HEADER TRANSFERASE 09-NOV-21 7VW5 TITLE CRYSTAL STRUCTURES OF ALPHAVIRUS NONSTRUCTURAL PROTEIN 4 (NSP4) REVEAL TITLE 2 AN INTRINSICALLY DYNAMIC RNA-DEPENDENT RNA POLYMERASE FOLD COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE NSP4; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NON-STRUCTURAL PROTEIN 4,NSP4; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SINDBIS VIRUS; SOURCE 3 ORGANISM_TAXID: 11034; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: ROSETTA II; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PSUMO-LIC KEYWDS RNA DEPENDENT RNA POLYMERASE, RNA DIRECTED RNA POLYMERASE, RDRP, KEYWDS 2 ALPHAVIRUS, NSP4, NONSTRUCTURAL PROTEIN 4, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.B.TAN,D.LUO REVDAT 2 29-NOV-23 7VW5 1 REMARK REVDAT 1 16-FEB-22 7VW5 0 JRNL AUTH Y.B.TAN,L.S.LELLO,X.LIU,Y.S.LAW,C.KANG,J.LESCAR,J.ZHENG, JRNL AUTH 2 A.MERITS,D.LUO JRNL TITL CRYSTAL STRUCTURES OF ALPHAVIRUS NONSTRUCTURAL PROTEIN 4 JRNL TITL 2 (NSP4) REVEAL AN INTRINSICALLY DYNAMIC RNA-DEPENDENT RNA JRNL TITL 3 POLYMERASE FOLD. JRNL REF NUCLEIC ACIDS RES. V. 50 1000 2022 JRNL REFN ESSN 1362-4962 JRNL PMID 35037043 JRNL DOI 10.1093/NAR/GKAB1302 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.060 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 44676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.620 REMARK 3 FREE R VALUE TEST SET COUNT : 1169 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.2700 - 4.6000 0.97 5560 150 0.1744 0.1923 REMARK 3 2 4.6000 - 3.6500 0.90 5190 140 0.1665 0.2230 REMARK 3 3 3.6500 - 3.1900 0.93 5374 143 0.1994 0.2704 REMARK 3 4 3.1900 - 2.9000 0.97 5633 154 0.2107 0.2333 REMARK 3 5 2.9000 - 2.6900 0.96 5537 150 0.2100 0.2663 REMARK 3 6 2.6900 - 2.5300 0.93 5350 145 0.2238 0.2690 REMARK 3 7 2.5300 - 2.4000 0.95 5498 148 0.2293 0.2523 REMARK 3 8 2.4000 - 2.3000 0.94 5365 139 0.2568 0.3395 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.277 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.268 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 7405 REMARK 3 ANGLE : 0.437 10061 REMARK 3 CHIRALITY : 0.038 1176 REMARK 3 PLANARITY : 0.003 1302 REMARK 3 DIHEDRAL : 4.235 1006 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6580 28.4453 -6.3147 REMARK 3 T TENSOR REMARK 3 T11: 0.1830 T22: 0.1820 REMARK 3 T33: 0.1596 T12: 0.0123 REMARK 3 T13: -0.0001 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 0.3649 L22: 0.3505 REMARK 3 L33: 0.2732 L12: 0.0895 REMARK 3 L13: 0.0142 L23: -0.2459 REMARK 3 S TENSOR REMARK 3 S11: 0.0091 S12: -0.1504 S13: -0.0495 REMARK 3 S21: 0.0432 S22: -0.0124 S23: 0.1010 REMARK 3 S31: 0.0100 S32: 0.0080 S33: -0.0136 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 193 THROUGH 336 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2123 27.4355 8.2045 REMARK 3 T TENSOR REMARK 3 T11: 0.1907 T22: 0.2012 REMARK 3 T33: 0.1504 T12: 0.0028 REMARK 3 T13: -0.0102 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.5477 L22: 0.3680 REMARK 3 L33: 0.7393 L12: -0.2477 REMARK 3 L13: 0.1861 L23: -0.2357 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: -0.0110 S13: -0.0329 REMARK 3 S21: -0.0684 S22: 0.0077 S23: -0.0997 REMARK 3 S31: 0.2478 S32: 0.1226 S33: 0.0273 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 337 THROUGH 601 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3310 45.6986 8.7867 REMARK 3 T TENSOR REMARK 3 T11: 0.1346 T22: 0.1320 REMARK 3 T33: 0.0847 T12: 0.0147 REMARK 3 T13: -0.0121 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.9866 L22: 0.5211 REMARK 3 L33: 0.0301 L12: -0.5259 REMARK 3 L13: -0.0947 L23: -0.0441 REMARK 3 S TENSOR REMARK 3 S11: -0.0870 S12: -0.0616 S13: 0.0896 REMARK 3 S21: 0.0878 S22: 0.0809 S23: -0.0242 REMARK 3 S31: 0.0813 S32: 0.0116 S33: -0.0034 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9947 50.4455 -6.7672 REMARK 3 T TENSOR REMARK 3 T11: 0.2078 T22: 0.1676 REMARK 3 T33: 0.1259 T12: 0.0278 REMARK 3 T13: 0.0255 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.5894 L22: 0.3886 REMARK 3 L33: 0.3014 L12: -0.0955 REMARK 3 L13: 0.0368 L23: 0.2168 REMARK 3 S TENSOR REMARK 3 S11: 0.0147 S12: -0.0417 S13: -0.1049 REMARK 3 S21: -0.0728 S22: -0.0140 S23: -0.0517 REMARK 3 S31: -0.0755 S32: -0.0367 S33: 0.0415 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 214 THROUGH 336 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.8906 57.2809 -25.7276 REMARK 3 T TENSOR REMARK 3 T11: 0.1369 T22: 0.2150 REMARK 3 T33: 0.1954 T12: 0.0076 REMARK 3 T13: -0.0087 T23: 0.0654 REMARK 3 L TENSOR REMARK 3 L11: 0.5884 L22: 0.4508 REMARK 3 L33: 0.6946 L12: -0.2066 REMARK 3 L13: 0.3528 L23: 0.1155 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: -0.0124 S13: -0.0902 REMARK 3 S21: 0.0045 S22: 0.0435 S23: 0.0230 REMARK 3 S31: -0.1163 S32: -0.2219 S33: 0.1247 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 337 THROUGH 506 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0932 51.2291 -23.2594 REMARK 3 T TENSOR REMARK 3 T11: 0.1669 T22: 0.0978 REMARK 3 T33: 0.1246 T12: 0.0205 REMARK 3 T13: 0.0102 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.3697 L22: 0.3342 REMARK 3 L33: 0.5728 L12: -0.0474 REMARK 3 L13: 0.0739 L23: 0.0622 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: 0.0629 S13: -0.0296 REMARK 3 S21: 0.0114 S22: 0.0181 S23: -0.0708 REMARK 3 S31: 0.0441 S32: -0.0551 S33: 0.0104 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 507 THROUGH 602 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0115 25.1929 -23.8160 REMARK 3 T TENSOR REMARK 3 T11: 0.1035 T22: 0.0995 REMARK 3 T33: 0.1297 T12: 0.0049 REMARK 3 T13: -0.0174 T23: -0.0377 REMARK 3 L TENSOR REMARK 3 L11: 0.6064 L22: 0.6651 REMARK 3 L33: 0.5097 L12: -0.2437 REMARK 3 L13: 0.0672 L23: 0.0510 REMARK 3 S TENSOR REMARK 3 S11: 0.0758 S12: -0.0125 S13: -0.0461 REMARK 3 S21: -0.0970 S22: -0.0340 S23: 0.1637 REMARK 3 S31: -0.0952 S32: -0.0480 S33: 0.2209 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINED TO 2.3 ANGSTROM RESOLUTION TO REMARK 3 HAVE BEST VALUES OF MEAN I/SIGMA (LARGER THAN 2), DATA REMARK 3 COMPLETENESS (94%) AND OTHER PARAMETERS (R-FACTORS/CLASHSCORE/ REMARK 3 ETC.). REMARK 4 REMARK 4 7VW5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1300025519. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.946 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 144300 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 45.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.5 REMARK 200 DATA REDUNDANCY : 1.826 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.74 REMARK 200 R MERGE FOR SHELL (I) : 1.65800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7F0S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-20% PEG3350, 0.2 M MAGNESIUM REMARK 280 ACETATE, PH 7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 91 REMARK 465 ASP A 92 REMARK 465 GLN A 93 REMARK 465 PRO A 94 REMARK 465 GLU A 95 REMARK 465 CYS A 96 REMARK 465 TYR A 97 REMARK 465 LYS A 98 REMARK 465 ILE A 99 REMARK 465 THR A 100 REMARK 465 TYR A 101 REMARK 465 PRO A 102 REMARK 465 LYS A 103 REMARK 465 PRO A 165 REMARK 465 ALA A 166 REMARK 465 LYS A 167 REMARK 465 LEU A 168 REMARK 465 ARG A 169 REMARK 465 SER A 170 REMARK 465 TYR A 171 REMARK 465 PRO A 172 REMARK 465 LYS A 173 REMARK 465 LYS A 174 REMARK 465 HIS A 175 REMARK 465 GLU A 176 REMARK 465 TYR A 177 REMARK 465 ARG A 178 REMARK 465 MET A 289 REMARK 465 LYS A 290 REMARK 465 ARG A 291 REMARK 465 ASP A 292 REMARK 465 VAL A 293 REMARK 465 LYS A 294 REMARK 465 VAL A 295 REMARK 465 THR A 296 REMARK 465 PRO A 297 REMARK 465 GLY A 298 REMARK 465 THR A 299 REMARK 465 LYS A 300 REMARK 465 HIS A 301 REMARK 465 THR A 302 REMARK 465 GLU A 303 REMARK 465 GLU A 304 REMARK 465 ARG A 305 REMARK 465 PRO A 306 REMARK 465 LYS A 307 REMARK 465 VAL A 308 REMARK 465 ILE A 602 REMARK 465 LYS A 603 REMARK 465 HIS A 604 REMARK 465 LEU A 605 REMARK 465 TYR A 606 REMARK 465 GLY A 607 REMARK 465 GLY A 608 REMARK 465 PRO A 609 REMARK 465 LYS A 610 REMARK 465 THR B 91 REMARK 465 ASP B 92 REMARK 465 GLN B 93 REMARK 465 PRO B 94 REMARK 465 GLU B 95 REMARK 465 CYS B 96 REMARK 465 TYR B 97 REMARK 465 LYS B 98 REMARK 465 ILE B 99 REMARK 465 THR B 100 REMARK 465 TYR B 101 REMARK 465 PRO B 102 REMARK 465 LYS B 103 REMARK 465 PRO B 165 REMARK 465 ALA B 166 REMARK 465 LYS B 167 REMARK 465 LEU B 168 REMARK 465 ARG B 169 REMARK 465 SER B 170 REMARK 465 TYR B 171 REMARK 465 PRO B 172 REMARK 465 LYS B 173 REMARK 465 LYS B 174 REMARK 465 HIS B 175 REMARK 465 GLU B 176 REMARK 465 TYR B 177 REMARK 465 ARG B 178 REMARK 465 MET B 289 REMARK 465 LYS B 290 REMARK 465 ARG B 291 REMARK 465 ASP B 292 REMARK 465 VAL B 293 REMARK 465 LYS B 294 REMARK 465 VAL B 295 REMARK 465 THR B 296 REMARK 465 PRO B 297 REMARK 465 GLY B 298 REMARK 465 THR B 299 REMARK 465 LYS B 300 REMARK 465 HIS B 301 REMARK 465 THR B 302 REMARK 465 GLU B 303 REMARK 465 GLU B 304 REMARK 465 ARG B 305 REMARK 465 PRO B 306 REMARK 465 LYS B 307 REMARK 465 LYS B 603 REMARK 465 HIS B 604 REMARK 465 LEU B 605 REMARK 465 TYR B 606 REMARK 465 GLY B 607 REMARK 465 GLY B 608 REMARK 465 PRO B 609 REMARK 465 LYS B 610 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 152 63.80 64.41 REMARK 500 CYS A 206 -164.36 -100.42 REMARK 500 ALA A 314 54.89 -114.52 REMARK 500 LEU A 344 46.56 -97.14 REMARK 500 THR A 413 31.53 -97.98 REMARK 500 GLU A 451 -123.27 59.08 REMARK 500 ASN A 487 -150.81 56.83 REMARK 500 MET A 488 52.25 -91.24 REMARK 500 ASP B 152 61.01 63.30 REMARK 500 PHE B 163 46.26 -85.38 REMARK 500 ASP B 234 43.96 -109.07 REMARK 500 LEU B 344 49.08 -105.58 REMARK 500 GLU B 451 -126.04 62.54 REMARK 500 CYS B 459 119.53 -162.00 REMARK 500 GLU B 499 -78.55 -103.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 MG A 701 REMARK 615 MG B 701 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 392 OD1 REMARK 620 2 HOH A 829 O 78.3 REMARK 620 3 HOH A 842 O 87.9 85.2 REMARK 620 4 HOH A 867 O 84.5 84.5 168.3 REMARK 620 5 HOH A 885 O 100.3 168.2 106.6 83.7 REMARK 620 6 HOH A 955 O 165.7 88.1 95.3 89.9 92.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 392 OD1 REMARK 620 2 HOH B 810 O 77.0 REMARK 620 3 HOH B 826 O 81.7 70.6 REMARK 620 4 HOH B 922 O 113.7 96.7 158.0 REMARK 620 5 HOH B 942 O 104.8 161.4 91.1 99.3 REMARK 620 6 HOH B 960 O 155.8 86.8 76.1 85.5 85.2 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7F0S RELATED DB: PDB REMARK 900 SAME PUBLICATION REMARK 900 RELATED ID: 7VB4 RELATED DB: PDB REMARK 900 SAME PUBLICATION DBREF 7VW5 A 91 610 UNP P03317 POLN_SINDV 1994 2513 DBREF 7VW5 B 91 610 UNP P03317 POLN_SINDV 1994 2513 SEQADV 7VW5 SER A 164 UNP P03317 CYS 2067 ENGINEERED MUTATION SEQADV 7VW5 SER B 164 UNP P03317 CYS 2067 ENGINEERED MUTATION SEQRES 1 A 520 THR ASP GLN PRO GLU CYS TYR LYS ILE THR TYR PRO LYS SEQRES 2 A 520 PRO LEU TYR SER SER SER VAL PRO ALA ASN TYR SER ASP SEQRES 3 A 520 PRO GLN PHE ALA VAL ALA VAL CYS ASN ASN TYR LEU HIS SEQRES 4 A 520 GLU ASN TYR PRO THR VAL ALA SER TYR GLN ILE THR ASP SEQRES 5 A 520 GLU TYR ASP ALA TYR LEU ASP MET VAL ASP GLY THR VAL SEQRES 6 A 520 ALA CYS LEU ASP THR ALA THR PHE SER PRO ALA LYS LEU SEQRES 7 A 520 ARG SER TYR PRO LYS LYS HIS GLU TYR ARG ALA PRO ASN SEQRES 8 A 520 ILE ARG SER ALA VAL PRO SER ALA MET GLN ASN THR LEU SEQRES 9 A 520 GLN ASN VAL LEU ILE ALA ALA THR LYS ARG ASN CYS ASN SEQRES 10 A 520 VAL THR GLN MET ARG GLU LEU PRO THR LEU ASP SER ALA SEQRES 11 A 520 THR PHE ASN VAL GLU CYS PHE ARG LYS TYR ALA CYS ASN SEQRES 12 A 520 ASP GLU TYR TRP GLU GLU PHE ALA ARG LYS PRO ILE ARG SEQRES 13 A 520 ILE THR THR GLU PHE VAL THR ALA TYR VAL ALA ARG LEU SEQRES 14 A 520 LYS GLY PRO LYS ALA ALA ALA LEU PHE ALA LYS THR TYR SEQRES 15 A 520 ASN LEU VAL PRO LEU GLN GLU VAL PRO MET ASP ARG PHE SEQRES 16 A 520 VAL MET ASP MET LYS ARG ASP VAL LYS VAL THR PRO GLY SEQRES 17 A 520 THR LYS HIS THR GLU GLU ARG PRO LYS VAL GLN VAL ILE SEQRES 18 A 520 GLN ALA ALA GLU PRO LEU ALA THR ALA TYR LEU CYS GLY SEQRES 19 A 520 ILE HIS ARG GLU LEU VAL ARG ARG LEU THR ALA VAL LEU SEQRES 20 A 520 LEU PRO ASN ILE HIS THR LEU PHE ASP MET SER ALA GLU SEQRES 21 A 520 ASP PHE ASP ALA ILE ILE ALA GLU HIS PHE LYS GLN GLY SEQRES 22 A 520 ASP PRO VAL LEU GLU THR ASP ILE ALA SER PHE ASP LYS SEQRES 23 A 520 SER GLN ASP ASP ALA MET ALA LEU THR GLY LEU MET ILE SEQRES 24 A 520 LEU GLU ASP LEU GLY VAL ASP GLN PRO LEU LEU ASP LEU SEQRES 25 A 520 ILE GLU CYS ALA PHE GLY GLU ILE SER SER THR HIS LEU SEQRES 26 A 520 PRO THR GLY THR ARG PHE LYS PHE GLY ALA MET MET LYS SEQRES 27 A 520 SER GLY MET PHE LEU THR LEU PHE VAL ASN THR VAL LEU SEQRES 28 A 520 ASN VAL VAL ILE ALA SER ARG VAL LEU GLU GLU ARG LEU SEQRES 29 A 520 LYS THR SER ARG CYS ALA ALA PHE ILE GLY ASP ASP ASN SEQRES 30 A 520 ILE ILE HIS GLY VAL VAL SER ASP LYS GLU MET ALA GLU SEQRES 31 A 520 ARG CYS ALA THR TRP LEU ASN MET GLU VAL LYS ILE ILE SEQRES 32 A 520 ASP ALA VAL ILE GLY GLU ARG PRO PRO TYR PHE CYS GLY SEQRES 33 A 520 GLY PHE ILE LEU GLN ASP SER VAL THR SER THR ALA CYS SEQRES 34 A 520 ARG VAL ALA ASP PRO LEU LYS ARG LEU PHE LYS LEU GLY SEQRES 35 A 520 LYS PRO LEU PRO ALA ASP ASP GLU GLN ASP GLU ASP ARG SEQRES 36 A 520 ARG ARG ALA LEU LEU ASP GLU THR LYS ALA TRP PHE ARG SEQRES 37 A 520 VAL GLY ILE THR GLY THR LEU ALA VAL ALA VAL THR THR SEQRES 38 A 520 ARG TYR GLU VAL ASP ASN ILE THR PRO VAL LEU LEU ALA SEQRES 39 A 520 LEU ARG THR PHE ALA GLN SER LYS ARG ALA PHE GLN ALA SEQRES 40 A 520 ILE ARG GLY GLU ILE LYS HIS LEU TYR GLY GLY PRO LYS SEQRES 1 B 520 THR ASP GLN PRO GLU CYS TYR LYS ILE THR TYR PRO LYS SEQRES 2 B 520 PRO LEU TYR SER SER SER VAL PRO ALA ASN TYR SER ASP SEQRES 3 B 520 PRO GLN PHE ALA VAL ALA VAL CYS ASN ASN TYR LEU HIS SEQRES 4 B 520 GLU ASN TYR PRO THR VAL ALA SER TYR GLN ILE THR ASP SEQRES 5 B 520 GLU TYR ASP ALA TYR LEU ASP MET VAL ASP GLY THR VAL SEQRES 6 B 520 ALA CYS LEU ASP THR ALA THR PHE SER PRO ALA LYS LEU SEQRES 7 B 520 ARG SER TYR PRO LYS LYS HIS GLU TYR ARG ALA PRO ASN SEQRES 8 B 520 ILE ARG SER ALA VAL PRO SER ALA MET GLN ASN THR LEU SEQRES 9 B 520 GLN ASN VAL LEU ILE ALA ALA THR LYS ARG ASN CYS ASN SEQRES 10 B 520 VAL THR GLN MET ARG GLU LEU PRO THR LEU ASP SER ALA SEQRES 11 B 520 THR PHE ASN VAL GLU CYS PHE ARG LYS TYR ALA CYS ASN SEQRES 12 B 520 ASP GLU TYR TRP GLU GLU PHE ALA ARG LYS PRO ILE ARG SEQRES 13 B 520 ILE THR THR GLU PHE VAL THR ALA TYR VAL ALA ARG LEU SEQRES 14 B 520 LYS GLY PRO LYS ALA ALA ALA LEU PHE ALA LYS THR TYR SEQRES 15 B 520 ASN LEU VAL PRO LEU GLN GLU VAL PRO MET ASP ARG PHE SEQRES 16 B 520 VAL MET ASP MET LYS ARG ASP VAL LYS VAL THR PRO GLY SEQRES 17 B 520 THR LYS HIS THR GLU GLU ARG PRO LYS VAL GLN VAL ILE SEQRES 18 B 520 GLN ALA ALA GLU PRO LEU ALA THR ALA TYR LEU CYS GLY SEQRES 19 B 520 ILE HIS ARG GLU LEU VAL ARG ARG LEU THR ALA VAL LEU SEQRES 20 B 520 LEU PRO ASN ILE HIS THR LEU PHE ASP MET SER ALA GLU SEQRES 21 B 520 ASP PHE ASP ALA ILE ILE ALA GLU HIS PHE LYS GLN GLY SEQRES 22 B 520 ASP PRO VAL LEU GLU THR ASP ILE ALA SER PHE ASP LYS SEQRES 23 B 520 SER GLN ASP ASP ALA MET ALA LEU THR GLY LEU MET ILE SEQRES 24 B 520 LEU GLU ASP LEU GLY VAL ASP GLN PRO LEU LEU ASP LEU SEQRES 25 B 520 ILE GLU CYS ALA PHE GLY GLU ILE SER SER THR HIS LEU SEQRES 26 B 520 PRO THR GLY THR ARG PHE LYS PHE GLY ALA MET MET LYS SEQRES 27 B 520 SER GLY MET PHE LEU THR LEU PHE VAL ASN THR VAL LEU SEQRES 28 B 520 ASN VAL VAL ILE ALA SER ARG VAL LEU GLU GLU ARG LEU SEQRES 29 B 520 LYS THR SER ARG CYS ALA ALA PHE ILE GLY ASP ASP ASN SEQRES 30 B 520 ILE ILE HIS GLY VAL VAL SER ASP LYS GLU MET ALA GLU SEQRES 31 B 520 ARG CYS ALA THR TRP LEU ASN MET GLU VAL LYS ILE ILE SEQRES 32 B 520 ASP ALA VAL ILE GLY GLU ARG PRO PRO TYR PHE CYS GLY SEQRES 33 B 520 GLY PHE ILE LEU GLN ASP SER VAL THR SER THR ALA CYS SEQRES 34 B 520 ARG VAL ALA ASP PRO LEU LYS ARG LEU PHE LYS LEU GLY SEQRES 35 B 520 LYS PRO LEU PRO ALA ASP ASP GLU GLN ASP GLU ASP ARG SEQRES 36 B 520 ARG ARG ALA LEU LEU ASP GLU THR LYS ALA TRP PHE ARG SEQRES 37 B 520 VAL GLY ILE THR GLY THR LEU ALA VAL ALA VAL THR THR SEQRES 38 B 520 ARG TYR GLU VAL ASP ASN ILE THR PRO VAL LEU LEU ALA SEQRES 39 B 520 LEU ARG THR PHE ALA GLN SER LYS ARG ALA PHE GLN ALA SEQRES 40 B 520 ILE ARG GLY GLU ILE LYS HIS LEU TYR GLY GLY PRO LYS HET MG A 701 1 HET MG B 701 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *346(H2 O) HELIX 1 AA1 ASP A 116 ASN A 131 1 16 HELIX 2 AA2 TYR A 138 ASP A 152 1 15 HELIX 3 AA3 ASN A 192 CYS A 206 1 15 HELIX 4 AA4 GLU A 213 CYS A 232 1 20 HELIX 5 AA5 TYR A 236 LYS A 243 1 8 HELIX 6 AA6 THR A 248 GLY A 261 1 14 HELIX 7 AA7 GLY A 261 TYR A 272 1 12 HELIX 8 AA8 PRO A 281 PHE A 285 5 5 HELIX 9 AA9 ALA A 314 LEU A 337 1 24 HELIX 10 AB1 SER A 348 PHE A 360 1 13 HELIX 11 AB2 ASP A 375 GLN A 378 5 4 HELIX 12 AB3 ASP A 379 GLY A 394 1 16 HELIX 13 AB4 ASP A 396 SER A 411 1 16 HELIX 14 AB5 GLY A 424 GLU A 451 1 28 HELIX 15 AB6 GLU A 451 THR A 456 1 6 HELIX 16 AB7 ASP A 475 ASN A 487 1 13 HELIX 17 AB8 MET A 488 VAL A 490 5 3 HELIX 18 AB9 ASP A 523 GLY A 532 1 10 HELIX 19 AC1 ASP A 538 PHE A 557 1 20 HELIX 20 AC2 ILE A 561 GLU A 574 1 14 HELIX 21 AC3 ILE A 578 SER A 591 1 14 HELIX 22 AC4 SER A 591 GLY A 600 1 10 HELIX 23 AC5 ASP B 116 ASN B 131 1 16 HELIX 24 AC6 SER B 137 VAL B 151 1 15 HELIX 25 AC7 ASN B 192 LYS B 203 1 12 HELIX 26 AC8 ASN B 207 GLU B 213 1 7 HELIX 27 AC9 GLU B 213 CYS B 232 1 20 HELIX 28 AD1 TYR B 236 LYS B 243 1 8 HELIX 29 AD2 THR B 248 TYR B 272 1 25 HELIX 30 AD3 PRO B 281 ARG B 284 5 4 HELIX 31 AD4 ALA B 314 LEU B 337 1 24 HELIX 32 AD5 SER B 348 PHE B 360 1 13 HELIX 33 AD6 ASP B 375 GLN B 378 5 4 HELIX 34 AD7 ASP B 379 LEU B 393 1 15 HELIX 35 AD8 ASP B 396 SER B 412 1 17 HELIX 36 AD9 GLY B 424 GLU B 451 1 28 HELIX 37 AE1 GLU B 451 THR B 456 1 6 HELIX 38 AE2 ASP B 475 ASN B 487 1 13 HELIX 39 AE3 ASP B 523 LEU B 531 1 9 HELIX 40 AE4 ASP B 538 PHE B 557 1 20 HELIX 41 AE5 ILE B 561 GLU B 574 1 14 HELIX 42 AE6 ILE B 578 SER B 591 1 14 HELIX 43 AE7 SER B 591 GLN B 596 1 6 SHEET 1 AA1 5 ILE A 341 THR A 343 0 SHEET 2 AA1 5 ALA A 460 ILE A 463 1 O ALA A 460 N HIS A 342 SHEET 3 AA1 5 ASP A 466 HIS A 470 -1 O ASP A 466 N ILE A 463 SHEET 4 AA1 5 PRO A 365 ASP A 370 -1 N LEU A 367 O ILE A 469 SHEET 5 AA1 5 LYS A 491 VAL A 496 -1 O ALA A 495 N VAL A 366 SHEET 1 AA2 2 GLY A 507 GLN A 511 0 SHEET 2 AA2 2 ALA A 518 ALA A 522 -1 O VAL A 521 N PHE A 508 SHEET 1 AA3 2 VAL B 286 MET B 287 0 SHEET 2 AA3 2 GLN B 309 VAL B 310 -1 O GLN B 309 N MET B 287 SHEET 1 AA4 5 ILE B 341 THR B 343 0 SHEET 2 AA4 5 ALA B 460 ILE B 463 1 O ALA B 460 N HIS B 342 SHEET 3 AA4 5 ASP B 466 HIS B 470 -1 O ILE B 468 N ALA B 461 SHEET 4 AA4 5 PRO B 365 ASP B 370 -1 N LEU B 367 O ILE B 469 SHEET 5 AA4 5 LYS B 491 VAL B 496 -1 O ILE B 493 N GLU B 368 SHEET 1 AA5 2 GLY B 507 GLN B 511 0 SHEET 2 AA5 2 ALA B 518 ALA B 522 -1 O VAL B 521 N PHE B 508 LINK OD1 ASP A 392 MG MG A 701 1555 1555 2.09 LINK MG MG A 701 O HOH A 829 1555 1555 2.03 LINK MG MG A 701 O HOH A 842 1555 1555 2.02 LINK MG MG A 701 O HOH A 867 1555 1555 2.03 LINK MG MG A 701 O HOH A 885 1555 1555 2.02 LINK MG MG A 701 O HOH A 955 1555 1555 2.06 LINK OD1 ASP B 392 MG MG B 701 1555 1555 1.94 LINK MG MG B 701 O HOH B 810 1555 1555 2.03 LINK MG MG B 701 O HOH B 826 1555 1555 2.04 LINK MG MG B 701 O HOH B 922 1555 1555 1.99 LINK MG MG B 701 O HOH B 942 1555 1555 1.99 LINK MG MG B 701 O HOH B 960 1555 1555 2.00 CISPEP 1 TYR A 132 PRO A 133 0 4.81 CISPEP 2 LEU A 415 PRO A 416 0 -1.15 CISPEP 3 TYR B 132 PRO B 133 0 4.17 CISPEP 4 LEU B 415 PRO B 416 0 -0.97 CRYST1 67.450 68.940 71.420 116.31 107.05 95.10 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014826 0.001324 0.005976 0.00000 SCALE2 0.000000 0.014563 0.008249 0.00000 SCALE3 0.000000 0.000000 0.016832 0.00000