data_7VNX # _entry.id 7VNX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7VNX pdb_00007vnx 10.2210/pdb7vnx/pdb WWPDB D_1300017325 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-05-04 2 'Structure model' 1 1 2022-05-11 3 'Structure model' 1 2 2022-05-25 4 'Structure model' 1 3 2024-05-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 3 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7VNX _pdbx_database_status.recvd_initial_deposition_date 2021-10-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yamashita, S.' 1 ? 'Minowa, K.' 2 ? 'Ohira, T.' 3 ? 'Suzuki, T.' 4 ? 'Tomita, K.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 605 _citation.language ? _citation.page_first 372 _citation.page_last 379 _citation.title 'Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41586-022-04677-2 _citation.pdbx_database_id_PubMed 35477761 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ohira, T.' 1 0000-0002-1487-1312 primary 'Minowa, K.' 2 ? primary 'Sugiyama, K.' 3 ? primary 'Yamashita, S.' 4 0000-0002-6970-8758 primary 'Sakaguchi, Y.' 5 ? primary 'Miyauchi, K.' 6 0000-0002-4075-7660 primary 'Noguchi, R.' 7 ? primary 'Kaneko, A.' 8 ? primary 'Orita, I.' 9 ? primary 'Fukui, T.' 10 ? primary 'Tomita, K.' 11 0000-0002-7374-3898 primary 'Suzuki, T.' 12 0000-0002-9731-1731 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man TkArkI 24996.865 1 ? ? ? ? 2 non-polymer syn GUANOSINE 283.241 1 ? ? ? ? 3 water nat water 18.015 77 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ENLYFQGMTFEHIISSKRLEGFLRHLAEEGVGGVEPLAKGTTSLVFTGVLGGRKVVIKLQRPDSPRSNFEKEAELTKIAS TFGVTPPIIGLGEFEGLPYLIREFAEGEPILFADVEKEHLFRIVEKTALLDRLGIDHGQIQGGKHIIIGEDVYLIDFEKA GFRKPNNLTSAMAMIFIGENAISKRVREKFGLDEKFREEMKDALRHYKRTGSLSRLLSLLSGL ; _entity_poly.pdbx_seq_one_letter_code_can ;ENLYFQGMTFEHIISSKRLEGFLRHLAEEGVGGVEPLAKGTTSLVFTGVLGGRKVVIKLQRPDSPRSNFEKEAELTKIAS TFGVTPPIIGLGEFEGLPYLIREFAEGEPILFADVEKEHLFRIVEKTALLDRLGIDHGQIQGGKHIIIGEDVYLIDFEKA GFRKPNNLTSAMAMIFIGENAISKRVREKFGLDEKFREEMKDALRHYKRTGSLSRLLSLLSGL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GUANOSINE GMP 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 ASN n 1 3 LEU n 1 4 TYR n 1 5 PHE n 1 6 GLN n 1 7 GLY n 1 8 MET n 1 9 THR n 1 10 PHE n 1 11 GLU n 1 12 HIS n 1 13 ILE n 1 14 ILE n 1 15 SER n 1 16 SER n 1 17 LYS n 1 18 ARG n 1 19 LEU n 1 20 GLU n 1 21 GLY n 1 22 PHE n 1 23 LEU n 1 24 ARG n 1 25 HIS n 1 26 LEU n 1 27 ALA n 1 28 GLU n 1 29 GLU n 1 30 GLY n 1 31 VAL n 1 32 GLY n 1 33 GLY n 1 34 VAL n 1 35 GLU n 1 36 PRO n 1 37 LEU n 1 38 ALA n 1 39 LYS n 1 40 GLY n 1 41 THR n 1 42 THR n 1 43 SER n 1 44 LEU n 1 45 VAL n 1 46 PHE n 1 47 THR n 1 48 GLY n 1 49 VAL n 1 50 LEU n 1 51 GLY n 1 52 GLY n 1 53 ARG n 1 54 LYS n 1 55 VAL n 1 56 VAL n 1 57 ILE n 1 58 LYS n 1 59 LEU n 1 60 GLN n 1 61 ARG n 1 62 PRO n 1 63 ASP n 1 64 SER n 1 65 PRO n 1 66 ARG n 1 67 SER n 1 68 ASN n 1 69 PHE n 1 70 GLU n 1 71 LYS n 1 72 GLU n 1 73 ALA n 1 74 GLU n 1 75 LEU n 1 76 THR n 1 77 LYS n 1 78 ILE n 1 79 ALA n 1 80 SER n 1 81 THR n 1 82 PHE n 1 83 GLY n 1 84 VAL n 1 85 THR n 1 86 PRO n 1 87 PRO n 1 88 ILE n 1 89 ILE n 1 90 GLY n 1 91 LEU n 1 92 GLY n 1 93 GLU n 1 94 PHE n 1 95 GLU n 1 96 GLY n 1 97 LEU n 1 98 PRO n 1 99 TYR n 1 100 LEU n 1 101 ILE n 1 102 ARG n 1 103 GLU n 1 104 PHE n 1 105 ALA n 1 106 GLU n 1 107 GLY n 1 108 GLU n 1 109 PRO n 1 110 ILE n 1 111 LEU n 1 112 PHE n 1 113 ALA n 1 114 ASP n 1 115 VAL n 1 116 GLU n 1 117 LYS n 1 118 GLU n 1 119 HIS n 1 120 LEU n 1 121 PHE n 1 122 ARG n 1 123 ILE n 1 124 VAL n 1 125 GLU n 1 126 LYS n 1 127 THR n 1 128 ALA n 1 129 LEU n 1 130 LEU n 1 131 ASP n 1 132 ARG n 1 133 LEU n 1 134 GLY n 1 135 ILE n 1 136 ASP n 1 137 HIS n 1 138 GLY n 1 139 GLN n 1 140 ILE n 1 141 GLN n 1 142 GLY n 1 143 GLY n 1 144 LYS n 1 145 HIS n 1 146 ILE n 1 147 ILE n 1 148 ILE n 1 149 GLY n 1 150 GLU n 1 151 ASP n 1 152 VAL n 1 153 TYR n 1 154 LEU n 1 155 ILE n 1 156 ASP n 1 157 PHE n 1 158 GLU n 1 159 LYS n 1 160 ALA n 1 161 GLY n 1 162 PHE n 1 163 ARG n 1 164 LYS n 1 165 PRO n 1 166 ASN n 1 167 ASN n 1 168 LEU n 1 169 THR n 1 170 SER n 1 171 ALA n 1 172 MET n 1 173 ALA n 1 174 MET n 1 175 ILE n 1 176 PHE n 1 177 ILE n 1 178 GLY n 1 179 GLU n 1 180 ASN n 1 181 ALA n 1 182 ILE n 1 183 SER n 1 184 LYS n 1 185 ARG n 1 186 VAL n 1 187 ARG n 1 188 GLU n 1 189 LYS n 1 190 PHE n 1 191 GLY n 1 192 LEU n 1 193 ASP n 1 194 GLU n 1 195 LYS n 1 196 PHE n 1 197 ARG n 1 198 GLU n 1 199 GLU n 1 200 MET n 1 201 LYS n 1 202 ASP n 1 203 ALA n 1 204 LEU n 1 205 ARG n 1 206 HIS n 1 207 TYR n 1 208 LYS n 1 209 ARG n 1 210 THR n 1 211 GLY n 1 212 SER n 1 213 LEU n 1 214 SER n 1 215 ARG n 1 216 LEU n 1 217 LEU n 1 218 SER n 1 219 LEU n 1 220 LEU n 1 221 SER n 1 222 GLY n 1 223 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 223 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermococcus kodakarensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 311400 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GMP non-polymer . GUANOSINE ? 'C10 H13 N5 O5' 283.241 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 -6 ? ? ? A . n A 1 2 ASN 2 -5 ? ? ? A . n A 1 3 LEU 3 -4 ? ? ? A . n A 1 4 TYR 4 -3 ? ? ? A . n A 1 5 PHE 5 -2 ? ? ? A . n A 1 6 GLN 6 -1 ? ? ? A . n A 1 7 GLY 7 0 ? ? ? A . n A 1 8 MET 8 1 1 MET MET A . n A 1 9 THR 9 2 2 THR THR A . n A 1 10 PHE 10 3 3 PHE PHE A . n A 1 11 GLU 11 4 4 GLU GLU A . n A 1 12 HIS 12 5 5 HIS HIS A . n A 1 13 ILE 13 6 6 ILE ILE A . n A 1 14 ILE 14 7 7 ILE ILE A . n A 1 15 SER 15 8 8 SER SER A . n A 1 16 SER 16 9 9 SER SER A . n A 1 17 LYS 17 10 10 LYS LYS A . n A 1 18 ARG 18 11 11 ARG ARG A . n A 1 19 LEU 19 12 12 LEU LEU A . n A 1 20 GLU 20 13 13 GLU GLU A . n A 1 21 GLY 21 14 14 GLY GLY A . n A 1 22 PHE 22 15 15 PHE PHE A . n A 1 23 LEU 23 16 16 LEU LEU A . n A 1 24 ARG 24 17 17 ARG ARG A . n A 1 25 HIS 25 18 18 HIS HIS A . n A 1 26 LEU 26 19 19 LEU LEU A . n A 1 27 ALA 27 20 20 ALA ALA A . n A 1 28 GLU 28 21 21 GLU GLU A . n A 1 29 GLU 29 22 22 GLU GLU A . n A 1 30 GLY 30 23 23 GLY GLY A . n A 1 31 VAL 31 24 24 VAL VAL A . n A 1 32 GLY 32 25 25 GLY GLY A . n A 1 33 GLY 33 26 26 GLY GLY A . n A 1 34 VAL 34 27 27 VAL VAL A . n A 1 35 GLU 35 28 28 GLU GLU A . n A 1 36 PRO 36 29 29 PRO PRO A . n A 1 37 LEU 37 30 30 LEU LEU A . n A 1 38 ALA 38 31 31 ALA ALA A . n A 1 39 LYS 39 32 32 LYS LYS A . n A 1 40 GLY 40 33 33 GLY GLY A . n A 1 41 THR 41 34 34 THR THR A . n A 1 42 THR 42 35 35 THR THR A . n A 1 43 SER 43 36 36 SER SER A . n A 1 44 LEU 44 37 37 LEU LEU A . n A 1 45 VAL 45 38 38 VAL VAL A . n A 1 46 PHE 46 39 39 PHE PHE A . n A 1 47 THR 47 40 40 THR THR A . n A 1 48 GLY 48 41 41 GLY GLY A . n A 1 49 VAL 49 42 42 VAL VAL A . n A 1 50 LEU 50 43 43 LEU LEU A . n A 1 51 GLY 51 44 44 GLY GLY A . n A 1 52 GLY 52 45 45 GLY GLY A . n A 1 53 ARG 53 46 46 ARG ARG A . n A 1 54 LYS 54 47 47 LYS LYS A . n A 1 55 VAL 55 48 48 VAL VAL A . n A 1 56 VAL 56 49 49 VAL VAL A . n A 1 57 ILE 57 50 50 ILE ILE A . n A 1 58 LYS 58 51 51 LYS LYS A . n A 1 59 LEU 59 52 52 LEU LEU A . n A 1 60 GLN 60 53 53 GLN GLN A . n A 1 61 ARG 61 54 54 ARG ARG A . n A 1 62 PRO 62 55 55 PRO PRO A . n A 1 63 ASP 63 56 56 ASP ASP A . n A 1 64 SER 64 57 57 SER SER A . n A 1 65 PRO 65 58 58 PRO PRO A . n A 1 66 ARG 66 59 59 ARG ARG A . n A 1 67 SER 67 60 60 SER SER A . n A 1 68 ASN 68 61 61 ASN ASN A . n A 1 69 PHE 69 62 62 PHE PHE A . n A 1 70 GLU 70 63 63 GLU GLU A . n A 1 71 LYS 71 64 64 LYS LYS A . n A 1 72 GLU 72 65 65 GLU GLU A . n A 1 73 ALA 73 66 66 ALA ALA A . n A 1 74 GLU 74 67 67 GLU GLU A . n A 1 75 LEU 75 68 68 LEU LEU A . n A 1 76 THR 76 69 69 THR THR A . n A 1 77 LYS 77 70 70 LYS LYS A . n A 1 78 ILE 78 71 71 ILE ILE A . n A 1 79 ALA 79 72 72 ALA ALA A . n A 1 80 SER 80 73 73 SER SER A . n A 1 81 THR 81 74 74 THR THR A . n A 1 82 PHE 82 75 75 PHE PHE A . n A 1 83 GLY 83 76 76 GLY GLY A . n A 1 84 VAL 84 77 77 VAL VAL A . n A 1 85 THR 85 78 78 THR THR A . n A 1 86 PRO 86 79 79 PRO PRO A . n A 1 87 PRO 87 80 80 PRO PRO A . n A 1 88 ILE 88 81 81 ILE ILE A . n A 1 89 ILE 89 82 82 ILE ILE A . n A 1 90 GLY 90 83 83 GLY GLY A . n A 1 91 LEU 91 84 84 LEU LEU A . n A 1 92 GLY 92 85 85 GLY GLY A . n A 1 93 GLU 93 86 86 GLU GLU A . n A 1 94 PHE 94 87 87 PHE PHE A . n A 1 95 GLU 95 88 88 GLU GLU A . n A 1 96 GLY 96 89 89 GLY GLY A . n A 1 97 LEU 97 90 90 LEU LEU A . n A 1 98 PRO 98 91 91 PRO PRO A . n A 1 99 TYR 99 92 92 TYR TYR A . n A 1 100 LEU 100 93 93 LEU LEU A . n A 1 101 ILE 101 94 94 ILE ILE A . n A 1 102 ARG 102 95 95 ARG ARG A . n A 1 103 GLU 103 96 96 GLU GLU A . n A 1 104 PHE 104 97 97 PHE PHE A . n A 1 105 ALA 105 98 98 ALA ALA A . n A 1 106 GLU 106 99 99 GLU GLU A . n A 1 107 GLY 107 100 100 GLY GLY A . n A 1 108 GLU 108 101 101 GLU GLU A . n A 1 109 PRO 109 102 102 PRO PRO A . n A 1 110 ILE 110 103 103 ILE ILE A . n A 1 111 LEU 111 104 104 LEU LEU A . n A 1 112 PHE 112 105 105 PHE PHE A . n A 1 113 ALA 113 106 106 ALA ALA A . n A 1 114 ASP 114 107 107 ASP ASP A . n A 1 115 VAL 115 108 108 VAL VAL A . n A 1 116 GLU 116 109 109 GLU GLU A . n A 1 117 LYS 117 110 110 LYS LYS A . n A 1 118 GLU 118 111 111 GLU GLU A . n A 1 119 HIS 119 112 112 HIS HIS A . n A 1 120 LEU 120 113 113 LEU LEU A . n A 1 121 PHE 121 114 114 PHE PHE A . n A 1 122 ARG 122 115 115 ARG ARG A . n A 1 123 ILE 123 116 116 ILE ILE A . n A 1 124 VAL 124 117 117 VAL VAL A . n A 1 125 GLU 125 118 118 GLU GLU A . n A 1 126 LYS 126 119 119 LYS LYS A . n A 1 127 THR 127 120 120 THR THR A . n A 1 128 ALA 128 121 121 ALA ALA A . n A 1 129 LEU 129 122 122 LEU LEU A . n A 1 130 LEU 130 123 123 LEU LEU A . n A 1 131 ASP 131 124 124 ASP ASP A . n A 1 132 ARG 132 125 125 ARG ARG A . n A 1 133 LEU 133 126 126 LEU LEU A . n A 1 134 GLY 134 127 127 GLY GLY A . n A 1 135 ILE 135 128 128 ILE ILE A . n A 1 136 ASP 136 129 129 ASP ASP A . n A 1 137 HIS 137 130 130 HIS HIS A . n A 1 138 GLY 138 131 131 GLY GLY A . n A 1 139 GLN 139 132 132 GLN GLN A . n A 1 140 ILE 140 133 133 ILE ILE A . n A 1 141 GLN 141 134 134 GLN GLN A . n A 1 142 GLY 142 135 135 GLY GLY A . n A 1 143 GLY 143 136 136 GLY GLY A . n A 1 144 LYS 144 137 137 LYS LYS A . n A 1 145 HIS 145 138 138 HIS HIS A . n A 1 146 ILE 146 139 139 ILE ILE A . n A 1 147 ILE 147 140 140 ILE ILE A . n A 1 148 ILE 148 141 141 ILE ILE A . n A 1 149 GLY 149 142 142 GLY GLY A . n A 1 150 GLU 150 143 143 GLU GLU A . n A 1 151 ASP 151 144 144 ASP ASP A . n A 1 152 VAL 152 145 145 VAL VAL A . n A 1 153 TYR 153 146 146 TYR TYR A . n A 1 154 LEU 154 147 147 LEU LEU A . n A 1 155 ILE 155 148 148 ILE ILE A . n A 1 156 ASP 156 149 149 ASP ASP A . n A 1 157 PHE 157 150 150 PHE PHE A . n A 1 158 GLU 158 151 151 GLU GLU A . n A 1 159 LYS 159 152 152 LYS LYS A . n A 1 160 ALA 160 153 153 ALA ALA A . n A 1 161 GLY 161 154 154 GLY GLY A . n A 1 162 PHE 162 155 155 PHE PHE A . n A 1 163 ARG 163 156 156 ARG ARG A . n A 1 164 LYS 164 157 157 LYS LYS A . n A 1 165 PRO 165 158 158 PRO PRO A . n A 1 166 ASN 166 159 159 ASN ASN A . n A 1 167 ASN 167 160 160 ASN ASN A . n A 1 168 LEU 168 161 161 LEU LEU A . n A 1 169 THR 169 162 162 THR THR A . n A 1 170 SER 170 163 163 SER SER A . n A 1 171 ALA 171 164 164 ALA ALA A . n A 1 172 MET 172 165 165 MET MET A . n A 1 173 ALA 173 166 166 ALA ALA A . n A 1 174 MET 174 167 167 MET MET A . n A 1 175 ILE 175 168 168 ILE ILE A . n A 1 176 PHE 176 169 169 PHE PHE A . n A 1 177 ILE 177 170 170 ILE ILE A . n A 1 178 GLY 178 171 171 GLY GLY A . n A 1 179 GLU 179 172 172 GLU GLU A . n A 1 180 ASN 180 173 173 ASN ASN A . n A 1 181 ALA 181 174 174 ALA ALA A . n A 1 182 ILE 182 175 175 ILE ILE A . n A 1 183 SER 183 176 176 SER SER A . n A 1 184 LYS 184 177 177 LYS LYS A . n A 1 185 ARG 185 178 178 ARG ARG A . n A 1 186 VAL 186 179 179 VAL VAL A . n A 1 187 ARG 187 180 180 ARG ARG A . n A 1 188 GLU 188 181 181 GLU GLU A . n A 1 189 LYS 189 182 182 LYS LYS A . n A 1 190 PHE 190 183 183 PHE PHE A . n A 1 191 GLY 191 184 184 GLY GLY A . n A 1 192 LEU 192 185 185 LEU LEU A . n A 1 193 ASP 193 186 186 ASP ASP A . n A 1 194 GLU 194 187 187 GLU GLU A . n A 1 195 LYS 195 188 188 LYS LYS A . n A 1 196 PHE 196 189 189 PHE PHE A . n A 1 197 ARG 197 190 190 ARG ARG A . n A 1 198 GLU 198 191 191 GLU GLU A . n A 1 199 GLU 199 192 192 GLU GLU A . n A 1 200 MET 200 193 193 MET MET A . n A 1 201 LYS 201 194 194 LYS LYS A . n A 1 202 ASP 202 195 195 ASP ASP A . n A 1 203 ALA 203 196 196 ALA ALA A . n A 1 204 LEU 204 197 197 LEU LEU A . n A 1 205 ARG 205 198 198 ARG ARG A . n A 1 206 HIS 206 199 199 HIS HIS A . n A 1 207 TYR 207 200 200 TYR TYR A . n A 1 208 LYS 208 201 201 LYS LYS A . n A 1 209 ARG 209 202 202 ARG ARG A . n A 1 210 THR 210 203 203 THR THR A . n A 1 211 GLY 211 204 204 GLY GLY A . n A 1 212 SER 212 205 205 SER SER A . n A 1 213 LEU 213 206 206 LEU LEU A . n A 1 214 SER 214 207 207 SER SER A . n A 1 215 ARG 215 208 208 ARG ARG A . n A 1 216 LEU 216 209 209 LEU LEU A . n A 1 217 LEU 217 210 210 LEU LEU A . n A 1 218 SER 218 211 211 SER SER A . n A 1 219 LEU 219 212 212 LEU LEU A . n A 1 220 LEU 220 213 213 LEU LEU A . n A 1 221 SER 221 214 214 SER SER A . n A 1 222 GLY 222 215 215 GLY GLY A . n A 1 223 LEU 223 216 216 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GMP 1 1001 1001 GMP GMP A . C 3 HOH 1 1101 2077 HOH HOH A . C 3 HOH 2 1102 2022 HOH HOH A . C 3 HOH 3 1103 2062 HOH HOH A . C 3 HOH 4 1104 2045 HOH HOH A . C 3 HOH 5 1105 2083 HOH HOH A . C 3 HOH 6 1106 2059 HOH HOH A . C 3 HOH 7 1107 2018 HOH HOH A . C 3 HOH 8 1108 2017 HOH HOH A . C 3 HOH 9 1109 2014 HOH HOH A . C 3 HOH 10 1110 2054 HOH HOH A . C 3 HOH 11 1111 2010 HOH HOH A . C 3 HOH 12 1112 2082 HOH HOH A . C 3 HOH 13 1113 2030 HOH HOH A . C 3 HOH 14 1114 2060 HOH HOH A . C 3 HOH 15 1115 2013 HOH HOH A . C 3 HOH 16 1116 2075 HOH HOH A . C 3 HOH 17 1117 2024 HOH HOH A . C 3 HOH 18 1118 2002 HOH HOH A . C 3 HOH 19 1119 2039 HOH HOH A . C 3 HOH 20 1120 2004 HOH HOH A . C 3 HOH 21 1121 2008 HOH HOH A . C 3 HOH 22 1122 2052 HOH HOH A . C 3 HOH 23 1123 2065 HOH HOH A . C 3 HOH 24 1124 2021 HOH HOH A . C 3 HOH 25 1125 2015 HOH HOH A . C 3 HOH 26 1126 2012 HOH HOH A . C 3 HOH 27 1127 2001 HOH HOH A . C 3 HOH 28 1128 2011 HOH HOH A . C 3 HOH 29 1129 2003 HOH HOH A . C 3 HOH 30 1130 2031 HOH HOH A . C 3 HOH 31 1131 2035 HOH HOH A . C 3 HOH 32 1132 2006 HOH HOH A . C 3 HOH 33 1133 2056 HOH HOH A . C 3 HOH 34 1134 2057 HOH HOH A . C 3 HOH 35 1135 2074 HOH HOH A . C 3 HOH 36 1136 2067 HOH HOH A . C 3 HOH 37 1137 2007 HOH HOH A . C 3 HOH 38 1138 2044 HOH HOH A . C 3 HOH 39 1139 2033 HOH HOH A . C 3 HOH 40 1140 2016 HOH HOH A . C 3 HOH 41 1141 2019 HOH HOH A . C 3 HOH 42 1142 2027 HOH HOH A . C 3 HOH 43 1143 2066 HOH HOH A . C 3 HOH 44 1144 2037 HOH HOH A . C 3 HOH 45 1145 2009 HOH HOH A . C 3 HOH 46 1146 2036 HOH HOH A . C 3 HOH 47 1147 2048 HOH HOH A . C 3 HOH 48 1148 2049 HOH HOH A . C 3 HOH 49 1149 2061 HOH HOH A . C 3 HOH 50 1150 2025 HOH HOH A . C 3 HOH 51 1151 2051 HOH HOH A . C 3 HOH 52 1152 2023 HOH HOH A . C 3 HOH 53 1153 2032 HOH HOH A . C 3 HOH 54 1154 2005 HOH HOH A . C 3 HOH 55 1155 2042 HOH HOH A . C 3 HOH 56 1156 2026 HOH HOH A . C 3 HOH 57 1157 2079 HOH HOH A . C 3 HOH 58 1158 2038 HOH HOH A . C 3 HOH 59 1159 2078 HOH HOH A . C 3 HOH 60 1160 2069 HOH HOH A . C 3 HOH 61 1161 2080 HOH HOH A . C 3 HOH 62 1162 2068 HOH HOH A . C 3 HOH 63 1163 2041 HOH HOH A . C 3 HOH 64 1164 2058 HOH HOH A . C 3 HOH 65 1165 2029 HOH HOH A . C 3 HOH 66 1166 2073 HOH HOH A . C 3 HOH 67 1167 2081 HOH HOH A . C 3 HOH 68 1168 2076 HOH HOH A . C 3 HOH 69 1169 2070 HOH HOH A . C 3 HOH 70 1170 2072 HOH HOH A . C 3 HOH 71 1171 2071 HOH HOH A . C 3 HOH 72 1172 2020 HOH HOH A . C 3 HOH 73 1173 2047 HOH HOH A . C 3 HOH 74 1174 2050 HOH HOH A . C 3 HOH 75 1175 2053 HOH HOH A . C 3 HOH 76 1176 2046 HOH HOH A . C 3 HOH 77 1177 2063 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.12-2829_1309 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7VNX _cell.details ? _cell.formula_units_Z ? _cell.length_a 66.850 _cell.length_a_esd ? _cell.length_b 66.850 _cell.length_b_esd ? _cell.length_c 98.280 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VNX _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7VNX _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.50 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% ethylene glycol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-02-23 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate 34.360 _reflns.entry_id 7VNX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 37.464 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23021 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 39.595 _reflns.pdbx_Rmerge_I_obs 0.069 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 35.180 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.870 _reflns.pdbx_scaling_rejects 39 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.070 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 911513 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.800 1.850 ? 2.550 ? 67622 1687 ? 1683 99.800 ? ? ? ? 1.935 ? ? ? ? ? ? ? ? 40.179 ? ? ? ? 1.959 ? ? 1 1 0.857 ? ? ? ? ? ? ? ? ? ? 1.850 1.900 ? 3.730 ? 69110 1670 ? 1670 100.000 ? ? ? ? 1.398 ? ? ? ? ? ? ? ? 41.383 ? ? ? ? 1.416 ? ? 2 1 0.929 ? ? ? ? ? ? ? ? ? ? 1.900 1.950 ? 5.100 ? 65246 1594 ? 1594 100.000 ? ? ? ? 1.031 ? ? ? ? ? ? ? ? 40.932 ? ? ? ? 1.044 ? ? 3 1 0.961 ? ? ? ? ? ? ? ? ? ? 1.950 2.010 ? 7.030 ? 62317 1569 ? 1569 100.000 ? ? ? ? 0.735 ? ? ? ? ? ? ? ? 39.718 ? ? ? ? 0.744 ? ? 4 1 0.974 ? ? ? ? ? ? ? ? ? ? 2.010 2.080 ? 9.500 ? 60015 1532 ? 1532 100.000 ? ? ? ? 0.534 ? ? ? ? ? ? ? ? 39.174 ? ? ? ? 0.541 ? ? 5 1 0.988 ? ? ? ? ? ? ? ? ? ? 2.080 2.150 ? 12.630 ? 60146 1462 ? 1461 99.900 ? ? ? ? 0.411 ? ? ? ? ? ? ? ? 41.168 ? ? ? ? 0.416 ? ? 6 1 0.991 ? ? ? ? ? ? ? ? ? ? 2.150 2.230 ? 17.850 ? 59297 1414 ? 1414 100.000 ? ? ? ? 0.288 ? ? ? ? ? ? ? ? 41.936 ? ? ? ? 0.291 ? ? 7 1 0.997 ? ? ? ? ? ? ? ? ? ? 2.230 2.330 ? 22.440 ? 56161 1361 ? 1361 100.000 ? ? ? ? 0.226 ? ? ? ? ? ? ? ? 41.265 ? ? ? ? 0.229 ? ? 8 1 0.997 ? ? ? ? ? ? ? ? ? ? 2.330 2.430 ? 25.750 ? 51100 1292 ? 1292 100.000 ? ? ? ? 0.193 ? ? ? ? ? ? ? ? 39.551 ? ? ? ? 0.196 ? ? 9 1 0.998 ? ? ? ? ? ? ? ? ? ? 2.430 2.550 ? 31.350 ? 49175 1252 ? 1252 100.000 ? ? ? ? 0.151 ? ? ? ? ? ? ? ? 39.277 ? ? ? ? 0.152 ? ? 10 1 0.999 ? ? ? ? ? ? ? ? ? ? 2.550 2.690 ? 39.020 ? 49776 1198 ? 1198 100.000 ? ? ? ? 0.125 ? ? ? ? ? ? ? ? 41.549 ? ? ? ? 0.127 ? ? 11 1 0.999 ? ? ? ? ? ? ? ? ? ? 2.690 2.850 ? 48.500 ? 46131 1122 ? 1122 100.000 ? ? ? ? 0.099 ? ? ? ? ? ? ? ? 41.115 ? ? ? ? 0.100 ? ? 12 1 0.999 ? ? ? ? ? ? ? ? ? ? 2.850 3.040 ? 62.240 ? 41846 1068 ? 1068 100.000 ? ? ? ? 0.072 ? ? ? ? ? ? ? ? 39.182 ? ? ? ? 0.073 ? ? 13 1 1.000 ? ? ? ? ? ? ? ? ? ? 3.040 3.290 ? 71.950 ? 35697 976 ? 976 100.000 ? ? ? ? 0.059 ? ? ? ? ? ? ? ? 36.575 ? ? ? ? 0.060 ? ? 14 1 1.000 ? ? ? ? ? ? ? ? ? ? 3.290 3.600 ? 88.340 ? 33903 917 ? 917 100.000 ? ? ? ? 0.046 ? ? ? ? ? ? ? ? 36.972 ? ? ? ? 0.047 ? ? 15 1 1.000 ? ? ? ? ? ? ? ? ? ? 3.600 4.030 ? 98.910 ? 30302 814 ? 814 100.000 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 37.226 ? ? ? ? 0.042 ? ? 16 1 1.000 ? ? ? ? ? ? ? ? ? ? 4.030 4.650 ? 102.540 ? 25377 737 ? 737 100.000 ? ? ? ? 0.038 ? ? ? ? ? ? ? ? 34.433 ? ? ? ? 0.038 ? ? 17 1 1.000 ? ? ? ? ? ? ? ? ? ? 4.650 5.700 ? 103.460 ? 21782 613 ? 613 100.000 ? ? ? ? 0.036 ? ? ? ? ? ? ? ? 35.533 ? ? ? ? 0.036 ? ? 18 1 1.000 ? ? ? ? ? ? ? ? ? ? 5.700 8.060 ? 105.090 ? 17157 481 ? 481 100.000 ? ? ? ? 0.034 ? ? ? ? ? ? ? ? 35.669 ? ? ? ? 0.034 ? ? 19 1 1.000 ? ? ? ? ? ? ? ? ? ? 8.060 37.464 ? 112.590 ? 9353 269 ? 267 99.300 ? ? ? ? 0.029 ? ? ? ? ? ? ? ? 35.030 ? ? ? ? 0.029 ? ? 20 1 1.000 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 111.270 _refine.B_iso_mean 42.5358 _refine.B_iso_min 24.040 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7VNX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8010 _refine.ls_d_res_low 37.4640 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 23014 _refine.ls_number_reflns_R_free 1151 _refine.ls_number_reflns_R_work 21863 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9500 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1727 _refine.ls_R_factor_R_free 0.2050 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1711 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.360 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.6200 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1700 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.8010 _refine_hist.d_res_low 37.4640 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 1798 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 216 _refine_hist.pdbx_B_iso_mean_ligand 53.32 _refine_hist.pdbx_B_iso_mean_solvent 47.48 _refine_hist.pdbx_number_atoms_protein 1701 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 ? 1753 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.123 ? 2355 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.077 ? 262 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 301 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 19.989 ? 670 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.8012 1.8832 . . 142 2698 100.0000 . . . 0.2902 0.0000 0.2301 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8832 1.9824 . . 144 2737 100.0000 . . . 0.2623 0.0000 0.1971 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9824 2.1066 . . 143 2731 100.0000 . . . 0.2392 0.0000 0.1788 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1066 2.2693 . . 144 2722 100.0000 . . . 0.1823 0.0000 0.1630 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2693 2.4976 . . 143 2724 100.0000 . . . 0.2128 0.0000 0.1738 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4976 2.8589 . . 144 2732 100.0000 . . . 0.2478 0.0000 0.1876 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8589 3.6014 . . 145 2755 100.0000 . . . 0.2031 0.0000 0.1778 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6014 37.4640 . . 146 2764 100.0000 . . . 0.1810 0.0000 0.1565 . . . . . . . . . . . # _struct.entry_id 7VNX _struct.title 'Crystal structure of TkArkI' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7VNX _struct_keywords.text 'Kinase, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5JDQ4_THEKO _struct_ref.pdbx_db_accession Q5JDQ4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTFEHIISSKRLEGFLRHLAEEGVGGVEPLAKGTTSLVFTGVLGGRKVVIKLQRPDSPRSNFEKEAELTKIASTFGVTPP IIGLGEFEGLPYLIREFAEGEPILFADVEKEHLFRIVEKTALLDRLGIDHGQIQGGKHIIIGEDVYLIDFEKAGFRKPNN LTSAMAMIFIGENAISKRVREKFGLDEKFREEMKDALRHYKRTGSLSRLLSLLSGL ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7VNX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 223 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5JDQ4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 216 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 216 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7VNX GLU A 1 ? UNP Q5JDQ4 ? ? 'expression tag' -6 1 1 7VNX ASN A 2 ? UNP Q5JDQ4 ? ? 'expression tag' -5 2 1 7VNX LEU A 3 ? UNP Q5JDQ4 ? ? 'expression tag' -4 3 1 7VNX TYR A 4 ? UNP Q5JDQ4 ? ? 'expression tag' -3 4 1 7VNX PHE A 5 ? UNP Q5JDQ4 ? ? 'expression tag' -2 5 1 7VNX GLN A 6 ? UNP Q5JDQ4 ? ? 'expression tag' -1 6 1 7VNX GLY A 7 ? UNP Q5JDQ4 ? ? 'expression tag' 0 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 540 ? 1 MORE 1 ? 1 'SSA (A^2)' 10670 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 15 ? GLU A 29 ? SER A 8 GLU A 22 1 ? 15 HELX_P HELX_P2 AA2 PRO A 65 ? PHE A 82 ? PRO A 58 PHE A 75 1 ? 18 HELX_P HELX_P3 AA3 LEU A 111 ? ALA A 113 ? LEU A 104 ALA A 106 5 ? 3 HELX_P HELX_P4 AA4 GLU A 116 ? LEU A 133 ? GLU A 109 LEU A 126 1 ? 18 HELX_P HELX_P5 AA5 ASN A 166 ? ILE A 177 ? ASN A 159 ILE A 170 1 ? 12 HELX_P HELX_P6 AA6 ASN A 180 ? GLY A 191 ? ASN A 173 GLY A 184 1 ? 12 HELX_P HELX_P7 AA7 ASP A 193 ? GLY A 211 ? ASP A 186 GLY A 204 1 ? 19 HELX_P HELX_P8 AA8 LEU A 213 ? SER A 221 ? LEU A 206 SER A 214 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 31 ? LYS A 39 ? VAL A 24 LYS A 32 AA1 2 SER A 43 ? LEU A 50 ? SER A 36 LEU A 43 AA1 3 ARG A 53 ? GLN A 60 ? ARG A 46 GLN A 53 AA1 4 LEU A 97 ? GLU A 103 ? LEU A 90 GLU A 96 AA1 5 ILE A 88 ? PHE A 94 ? ILE A 81 PHE A 87 AA2 1 GLY A 107 ? PRO A 109 ? GLY A 100 PRO A 102 AA2 2 ILE A 146 ? GLY A 149 ? ILE A 139 GLY A 142 AA2 3 VAL A 152 ? LEU A 154 ? VAL A 145 LEU A 147 AA3 1 ILE A 135 ? ASP A 136 ? ILE A 128 ASP A 129 AA3 2 GLY A 161 ? PHE A 162 ? GLY A 154 PHE A 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 37 ? N LEU A 30 O VAL A 45 ? O VAL A 38 AA1 2 3 N LEU A 44 ? N LEU A 37 O LEU A 59 ? O LEU A 52 AA1 3 4 N LYS A 58 ? N LYS A 51 O LEU A 100 ? O LEU A 93 AA1 4 5 O ILE A 101 ? O ILE A 94 N ILE A 89 ? N ILE A 82 AA2 1 2 N GLU A 108 ? N GLU A 101 O ILE A 148 ? O ILE A 141 AA2 2 3 N ILE A 147 ? N ILE A 140 O TYR A 153 ? O TYR A 146 AA3 1 2 N ASP A 136 ? N ASP A 129 O GLY A 161 ? O GLY A 154 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 149 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 68.76 _pdbx_validate_torsion.psi 82.26 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 33.9459 19.2116 -20.6287 0.4013 ? 0.0173 ? 0.0168 ? 0.2793 ? 0.0127 ? 0.3061 ? 8.8954 ? -3.4908 ? 4.7098 ? 3.0964 ? -2.2443 ? 9.2220 ? 0.1688 ? 0.3023 ? 0.5593 ? -0.2688 ? -0.3535 ? -0.1233 ? 0.1078 ? 0.2031 ? 0.1782 ? 2 'X-RAY DIFFRACTION' ? refined 24.7574 23.5236 -11.2508 0.2986 ? 0.0166 ? -0.0342 ? 0.2937 ? -0.0077 ? 0.3080 ? 3.2043 ? -1.4239 ? -3.0304 ? 2.5846 ? 2.0685 ? 3.6437 ? -0.0836 ? -0.0663 ? 0.0038 ? -0.0199 ? 0.0491 ? -0.0668 ? 0.0718 ? 0.1353 ? 0.0418 ? 3 'X-RAY DIFFRACTION' ? refined 20.9308 41.0993 -0.1341 0.2428 ? 0.0204 ? 0.0064 ? 0.3208 ? 0.0382 ? 0.2714 ? 2.6067 ? 0.1791 ? 0.6981 ? 5.0465 ? -0.7076 ? 2.4099 ? -0.0500 ? 0.2210 ? 0.0755 ? 0.0041 ? -0.0132 ? -0.0733 ? -0.1161 ? 0.2491 ? 0.0684 ? 4 'X-RAY DIFFRACTION' ? refined 14.6931 48.7740 11.9378 0.4075 ? 0.0806 ? 0.0247 ? 0.4421 ? -0.0824 ? 0.3185 ? 8.0744 ? 1.6883 ? -0.4569 ? 5.8417 ? -3.1996 ? 7.6355 ? -0.1336 ? -0.8866 ? 0.6195 ? 0.8370 ? 0.0909 ? 0.1062 ? -0.9796 ? 0.0366 ? 0.0709 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 1 ? ? ? A 23 ? ? '(chain A and resid 1:23)' 2 'X-RAY DIFFRACTION' 2 ? ? A 24 ? ? ? A 99 ? ? '(chain A and resid 24:99)' 3 'X-RAY DIFFRACTION' 3 ? ? A 100 ? ? ? A 185 ? ? '(chain A and resid 100:185)' 4 'X-RAY DIFFRACTION' 4 ? ? A 186 ? ? ? A 216 ? ? '(chain A and resid 186:216)' # _pdbx_entry_details.entry_id 7VNX _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU -6 ? A GLU 1 2 1 Y 1 A ASN -5 ? A ASN 2 3 1 Y 1 A LEU -4 ? A LEU 3 4 1 Y 1 A TYR -3 ? A TYR 4 5 1 Y 1 A PHE -2 ? A PHE 5 6 1 Y 1 A GLN -1 ? A GLN 6 7 1 Y 1 A GLY 0 ? A GLY 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GMP "O5'" O N N 123 GMP "C5'" C N N 124 GMP "C4'" C N R 125 GMP "O4'" O N N 126 GMP "C3'" C N S 127 GMP "O3'" O N N 128 GMP "C2'" C N R 129 GMP "O2'" O N N 130 GMP "C1'" C N R 131 GMP N9 N Y N 132 GMP C8 C Y N 133 GMP N7 N Y N 134 GMP C5 C Y N 135 GMP C6 C N N 136 GMP O6 O N N 137 GMP N1 N N N 138 GMP C2 C N N 139 GMP N2 N N N 140 GMP N3 N N N 141 GMP C4 C Y N 142 GMP "HO5'" H N N 143 GMP "H5'1" H N N 144 GMP "H5'2" H N N 145 GMP "H4'" H N N 146 GMP "H3'" H N N 147 GMP "HO3'" H N N 148 GMP "H2'" H N N 149 GMP "HO2'" H N N 150 GMP "H1'" H N N 151 GMP H8 H N N 152 GMP HN1 H N N 153 GMP HN21 H N N 154 GMP HN22 H N N 155 HIS N N N N 156 HIS CA C N S 157 HIS C C N N 158 HIS O O N N 159 HIS CB C N N 160 HIS CG C Y N 161 HIS ND1 N Y N 162 HIS CD2 C Y N 163 HIS CE1 C Y N 164 HIS NE2 N Y N 165 HIS OXT O N N 166 HIS H H N N 167 HIS H2 H N N 168 HIS HA H N N 169 HIS HB2 H N N 170 HIS HB3 H N N 171 HIS HD1 H N N 172 HIS HD2 H N N 173 HIS HE1 H N N 174 HIS HE2 H N N 175 HIS HXT H N N 176 HOH O O N N 177 HOH H1 H N N 178 HOH H2 H N N 179 ILE N N N N 180 ILE CA C N S 181 ILE C C N N 182 ILE O O N N 183 ILE CB C N S 184 ILE CG1 C N N 185 ILE CG2 C N N 186 ILE CD1 C N N 187 ILE OXT O N N 188 ILE H H N N 189 ILE H2 H N N 190 ILE HA H N N 191 ILE HB H N N 192 ILE HG12 H N N 193 ILE HG13 H N N 194 ILE HG21 H N N 195 ILE HG22 H N N 196 ILE HG23 H N N 197 ILE HD11 H N N 198 ILE HD12 H N N 199 ILE HD13 H N N 200 ILE HXT H N N 201 LEU N N N N 202 LEU CA C N S 203 LEU C C N N 204 LEU O O N N 205 LEU CB C N N 206 LEU CG C N N 207 LEU CD1 C N N 208 LEU CD2 C N N 209 LEU OXT O N N 210 LEU H H N N 211 LEU H2 H N N 212 LEU HA H N N 213 LEU HB2 H N N 214 LEU HB3 H N N 215 LEU HG H N N 216 LEU HD11 H N N 217 LEU HD12 H N N 218 LEU HD13 H N N 219 LEU HD21 H N N 220 LEU HD22 H N N 221 LEU HD23 H N N 222 LEU HXT H N N 223 LYS N N N N 224 LYS CA C N S 225 LYS C C N N 226 LYS O O N N 227 LYS CB C N N 228 LYS CG C N N 229 LYS CD C N N 230 LYS CE C N N 231 LYS NZ N N N 232 LYS OXT O N N 233 LYS H H N N 234 LYS H2 H N N 235 LYS HA H N N 236 LYS HB2 H N N 237 LYS HB3 H N N 238 LYS HG2 H N N 239 LYS HG3 H N N 240 LYS HD2 H N N 241 LYS HD3 H N N 242 LYS HE2 H N N 243 LYS HE3 H N N 244 LYS HZ1 H N N 245 LYS HZ2 H N N 246 LYS HZ3 H N N 247 LYS HXT H N N 248 MET N N N N 249 MET CA C N S 250 MET C C N N 251 MET O O N N 252 MET CB C N N 253 MET CG C N N 254 MET SD S N N 255 MET CE C N N 256 MET OXT O N N 257 MET H H N N 258 MET H2 H N N 259 MET HA H N N 260 MET HB2 H N N 261 MET HB3 H N N 262 MET HG2 H N N 263 MET HG3 H N N 264 MET HE1 H N N 265 MET HE2 H N N 266 MET HE3 H N N 267 MET HXT H N N 268 PHE N N N N 269 PHE CA C N S 270 PHE C C N N 271 PHE O O N N 272 PHE CB C N N 273 PHE CG C Y N 274 PHE CD1 C Y N 275 PHE CD2 C Y N 276 PHE CE1 C Y N 277 PHE CE2 C Y N 278 PHE CZ C Y N 279 PHE OXT O N N 280 PHE H H N N 281 PHE H2 H N N 282 PHE HA H N N 283 PHE HB2 H N N 284 PHE HB3 H N N 285 PHE HD1 H N N 286 PHE HD2 H N N 287 PHE HE1 H N N 288 PHE HE2 H N N 289 PHE HZ H N N 290 PHE HXT H N N 291 PRO N N N N 292 PRO CA C N S 293 PRO C C N N 294 PRO O O N N 295 PRO CB C N N 296 PRO CG C N N 297 PRO CD C N N 298 PRO OXT O N N 299 PRO H H N N 300 PRO HA H N N 301 PRO HB2 H N N 302 PRO HB3 H N N 303 PRO HG2 H N N 304 PRO HG3 H N N 305 PRO HD2 H N N 306 PRO HD3 H N N 307 PRO HXT H N N 308 SER N N N N 309 SER CA C N S 310 SER C C N N 311 SER O O N N 312 SER CB C N N 313 SER OG O N N 314 SER OXT O N N 315 SER H H N N 316 SER H2 H N N 317 SER HA H N N 318 SER HB2 H N N 319 SER HB3 H N N 320 SER HG H N N 321 SER HXT H N N 322 THR N N N N 323 THR CA C N S 324 THR C C N N 325 THR O O N N 326 THR CB C N R 327 THR OG1 O N N 328 THR CG2 C N N 329 THR OXT O N N 330 THR H H N N 331 THR H2 H N N 332 THR HA H N N 333 THR HB H N N 334 THR HG1 H N N 335 THR HG21 H N N 336 THR HG22 H N N 337 THR HG23 H N N 338 THR HXT H N N 339 TYR N N N N 340 TYR CA C N S 341 TYR C C N N 342 TYR O O N N 343 TYR CB C N N 344 TYR CG C Y N 345 TYR CD1 C Y N 346 TYR CD2 C Y N 347 TYR CE1 C Y N 348 TYR CE2 C Y N 349 TYR CZ C Y N 350 TYR OH O N N 351 TYR OXT O N N 352 TYR H H N N 353 TYR H2 H N N 354 TYR HA H N N 355 TYR HB2 H N N 356 TYR HB3 H N N 357 TYR HD1 H N N 358 TYR HD2 H N N 359 TYR HE1 H N N 360 TYR HE2 H N N 361 TYR HH H N N 362 TYR HXT H N N 363 VAL N N N N 364 VAL CA C N S 365 VAL C C N N 366 VAL O O N N 367 VAL CB C N N 368 VAL CG1 C N N 369 VAL CG2 C N N 370 VAL OXT O N N 371 VAL H H N N 372 VAL H2 H N N 373 VAL HA H N N 374 VAL HB H N N 375 VAL HG11 H N N 376 VAL HG12 H N N 377 VAL HG13 H N N 378 VAL HG21 H N N 379 VAL HG22 H N N 380 VAL HG23 H N N 381 VAL HXT H N N 382 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GMP "O5'" "C5'" sing N N 116 GMP "O5'" "HO5'" sing N N 117 GMP "C5'" "C4'" sing N N 118 GMP "C5'" "H5'1" sing N N 119 GMP "C5'" "H5'2" sing N N 120 GMP "C4'" "O4'" sing N N 121 GMP "C4'" "C3'" sing N N 122 GMP "C4'" "H4'" sing N N 123 GMP "O4'" "C1'" sing N N 124 GMP "C3'" "O3'" sing N N 125 GMP "C3'" "C2'" sing N N 126 GMP "C3'" "H3'" sing N N 127 GMP "O3'" "HO3'" sing N N 128 GMP "C2'" "O2'" sing N N 129 GMP "C2'" "C1'" sing N N 130 GMP "C2'" "H2'" sing N N 131 GMP "O2'" "HO2'" sing N N 132 GMP "C1'" N9 sing N N 133 GMP "C1'" "H1'" sing N N 134 GMP N9 C8 sing Y N 135 GMP N9 C4 sing Y N 136 GMP C8 N7 doub Y N 137 GMP C8 H8 sing N N 138 GMP N7 C5 sing Y N 139 GMP C5 C6 sing N N 140 GMP C5 C4 doub Y N 141 GMP C6 O6 doub N N 142 GMP C6 N1 sing N N 143 GMP N1 C2 sing N N 144 GMP N1 HN1 sing N N 145 GMP C2 N2 sing N N 146 GMP C2 N3 doub N N 147 GMP N2 HN21 sing N N 148 GMP N2 HN22 sing N N 149 GMP N3 C4 sing N N 150 HIS N CA sing N N 151 HIS N H sing N N 152 HIS N H2 sing N N 153 HIS CA C sing N N 154 HIS CA CB sing N N 155 HIS CA HA sing N N 156 HIS C O doub N N 157 HIS C OXT sing N N 158 HIS CB CG sing N N 159 HIS CB HB2 sing N N 160 HIS CB HB3 sing N N 161 HIS CG ND1 sing Y N 162 HIS CG CD2 doub Y N 163 HIS ND1 CE1 doub Y N 164 HIS ND1 HD1 sing N N 165 HIS CD2 NE2 sing Y N 166 HIS CD2 HD2 sing N N 167 HIS CE1 NE2 sing Y N 168 HIS CE1 HE1 sing N N 169 HIS NE2 HE2 sing N N 170 HIS OXT HXT sing N N 171 HOH O H1 sing N N 172 HOH O H2 sing N N 173 ILE N CA sing N N 174 ILE N H sing N N 175 ILE N H2 sing N N 176 ILE CA C sing N N 177 ILE CA CB sing N N 178 ILE CA HA sing N N 179 ILE C O doub N N 180 ILE C OXT sing N N 181 ILE CB CG1 sing N N 182 ILE CB CG2 sing N N 183 ILE CB HB sing N N 184 ILE CG1 CD1 sing N N 185 ILE CG1 HG12 sing N N 186 ILE CG1 HG13 sing N N 187 ILE CG2 HG21 sing N N 188 ILE CG2 HG22 sing N N 189 ILE CG2 HG23 sing N N 190 ILE CD1 HD11 sing N N 191 ILE CD1 HD12 sing N N 192 ILE CD1 HD13 sing N N 193 ILE OXT HXT sing N N 194 LEU N CA sing N N 195 LEU N H sing N N 196 LEU N H2 sing N N 197 LEU CA C sing N N 198 LEU CA CB sing N N 199 LEU CA HA sing N N 200 LEU C O doub N N 201 LEU C OXT sing N N 202 LEU CB CG sing N N 203 LEU CB HB2 sing N N 204 LEU CB HB3 sing N N 205 LEU CG CD1 sing N N 206 LEU CG CD2 sing N N 207 LEU CG HG sing N N 208 LEU CD1 HD11 sing N N 209 LEU CD1 HD12 sing N N 210 LEU CD1 HD13 sing N N 211 LEU CD2 HD21 sing N N 212 LEU CD2 HD22 sing N N 213 LEU CD2 HD23 sing N N 214 LEU OXT HXT sing N N 215 LYS N CA sing N N 216 LYS N H sing N N 217 LYS N H2 sing N N 218 LYS CA C sing N N 219 LYS CA CB sing N N 220 LYS CA HA sing N N 221 LYS C O doub N N 222 LYS C OXT sing N N 223 LYS CB CG sing N N 224 LYS CB HB2 sing N N 225 LYS CB HB3 sing N N 226 LYS CG CD sing N N 227 LYS CG HG2 sing N N 228 LYS CG HG3 sing N N 229 LYS CD CE sing N N 230 LYS CD HD2 sing N N 231 LYS CD HD3 sing N N 232 LYS CE NZ sing N N 233 LYS CE HE2 sing N N 234 LYS CE HE3 sing N N 235 LYS NZ HZ1 sing N N 236 LYS NZ HZ2 sing N N 237 LYS NZ HZ3 sing N N 238 LYS OXT HXT sing N N 239 MET N CA sing N N 240 MET N H sing N N 241 MET N H2 sing N N 242 MET CA C sing N N 243 MET CA CB sing N N 244 MET CA HA sing N N 245 MET C O doub N N 246 MET C OXT sing N N 247 MET CB CG sing N N 248 MET CB HB2 sing N N 249 MET CB HB3 sing N N 250 MET CG SD sing N N 251 MET CG HG2 sing N N 252 MET CG HG3 sing N N 253 MET SD CE sing N N 254 MET CE HE1 sing N N 255 MET CE HE2 sing N N 256 MET CE HE3 sing N N 257 MET OXT HXT sing N N 258 PHE N CA sing N N 259 PHE N H sing N N 260 PHE N H2 sing N N 261 PHE CA C sing N N 262 PHE CA CB sing N N 263 PHE CA HA sing N N 264 PHE C O doub N N 265 PHE C OXT sing N N 266 PHE CB CG sing N N 267 PHE CB HB2 sing N N 268 PHE CB HB3 sing N N 269 PHE CG CD1 doub Y N 270 PHE CG CD2 sing Y N 271 PHE CD1 CE1 sing Y N 272 PHE CD1 HD1 sing N N 273 PHE CD2 CE2 doub Y N 274 PHE CD2 HD2 sing N N 275 PHE CE1 CZ doub Y N 276 PHE CE1 HE1 sing N N 277 PHE CE2 CZ sing Y N 278 PHE CE2 HE2 sing N N 279 PHE CZ HZ sing N N 280 PHE OXT HXT sing N N 281 PRO N CA sing N N 282 PRO N CD sing N N 283 PRO N H sing N N 284 PRO CA C sing N N 285 PRO CA CB sing N N 286 PRO CA HA sing N N 287 PRO C O doub N N 288 PRO C OXT sing N N 289 PRO CB CG sing N N 290 PRO CB HB2 sing N N 291 PRO CB HB3 sing N N 292 PRO CG CD sing N N 293 PRO CG HG2 sing N N 294 PRO CG HG3 sing N N 295 PRO CD HD2 sing N N 296 PRO CD HD3 sing N N 297 PRO OXT HXT sing N N 298 SER N CA sing N N 299 SER N H sing N N 300 SER N H2 sing N N 301 SER CA C sing N N 302 SER CA CB sing N N 303 SER CA HA sing N N 304 SER C O doub N N 305 SER C OXT sing N N 306 SER CB OG sing N N 307 SER CB HB2 sing N N 308 SER CB HB3 sing N N 309 SER OG HG sing N N 310 SER OXT HXT sing N N 311 THR N CA sing N N 312 THR N H sing N N 313 THR N H2 sing N N 314 THR CA C sing N N 315 THR CA CB sing N N 316 THR CA HA sing N N 317 THR C O doub N N 318 THR C OXT sing N N 319 THR CB OG1 sing N N 320 THR CB CG2 sing N N 321 THR CB HB sing N N 322 THR OG1 HG1 sing N N 323 THR CG2 HG21 sing N N 324 THR CG2 HG22 sing N N 325 THR CG2 HG23 sing N N 326 THR OXT HXT sing N N 327 TYR N CA sing N N 328 TYR N H sing N N 329 TYR N H2 sing N N 330 TYR CA C sing N N 331 TYR CA CB sing N N 332 TYR CA HA sing N N 333 TYR C O doub N N 334 TYR C OXT sing N N 335 TYR CB CG sing N N 336 TYR CB HB2 sing N N 337 TYR CB HB3 sing N N 338 TYR CG CD1 doub Y N 339 TYR CG CD2 sing Y N 340 TYR CD1 CE1 sing Y N 341 TYR CD1 HD1 sing N N 342 TYR CD2 CE2 doub Y N 343 TYR CD2 HD2 sing N N 344 TYR CE1 CZ doub Y N 345 TYR CE1 HE1 sing N N 346 TYR CE2 CZ sing Y N 347 TYR CE2 HE2 sing N N 348 TYR CZ OH sing N N 349 TYR OH HH sing N N 350 TYR OXT HXT sing N N 351 VAL N CA sing N N 352 VAL N H sing N N 353 VAL N H2 sing N N 354 VAL CA C sing N N 355 VAL CA CB sing N N 356 VAL CA HA sing N N 357 VAL C O doub N N 358 VAL C OXT sing N N 359 VAL CB CG1 sing N N 360 VAL CB CG2 sing N N 361 VAL CB HB sing N N 362 VAL CG1 HG11 sing N N 363 VAL CG1 HG12 sing N N 364 VAL CG1 HG13 sing N N 365 VAL CG2 HG21 sing N N 366 VAL CG2 HG22 sing N N 367 VAL CG2 HG23 sing N N 368 VAL OXT HXT sing N N 369 # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science (JSPS)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number 18H03980 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GMP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GMP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _atom_sites.entry_id 7VNX _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014959 _atom_sites.fract_transf_matrix[1][2] 0.008637 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017273 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010175 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ # loop_ #