HEADER TRANSFERASE/TRANSFERASE INHIBITOR 22-OCT-21 7VRE TITLE THE CRYSTAL STRUCTURE OF EGFR T790M/C797S WITH THE INHIBITOR HCD2892 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 5 ERBB-1; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS EGFR, INHIBITOR, COMPLEX, TRANSFERASE, TRANSFERASE-TRANSFERASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.J.ZHU REVDAT 2 29-NOV-23 7VRE 1 REMARK REVDAT 1 08-JUN-22 7VRE 0 JRNL AUTH H.CHEN,M.LAI,T.ZHANG,Y.CHEN,L.TONG,S.ZHU,Y.ZHOU,X.REN, JRNL AUTH 2 J.DING,H.XIE,X.LU,K.DING JRNL TITL CONFORMATIONAL CONSTRAINED JRNL TITL 2 4-(1-SULFONYL-3-INDOL)YL-2-PHENYLAMINOPYRIMIDINE DERIVATIVES JRNL TITL 3 AS NEW FOURTH-GENERATION EPIDERMAL GROWTH FACTOR RECEPTOR JRNL TITL 4 INHIBITORS TARGETING T790M/C797S MUTATIONS. JRNL REF J.MED.CHEM. V. 65 6840 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 35446588 JRNL DOI 10.1021/ACS.JMEDCHEM.2C00168 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1809 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.8530 - 5.8743 0.99 1298 148 0.1716 0.2068 REMARK 3 2 5.8743 - 4.6716 1.00 1268 139 0.1921 0.2353 REMARK 3 3 4.6716 - 4.0837 1.00 1240 139 0.1685 0.1983 REMARK 3 4 4.0837 - 3.7115 1.00 1259 140 0.1867 0.2433 REMARK 3 5 3.7115 - 3.4461 1.00 1238 136 0.2041 0.2398 REMARK 3 6 3.4461 - 3.2433 1.00 1227 137 0.2206 0.2601 REMARK 3 7 3.2433 - 3.0812 1.00 1254 144 0.2331 0.2759 REMARK 3 8 3.0812 - 2.9473 1.00 1220 140 0.2333 0.2587 REMARK 3 9 2.9473 - 2.8339 1.00 1234 137 0.2376 0.2995 REMARK 3 10 2.8339 - 2.7363 1.00 1241 139 0.2735 0.3756 REMARK 3 11 2.7363 - 2.6508 1.00 1216 134 0.2585 0.3233 REMARK 3 12 2.6508 - 2.5751 1.00 1231 137 0.2586 0.3148 REMARK 3 13 2.5751 - 2.5074 1.00 1266 139 0.2531 0.3095 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VRE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300025248. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 300K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18001 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6J6R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 8.5, 40% PEG 400, 0.15 REMARK 280 M NACL, 5 MM TRIS(2-CARBOXYETHYL)-PHOSPHINE (TCEP), VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.12300 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 73.12300 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 73.12300 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 73.12300 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 73.12300 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 73.12300 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 73.12300 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 73.12300 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 73.12300 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 73.12300 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 73.12300 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 73.12300 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 73.12300 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 73.12300 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 73.12300 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 73.12300 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 73.12300 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 73.12300 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 73.12300 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 73.12300 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 73.12300 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 73.12300 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 73.12300 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 73.12300 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 73.12300 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 73.12300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 692 REMARK 465 ALA A 693 REMARK 465 MET A 694 REMARK 465 GLY A 695 REMARK 465 GLU A 749 REMARK 465 ALA A 750 REMARK 465 THR A 751 REMARK 465 ALA A 867 REMARK 465 GLU A 868 REMARK 465 TYR A 869 REMARK 465 HIS A 870 REMARK 465 ALA A 871 REMARK 465 GLU A 872 REMARK 465 GLY A 873 REMARK 465 GLY A 874 REMARK 465 PRO A 1019 REMARK 465 GLN A 1020 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 697 CD OE1 OE2 REMARK 470 ARG A 748 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 754 CG CD CE NZ REMARK 470 LYS A 875 CE NZ REMARK 470 GLN A 982 CG CD OE1 NE2 REMARK 470 GLU A 985 CG CD OE1 OE2 REMARK 470 ARG A 986 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 988 CG ND1 CD2 CE1 NE2 REMARK 470 SER A 991 OG REMARK 470 THR A 993 OG1 CG2 REMARK 470 ARG A 999 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1005 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 709 CD REMARK 480 PHE A 723 N CA REMARK 480 GLU A 758 CD REMARK 480 GLU A 804 CD REMARK 480 ARG A 832 CZ REMARK 480 GLU A 922 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 836 -3.83 76.97 REMARK 500 ASP A 855 74.80 56.81 REMARK 500 REMARK 500 REMARK: NULL DBREF 7VRE A 696 1022 UNP P00533 EGFR_HUMAN 696 1022 SEQADV 7VRE GLY A 692 UNP P00533 EXPRESSION TAG SEQADV 7VRE ALA A 693 UNP P00533 EXPRESSION TAG SEQADV 7VRE MET A 694 UNP P00533 EXPRESSION TAG SEQADV 7VRE GLY A 695 UNP P00533 EXPRESSION TAG SEQADV 7VRE MET A 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 7VRE SER A 797 UNP P00533 CYS 797 ENGINEERED MUTATION SEQADV 7VRE ALA A 865 UNP P00533 GLU 865 CONFLICT SEQADV 7VRE ALA A 866 UNP P00533 GLU 866 CONFLICT SEQADV 7VRE ALA A 867 UNP P00533 LYS 867 CONFLICT SEQRES 1 A 331 GLY ALA MET GLY GLY GLU ALA PRO ASN GLN ALA LEU LEU SEQRES 2 A 331 ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL SEQRES 3 A 331 LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU SEQRES 4 A 331 TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA SEQRES 5 A 331 ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN SEQRES 6 A 331 LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL SEQRES 7 A 331 ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU SEQRES 8 A 331 THR SER THR VAL GLN LEU ILE MET GLN LEU MET PRO PHE SEQRES 9 A 331 GLY SER LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN SEQRES 10 A 331 ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE SEQRES 11 A 331 ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL SEQRES 12 A 331 HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR SEQRES 13 A 331 PRO GLN HIS VAL LYS ILE THR ASP PHE GLY LEU ALA LYS SEQRES 14 A 331 LEU LEU GLY ALA ALA ALA ALA GLU TYR HIS ALA GLU GLY SEQRES 15 A 331 GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE SEQRES 16 A 331 LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER SEQRES 17 A 331 TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER SEQRES 18 A 331 LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER SEQRES 19 A 331 ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE SEQRES 20 A 331 CYS THR ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP SEQRES 21 A 331 MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU SEQRES 22 A 331 ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG SEQRES 23 A 331 TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SEQRES 24 A 331 SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP SEQRES 25 A 331 GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR SEQRES 26 A 331 LEU ILE PRO GLN GLN GLY HET 7VH A1101 44 HETNAM 7VH 5-CHLORANYL-N-[5-CHLORANYL-2-METHOXY-4-[4-(4- HETNAM 2 7VH METHYLPIPERAZIN-1-YL)PIPERIDIN-1-YL]PHENYL]-4-(1- HETNAM 3 7VH ETHYLSULFONYLINDOL-3-YL)PYRIMIDIN-2-AMINE FORMUL 2 7VH C31 H37 CL2 N7 O3 S FORMUL 3 HOH *8(H2 O) HELIX 1 AA1 LYS A 708 THR A 710 5 3 HELIX 2 AA2 PRO A 753 ALA A 767 1 15 HELIX 3 AA3 SER A 797 HIS A 805 1 9 HELIX 4 AA4 LYS A 806 ILE A 809 5 4 HELIX 5 AA5 GLY A 810 ARG A 831 1 22 HELIX 6 AA6 ALA A 839 ARG A 841 5 3 HELIX 7 AA7 PRO A 877 MET A 881 5 5 HELIX 8 AA8 ALA A 882 ARG A 889 1 8 HELIX 9 AA9 THR A 892 THR A 909 1 18 HELIX 10 AB1 PRO A 919 GLY A 930 1 12 HELIX 11 AB2 THR A 940 TRP A 951 1 12 HELIX 12 AB3 ASP A 954 ARG A 958 5 5 HELIX 13 AB4 LYS A 960 ALA A 972 1 13 HELIX 14 AB5 ARG A 973 TYR A 978 5 6 HELIX 15 AB6 ASP A 994 ASP A 1003 1 10 HELIX 16 AB7 ASP A 1012 TYR A 1016 5 5 SHEET 1 AA1 5 PHE A 712 GLY A 721 0 SHEET 2 AA1 5 GLY A 724 TRP A 731 -1 O LYS A 728 N ILE A 715 SHEET 3 AA1 5 ILE A 740 GLU A 746 -1 O VAL A 742 N GLY A 729 SHEET 4 AA1 5 GLN A 787 GLN A 791 -1 O LEU A 788 N LYS A 745 SHEET 5 AA1 5 LEU A 777 CYS A 781 -1 N GLY A 779 O ILE A 789 SHEET 1 AA2 2 LEU A 833 VAL A 834 0 SHEET 2 AA2 2 LYS A 860 LEU A 861 -1 O LYS A 860 N VAL A 834 SHEET 1 AA3 2 VAL A 843 THR A 847 0 SHEET 2 AA3 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 CRYST1 146.246 146.246 146.246 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006838 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006838 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006838 0.00000 TER 2450 ILE A1018 HETATM 2451 C14 7VH A1101 -1.825 49.699 -13.129 1.00 82.12 C HETATM 2452 C11 7VH A1101 -0.395 51.106 -16.482 1.00 65.94 C HETATM 2453 C13 7VH A1101 -0.676 50.272 -13.982 1.00 76.54 C HETATM 2454 C02 7VH A1101 1.106 54.104 -23.224 1.00 56.59 C HETATM 2455 C03 7VH A1101 1.926 54.996 -22.514 1.00 58.65 C HETATM 2456 C05 7VH A1101 1.409 53.885 -20.584 1.00 56.32 C HETATM 2457 C07 7VH A1101 0.808 52.822 -18.297 1.00 59.86 C HETATM 2458 C08 7VH A1101 -0.467 52.304 -18.590 1.00 59.51 C HETATM 2459 C09 7VH A1101 -1.067 51.422 -17.658 1.00 62.17 C HETATM 2460 C15 7VH A1101 -2.111 48.304 -13.468 1.00 89.74 C HETATM 2461 C17 7VH A1101 -3.872 47.007 -13.085 1.00101.57 C HETATM 2462 C18 7VH A1101 -5.109 46.778 -12.205 1.00104.49 C HETATM 2463 C20 7VH A1101 -5.850 46.628 -10.167 1.00102.03 C HETATM 2464 C21 7VH A1101 -3.901 47.557 -10.423 1.00103.03 C HETATM 2465 C22 7VH A1101 -2.693 47.784 -11.347 1.00 99.78 C HETATM 2466 C23 7VH A1101 -2.391 48.120 -14.894 1.00 85.53 C HETATM 2467 C24 7VH A1101 -1.340 48.732 -15.828 1.00 80.49 C HETATM 2468 C25 7VH A1101 0.896 51.658 -16.194 1.00 65.51 C HETATM 2469 C26 7VH A1101 1.468 52.527 -17.136 1.00 62.06 C HETATM 2470 C28 7VH A1101 3.359 53.092 -15.723 1.00 59.58 C HETATM 2471 C30 7VH A1101 0.455 53.078 -22.525 1.00 56.31 C HETATM 2472 C31 7VH A1101 -0.540 52.043 -23.148 1.00 60.91 C HETATM 2473 C32 7VH A1101 -1.335 52.228 -24.263 1.00 63.82 C HETATM 2474 C36 7VH A1101 -4.868 50.838 -24.747 1.00 74.80 C HETATM 2475 C37 7VH A1101 -4.833 51.994 -23.694 1.00 62.77 C HETATM 2476 C39 7VH A1101 -1.815 50.208 -23.416 1.00 73.68 C HETATM 2477 C40 7VH A1101 -2.343 48.909 -23.155 1.00 67.68 C HETATM 2478 C41 7VH A1101 -1.876 48.205 -22.042 1.00 71.07 C HETATM 2479 C42 7VH A1101 -0.906 48.787 -21.197 1.00 69.25 C HETATM 2480 C43 7VH A1101 -0.385 50.059 -21.453 1.00 64.25 C HETATM 2481 C44 7VH A1101 -0.854 50.777 -22.587 1.00 65.34 C HETATM 2482 N04 7VH A1101 2.050 54.854 -21.200 1.00 56.43 N HETATM 2483 N06 7VH A1101 1.574 53.764 -19.164 1.00 56.42 N HETATM 2484 N12 7VH A1101 -1.012 50.192 -15.478 1.00 76.61 N HETATM 2485 N16 7VH A1101 -3.109 48.038 -12.625 1.00 99.67 N HETATM 2486 N19 7VH A1101 -4.783 46.622 -10.884 1.00105.85 N HETATM 2487 N29 7VH A1101 0.623 53.027 -21.237 1.00 57.10 N HETATM 2488 N33 7VH A1101 -2.087 51.090 -24.423 1.00 74.02 N HETATM 2489 O27 7VH A1101 2.741 53.156 -17.005 1.00 59.05 O HETATM 2490 O35 7VH A1101 -3.059 49.542 -26.310 1.00 81.84 O HETATM 2491 O38 7VH A1101 -3.213 51.773 -26.757 1.00 83.71 O HETATM 2492 S34 7VH A1101 -3.267 50.785 -25.641 1.00 77.64 S HETATM 2493 CL1 7VH A1101 0.945 54.280 -24.987 1.00 65.49 CL HETATM 2494 CL2 7VH A1101 -2.718 50.772 -18.069 1.00 70.34 CL HETATM 2495 O HOH A1201 -9.135 54.440 -31.675 1.00 54.83 O HETATM 2496 O HOH A1202 8.590 60.457 -22.035 1.00 53.43 O HETATM 2497 O HOH A1203 7.355 65.850 -45.141 1.00 70.14 O HETATM 2498 O HOH A1204 -18.956 47.379 -24.551 1.00 69.01 O HETATM 2499 O HOH A1205 3.945 63.516 -33.217 1.00 63.64 O HETATM 2500 O HOH A1206 -6.721 72.548 -18.679 1.00 67.32 O HETATM 2501 O HOH A1207 -1.969 71.111 -18.642 1.00 76.11 O HETATM 2502 O HOH A1208 -24.023 54.944 -10.418 1.00 68.51 O CONECT 2451 2453 2460 CONECT 2452 2459 2468 2484 CONECT 2453 2451 2484 CONECT 2454 2455 2471 2493 CONECT 2455 2454 2482 CONECT 2456 2482 2483 2487 CONECT 2457 2458 2469 2483 CONECT 2458 2457 2459 CONECT 2459 2452 2458 2494 CONECT 2460 2451 2466 2485 CONECT 2461 2462 2485 CONECT 2462 2461 2486 CONECT 2463 2486 CONECT 2464 2465 2486 CONECT 2465 2464 2485 CONECT 2466 2460 2467 CONECT 2467 2466 2484 CONECT 2468 2452 2469 CONECT 2469 2457 2468 2489 CONECT 2470 2489 CONECT 2471 2454 2472 2487 CONECT 2472 2471 2473 2481 CONECT 2473 2472 2488 CONECT 2474 2475 2492 CONECT 2475 2474 CONECT 2476 2477 2481 2488 CONECT 2477 2476 2478 CONECT 2478 2477 2479 CONECT 2479 2478 2480 CONECT 2480 2479 2481 CONECT 2481 2472 2476 2480 CONECT 2482 2455 2456 CONECT 2483 2456 2457 CONECT 2484 2452 2453 2467 CONECT 2485 2460 2461 2465 CONECT 2486 2462 2463 2464 CONECT 2487 2456 2471 CONECT 2488 2473 2476 2492 CONECT 2489 2469 2470 CONECT 2490 2492 CONECT 2491 2492 CONECT 2492 2474 2488 2490 2491 CONECT 2493 2454 CONECT 2494 2459 MASTER 356 0 1 16 9 0 0 6 2501 1 44 26 END