 23 A_C12:G23_A A 12 ? A 23 ? 19 1 1 A PSU 13 1_555 A G 24 1_555 2.056 -0.543 -0.077 6.505 -8.843 -5.753 24 A_PSU13:G22_A A 13 ? A 22 ? 27 1 1 A A 14 1_555 A 4SU 8 1_555 -4.238 -2.223 0.667 1.748 14.792 -96.917 25 A_A14:4SU8_A A 14 ? A 8 ? 24 4 1 A 7SN 15 1_555 A 5MC 50 1_555 0.132 3.614 0.169 -6.325 1.824 156.098 26 A_7SN15:5MC48_A A 15 ? A 48 ? 22 2 1 A C 16 1_555 A G 61 1_555 -3.859 -7.861 1.764 47.436 -9.100 -151.476 27 A_C16:G59_A A 16 ? A 59 ? ? ? 1 A G 20 1_555 A OMC 58 1_555 -0.391 -0.150 0.047 -24.622 -26.436 -0.713 28 A_G19:OMC56_A A 19 ? A 56 ? 19 1 1 B G 1 1_555 B C 74 1_555 -0.218 -0.154 -0.170 -8.056 -7.612 2.821 29 B_G1:C72_B B 1 ? B 72 ? 19 1 1 B G 2 1_555 B C 73 1_555 -0.149 -0.133 -0.314 -6.665 -2.440 -3.313 30 B_G2:C71_B B 2 ? B 71 ? 19 1 1 B G 3 1_555 B C 72 1_555 -0.194 -0.142 0.005 -0.865 -3.036 -0.099 31 B_G3:C70_B B 3 ? B 70 ? 19 1 1 B C 4 1_555 B G 71 1_555 0.226 -0.162 0.054 4.255 -4.633 -0.592 32 B_C4:G69_B B 4 ? B 69 ? 19 1 1 B C 5 1_555 B G 70 1_555 0.276 -0.210 0.195 6.921 -8.639 0.162 33 B_C5:G68_B B 5 ? B 68 ? 19 1 1 B G 7 1_555 B C 68 1_555 -0.171 -0.120 0.070 -3.893 -7.918 1.837 34 B_G7:C66_B B 7 ? B 66 ? 19 1 1 B 5MC 51 1_555 B G 67 1_555 0.263 -0.212 0.066 2.355 -9.165 -1.617 35 B_5MC49:G65_B B 49 ? B 65 ? 19 1 1 B U 52 1_555 B A 66 1_555 -0.023 -0.160 0.302 -3.530 -6.354 0.992 36 B_U50:A64_B B 50 ? B 64 ? 20 1 1 B G 53 1_555 B C 65 1_555 -0.145 -0.188 -0.312 -6.111 -8.911 0.813 37 B_G51:C63_B B 51 ? B 63 ? 19 1 1 B G 54 1_555 B C 64 1_555 -0.116 -0.195 -0.319 -8.120 -10.281 0.409 38 B_G52:C62_B B 52 ? B 62 ? 19 1 1 B G 55 1_555 B C 63 1_555 -0.163 -0.081 -0.111 -14.753 -5.817 1.403 39 B_G53:C61_B B 53 ? B 61 ? 19 1 1 B SUR 56 1_555 B 1MA 60 1_555 4.337 -1.746 0.753 -5.542 14.632 -105.645 40 B_SUR54:1MA58_B B 54 ? B 58 ? ? ? 1 B PSU 57 1_555 B G 19 1_555 0.595 -5.434 0.360 18.442 16.517 -100.387 41 B_PSU55:G18_B B 55 ? B 18 ? ? 2 1 B A 40 1_555 B OMC 34 1_555 -4.365 -0.584 0.673 10.410 14.723 3.527 42 B_A38:OMC32_B B 38 ? B 32 ? ? 1 1 B G 41 1_555 B C 33 1_555 -0.179 -0.143 0.140 7.741 0.613 0.641 43 B_G39:C31_B B 39 ? B 31 ? 19 1 1 B G 42 1_555 B C 32 1_555 -0.133 -0.157 0.082 1.840 -4.904 2.021 44 B_G40:C30_B B 40 ? B 30 ? 19 1 1 B C 43 1_555 B G 31 1_555 0.202 -0.065 -0.077 2.745 -7.437 4.026 45 B_C41:G29_B B 41 ? B 29 ? 19 1 1 B G 44 1_555 B C 30 1_555 -0.228 -0.088 -0.040 -0.863 -8.430 3.364 46 B_G42:C28_B B 42 ? B 28 ? 19 1 1 B G 45 1_555 B C 29 1_555 -0.162 -0.174 0.287 -3.935 -10.824 -0.151 47 B_G43:C27_B B 43 ? B 27 ? 19 1 1 B A 46 1_555 B M2G 28 1_555 0.085 1.716 -0.573 -31.588 -14.955 -17.804 48 B_A44:M2G26_B B 44 ? B 26 ? 8 1 1 B 2MG 10 1_555 B C 27 1_555 -0.146 -0.244 -0.136 -4.985 -10.496 0.261 49 B_2MG10:C25_B B 10 ? B 25 ? 19 1 1 B U 11 1_555 B A 26 1_555 0.023 -0.227 -0.134 -6.417 -9.049 1.119 50 B_U11:A24_B B 11 ? B 24 ? 20 1 1 B C 12 1_555 B G 25 1_555 0.295 -0.155 -0.002 0.409 -5.137 0.199 51 B_C12:G23_B B 12 ? B 23 ? 19 1 1 B PSU 13 1_555 B G 24 1_555 1.978 -0.388 -0.151 9.733 -9.065 3.105 52 B_PSU13:G22_B B 13 ? B 22 ? 27 1 1 B A 14 1_555 B 4SU 8 1_555 -4.154 -2.183 0.640 5.269 12.672 -94.019 53 B_A14:4SU8_B B 14 ? B 8 ? 24 4 1 B 7SN 15 1_555 B 5MC 50 1_555 0.020 3.511 -0.255 -10.136 -9.745 153.586 54 B_7SN15:5MC48_B B 15 ? B 48 ? 22 2 1 B C 16 1_555 B G 61 1_555 -3.837 -7.887 1.602 45.826 -11.508 -154.978 55 B_C16:G59_B B 16 ? B 59 ? ? ? 1 B G 20 1_555 B OMC 58 1_555 -0.218 0.021 0.239 -22.589 -15.919 0.947 56 B_G19:OMC56_B B 19 ? B 56 ? 19 1 1 B A 23 1_555 B G 48 1_555 -7.739 -4.505 0.029 34.032 39.395 -35.385 57 B_A21:G46_B B 21 ? B 46 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 74 1_555 A G 2 1_555 A C 73 1_555 -0.561 -2.021 3.249 0.099 4.685 31.378 -4.515 1.043 2.922 8.603 -0.181 31.718 1 AA_G1G2:C71C72_AA A 1 ? A 72 ? A 2 ? A 71 ? 1 A G 2 1_555 A C 73 1_555 A G 3 1_555 A C 72 1_555 0.136 -1.649 3.162 -0.644 5.540 32.231 -3.816 -0.345 2.843 9.886 1.150 32.698 2 AA_G2G3:C70C71_AA A 2 ? A 71 ? A 3 ? A 70 ? 1 A G 3 1_555 A C 72 1_555 A C 4 1_555 A G 71 1_555 0.523 -1.611 3.174 0.139 4.067 33.128 -3.441 -0.890 2.963 7.100 -0.242 33.370 3 AA_G3C4:G69C70_AA A 3 ? A 70 ? A 4 ? A 69 ? 1 A C 4 1_555 A G 71 1_555 A C 5 1_555 A G 70 1_555 0.346 -2.065 3.046 1.357 2.241 25.702 -5.185 -0.432 2.873 5.020 -3.041 25.833 4 AA_C4C5:G68G69_AA A 4 ? A 69 ? A 5 ? A 68 ? 1 A C 5 1_555 A G 70 1_555 A G 7 1_555 A C 68 1_555 -0.461 -3.647 6.440 -0.263 15.570 61.660 -4.740 0.417 5.475 14.937 0.252 63.408 5 AA_C5G7:C66G68_AA A 5 ? A 68 ? A 7 ? A 66 ? 1 A G 7 1_555 A C 68 1_555 A 5MC 51 1_555 A G 67 1_555 -0.652 -1.530 3.148 0.057 2.873 36.253 -2.829 1.052 3.021 4.608 -0.091 36.363 6 AA_G75MC49:G65C66_AA A 7 ? A 66 ? A 49 ? A 65 ? 1 A 5MC 51 1_555 A G 67 1_555 A U 52 1_555 A A 66 1_555 -0.128 -1.871 3.369 -2.556 4.338 32.248 -4.080 -0.213 3.098 7.751 4.567 32.628 7 AA_5MC49U50:A64G65_AA A 49 ? A 65 ? A 50 ? A 64 ? 1 A U 52 1_555 A A 66 1_555 A G 53 1_555 A C 65 1_555 -0.340 -1.564 3.145 1.020 8.192 30.194 -4.295 0.804 2.627 15.369 -1.914 31.277 8 AA_U50G51:C63A64_AA A 50 ? A 64 ? A 51 ? A 63 ? 1 A G 53 1_555 A C 65 1_555 A G 54 1_555 A C 64 1_555 0.488 -2.058 3.349 1.440 6.354 31.759 -4.771 -0.630 2.912 11.460 -2.597 32.403 9 AA_G51G52:C62C63_AA A 51 ? A 63 ? A 52 ? A 62 ? 1 A G 54 1_555 A C 64 1_555 A G 55 1_555 A C 63 1_555 0.698 -2.116 3.574 4.587 4.637 32.486 -4.543 -0.403 3.313 8.185 -8.097 33.117 10 AA_G52G53:C61C62_AA A 52 ? A 62 ? A 53 ? A 61 ? 1 A G 55 1_555 A C 63 1_555 A SUR 56 1_555 A 1MA 60 1_555 -2.341 -2.567 3.174 0.780 0.985 88.257 -1.863 1.697 3.134 0.707 -0.560 88.264 11 AA_G53SUR54:1MA58C61_AA A 53 ? A 61 ? A 54 ? A 58 ? 1 A SUR 56 1_555 A 1MA 60 1_555 A PSU 57 1_555 A G 19 1_555 1.963 -1.888 3.566 7.790 2.530 41.099 -2.940 -1.828 3.743 3.561 -10.965 41.873 12 AA_SUR54PSU55:G181MA58_AA A 54 ? A 58 ? A 55 ? A 18 ? 1 A A 40 1_555 A OMC 34 1_555 A G 41 1_555 A C 33 1_555 0.174 -1.115 3.274 -5.662 6.212 51.003 -1.692 -0.576 3.093 7.158 6.524 51.645 13 AA_A38G39:C31OMC32_AA A 38 ? A 32 ? A 39 ? A 31 ? 1 A G 41 1_555 A C 33 1_555 A G 42 1_555 A C 32 1_555 -0.172 -1.782 3.245 2.263 7.545 32.556 -4.253 0.646 2.756 13.219 -3.964 33.470 14 AA_G39G40:C30C31_AA A 39 ? A 31 ? A 40 ? A 30 ? 1 A G 42 1_555 A C 32 1_555 A C 43 1_555 A G 31 1_555 0.077 -1.725 3.317 -0.569 3.512 33.167 -3.582 -0.227 3.122 6.129 0.994 33.352 15 AA_G40C41:G29C30_AA A 40 ? A 30 ? A 41 ? A 29 ? 1 A C 43 1_555 A G 31 1_555 A G 44 1_555 A C 30 1_555 -0.060 -1.848 3.270 -0.089 8.352 29.112 -5.100 0.097 2.650 16.198 0.173 30.262 16 AA_C41G42:C28G29_AA A 41 ? A 29 ? A 42 ? A 28 ? 1 A G 44 1_555 A C 30 1_555 A G 45 1_555 A C 29 1_555 0.544 -1.655 3.208 2.594 5.578 32.933 -3.742 -0.540 2.930 9.733 -4.527 33.487 17 AA_G42G43:C27C28_AA A 42 ? A 28 ? A 43 ? A 27 ? 1 A G 45 1_555 A C 29 1_555 A A 46 1_555 A M2G 28 1_555 -0.433 -1.930 3.526 8.215 9.503 38.169 -3.898 1.567 2.836 14.074 -12.167 40.109 18 AA_G43A44:M2G26C27_AA A 43 ? A 27 ? A 44 ? A 26 ? 1 A A 46 1_555 A M2G 28 1_555 A 2MG 10 1_555 A C 27 1_555 -2.396 -3.174 3.236 16.663 7.043 50.940 -3.866 3.501 1.993 7.909 -18.711 53.854 19 AA_A442MG10:C25M2G26_AA A 44 ? A 26 ? A 10 ? A 25 ? 1 A 2MG 10 1_555 A C 27 1_555 A U 11 1_555 A A 26 1_555 -0.474 -1.500 3.227 -1.187 5.754 34.193 -3.357 0.622 2.957 9.697 2.001 34.680 20 AA_2MG10U11:A24C25_AA A 10 ? A 25 ? A 11 ? A 24 ? 1 A U 11 1_555 A A 26 1_555 A C 12 1_555 A G 25 1_555 -0.286 -1.234 3.108 2.398 6.190 34.352 -2.909 0.808 2.824 10.361 -4.013 34.969 21 AA_U11C12:G23A24_AA A 11 ? A 24 ? A 12 ? A 23 ? 1 A C 12 1_555 A G 25 1_555 A PSU 13 1_555 A G 24 1_555 1.561 -1.829 3.006 4.117 2.178 29.374 -3.989 -2.238 3.051 4.261 -8.054 29.733 22 AA_C12PSU13:G22G23_AA A 12 ? A 23 ? A 13 ? A 22 ? 1 A PSU 13 1_555 A G 24 1_555 A A 14 1_555 A 4SU 8 1_555 -1.114 -1.053 3.403 0.265 -1.518 63.310 -0.933 1.073 3.421 -1.446 -0.253 63.327 23 AA_PSU13A14:4SU8G22_AA A 13 ? A 22 ? A 14 ? A 8 ? 1 A A 14 1_555 A 4SU 8 1_555 A 7SN 15 1_555 A 5MC 50 1_555 2.176 -3.076 3.059 7.499 7.950 -69.415 2.408 2.146 3.131 -6.938 6.544 -70.164 24 AA_A147SN15:5MC484SU8_AA A 14 ? A 8 ? A 15 ? A 48 ? 1 A 7SN 15 1_555 A 5MC 50 1_555 A C 16 1_555 A G 61 1_555 -1.284 -1.327 3.314 -1.143 -12.039 -163.793 0.695 -0.651 3.292 6.080 -0.577 -163.883 25 AA_7SN15C16:G595MC48_AA A 15 ? A 48 ? A 16 ? A 59 ? 1 B G 1 1_555 B C 74 1_555 B G 2 1_555 B C 73 1_555 -0.803 -1.569 3.296 -0.233 4.955 31.024 -3.802 1.441 3.021 9.189 0.432 31.409 26 BB_G1G2:C71C72_BB B 1 ? B 72 ? B 2 ? B 71 ? 1 B G 2 1_555 B C 73 1_555 B G 3 1_555 B C 72 1_555 0.178 -1.773 3.154 -1.326 5.988 30.725 -4.316 -0.558 2.757 11.162 2.471 31.317 27 BB_G2G3:C70C71_BB B 2 ? B 71 ? B 3 ? B 70 ? 1 B G 3 1_555 B C 72 1_555 B C 4 1_555 B G 71 1_555 0.084 -1.454 3.118 -0.499 5.492 32.523 -3.417 -0.226 2.840 9.718 0.883 32.975 28 BB_G3C4:G69C70_BB B 3 ? B 70 ? B 4 ? B 69 ? 1 B C 4 1_555 B G 71 1_555 B C 5 1_555 B G 70 1_555 0.329 -1.976 3.125 0.188 4.729 30.162 -4.609 -0.590 2.792 9.017 -0.359 30.522 29 BB_C4C5:G68G69_BB B 4 ? B 69 ? B 5 ? B 68 ? 1 B C 5 1_555 B G 70 1_555 B G 7 1_555 B C 68 1_555 -0.451 -3.784 6.149 -1.414 17.818 62.042 -4.884 0.319 5.019 16.916 1.343 64.318 30 BB_C5G7:C66G68_BB B 5 ? B 68 ? B 7 ? B 66 ? 1 B G 7 1_555 B C 68 1_555 B 5MC 51 1_555 B G 67 1_555 -0.849 -1.377 3.128 0.813 3.834 36.497 -2.675 1.452 2.954 6.100 -1.294 36.700 31 BB_G75MC49:G65C66_BB B 7 ? B 66 ? B 49 ? B 65 ? 1 B 5MC 51 1_555 B G 67 1_555 B U 52 1_555 B A 66 1_555 -0.069 -1.839 3.288 -2.395 4.628 33.643 -3.857 -0.251 3.014 7.937 4.108 34.033 32 BB_5MC49U50:A64G65_BB B 49 ? B 65 ? B 50 ? B 64 ? 1 B U 52 1_555 B A 66 1_555 B G 53 1_555 B C 65 1_555 0.126 -1.611 3.221 5.626 9.727 30.667 -4.419 0.673 2.585 17.664 -10.216 32.614 33 BB_U50G51:C63A64_BB B 50 ? B 64 ? B 51 ? B 63 ? 1 B G 53 1_555 B C 65 1_555 B G 54 1_555 B C 64 1_555 0.098 -1.643 3.329 -0.180 6.912 30.845 -4.253 -0.212 2.901 12.794 0.334 31.593 34 BB_G51G52:C62C63_BB B 51 ? B 63 ? B 52 ? B 62 ? 1 B G 54 1_555 B C 64 1_555 B G 55 1_555 B C 63 1_555 0.682 -2.021 3.393 0.609 3.361 32.894 -4.123 -1.094 3.188 5.915 -1.072 33.066 35 BB_G52G53:C61C62_BB B 52 ? B 62 ? B 53 ? B 61 ? 1 B G 55 1_555 B C 63 1_555 B SUR 56 1_555 B 1MA 60 1_555 -2.242 -2.519 3.133 2.305 1.639 89.882 -1.814 1.631 3.051 1.160 -1.631 89.917 36 BB_G53SUR54:1MA58C61_BB B 53 ? B 61 ? B 54 ? B 58 ? 1 B SUR 56 1_555 B 1MA 60 1_555 B PSU 57 1_555 B G 19 1_555 2.108 -1.897 3.422 9.154 1.209 40.972 -2.789 -1.889 3.733 1.701 -12.881 41.956 37 BB_SUR54PSU55:G181MA58_BB B 54 ? B 58 ? B 55 ? B 18 ? 1 B A 40 1_555 B OMC 34 1_555 B G 41 1_555 B C 33 1_555 -0.216 -1.558 3.283 0.513 5.206 46.741 -2.373 0.312 3.100 6.537 -0.645 47.016 38 BB_A38G39:C31OMC32_BB B 38 ? B 32 ? B 39 ? B 31 ? 1 B G 41 1_555 B C 33 1_555 B G 42 1_555 B C 32 1_555 0.263 -1.976 3.338 1.358 6.438 32.048 -4.583 -0.240 2.905 11.509 -2.428 32.699 39 BB_G39G40:C30C31_BB B 39 ? B 31 ? B 40 ? B 30 ? 1 B G 42 1_555 B C 32 1_555 B C 43 1_555 B G 31 1_555 0.217 -1.389 3.229 2.924 3.393 34.344 -2.840 0.071 3.089 5.717 -4.925 34.626 40 BB_G40C41:G29C30_BB B 40 ? B 30 ? B 41 ? B 29 ? 1 B C 43 1_555 B G 31 1_555 B G 44 1_555 B C 30 1_555 0.322 -1.694 3.252 1.778 12.076 27.653 -5.451 -0.296 2.339 23.847 -3.512 30.179 41 BB_C41G42:C28G29_BB B 41 ? B 29 ? B 42 ? B 28 ? 1 B G 44 1_555 B C 30 1_555 B G 45 1_555 B C 29 1_555 0.614 -1.889 3.227 -1.204 4.973 30.226 -4.493 -1.384 2.861 9.451 2.289 30.646 42 BB_G42G43:C27C28_BB B 42 ? B 28 ? B 43 ? B 27 ? 1 B G 45 1_555 B C 29 1_555 B A 46 1_555 B M2G 28 1_555 -1.193 -2.474 3.597 8.054 12.883 39.054 -4.757 2.478 2.417 18.445 -11.531 41.798 43 BB_G43A44:M2G26C27_BB B 43 ? B 27 ? B 44 ? B 26 ? 1 B A 46 1_555 B M2G 28 1_555 B 2MG 10 1_555 B C 27 1_555 -1.843 -3.465 3.546 22.271 8.800 50.689 -4.168 3.138 2.049 9.685 -24.510 55.721 44 BB_A442MG10:C25M2G26_BB B 44 ? B 26 ? B 10 ? B 25 ? 1 B 2MG 10 1_555 B C 27 1_555 B U 11 1_555 B A 26 1_555 -0.775 -1.387 3.251 -1.076 7.730 35.125 -3.298 1.110 2.912 12.617 1.756 35.955 45 BB_2MG10U11:A24C25_BB B 10 ? B 25 ? B 11 ? B 24 ? 1 B U 11 1_555 B A 26 1_555 B C 12 1_555 B G 25 1_555 -0.062 -1.085 3.138 -0.047 4.146 32.736 -2.572 0.101 2.982 7.319 0.083 32.990 46 BB_U11C12:G23A24_BB B 11 ? B 24 ? B 12 ? B 23 ? 1 B C 12 1_555 B G 25 1_555 B PSU 13 1_555 B G 24 1_555 1.691 -1.752 2.972 2.835 3.844 26.651 -4.619 -2.968 2.857 8.255 -6.089 27.068 47 BB_C12PSU13:G22G23_BB B 12 ? B 23 ? B 13 ? B 22 ? 1 B PSU 13 1_555 B G 24 1_555 B A 14 1_555 B 4SU 8 1_555 -0.897 -1.068 3.319 1.808 -2.524 71.618 -0.826 0.828 3.330 -2.156 -1.545 71.677 48 BB_PSU13A14:4SU8G22_BB B 13 ? B 22 ? B 14 ? B 8 ? 1 B A 14 1_555 B 4SU 8 1_555 B 7SN 15 1_555 B 5MC 50 1_555 1.904 -3.266 3.626 9.276 13.038 -71.893 2.247 1.938 3.855 -10.972 7.806 -73.417 49 BB_A147SN15:5MC484SU8_BB B 14 ? B 8 ? B 15 ? B 48 ? 1 B 7SN 15 1_555 B 5MC 50 1_555 B C 16 1_555 B G 61 1_555 -1.235 -1.170 2.963 2.132 -13.486 -159.143 0.627 -0.623 2.941 6.855 1.084 -159.292 50 BB_7SN15C16:G595MC48_BB B 15 ? B 48 ? B 16 ? B 59 ? # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science (JSPS)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number 18H03980 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 9QV _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 9QV _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1IVS _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #