HEADER HYDROLASE/HYDROLASE INHIBITOR 12-OCT-21 7VO7 TITLE CRYSTAL STRUCTURE OF TRYPSIN IN COMPLEX WITH LIMA BEAN TRYPSIN TITLE 2 INHIBITOR AT 2.25A RESOLUTION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATIONIC TRYPSIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA-TRYPSIN; COMPND 5 EC: 3.4.21.4; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BOWMAN-BIRK TYPE PROTEINASE INHIBITOR; COMPND 8 CHAIN: C; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: PHASEOLUS LUNATUS; SOURCE 8 ORGANISM_COMMON: LIMA BEAN; SOURCE 9 ORGANISM_TAXID: 3884 KEYWDS PROTEASE, TRYPSIN LIMA BEAN COMPLEX, HYDROLASE-HYDROLASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.S.AHMAD,Z.AKBAR,M.I.CHOUDHARY REVDAT 3 29-NOV-23 7VO7 1 REMARK REVDAT 2 28-DEC-22 7VO7 1 JRNL REVDAT 1 17-AUG-22 7VO7 0 JRNL AUTH M.S.AHMAD,Z.AKBAR,M.I.CHOUDHARY JRNL TITL INSIGHT INTO THE STRUCTURAL BASIS OF THE DUAL INHIBITORY JRNL TITL 2 MODE OF LIMA BEAN (PHASEOLUS LUNATUS) SERINE PROTEASE JRNL TITL 3 INHIBITOR. JRNL REF PROTEINS V. 91 22 2023 JRNL REFN ESSN 1097-0134 JRNL PMID 35927030 JRNL DOI 10.1002/PROT.26407 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24229 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.380 REMARK 3 FREE R VALUE TEST SET COUNT : 1304 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 17.9100 - 4.6600 1.00 2589 133 0.1736 0.1800 REMARK 3 2 4.6500 - 3.7100 1.00 2572 134 0.1422 0.1559 REMARK 3 3 3.7100 - 3.2400 1.00 2547 140 0.1521 0.2299 REMARK 3 4 3.2400 - 2.9500 1.00 2510 168 0.1832 0.2505 REMARK 3 5 2.9500 - 2.7400 1.00 2566 133 0.1996 0.3058 REMARK 3 6 2.7400 - 2.5800 1.00 2491 175 0.2005 0.2631 REMARK 3 7 2.5700 - 2.4500 1.00 2576 136 0.2152 0.2883 REMARK 3 8 2.4500 - 2.3400 1.00 2547 132 0.2203 0.2694 REMARK 3 9 2.3400 - 2.2500 1.00 2527 153 0.2271 0.2955 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3782 REMARK 3 ANGLE : 0.587 5125 REMARK 3 CHIRALITY : 0.046 577 REMARK 3 PLANARITY : 0.003 657 REMARK 3 DIHEDRAL : 10.985 1348 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7264 23.3313 6.1288 REMARK 3 T TENSOR REMARK 3 T11: 0.1172 T22: 0.0714 REMARK 3 T33: 0.0871 T12: 0.0088 REMARK 3 T13: -0.0392 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.5429 L22: 1.2839 REMARK 3 L33: 1.2341 L12: -0.1993 REMARK 3 L13: -0.2618 L23: -0.3498 REMARK 3 S TENSOR REMARK 3 S11: -0.0798 S12: -0.0785 S13: 0.0103 REMARK 3 S21: 0.0925 S22: 0.0858 S23: -0.0130 REMARK 3 S31: -0.0050 S32: 0.0173 S33: -0.0137 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.7904 26.9287 3.3992 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: 0.1100 REMARK 3 T33: 0.1633 T12: -0.0454 REMARK 3 T13: -0.0459 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.7680 L22: 0.7579 REMARK 3 L33: 1.9896 L12: -0.1427 REMARK 3 L13: 0.1899 L23: 0.4809 REMARK 3 S TENSOR REMARK 3 S11: -0.0273 S12: 0.1036 S13: 0.1282 REMARK 3 S21: 0.0593 S22: 0.0194 S23: -0.1915 REMARK 3 S31: -0.1381 S32: 0.3712 S33: -0.0706 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2866 9.6847 -1.8504 REMARK 3 T TENSOR REMARK 3 T11: 0.2674 T22: 0.1335 REMARK 3 T33: 0.1662 T12: -0.0295 REMARK 3 T13: -0.0530 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 3.0351 L22: 2.1508 REMARK 3 L33: 6.8309 L12: -0.6682 REMARK 3 L13: -0.5475 L23: 0.1114 REMARK 3 S TENSOR REMARK 3 S11: 0.2400 S12: 0.1419 S13: -0.5520 REMARK 3 S21: -0.6283 S22: -0.1200 S23: 0.1527 REMARK 3 S31: 0.7246 S32: -0.8724 S33: -0.1629 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6202 26.4642 -8.9519 REMARK 3 T TENSOR REMARK 3 T11: 0.1171 T22: 0.0906 REMARK 3 T33: 0.0933 T12: -0.0050 REMARK 3 T13: -0.0135 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 1.3340 L22: 0.7900 REMARK 3 L33: 1.4691 L12: -0.1297 REMARK 3 L13: -0.1710 L23: -0.3286 REMARK 3 S TENSOR REMARK 3 S11: 0.0939 S12: 0.0971 S13: 0.0557 REMARK 3 S21: -0.0723 S22: -0.0455 S23: -0.0946 REMARK 3 S31: 0.0691 S32: 0.0718 S33: -0.0384 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6047 46.6516 -33.7887 REMARK 3 T TENSOR REMARK 3 T11: 0.0757 T22: 0.1074 REMARK 3 T33: 0.0910 T12: 0.0085 REMARK 3 T13: -0.0069 T23: 0.0345 REMARK 3 L TENSOR REMARK 3 L11: 1.1915 L22: 0.5721 REMARK 3 L33: 1.5166 L12: -0.0699 REMARK 3 L13: 0.4258 L23: -0.0883 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: -0.0096 S13: 0.0732 REMARK 3 S21: 0.0215 S22: 0.0405 S23: 0.0071 REMARK 3 S31: -0.1328 S32: -0.0434 S33: -0.0268 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0574 55.8909 -31.1364 REMARK 3 T TENSOR REMARK 3 T11: 0.0948 T22: 0.0917 REMARK 3 T33: 0.1681 T12: -0.0325 REMARK 3 T13: -0.0111 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.1075 L22: 0.7709 REMARK 3 L33: 2.5663 L12: -0.1054 REMARK 3 L13: -0.1192 L23: -0.2909 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: 0.0317 S13: 0.1364 REMARK 3 S21: 0.0732 S22: -0.0037 S23: -0.1030 REMARK 3 S31: -0.3714 S32: 0.1016 S33: 0.0163 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 141 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3212 44.2532 -25.9285 REMARK 3 T TENSOR REMARK 3 T11: 0.1226 T22: 0.2187 REMARK 3 T33: 0.2157 T12: -0.0012 REMARK 3 T13: -0.0036 T23: 0.0417 REMARK 3 L TENSOR REMARK 3 L11: 4.0764 L22: 3.0380 REMARK 3 L33: 3.0428 L12: -0.5918 REMARK 3 L13: 0.4970 L23: 2.3484 REMARK 3 S TENSOR REMARK 3 S11: -0.0758 S12: -0.2128 S13: -0.2487 REMARK 3 S21: 0.0517 S22: 0.1234 S23: 0.5928 REMARK 3 S31: 0.5262 S32: -0.5194 S33: -0.0984 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 156 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5501 48.6332 -18.8826 REMARK 3 T TENSOR REMARK 3 T11: 0.0843 T22: 0.1155 REMARK 3 T33: 0.1257 T12: 0.0044 REMARK 3 T13: -0.0396 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 0.8295 L22: 0.7099 REMARK 3 L33: 1.5073 L12: -0.3623 REMARK 3 L13: -0.0738 L23: 0.1033 REMARK 3 S TENSOR REMARK 3 S11: 0.0004 S12: -0.2125 S13: 0.1230 REMARK 3 S21: 0.0737 S22: 0.0312 S23: -0.0379 REMARK 3 S31: -0.0718 S32: -0.0516 S33: -0.0004 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 17 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8604 27.7460 -15.0997 REMARK 3 T TENSOR REMARK 3 T11: 0.2753 T22: 0.3783 REMARK 3 T33: 0.3383 T12: -0.0927 REMARK 3 T13: -0.0875 T23: 0.1213 REMARK 3 L TENSOR REMARK 3 L11: 1.4880 L22: 1.2106 REMARK 3 L33: 3.9360 L12: -0.3000 REMARK 3 L13: 1.8260 L23: -0.9997 REMARK 3 S TENSOR REMARK 3 S11: 0.4141 S12: -0.6273 S13: -0.5539 REMARK 3 S21: 0.0001 S22: -0.0044 S23: 0.1270 REMARK 3 S31: 0.7102 S32: -0.3993 S33: -0.3019 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 49 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6447 24.4598 -11.7080 REMARK 3 T TENSOR REMARK 3 T11: 0.3048 T22: 0.3037 REMARK 3 T33: 0.3230 T12: -0.0972 REMARK 3 T13: -0.1707 T23: 0.1468 REMARK 3 L TENSOR REMARK 3 L11: 0.3187 L22: 0.2021 REMARK 3 L33: 1.4513 L12: -0.2091 REMARK 3 L13: 0.4902 L23: -0.5342 REMARK 3 S TENSOR REMARK 3 S11: -0.0091 S12: -0.1426 S13: -0.0121 REMARK 3 S21: -0.3209 S22: 0.2916 S23: 0.2896 REMARK 3 S31: 0.4070 S32: -0.5026 S33: -0.1443 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VO7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300025011. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER D8 QUEST REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : BRUKER PHOTON II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROTEUM PLUS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24309 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 17.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.16900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 0.78100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6SY3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1-0.4 M LITHIUM SULFATE, AND 16% PEG REMARK 280 -3350., PH 7.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.90850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.95425 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 134.86275 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 130 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 27 77.82 -117.64 REMARK 500 ASP A 71 -80.75 -118.20 REMARK 500 SER A 214 -77.36 -115.56 REMARK 500 VAL B 27 76.16 -118.21 REMARK 500 ASP B 71 -77.43 -120.22 REMARK 500 SER B 214 -77.78 -111.03 REMARK 500 LYS C 26 32.63 -95.87 REMARK 500 ASP C 40 -55.05 -122.01 REMARK 500 SER C 41 5.13 28.75 REMARK 500 CYS C 42 64.16 -102.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 597 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B 605 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH B 606 DISTANCE = 6.67 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 70 OE1 REMARK 620 2 ASN A 72 O 89.3 REMARK 620 3 VAL A 75 O 157.8 76.4 REMARK 620 4 GLU A 80 OE2 112.6 153.5 86.2 REMARK 620 5 HOH A 406 O 91.2 94.0 106.5 71.7 REMARK 620 6 HOH A 439 O 73.5 99.6 92.0 100.9 159.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 70 OE1 REMARK 620 2 ASN B 72 O 85.3 REMARK 620 3 VAL B 75 O 157.8 78.4 REMARK 620 4 GLU B 80 OE2 117.4 152.5 82.9 REMARK 620 5 HOH B 402 O 86.4 82.8 106.1 83.4 REMARK 620 6 HOH B 419 O 74.9 101.7 93.6 99.3 160.3 REMARK 620 N 1 2 3 4 5 DBREF 7VO7 A 16 246 UNP P00760 TRY1_BOVIN 24 246 DBREF 7VO7 B 16 246 UNP P00760 TRY1_BOVIN 24 246 DBREF 7VO7 C 17 72 PDB 7VO7 7VO7 17 72 SEQRES 1 A 223 ILE VAL GLY GLY TYR THR CYS GLY ALA ASN THR VAL PRO SEQRES 2 A 223 TYR GLN VAL SER LEU ASN SER GLY TYR HIS PHE CYS GLY SEQRES 3 A 223 GLY SER LEU ILE ASN SER GLN TRP VAL VAL SER ALA ALA SEQRES 4 A 223 HIS CYS TYR LYS SER GLY ILE GLN VAL ARG LEU GLY GLU SEQRES 5 A 223 ASP ASN ILE ASN VAL VAL GLU GLY ASN GLU GLN PHE ILE SEQRES 6 A 223 SER ALA SER LYS SER ILE VAL HIS PRO SER TYR ASN SER SEQRES 7 A 223 ASN THR LEU ASN ASN ASP ILE MET LEU ILE LYS LEU LYS SEQRES 8 A 223 SER ALA ALA SER LEU ASN SER ARG VAL ALA SER ILE SER SEQRES 9 A 223 LEU PRO THR SER CYS ALA SER ALA GLY THR GLN CYS LEU SEQRES 10 A 223 ILE SER GLY TRP GLY ASN THR LYS SER SER GLY THR SER SEQRES 11 A 223 TYR PRO ASP VAL LEU LYS CYS LEU LYS ALA PRO ILE LEU SEQRES 12 A 223 SER ASP SER SER CYS LYS SER ALA TYR PRO GLY GLN ILE SEQRES 13 A 223 THR SER ASN MET PHE CYS ALA GLY TYR LEU GLU GLY GLY SEQRES 14 A 223 LYS ASP SER CYS GLN GLY ASP SER GLY GLY PRO VAL VAL SEQRES 15 A 223 CYS SER GLY LYS LEU GLN GLY ILE VAL SER TRP GLY SER SEQRES 16 A 223 GLY CYS ALA GLN LYS ASN LYS PRO GLY VAL TYR THR LYS SEQRES 17 A 223 VAL CYS ASN TYR VAL SER TRP ILE LYS GLN THR ILE ALA SEQRES 18 A 223 SER ASN SEQRES 1 B 223 ILE VAL GLY GLY TYR THR CYS GLY ALA ASN THR VAL PRO SEQRES 2 B 223 TYR GLN VAL SER LEU ASN SER GLY TYR HIS PHE CYS GLY SEQRES 3 B 223 GLY SER LEU ILE ASN SER GLN TRP VAL VAL SER ALA ALA SEQRES 4 B 223 HIS CYS TYR LYS SER GLY ILE GLN VAL ARG LEU GLY GLU SEQRES 5 B 223 ASP ASN ILE ASN VAL VAL GLU GLY ASN GLU GLN PHE ILE SEQRES 6 B 223 SER ALA SER LYS SER ILE VAL HIS PRO SER TYR ASN SER SEQRES 7 B 223 ASN THR LEU ASN ASN ASP ILE MET LEU ILE LYS LEU LYS SEQRES 8 B 223 SER ALA ALA SER LEU ASN SER ARG VAL ALA SER ILE SER SEQRES 9 B 223 LEU PRO THR SER CYS ALA SER ALA GLY THR GLN CYS LEU SEQRES 10 B 223 ILE SER GLY TRP GLY ASN THR LYS SER SER GLY THR SER SEQRES 11 B 223 TYR PRO ASP VAL LEU LYS CYS LEU LYS ALA PRO ILE LEU SEQRES 12 B 223 SER ASP SER SER CYS LYS SER ALA TYR PRO GLY GLN ILE SEQRES 13 B 223 THR SER ASN MET PHE CYS ALA GLY TYR LEU GLU GLY GLY SEQRES 14 B 223 LYS ASP SER CYS GLN GLY ASP SER GLY GLY PRO VAL VAL SEQRES 15 B 223 CYS SER GLY LYS LEU GLN GLY ILE VAL SER TRP GLY SER SEQRES 16 B 223 GLY CYS ALA GLN LYS ASN LYS PRO GLY VAL TYR THR LYS SEQRES 17 B 223 VAL CYS ASN TYR VAL SER TRP ILE LYS GLN THR ILE ALA SEQRES 18 B 223 SER ASN SEQRES 1 C 56 PRO CYS CYS ASP HIS CYS SER CYS THR LYS SER ILE PRO SEQRES 2 C 56 PRO GLN CYS ARG CYS THR ASP LEU ARG LEU ASP SER CYS SEQRES 3 C 56 HIS SER ALA CYS LYS SER CYS ILE CYS THR LEU SER ILE SEQRES 4 C 56 PRO ALA GLN CYS VAL CYS ASP ASP ILE ASP ASP PHE CYS SEQRES 5 C 56 TYR GLU PRO CYS HET GOL A 301 6 HET GOL A 302 6 HET GOL A 303 6 HET GOL A 304 6 HET CA A 305 1 HET GOL B 301 6 HET GOL B 302 6 HET CA B 303 1 HET CL B 304 1 HET CL B 305 1 HET NA B 306 1 HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL 6(C3 H8 O3) FORMUL 8 CA 2(CA 2+) FORMUL 12 CL 2(CL 1-) FORMUL 14 NA NA 1+ FORMUL 15 HOH *425(H2 O) HELIX 1 AA1 ALA A 55 TYR A 59 5 5 HELIX 2 AA2 SER A 164 TYR A 172 1 9 HELIX 3 AA3 TYR A 235 ASN A 246 1 12 HELIX 4 AA4 ALA B 55 TYR B 59 5 5 HELIX 5 AA5 SER B 164 TYR B 172 1 9 HELIX 6 AA6 TYR B 235 SER B 245 1 11 SHEET 1 AA1 7 TYR A 20 THR A 21 0 SHEET 2 AA1 7 LYS A 156 PRO A 161 -1 O CYS A 157 N TYR A 20 SHEET 3 AA1 7 GLN A 135 GLY A 140 -1 N ILE A 138 O LEU A 158 SHEET 4 AA1 7 PRO A 198 CYS A 201 -1 O VAL A 200 N LEU A 137 SHEET 5 AA1 7 LYS A 204 GLY A 216 -1 O LYS A 204 N CYS A 201 SHEET 6 AA1 7 GLY A 227 LYS A 231 -1 O VAL A 228 N TRP A 215 SHEET 7 AA1 7 MET A 180 ALA A 183 -1 N PHE A 181 O TYR A 229 SHEET 1 AA2 8 TYR A 20 THR A 21 0 SHEET 2 AA2 8 LYS A 156 PRO A 161 -1 O CYS A 157 N TYR A 20 SHEET 3 AA2 8 GLN A 135 GLY A 140 -1 N ILE A 138 O LEU A 158 SHEET 4 AA2 8 PRO A 198 CYS A 201 -1 O VAL A 200 N LEU A 137 SHEET 5 AA2 8 LYS A 204 GLY A 216 -1 O LYS A 204 N CYS A 201 SHEET 6 AA2 8 CYS C 49 THR C 52 -1 O CYS C 51 N GLY A 216 SHEET 7 AA2 8 CYS C 59 CYS C 61 -1 O VAL C 60 N ILE C 50 SHEET 8 AA2 8 LEU C 37 ARG C 38 -1 N ARG C 38 O CYS C 59 SHEET 1 AA3 7 GLN A 30 ASN A 34 0 SHEET 2 AA3 7 HIS A 40 ASN A 48 -1 O CYS A 42 N LEU A 33 SHEET 3 AA3 7 TRP A 51 SER A 54 -1 O VAL A 53 N SER A 45 SHEET 4 AA3 7 MET A 104 LEU A 108 -1 O MET A 104 N SER A 54 SHEET 5 AA3 7 GLN A 81 VAL A 90 -1 N ILE A 89 O LEU A 105 SHEET 6 AA3 7 GLN A 64 LEU A 67 -1 N LEU A 67 O GLN A 81 SHEET 7 AA3 7 GLN A 30 ASN A 34 -1 N ASN A 34 O GLN A 64 SHEET 1 AA4 7 TYR B 20 THR B 21 0 SHEET 2 AA4 7 LYS B 156 PRO B 161 -1 O CYS B 157 N TYR B 20 SHEET 3 AA4 7 GLN B 135 GLY B 140 -1 N ILE B 138 O LEU B 158 SHEET 4 AA4 7 PRO B 198 CYS B 201 -1 O VAL B 200 N LEU B 137 SHEET 5 AA4 7 LYS B 204 GLY B 216 -1 O LYS B 204 N CYS B 201 SHEET 6 AA4 7 GLY B 227 LYS B 231 -1 O VAL B 228 N TRP B 215 SHEET 7 AA4 7 MET B 180 ALA B 183 -1 N PHE B 181 O TYR B 229 SHEET 1 AA5 8 TYR B 20 THR B 21 0 SHEET 2 AA5 8 LYS B 156 PRO B 161 -1 O CYS B 157 N TYR B 20 SHEET 3 AA5 8 GLN B 135 GLY B 140 -1 N ILE B 138 O LEU B 158 SHEET 4 AA5 8 PRO B 198 CYS B 201 -1 O VAL B 200 N LEU B 137 SHEET 5 AA5 8 LYS B 204 GLY B 216 -1 O LYS B 204 N CYS B 201 SHEET 6 AA5 8 CYS C 22 THR C 25 -1 O CYS C 24 N GLY B 216 SHEET 7 AA5 8 CYS C 32 CYS C 34 -1 O ARG C 33 N SER C 23 SHEET 8 AA5 8 ILE C 64 ASP C 65 -1 O ASP C 65 N CYS C 32 SHEET 1 AA6 7 GLN B 30 ASN B 34 0 SHEET 2 AA6 7 HIS B 40 ASN B 48 -1 O CYS B 42 N LEU B 33 SHEET 3 AA6 7 TRP B 51 SER B 54 -1 O VAL B 53 N SER B 45 SHEET 4 AA6 7 MET B 104 LEU B 108 -1 O MET B 104 N SER B 54 SHEET 5 AA6 7 GLN B 81 VAL B 90 -1 N LYS B 87 O LYS B 107 SHEET 6 AA6 7 GLN B 64 LEU B 67 -1 N VAL B 65 O ILE B 83 SHEET 7 AA6 7 GLN B 30 ASN B 34 -1 N ASN B 34 O GLN B 64 SSBOND 1 CYS A 22 CYS A 157 1555 1555 2.03 SSBOND 2 CYS A 42 CYS A 58 1555 1555 2.03 SSBOND 3 CYS A 128 CYS A 233 1555 1555 2.03 SSBOND 4 CYS A 136 CYS A 201 1555 1555 2.03 SSBOND 5 CYS A 168 CYS A 182 1555 1555 2.03 SSBOND 6 CYS A 191 CYS A 220 1555 1555 2.03 SSBOND 7 CYS B 22 CYS B 157 1555 1555 2.03 SSBOND 8 CYS B 42 CYS B 58 1555 1555 2.03 SSBOND 9 CYS B 128 CYS B 233 1555 1555 2.03 SSBOND 10 CYS B 136 CYS B 201 1555 1555 2.03 SSBOND 11 CYS B 168 CYS B 182 1555 1555 2.03 SSBOND 12 CYS B 191 CYS B 220 1555 1555 2.03 SSBOND 13 CYS C 18 CYS C 72 1555 1555 2.03 SSBOND 14 CYS C 19 CYS C 34 1555 1555 2.03 SSBOND 15 CYS C 22 CYS C 68 1555 1555 2.03 SSBOND 16 CYS C 24 CYS C 32 1555 1555 2.03 SSBOND 17 CYS C 42 CYS C 49 1555 1555 2.03 SSBOND 18 CYS C 46 CYS C 61 1555 1555 2.03 SSBOND 19 CYS C 51 CYS C 59 1555 1555 2.03 LINK OE1 GLU A 70 CA CA A 305 1555 1555 2.32 LINK O ASN A 72 CA CA A 305 1555 1555 2.39 LINK O VAL A 75 CA CA A 305 1555 1555 2.35 LINK OE2 GLU A 80 CA CA A 305 1555 1555 2.46 LINK CA CA A 305 O HOH A 406 1555 1555 2.52 LINK CA CA A 305 O HOH A 439 1555 1555 2.42 LINK OE1 GLU B 70 CA CA B 303 1555 1555 2.33 LINK O ASN B 72 CA CA B 303 1555 1555 2.39 LINK O VAL B 75 CA CA B 303 1555 1555 2.36 LINK OE2 GLU B 80 CA CA B 303 1555 1555 2.41 LINK O LEU B 108 NA NA B 306 1555 1555 3.02 LINK CA CA B 303 O HOH B 402 1555 1555 2.38 LINK CA CA B 303 O HOH B 419 1555 1555 2.41 CISPEP 1 ILE C 28 PRO C 29 0 -0.72 CISPEP 2 ILE C 55 PRO C 56 0 0.38 CRYST1 54.009 54.009 179.817 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018515 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018515 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005561 0.00000