data_7VP1 # _entry.id 7VP1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.361 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7VP1 pdb_00007vp1 10.2210/pdb7vp1/pdb WWPDB D_1300021684 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7VP1 _pdbx_database_status.recvd_initial_deposition_date 2021-10-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, Y.' 1 ? 'Xu, Y.P.' 2 ? 'Wang, B.' 3 ? 'Su, X.D.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural basis for DNA recognition by TCP transcription factors' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Y.' 1 ? primary 'Xu, Y.P.' 2 ? primary 'Wang, B.' 3 ? primary 'Su, X.D.' 4 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7VP1 _cell.details ? _cell.formula_units_Z ? _cell.length_a 68.123 _cell.length_a_esd ? _cell.length_b 68.123 _cell.length_b_esd ? _cell.length_c 210.819 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7VP1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcription factor TCP10' 12045.242 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*C)-3') ; 3614.354 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*GP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3') ; 3712.430 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;(MSE)GSSHHHHHHSSGLVPRGSH(MSE)GLKGYSVGEGGGEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVR (MSE)SAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKL ; ;MGSSHHHHHHSSGLVPRGSHMGLKGYSVGEGGGEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRMSAHTAIQFYDV QDRLGYDRPSKAVDWLIKKAKTAIDKL ; A,B ? 2 polydeoxyribonucleotide no no '(DA)(DT)(DG)(DT)(DG)(DG)(DT)(DC)(DC)(DC)(DC)(DC)' ATGTGGTCCCCC C ? 3 polydeoxyribonucleotide no no '(DT)(DG)(DG)(DG)(DG)(DG)(DA)(DC)(DC)(DA)(DC)(DA)' TGGGGGACCACA D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MSE n 1 22 GLY n 1 23 LEU n 1 24 LYS n 1 25 GLY n 1 26 TYR n 1 27 SER n 1 28 VAL n 1 29 GLY n 1 30 GLU n 1 31 GLY n 1 32 GLY n 1 33 GLY n 1 34 GLU n 1 35 ILE n 1 36 VAL n 1 37 GLU n 1 38 VAL n 1 39 GLN n 1 40 GLY n 1 41 GLY n 1 42 HIS n 1 43 ILE n 1 44 ILE n 1 45 ARG n 1 46 ALA n 1 47 THR n 1 48 GLY n 1 49 ARG n 1 50 LYS n 1 51 ASP n 1 52 ARG n 1 53 HIS n 1 54 SER n 1 55 LYS n 1 56 VAL n 1 57 PHE n 1 58 THR n 1 59 SER n 1 60 LYS n 1 61 GLY n 1 62 PRO n 1 63 ARG n 1 64 ASP n 1 65 ARG n 1 66 ARG n 1 67 VAL n 1 68 ARG n 1 69 MSE n 1 70 SER n 1 71 ALA n 1 72 HIS n 1 73 THR n 1 74 ALA n 1 75 ILE n 1 76 GLN n 1 77 PHE n 1 78 TYR n 1 79 ASP n 1 80 VAL n 1 81 GLN n 1 82 ASP n 1 83 ARG n 1 84 LEU n 1 85 GLY n 1 86 TYR n 1 87 ASP n 1 88 ARG n 1 89 PRO n 1 90 SER n 1 91 LYS n 1 92 ALA n 1 93 VAL n 1 94 ASP n 1 95 TRP n 1 96 LEU n 1 97 ILE n 1 98 LYS n 1 99 LYS n 1 100 ALA n 1 101 LYS n 1 102 THR n 1 103 ALA n 1 104 ILE n 1 105 ASP n 1 106 LYS n 1 107 LEU n 2 1 DA n 2 2 DT n 2 3 DG n 2 4 DT n 2 5 DG n 2 6 DG n 2 7 DT n 2 8 DC n 2 9 DC n 2 10 DC n 2 11 DC n 2 12 DC n 3 1 DT n 3 2 DG n 3 3 DG n 3 4 DG n 3 5 DG n 3 6 DG n 3 7 DA n 3 8 DC n 3 9 DC n 3 10 DA n 3 11 DC n 3 12 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 107 _entity_src_gen.gene_src_common_name 'thale cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TCP10, At2g31070, T16B12.12' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 12 'synthetic construct' ? 32630 ? 3 1 sample 1 12 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP TCP10_ARATH O82277 ? 1 ;MGLKGYSVGEGGGEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKA KTAIDKL ; 1 2 PDB 7VP1 7VP1 ? 2 ? 1 3 PDB 7VP1 7VP1 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7VP1 A 21 ? 107 ? O82277 1 ? 87 ? 1 87 2 1 7VP1 B 21 ? 107 ? O82277 1 ? 87 ? 1 87 3 2 7VP1 C 1 ? 12 ? 7VP1 1 ? 12 ? 1 12 4 3 7VP1 D 1 ? 12 ? 7VP1 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7VP1 MSE A 1 ? UNP O82277 ? ? 'initiating methionine' -19 1 1 7VP1 GLY A 2 ? UNP O82277 ? ? 'expression tag' -18 2 1 7VP1 SER A 3 ? UNP O82277 ? ? 'expression tag' -17 3 1 7VP1 SER A 4 ? UNP O82277 ? ? 'expression tag' -16 4 1 7VP1 HIS A 5 ? UNP O82277 ? ? 'expression tag' -15 5 1 7VP1 HIS A 6 ? UNP O82277 ? ? 'expression tag' -14 6 1 7VP1 HIS A 7 ? UNP O82277 ? ? 'expression tag' -13 7 1 7VP1 HIS A 8 ? UNP O82277 ? ? 'expression tag' -12 8 1 7VP1 HIS A 9 ? UNP O82277 ? ? 'expression tag' -11 9 1 7VP1 HIS A 10 ? UNP O82277 ? ? 'expression tag' -10 10 1 7VP1 SER A 11 ? UNP O82277 ? ? 'expression tag' -9 11 1 7VP1 SER A 12 ? UNP O82277 ? ? 'expression tag' -8 12 1 7VP1 GLY A 13 ? UNP O82277 ? ? 'expression tag' -7 13 1 7VP1 LEU A 14 ? UNP O82277 ? ? 'expression tag' -6 14 1 7VP1 VAL A 15 ? UNP O82277 ? ? 'expression tag' -5 15 1 7VP1 PRO A 16 ? UNP O82277 ? ? 'expression tag' -4 16 1 7VP1 ARG A 17 ? UNP O82277 ? ? 'expression tag' -3 17 1 7VP1 GLY A 18 ? UNP O82277 ? ? 'expression tag' -2 18 1 7VP1 SER A 19 ? UNP O82277 ? ? 'expression tag' -1 19 1 7VP1 HIS A 20 ? UNP O82277 ? ? 'expression tag' 0 20 1 7VP1 MSE A 69 ? UNP O82277 LEU 49 'engineered mutation' 49 21 2 7VP1 MSE B 1 ? UNP O82277 ? ? 'initiating methionine' -19 22 2 7VP1 GLY B 2 ? UNP O82277 ? ? 'expression tag' -18 23 2 7VP1 SER B 3 ? UNP O82277 ? ? 'expression tag' -17 24 2 7VP1 SER B 4 ? UNP O82277 ? ? 'expression tag' -16 25 2 7VP1 HIS B 5 ? UNP O82277 ? ? 'expression tag' -15 26 2 7VP1 HIS B 6 ? UNP O82277 ? ? 'expression tag' -14 27 2 7VP1 HIS B 7 ? UNP O82277 ? ? 'expression tag' -13 28 2 7VP1 HIS B 8 ? UNP O82277 ? ? 'expression tag' -12 29 2 7VP1 HIS B 9 ? UNP O82277 ? ? 'expression tag' -11 30 2 7VP1 HIS B 10 ? UNP O82277 ? ? 'expression tag' -10 31 2 7VP1 SER B 11 ? UNP O82277 ? ? 'expression tag' -9 32 2 7VP1 SER B 12 ? UNP O82277 ? ? 'expression tag' -8 33 2 7VP1 GLY B 13 ? UNP O82277 ? ? 'expression tag' -7 34 2 7VP1 LEU B 14 ? UNP O82277 ? ? 'expression tag' -6 35 2 7VP1 VAL B 15 ? UNP O82277 ? ? 'expression tag' -5 36 2 7VP1 PRO B 16 ? UNP O82277 ? ? 'expression tag' -4 37 2 7VP1 ARG B 17 ? UNP O82277 ? ? 'expression tag' -3 38 2 7VP1 GLY B 18 ? UNP O82277 ? ? 'expression tag' -2 39 2 7VP1 SER B 19 ? UNP O82277 ? ? 'expression tag' -1 40 2 7VP1 HIS B 20 ? UNP O82277 ? ? 'expression tag' 0 41 2 7VP1 MSE B 69 ? UNP O82277 LEU 49 'engineered mutation' 49 42 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7VP1 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Potassium sodium tartrate tetrahydrate, 20% w/v Polyethylene glycol 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-12-09 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7VP1 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.902 _reflns.d_resolution_low 29.21 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 6982 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.52 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 20 _reflns.pdbx_Rmerge_I_obs 0.1173 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 38.48 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.1189 _reflns.pdbx_Rpim_I_all 0.01942 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 2.902 _reflns_shell.d_res_low 3.006 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 653 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.6148 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.6228 _reflns_shell.pdbx_Rpim_I_all 0.09861 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.975 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 112.500 _refine.B_iso_mean 49.7307 _refine.B_iso_min 16.880 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7VP1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.9020 _refine.ls_d_res_low 29.21 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6982 _refine.ls_number_reflns_R_free 1215 _refine.ls_number_reflns_R_work 10872 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.52 _refine.ls_percent_reflns_R_free 10.0500 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1838 _refine.ls_R_factor_R_free 0.2385 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1778 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.7800 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.9020 _refine_hist.d_res_low 29.21 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1442 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 143 _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 956 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1518 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.941 ? 2143 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.057 ? 235 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 190 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 19.788 ? 827 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.9020 3.0178 . . 134 1182 97.0000 . . . 0.2567 0.0000 0.1872 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0178 3.1550 . . 136 1203 100.0000 . . . 0.3238 0.0000 0.2099 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1550 3.3211 . . 134 1211 100.0000 . . . 0.2429 0.0000 0.1820 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3211 3.5289 . . 137 1210 100.0000 . . . 0.2443 0.0000 0.1788 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5289 3.8008 . . 134 1235 100.0000 . . . 0.3124 0.0000 0.1947 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8008 4.1823 . . 137 1194 100.0000 . . . 0.2337 0.0000 0.1744 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1823 4.7853 . . 134 1212 100.0000 . . . 0.1807 0.0000 0.1485 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.7853 6.0205 . . 134 1210 100.0000 . . . 0.2357 0.0000 0.1743 . . . . . . . . . . . 'X-RAY DIFFRACTION' 6.0205 29.21 . . 135 1215 100.0000 . . . 0.2074 0.0000 0.1804 . . . . . . . . . . . # _struct.entry_id 7VP1 _struct.title 'Structure of a transcription factor and DNA complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7VP1 _struct_keywords.text 'Complex, Transcription factor, TRANSCRIPTION, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 70 ? GLY A 85 ? SER A 50 GLY A 65 1 ? 16 HELX_P HELX_P2 AA2 ARG A 88 ? ALA A 100 ? ARG A 68 ALA A 80 1 ? 13 HELX_P HELX_P3 AA3 SER B 70 ? GLY B 85 ? SER B 50 GLY B 65 1 ? 16 HELX_P HELX_P4 AA4 ARG B 88 ? LYS B 99 ? ARG B 68 LYS B 79 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ARG 68 C ? ? ? 1_555 A MSE 69 N ? ? A ARG 48 A MSE 49 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A MSE 69 C ? ? ? 1_555 A SER 70 N ? ? A MSE 49 A SER 50 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? B ARG 68 C ? ? ? 1_555 B MSE 69 N ? ? B ARG 48 B MSE 49 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? B MSE 69 C ? ? ? 1_555 B SER 70 N ? ? B MSE 49 B SER 50 1_555 ? ? ? ? ? ? ? 1.329 ? ? hydrog1 hydrog ? ? C DT 2 N3 ? ? ? 1_555 D DA 12 N1 ? ? C DT 2 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DT 2 O4 ? ? ? 1_555 D DA 12 N6 ? ? C DT 2 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 11 N3 ? ? C DG 3 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 11 O2 ? ? C DG 3 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 11 N4 ? ? C DG 3 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 10 N1 ? ? C DT 4 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 10 N6 ? ? C DT 4 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 9 N3 ? ? C DG 5 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 9 O2 ? ? C DG 5 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 9 N4 ? ? C DG 5 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 6 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 6 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 6 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT 7 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DT 7 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT 7 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 6 N1 ? ? C DC 8 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 6 O6 ? ? C DC 8 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 6 N2 ? ? C DC 8 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 9 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 9 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 9 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 9 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 9 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 10 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 10 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 10 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 11 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 11 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 11 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 11 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 11 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 11 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 12 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 12 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 12 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 2 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 42 ? ILE A 44 ? HIS A 22 ILE A 24 AA1 2 LYS A 55 ? THR A 58 ? LYS A 35 THR A 38 AA1 3 GLY A 61 ? ARG A 63 ? GLY A 41 ARG A 43 AA2 1 ARG A 66 ? ARG A 68 ? ARG A 46 ARG A 48 AA2 2 ARG B 66 ? ARG B 68 ? ARG B 46 ARG B 48 AA3 1 VAL B 56 ? THR B 58 ? VAL B 36 THR B 38 AA3 2 GLY B 61 ? ARG B 63 ? GLY B 41 ARG B 43 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N HIS A 42 ? N HIS A 22 O PHE A 57 ? O PHE A 37 AA1 2 3 N THR A 58 ? N THR A 38 O GLY A 61 ? O GLY A 41 AA2 1 2 N VAL A 67 ? N VAL A 47 O VAL B 67 ? O VAL B 47 AA3 1 2 N THR B 58 ? N THR B 38 O GLY B 61 ? O GLY B 41 # _atom_sites.entry_id 7VP1 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014679 _atom_sites.fract_transf_matrix[1][2] 0.008475 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016950 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004743 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 ? ? ? A . n A 1 21 MSE 21 1 ? ? ? A . n A 1 22 GLY 22 2 ? ? ? A . n A 1 23 LEU 23 3 ? ? ? A . n A 1 24 LYS 24 4 ? ? ? A . n A 1 25 GLY 25 5 ? ? ? A . n A 1 26 TYR 26 6 ? ? ? A . n A 1 27 SER 27 7 ? ? ? A . n A 1 28 VAL 28 8 ? ? ? A . n A 1 29 GLY 29 9 ? ? ? A . n A 1 30 GLU 30 10 ? ? ? A . n A 1 31 GLY 31 11 ? ? ? A . n A 1 32 GLY 32 12 ? ? ? A . n A 1 33 GLY 33 13 ? ? ? A . n A 1 34 GLU 34 14 ? ? ? A . n A 1 35 ILE 35 15 ? ? ? A . n A 1 36 VAL 36 16 ? ? ? A . n A 1 37 GLU 37 17 ? ? ? A . n A 1 38 VAL 38 18 ? ? ? A . n A 1 39 GLN 39 19 ? ? ? A . n A 1 40 GLY 40 20 ? ? ? A . n A 1 41 GLY 41 21 21 GLY GLY A . n A 1 42 HIS 42 22 22 HIS HIS A . n A 1 43 ILE 43 23 23 ILE ILE A . n A 1 44 ILE 44 24 24 ILE ILE A . n A 1 45 ARG 45 25 25 ARG ARG A . n A 1 46 ALA 46 26 26 ALA ALA A . n A 1 47 THR 47 27 27 THR THR A . n A 1 48 GLY 48 28 ? ? ? A . n A 1 49 ARG 49 29 29 ARG ARG A . n A 1 50 LYS 50 30 30 LYS LYS A . n A 1 51 ASP 51 31 31 ASP ASP A . n A 1 52 ARG 52 32 32 ARG ARG A . n A 1 53 HIS 53 33 33 HIS HIS A . n A 1 54 SER 54 34 34 SER SER A . n A 1 55 LYS 55 35 35 LYS LYS A . n A 1 56 VAL 56 36 36 VAL VAL A . n A 1 57 PHE 57 37 37 PHE PHE A . n A 1 58 THR 58 38 38 THR THR A . n A 1 59 SER 59 39 39 SER SER A . n A 1 60 LYS 60 40 40 LYS LYS A . n A 1 61 GLY 61 41 41 GLY GLY A . n A 1 62 PRO 62 42 42 PRO PRO A . n A 1 63 ARG 63 43 43 ARG ARG A . n A 1 64 ASP 64 44 44 ASP ASP A . n A 1 65 ARG 65 45 45 ARG ARG A . n A 1 66 ARG 66 46 46 ARG ARG A . n A 1 67 VAL 67 47 47 VAL VAL A . n A 1 68 ARG 68 48 48 ARG ARG A . n A 1 69 MSE 69 49 49 MSE MSE A . n A 1 70 SER 70 50 50 SER SER A . n A 1 71 ALA 71 51 51 ALA ALA A . n A 1 72 HIS 72 52 52 HIS HIS A . n A 1 73 THR 73 53 53 THR THR A . n A 1 74 ALA 74 54 54 ALA ALA A . n A 1 75 ILE 75 55 55 ILE ILE A . n A 1 76 GLN 76 56 56 GLN GLN A . n A 1 77 PHE 77 57 57 PHE PHE A . n A 1 78 TYR 78 58 58 TYR TYR A . n A 1 79 ASP 79 59 59 ASP ASP A . n A 1 80 VAL 80 60 60 VAL VAL A . n A 1 81 GLN 81 61 61 GLN GLN A . n A 1 82 ASP 82 62 62 ASP ASP A . n A 1 83 ARG 83 63 63 ARG ARG A . n A 1 84 LEU 84 64 64 LEU LEU A . n A 1 85 GLY 85 65 65 GLY GLY A . n A 1 86 TYR 86 66 66 TYR TYR A . n A 1 87 ASP 87 67 67 ASP ASP A . n A 1 88 ARG 88 68 68 ARG ARG A . n A 1 89 PRO 89 69 69 PRO PRO A . n A 1 90 SER 90 70 70 SER SER A . n A 1 91 LYS 91 71 71 LYS LYS A . n A 1 92 ALA 92 72 72 ALA ALA A . n A 1 93 VAL 93 73 73 VAL VAL A . n A 1 94 ASP 94 74 74 ASP ASP A . n A 1 95 TRP 95 75 75 TRP TRP A . n A 1 96 LEU 96 76 76 LEU LEU A . n A 1 97 ILE 97 77 77 ILE ILE A . n A 1 98 LYS 98 78 78 LYS LYS A . n A 1 99 LYS 99 79 79 LYS LYS A . n A 1 100 ALA 100 80 80 ALA ALA A . n A 1 101 LYS 101 81 81 LYS LYS A . n A 1 102 THR 102 82 82 THR THR A . n A 1 103 ALA 103 83 83 ALA ALA A . n A 1 104 ILE 104 84 84 ILE ILE A . n A 1 105 ASP 105 85 85 ASP ASP A . n A 1 106 LYS 106 86 86 LYS LYS A . n A 1 107 LEU 107 87 ? ? ? A . n B 1 1 MSE 1 -19 ? ? ? B . n B 1 2 GLY 2 -18 ? ? ? B . n B 1 3 SER 3 -17 ? ? ? B . n B 1 4 SER 4 -16 ? ? ? B . n B 1 5 HIS 5 -15 ? ? ? B . n B 1 6 HIS 6 -14 ? ? ? B . n B 1 7 HIS 7 -13 ? ? ? B . n B 1 8 HIS 8 -12 ? ? ? B . n B 1 9 HIS 9 -11 ? ? ? B . n B 1 10 HIS 10 -10 ? ? ? B . n B 1 11 SER 11 -9 ? ? ? B . n B 1 12 SER 12 -8 ? ? ? B . n B 1 13 GLY 13 -7 ? ? ? B . n B 1 14 LEU 14 -6 ? ? ? B . n B 1 15 VAL 15 -5 ? ? ? B . n B 1 16 PRO 16 -4 ? ? ? B . n B 1 17 ARG 17 -3 ? ? ? B . n B 1 18 GLY 18 -2 ? ? ? B . n B 1 19 SER 19 -1 ? ? ? B . n B 1 20 HIS 20 0 ? ? ? B . n B 1 21 MSE 21 1 ? ? ? B . n B 1 22 GLY 22 2 ? ? ? B . n B 1 23 LEU 23 3 ? ? ? B . n B 1 24 LYS 24 4 ? ? ? B . n B 1 25 GLY 25 5 ? ? ? B . n B 1 26 TYR 26 6 ? ? ? B . n B 1 27 SER 27 7 ? ? ? B . n B 1 28 VAL 28 8 ? ? ? B . n B 1 29 GLY 29 9 ? ? ? B . n B 1 30 GLU 30 10 ? ? ? B . n B 1 31 GLY 31 11 ? ? ? B . n B 1 32 GLY 32 12 ? ? ? B . n B 1 33 GLY 33 13 ? ? ? B . n B 1 34 GLU 34 14 ? ? ? B . n B 1 35 ILE 35 15 ? ? ? B . n B 1 36 VAL 36 16 ? ? ? B . n B 1 37 GLU 37 17 ? ? ? B . n B 1 38 VAL 38 18 ? ? ? B . n B 1 39 GLN 39 19 ? ? ? B . n B 1 40 GLY 40 20 ? ? ? B . n B 1 41 GLY 41 21 ? ? ? B . n B 1 42 HIS 42 22 ? ? ? B . n B 1 43 ILE 43 23 ? ? ? B . n B 1 44 ILE 44 24 ? ? ? B . n B 1 45 ARG 45 25 ? ? ? B . n B 1 46 ALA 46 26 ? ? ? B . n B 1 47 THR 47 27 ? ? ? B . n B 1 48 GLY 48 28 ? ? ? B . n B 1 49 ARG 49 29 ? ? ? B . n B 1 50 LYS 50 30 ? ? ? B . n B 1 51 ASP 51 31 ? ? ? B . n B 1 52 ARG 52 32 32 ARG ARG B . n B 1 53 HIS 53 33 33 HIS HIS B . n B 1 54 SER 54 34 34 SER SER B . n B 1 55 LYS 55 35 35 LYS LYS B . n B 1 56 VAL 56 36 36 VAL VAL B . n B 1 57 PHE 57 37 37 PHE PHE B . n B 1 58 THR 58 38 38 THR THR B . n B 1 59 SER 59 39 39 SER SER B . n B 1 60 LYS 60 40 40 LYS LYS B . n B 1 61 GLY 61 41 41 GLY GLY B . n B 1 62 PRO 62 42 42 PRO PRO B . n B 1 63 ARG 63 43 43 ARG ARG B . n B 1 64 ASP 64 44 44 ASP ASP B . n B 1 65 ARG 65 45 45 ARG ARG B . n B 1 66 ARG 66 46 46 ARG ARG B . n B 1 67 VAL 67 47 47 VAL VAL B . n B 1 68 ARG 68 48 48 ARG ARG B . n B 1 69 MSE 69 49 49 MSE MSE B . n B 1 70 SER 70 50 50 SER SER B . n B 1 71 ALA 71 51 51 ALA ALA B . n B 1 72 HIS 72 52 52 HIS HIS B . n B 1 73 THR 73 53 53 THR THR B . n B 1 74 ALA 74 54 54 ALA ALA B . n B 1 75 ILE 75 55 55 ILE ILE B . n B 1 76 GLN 76 56 56 GLN GLN B . n B 1 77 PHE 77 57 57 PHE PHE B . n B 1 78 TYR 78 58 58 TYR TYR B . n B 1 79 ASP 79 59 59 ASP ASP B . n B 1 80 VAL 80 60 60 VAL VAL B . n B 1 81 GLN 81 61 61 GLN GLN B . n B 1 82 ASP 82 62 62 ASP ASP B . n B 1 83 ARG 83 63 63 ARG ARG B . n B 1 84 LEU 84 64 64 LEU LEU B . n B 1 85 GLY 85 65 65 GLY GLY B . n B 1 86 TYR 86 66 66 TYR TYR B . n B 1 87 ASP 87 67 67 ASP ASP B . n B 1 88 ARG 88 68 68 ARG ARG B . n B 1 89 PRO 89 69 69 PRO PRO B . n B 1 90 SER 90 70 70 SER SER B . n B 1 91 LYS 91 71 71 LYS LYS B . n B 1 92 ALA 92 72 72 ALA ALA B . n B 1 93 VAL 93 73 73 VAL VAL B . n B 1 94 ASP 94 74 74 ASP ASP B . n B 1 95 TRP 95 75 75 TRP TRP B . n B 1 96 LEU 96 76 76 LEU LEU B . n B 1 97 ILE 97 77 77 ILE ILE B . n B 1 98 LYS 98 78 78 LYS LYS B . n B 1 99 LYS 99 79 79 LYS LYS B . n B 1 100 ALA 100 80 80 ALA ALA B . n B 1 101 LYS 101 81 81 LYS LYS B . n B 1 102 THR 102 82 82 THR THR B . n B 1 103 ALA 103 83 83 ALA ALA B . n B 1 104 ILE 104 84 84 ILE ILE B . n B 1 105 ASP 105 85 85 ASP ASP B . n B 1 106 LYS 106 86 ? ? ? B . n B 1 107 LEU 107 87 ? ? ? B . n C 2 1 DA 1 1 1 DA DA C . n C 2 2 DT 2 2 2 DT DT C . n C 2 3 DG 3 3 3 DG DG C . n C 2 4 DT 4 4 4 DT DT C . n C 2 5 DG 5 5 5 DG DG C . n C 2 6 DG 6 6 6 DG DG C . n C 2 7 DT 7 7 7 DT DT C . n C 2 8 DC 8 8 8 DC DC C . n C 2 9 DC 9 9 9 DC DC C . n C 2 10 DC 10 10 10 DC DC C . n C 2 11 DC 11 11 11 DC DC C . n C 2 12 DC 12 12 12 DC DC C . n D 3 1 DT 1 1 1 DT DT D . n D 3 2 DG 2 2 2 DG DG D . n D 3 3 DG 3 3 3 DG DG D . n D 3 4 DG 4 4 4 DG DG D . n D 3 5 DG 5 5 5 DG DG D . n D 3 6 DG 6 6 6 DG DG D . n D 3 7 DA 7 7 7 DA DA D . n D 3 8 DC 8 8 8 DC DC D . n D 3 9 DC 9 9 9 DC DC D . n D 3 10 DA 10 10 10 DA DA D . n D 3 11 DC 11 11 11 DC DC D . n D 3 12 DA 12 12 12 DA DA D . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email xdsu@pku.edu.cn _pdbx_contact_author.name_first Xiaodong _pdbx_contact_author.name_last Su _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-6948-2317 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8300 ? 1 MORE -52 ? 1 'SSA (A^2)' 9250 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2022-10-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 0.6027 _pdbx_refine_tls.origin_y 23.5675 _pdbx_refine_tls.origin_z 4.5119 _pdbx_refine_tls.T[1][1] 0.0905 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0292 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0925 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.3343 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0673 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.2216 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 1.7130 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.8467 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.2001 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.4041 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.2308 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 1.3605 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0433 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0936 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0753 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0032 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0140 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0625 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.1640 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.0375 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0058 _pdbx_refine_tls.S[3][3]_esd ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 21 ? ? ? A 86 ? ? all 2 'X-RAY DIFFRACTION' 1 ? ? B 32 ? ? ? B 85 ? ? all 3 'X-RAY DIFFRACTION' 1 ? ? C 1 ? ? ? C 12 ? ? all 4 'X-RAY DIFFRACTION' 1 ? ? D 1 ? ? ? D 12 ? ? all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11.1_2575 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXCD ? ? ? . 4 # _pdbx_entry_details.entry_id 7VP1 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DT 4 ? ? "C3'" C DT 4 ? ? 1.380 1.419 -0.039 0.006 N 2 1 "O3'" D DG 4 ? ? "C3'" D DG 4 ? ? 1.382 1.419 -0.037 0.006 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 79 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -88.95 _pdbx_validate_torsion.psi 37.58 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 25 ? CG ? A ARG 45 CG 2 1 Y 1 A ARG 25 ? CD ? A ARG 45 CD 3 1 Y 1 A ARG 25 ? NE ? A ARG 45 NE 4 1 Y 1 A ARG 25 ? CZ ? A ARG 45 CZ 5 1 Y 1 A ARG 25 ? NH1 ? A ARG 45 NH1 6 1 Y 1 A ARG 25 ? NH2 ? A ARG 45 NH2 7 1 Y 1 A ARG 29 ? CG ? A ARG 49 CG 8 1 Y 1 A ARG 29 ? CD ? A ARG 49 CD 9 1 Y 1 A ARG 29 ? NE ? A ARG 49 NE 10 1 Y 1 A ARG 29 ? CZ ? A ARG 49 CZ 11 1 Y 1 A ARG 29 ? NH1 ? A ARG 49 NH1 12 1 Y 1 A ARG 29 ? NH2 ? A ARG 49 NH2 13 1 Y 1 A LYS 30 ? CG ? A LYS 50 CG 14 1 Y 1 A LYS 30 ? CD ? A LYS 50 CD 15 1 Y 1 A LYS 30 ? CE ? A LYS 50 CE 16 1 Y 1 A LYS 30 ? NZ ? A LYS 50 NZ 17 1 Y 1 A LYS 81 ? CG ? A LYS 101 CG 18 1 Y 1 A LYS 81 ? CD ? A LYS 101 CD 19 1 Y 1 A LYS 81 ? CE ? A LYS 101 CE 20 1 Y 1 A LYS 81 ? NZ ? A LYS 101 NZ 21 1 Y 1 A LYS 86 ? CG ? A LYS 106 CG 22 1 Y 1 A LYS 86 ? CD ? A LYS 106 CD 23 1 Y 1 A LYS 86 ? CE ? A LYS 106 CE 24 1 Y 1 A LYS 86 ? NZ ? A LYS 106 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -19 ? A MSE 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 20 1 Y 1 A HIS 0 ? A HIS 20 21 1 Y 1 A MSE 1 ? A MSE 21 22 1 Y 1 A GLY 2 ? A GLY 22 23 1 Y 1 A LEU 3 ? A LEU 23 24 1 Y 1 A LYS 4 ? A LYS 24 25 1 Y 1 A GLY 5 ? A GLY 25 26 1 Y 1 A TYR 6 ? A TYR 26 27 1 Y 1 A SER 7 ? A SER 27 28 1 Y 1 A VAL 8 ? A VAL 28 29 1 Y 1 A GLY 9 ? A GLY 29 30 1 Y 1 A GLU 10 ? A GLU 30 31 1 Y 1 A GLY 11 ? A GLY 31 32 1 Y 1 A GLY 12 ? A GLY 32 33 1 Y 1 A GLY 13 ? A GLY 33 34 1 Y 1 A GLU 14 ? A GLU 34 35 1 Y 1 A ILE 15 ? A ILE 35 36 1 Y 1 A VAL 16 ? A VAL 36 37 1 Y 1 A GLU 17 ? A GLU 37 38 1 Y 1 A VAL 18 ? A VAL 38 39 1 Y 1 A GLN 19 ? A GLN 39 40 1 Y 1 A GLY 20 ? A GLY 40 41 1 Y 1 A GLY 28 ? A GLY 48 42 1 Y 1 A LEU 87 ? A LEU 107 43 1 Y 1 B MSE -19 ? B MSE 1 44 1 Y 1 B GLY -18 ? B GLY 2 45 1 Y 1 B SER -17 ? B SER 3 46 1 Y 1 B SER -16 ? B SER 4 47 1 Y 1 B HIS -15 ? B HIS 5 48 1 Y 1 B HIS -14 ? B HIS 6 49 1 Y 1 B HIS -13 ? B HIS 7 50 1 Y 1 B HIS -12 ? B HIS 8 51 1 Y 1 B HIS -11 ? B HIS 9 52 1 Y 1 B HIS -10 ? B HIS 10 53 1 Y 1 B SER -9 ? B SER 11 54 1 Y 1 B SER -8 ? B SER 12 55 1 Y 1 B GLY -7 ? B GLY 13 56 1 Y 1 B LEU -6 ? B LEU 14 57 1 Y 1 B VAL -5 ? B VAL 15 58 1 Y 1 B PRO -4 ? B PRO 16 59 1 Y 1 B ARG -3 ? B ARG 17 60 1 Y 1 B GLY -2 ? B GLY 18 61 1 Y 1 B SER -1 ? B SER 19 62 1 Y 1 B HIS 0 ? B HIS 20 63 1 Y 1 B MSE 1 ? B MSE 21 64 1 Y 1 B GLY 2 ? B GLY 22 65 1 Y 1 B LEU 3 ? B LEU 23 66 1 Y 1 B LYS 4 ? B LYS 24 67 1 Y 1 B GLY 5 ? B GLY 25 68 1 Y 1 B TYR 6 ? B TYR 26 69 1 Y 1 B SER 7 ? B SER 27 70 1 Y 1 B VAL 8 ? B VAL 28 71 1 Y 1 B GLY 9 ? B GLY 29 72 1 Y 1 B GLU 10 ? B GLU 30 73 1 Y 1 B GLY 11 ? B GLY 31 74 1 Y 1 B GLY 12 ? B GLY 32 75 1 Y 1 B GLY 13 ? B GLY 33 76 1 Y 1 B GLU 14 ? B GLU 34 77 1 Y 1 B ILE 15 ? B ILE 35 78 1 Y 1 B VAL 16 ? B VAL 36 79 1 Y 1 B GLU 17 ? B GLU 37 80 1 Y 1 B VAL 18 ? B VAL 38 81 1 Y 1 B GLN 19 ? B GLN 39 82 1 Y 1 B GLY 20 ? B GLY 40 83 1 Y 1 B GLY 21 ? B GLY 41 84 1 Y 1 B HIS 22 ? B HIS 42 85 1 Y 1 B ILE 23 ? B ILE 43 86 1 Y 1 B ILE 24 ? B ILE 44 87 1 Y 1 B ARG 25 ? B ARG 45 88 1 Y 1 B ALA 26 ? B ALA 46 89 1 Y 1 B THR 27 ? B THR 47 90 1 Y 1 B GLY 28 ? B GLY 48 91 1 Y 1 B ARG 29 ? B ARG 49 92 1 Y 1 B LYS 30 ? B LYS 50 93 1 Y 1 B ASP 31 ? B ASP 51 94 1 Y 1 B LYS 86 ? B LYS 106 95 1 Y 1 B LEU 87 ? B LEU 107 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7VP1 'double helix' 7VP1 'a-form double helix' 7VP1 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DT 2 1_555 D DA 12 1_555 0.104 -0.168 -0.042 2.305 -2.357 9.087 1 C_DT2:DA12_D C 2 ? D 12 ? 20 1 1 C DG 3 1_555 D DC 11 1_555 -0.407 -0.066 0.588 -3.411 -13.508 1.272 2 C_DG3:DC11_D C 3 ? D 11 ? 19 1 1 C DT 4 1_555 D DA 10 1_555 -0.306 0.042 0.654 -13.602 -21.256 9.038 3 C_DT4:DA10_D C 4 ? D 10 ? 20 1 1 C DG 5 1_555 D DC 9 1_555 -0.492 -0.302 0.252 -1.202 -0.189 -4.919 4 C_DG5:DC9_D C 5 ? D 9 ? 19 1 1 C DG 6 1_555 D DC 8 1_555 0.156 -0.151 0.057 3.237 -10.851 -2.341 5 C_DG6:DC8_D C 6 ? D 8 ? 19 1 1 C DT 7 1_555 D DA 7 1_555 -0.307 -0.164 0.132 4.103 -14.443 2.443 6 C_DT7:DA7_D C 7 ? D 7 ? 20 1 1 C DC 8 1_555 D DG 6 1_555 1.419 -0.370 0.797 -15.542 -10.145 2.402 7 C_DC8:DG6_D C 8 ? D 6 ? 19 1 1 C DC 9 1_555 D DG 5 1_555 0.204 -0.060 -0.185 0.971 -8.143 -9.714 8 C_DC9:DG5_D C 9 ? D 5 ? 19 1 1 C DC 10 1_555 D DG 4 1_555 0.349 -0.065 0.485 -8.751 -6.252 3.174 9 C_DC10:DG4_D C 10 ? D 4 ? 19 1 1 C DC 11 1_555 D DG 3 1_555 0.337 -0.212 0.582 -0.385 -13.388 -2.805 10 C_DC11:DG3_D C 11 ? D 3 ? 19 1 1 C DC 12 1_555 D DG 2 1_555 0.217 -0.089 -0.173 15.656 -13.826 0.147 11 C_DC12:DG2_D C 12 ? D 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DT 2 1_555 D DA 12 1_555 C DG 3 1_555 D DC 11 1_555 0.113 -0.805 3.344 -4.684 -1.052 31.862 -1.259 -1.059 3.318 -1.902 8.472 32.213 1 CC_DT2DG3:DC11DA12_DD C 2 ? D 12 ? C 3 ? D 11 ? 1 C DG 3 1_555 D DC 11 1_555 C DT 4 1_555 D DA 10 1_555 -0.066 -1.210 3.448 4.126 3.614 36.402 -2.426 0.685 3.290 5.745 -6.558 36.799 2 CC_DG3DT4:DA10DC11_DD C 3 ? D 11 ? C 4 ? D 10 ? 1 C DT 4 1_555 D DA 10 1_555 C DG 5 1_555 D DC 9 1_555 -0.699 -0.265 3.076 3.603 7.774 29.150 -1.941 2.000 2.809 15.041 -6.971 30.357 3 CC_DT4DG5:DC9DA10_DD C 4 ? D 10 ? C 5 ? D 9 ? 1 C DG 5 1_555 D DC 9 1_555 C DG 6 1_555 D DC 8 1_555 1.122 -0.367 3.181 4.648 6.052 35.464 -1.427 -1.160 3.194 9.795 -7.523 36.250 4 CC_DG5DG6:DC8DC9_DD C 5 ? D 9 ? C 6 ? D 8 ? 1 C DG 6 1_555 D DC 8 1_555 C DT 7 1_555 D DA 7 1_555 0.419 -1.077 3.204 1.731 3.813 27.409 -3.134 -0.473 3.049 7.987 -3.626 27.721 5 CC_DG6DT7:DA7DC8_DD C 6 ? D 8 ? C 7 ? D 7 ? 1 C DT 7 1_555 D DA 7 1_555 C DC 8 1_555 D DG 6 1_555 -0.592 -0.279 3.849 -7.225 -5.148 49.443 0.113 0.077 3.902 -6.098 8.558 50.183 6 CC_DT7DC8:DG6DA7_DD C 7 ? D 7 ? C 8 ? D 6 ? 1 C DC 8 1_555 D DG 6 1_555 C DC 9 1_555 D DG 5 1_555 -0.457 -0.656 2.769 9.611 4.579 22.144 -2.676 3.452 2.204 11.133 -23.366 24.542 7 CC_DC8DC9:DG5DG6_DD C 8 ? D 6 ? C 9 ? D 5 ? 1 C DC 9 1_555 D DG 5 1_555 C DC 10 1_555 D DG 4 1_555 1.262 -0.951 3.508 -2.577 1.371 39.808 -1.561 -2.162 3.390 2.010 3.779 39.910 8 CC_DC9DC10:DG4DG5_DD C 9 ? D 5 ? C 10 ? D 4 ? 1 C DC 10 1_555 D DG 4 1_555 C DC 11 1_555 D DG 3 1_555 -0.540 -1.168 3.185 -3.604 0.497 31.959 -2.195 0.343 3.207 0.899 6.519 32.160 9 CC_DC10DC11:DG3DG4_DD C 10 ? D 4 ? C 11 ? D 3 ? 1 C DC 11 1_555 D DG 3 1_555 C DC 12 1_555 D DG 2 1_555 -0.747 -1.968 2.870 2.168 6.625 26.267 -5.518 2.024 2.247 14.262 -4.668 27.161 10 CC_DC11DC12:DG2DG3_DD C 11 ? D 3 ? C 12 ? D 2 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Science Foundation (NSF, China)' China 31670740 1 'National Science Foundation (NSF, China)' China 31270803 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #