HEADER VIRAL PROTEIN 13-NOV-21 7VXX TITLE ZIKA VIRUS NS2B/NS3 PROTEASE BZIPRO(C143S) IN COMPLEX WITH 4-AMINO TITLE 2 BENZAMIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE PROTEASE SUBUNIT NS2B; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SERINE PROTEASE NS3; COMPND 7 CHAIN: B, D; COMPND 8 EC: 3.4.21.91,3.6.1.15,3.6.4.13; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 3 ORGANISM_TAXID: 64320; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 8 ORGANISM_TAXID: 64320; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ZIKV, NS2B/NS3 PROTEASE, INHIBITOR, COMPLEX, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.C.XIONG,F.CHENG,J.Y.ZHANG,H.X.SU,H.C.HU,Y.ZOU,M.J.LI,Y.C.XU REVDAT 2 29-NOV-23 7VXX 1 REMARK REVDAT 1 14-SEP-22 7VXX 0 JRNL AUTH Y.XIONG,F.CHENG,J.ZHANG,H.SU,H.HU,Y.ZOU,M.LI,Y.XU JRNL TITL STRUCTURE-BASED DESIGN OF A NOVEL INHIBITOR OF THE ZIKA JRNL TITL 2 VIRUS NS2B/NS3 PROTEASE. JRNL REF BIOORG.CHEM. V. 128 06109 2022 JRNL REFN ISSN 0045-2068 JRNL PMID 36049322 JRNL DOI 10.1016/J.BIOORG.2022.106109 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 30988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 1515 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8500 - 4.2100 1.00 2928 140 0.1969 0.1985 REMARK 3 2 4.2100 - 3.3500 1.00 2757 141 0.1854 0.2407 REMARK 3 3 3.3500 - 2.9300 1.00 2689 153 0.2057 0.2460 REMARK 3 4 2.9300 - 2.6600 1.00 2697 136 0.2176 0.2471 REMARK 3 5 2.6600 - 2.4700 1.00 2634 138 0.2258 0.2970 REMARK 3 6 2.4700 - 2.3300 1.00 2645 141 0.2157 0.2743 REMARK 3 7 2.3200 - 2.2100 1.00 2638 134 0.2023 0.2269 REMARK 3 8 2.2100 - 2.1100 1.00 2607 146 0.2085 0.2742 REMARK 3 9 2.1100 - 2.0300 1.00 2646 118 0.2198 0.2836 REMARK 3 10 2.0300 - 1.9600 1.00 2646 136 0.2283 0.3097 REMARK 3 11 1.9600 - 1.9000 1.00 2586 132 0.2391 0.2684 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -30.4042 16.1979 -26.8624 REMARK 3 T TENSOR REMARK 3 T11: 0.1978 T22: 0.1743 REMARK 3 T33: 0.1920 T12: 0.0021 REMARK 3 T13: -0.0260 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.4590 L22: 0.0208 REMARK 3 L33: 0.5892 L12: 0.0810 REMARK 3 L13: 0.4160 L23: 0.0424 REMARK 3 S TENSOR REMARK 3 S11: -0.0025 S12: 0.0452 S13: -0.0227 REMARK 3 S21: -0.0197 S22: 0.0089 S23: 0.0019 REMARK 3 S31: 0.0262 S32: 0.0441 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VXX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1300025610. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31118 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 19.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 23.90 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 24.50 REMARK 200 R MERGE FOR SHELL (I) : 1.59200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.17 REMARK 200 STARTING MODEL: 5LC0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 30% REMARK 280 POLYETHYLENE GLYCOL MONOMETHYL ETHER 2000, 0.1M SODIUM ACETATE REMARK 280 TRIHYDRATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.06350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.57450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.57450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 160.59525 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.57450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.57450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.53175 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.57450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.57450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 160.59525 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.57450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.57450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 53.53175 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 107.06350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 44 REMARK 465 THR A 45 REMARK 465 GLY A 46 REMARK 465 LYS A 47 REMARK 465 SER A 48 REMARK 465 VAL A 49 REMARK 465 ASP A 50 REMARK 465 ASP A 64 REMARK 465 GLU A 89 REMARK 465 ASP A 90 REMARK 465 GLY A 91 REMARK 465 PRO A 92 REMARK 465 PRO A 93 REMARK 465 MET A 94 REMARK 465 ARG A 95 REMARK 465 GLU A 96 REMARK 465 MET B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 LEU B 4 REMARK 465 TRP B 5 REMARK 465 ASP B 6 REMARK 465 VAL B 7 REMARK 465 PRO B 8 REMARK 465 ALA B 9 REMARK 465 PRO B 10 REMARK 465 LYS B 11 REMARK 465 GLU B 12 REMARK 465 VAL B 13 REMARK 465 LYS B 14 REMARK 465 LYS B 15 REMARK 465 GLY B 16 REMARK 465 GLU B 17 REMARK 465 ARG B 29 REMARK 465 LEU B 30 REMARK 465 LEU B 31 REMARK 465 GLY B 32 REMARK 465 LYS B 157 REMARK 465 ASN B 158 REMARK 465 LYS B 169 REMARK 465 ARG B 170 REMARK 465 GLU B 171 REMARK 465 GLU B 172 REMARK 465 GLU B 173 REMARK 465 THR B 174 REMARK 465 PRO B 175 REMARK 465 VAL B 176 REMARK 465 GLU B 177 REMARK 465 MET C 44 REMARK 465 THR C 45 REMARK 465 GLY C 46 REMARK 465 LYS C 47 REMARK 465 SER C 48 REMARK 465 VAL C 49 REMARK 465 ASP C 50 REMARK 465 GLU C 88 REMARK 465 GLU C 89 REMARK 465 ASP C 90 REMARK 465 GLY C 91 REMARK 465 PRO C 92 REMARK 465 PRO C 93 REMARK 465 MET C 94 REMARK 465 ARG C 95 REMARK 465 GLU C 96 REMARK 465 MET D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 465 HIS D -1 REMARK 465 HIS D 0 REMARK 465 SER D 1 REMARK 465 GLY D 2 REMARK 465 ALA D 3 REMARK 465 LEU D 4 REMARK 465 TRP D 5 REMARK 465 ASP D 6 REMARK 465 VAL D 7 REMARK 465 PRO D 8 REMARK 465 ALA D 9 REMARK 465 PRO D 10 REMARK 465 LYS D 11 REMARK 465 GLU D 12 REMARK 465 ARG D 29 REMARK 465 LEU D 30 REMARK 465 LEU D 31 REMARK 465 GLY D 32 REMARK 465 SER D 33 REMARK 465 GLY D 61 REMARK 465 GLU D 62 REMARK 465 GLY D 63 REMARK 465 GLU D 171 REMARK 465 GLU D 172 REMARK 465 GLU D 173 REMARK 465 THR D 174 REMARK 465 PRO D 175 REMARK 465 VAL D 176 REMARK 465 GLU D 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 GLU A 66 CG CD OE1 OE2 REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 80 CG CD OE1 OE2 REMARK 470 GLU A 88 CG CD OE1 OE2 REMARK 470 THR B 18 OG1 CG2 REMARK 470 ARG B 28 CG CD NE CZ NH1 NH2 REMARK 470 SER B 33 OG REMARK 470 LYS B 54 CG CD CE NZ REMARK 470 ARG B 59 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 62 CG CD OE1 OE2 REMARK 470 ARG B 64 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 105 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 117 CG CD CE NZ REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 ASP B 120 CG OD1 OD2 REMARK 470 LYS B 142 CG CD CE NZ REMARK 470 ARG B 145 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 156 CG1 CG2 CD1 REMARK 470 GLU C 54 CG CD OE1 OE2 REMARK 470 GLU C 62 CG CD OE1 OE2 REMARK 470 LYS C 63 CG CD CE NZ REMARK 470 ASP C 64 CG OD1 OD2 REMARK 470 GLU C 66 CG CD OE1 OE2 REMARK 470 ARG C 73 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 80 CG CD OE1 OE2 REMARK 470 VAL D 13 CG1 CG2 REMARK 470 THR D 18 OG1 CG2 REMARK 470 THR D 19 OG1 CG2 REMARK 470 THR D 27 OG1 CG2 REMARK 470 ARG D 28 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 54 CG CD CE NZ REMARK 470 ARG D 59 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 64 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 104 CG CD OE1 OE2 REMARK 470 ARG D 105 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 107 CG CD CE NZ REMARK 470 LYS D 117 CG CD CE NZ REMARK 470 LYS D 119 CG CD CE NZ REMARK 470 ASP D 120 CG OD1 OD2 REMARK 470 LYS D 142 CG CD CE NZ REMARK 470 LYS D 157 CG CD CE NZ REMARK 470 LYS D 169 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN C 70 -159.30 -93.93 REMARK 500 LEU D 92 -38.07 -137.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 109 DISTANCE = 7.56 ANGSTROMS DBREF 7VXX A 45 96 UNP H8XX12 H8XX12_ZIKV 1411 1462 DBREF 7VXX B 1 177 UNP H8XX12 H8XX12_ZIKV 1497 1673 DBREF 7VXX C 45 96 UNP H8XX12 H8XX12_ZIKV 1411 1462 DBREF 7VXX D 1 177 UNP H8XX12 H8XX12_ZIKV 1497 1673 SEQADV 7VXX MET A 44 UNP H8XX12 INITIATING METHIONINE SEQADV 7VXX MET B -6 UNP H8XX12 INITIATING METHIONINE SEQADV 7VXX HIS B -5 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS B -4 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS B -3 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS B -2 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS B -1 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS B 0 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX SER B 143 UNP H8XX12 CYS 1639 ENGINEERED MUTATION SEQADV 7VXX MET C 44 UNP H8XX12 INITIATING METHIONINE SEQADV 7VXX MET D -6 UNP H8XX12 INITIATING METHIONINE SEQADV 7VXX HIS D -5 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS D -4 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS D -3 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS D -2 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS D -1 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX HIS D 0 UNP H8XX12 EXPRESSION TAG SEQADV 7VXX SER D 143 UNP H8XX12 CYS 1639 ENGINEERED MUTATION SEQRES 1 A 53 MET THR GLY LYS SER VAL ASP MET TYR ILE GLU ARG ALA SEQRES 2 A 53 GLY ASP ILE THR TRP GLU LYS ASP ALA GLU VAL THR GLY SEQRES 3 A 53 ASN SER PRO ARG LEU ASP VAL ALA LEU ASP GLU SER GLY SEQRES 4 A 53 ASP PHE SER LEU VAL GLU GLU ASP GLY PRO PRO MET ARG SEQRES 5 A 53 GLU SEQRES 1 B 184 MET HIS HIS HIS HIS HIS HIS SER GLY ALA LEU TRP ASP SEQRES 2 B 184 VAL PRO ALA PRO LYS GLU VAL LYS LYS GLY GLU THR THR SEQRES 3 B 184 ASP GLY VAL TYR ARG VAL MET THR ARG ARG LEU LEU GLY SEQRES 4 B 184 SER THR GLN VAL GLY VAL GLY VAL MET GLN GLU GLY VAL SEQRES 5 B 184 PHE HIS THR MET TRP HIS VAL THR LYS GLY ALA ALA LEU SEQRES 6 B 184 ARG SER GLY GLU GLY ARG LEU ASP PRO TYR TRP GLY ASP SEQRES 7 B 184 VAL LYS GLN ASP LEU VAL SER TYR CYS GLY PRO TRP LYS SEQRES 8 B 184 LEU ASP ALA ALA TRP ASP GLY LEU SER GLU VAL GLN LEU SEQRES 9 B 184 LEU ALA VAL PRO PRO GLY GLU ARG ALA LYS ASN ILE GLN SEQRES 10 B 184 THR LEU PRO GLY ILE PHE LYS THR LYS ASP GLY ASP ILE SEQRES 11 B 184 GLY ALA VAL ALA LEU ASP TYR PRO ALA GLY THR SER GLY SEQRES 12 B 184 SER PRO ILE LEU ASP LYS SER GLY ARG VAL ILE GLY LEU SEQRES 13 B 184 TYR GLY ASN GLY VAL VAL ILE LYS ASN GLY SER TYR VAL SEQRES 14 B 184 SER ALA ILE THR GLN GLY LYS ARG GLU GLU GLU THR PRO SEQRES 15 B 184 VAL GLU SEQRES 1 C 53 MET THR GLY LYS SER VAL ASP MET TYR ILE GLU ARG ALA SEQRES 2 C 53 GLY ASP ILE THR TRP GLU LYS ASP ALA GLU VAL THR GLY SEQRES 3 C 53 ASN SER PRO ARG LEU ASP VAL ALA LEU ASP GLU SER GLY SEQRES 4 C 53 ASP PHE SER LEU VAL GLU GLU ASP GLY PRO PRO MET ARG SEQRES 5 C 53 GLU SEQRES 1 D 184 MET HIS HIS HIS HIS HIS HIS SER GLY ALA LEU TRP ASP SEQRES 2 D 184 VAL PRO ALA PRO LYS GLU VAL LYS LYS GLY GLU THR THR SEQRES 3 D 184 ASP GLY VAL TYR ARG VAL MET THR ARG ARG LEU LEU GLY SEQRES 4 D 184 SER THR GLN VAL GLY VAL GLY VAL MET GLN GLU GLY VAL SEQRES 5 D 184 PHE HIS THR MET TRP HIS VAL THR LYS GLY ALA ALA LEU SEQRES 6 D 184 ARG SER GLY GLU GLY ARG LEU ASP PRO TYR TRP GLY ASP SEQRES 7 D 184 VAL LYS GLN ASP LEU VAL SER TYR CYS GLY PRO TRP LYS SEQRES 8 D 184 LEU ASP ALA ALA TRP ASP GLY LEU SER GLU VAL GLN LEU SEQRES 9 D 184 LEU ALA VAL PRO PRO GLY GLU ARG ALA LYS ASN ILE GLN SEQRES 10 D 184 THR LEU PRO GLY ILE PHE LYS THR LYS ASP GLY ASP ILE SEQRES 11 D 184 GLY ALA VAL ALA LEU ASP TYR PRO ALA GLY THR SER GLY SEQRES 12 D 184 SER PRO ILE LEU ASP LYS SER GLY ARG VAL ILE GLY LEU SEQRES 13 D 184 TYR GLY ASN GLY VAL VAL ILE LYS ASN GLY SER TYR VAL SEQRES 14 D 184 SER ALA ILE THR GLN GLY LYS ARG GLU GLU GLU THR PRO SEQRES 15 D 184 VAL GLU HET PBZ D 201 10 HETNAM PBZ P-AMINO BENZAMIDINE FORMUL 5 PBZ C7 H10 N3 1+ FORMUL 6 HOH *54(H2 O) HELIX 1 AA1 TRP B 50 LYS B 54 1 5 HELIX 2 AA2 PRO B 131 SER B 135 5 5 HELIX 3 AA3 TRP D 50 LYS D 54 1 5 HELIX 4 AA4 PRO D 131 SER D 135 5 5 SHEET 1 AA1 6 TYR A 52 GLY A 57 0 SHEET 2 AA1 6 GLY B 21 THR B 27 -1 O MET B 26 N TYR A 52 SHEET 3 AA1 6 THR B 34 GLN B 42 -1 O GLY B 37 N VAL B 25 SHEET 4 AA1 6 VAL B 45 MET B 49 -1 O HIS B 47 N VAL B 40 SHEET 5 AA1 6 LEU B 76 TYR B 79 -1 O TYR B 79 N PHE B 46 SHEET 6 AA1 6 PRO B 67 ASP B 71 -1 N TYR B 68 O SER B 78 SHEET 1 AA2 5 GLU A 66 VAL A 67 0 SHEET 2 AA2 5 LYS B 107 THR B 111 1 O GLN B 110 N GLU A 66 SHEET 3 AA2 5 VAL B 95 ALA B 99 -1 N LEU B 97 O ILE B 109 SHEET 4 AA2 5 PRO B 138 LEU B 140 -1 O PRO B 138 N LEU B 98 SHEET 5 AA2 5 VAL B 146 LEU B 149 -1 O ILE B 147 N ILE B 139 SHEET 1 AA3 6 PHE A 84 LEU A 86 0 SHEET 2 AA3 6 ARG A 73 LEU A 78 -1 N ALA A 77 O SER A 85 SHEET 3 AA3 6 GLY B 114 THR B 118 1 O LYS B 117 N LEU A 74 SHEET 4 AA3 6 GLY B 121 VAL B 126 -1 O ILE B 123 N PHE B 116 SHEET 5 AA3 6 TYR B 161 ALA B 164 -1 O SER B 163 N VAL B 126 SHEET 6 AA3 6 GLY B 153 VAL B 155 -1 N VAL B 154 O VAL B 162 SHEET 1 AA4 2 LEU B 58 SER B 60 0 SHEET 2 AA4 2 GLY B 63 LEU B 65 -1 O LEU B 65 N LEU B 58 SHEET 1 AA5 6 TYR C 52 GLY C 57 0 SHEET 2 AA5 6 GLY D 21 MET D 26 -1 O ARG D 24 N GLU C 54 SHEET 3 AA5 6 GLN D 35 GLN D 42 -1 O MET D 41 N GLY D 21 SHEET 4 AA5 6 VAL D 45 MET D 49 -1 O HIS D 47 N VAL D 40 SHEET 5 AA5 6 LEU D 76 TYR D 79 -1 O VAL D 77 N THR D 48 SHEET 6 AA5 6 PRO D 67 ASP D 71 -1 N TYR D 68 O SER D 78 SHEET 1 AA6 5 GLU C 66 VAL C 67 0 SHEET 2 AA6 5 LYS D 107 THR D 111 1 O GLN D 110 N GLU C 66 SHEET 3 AA6 5 VAL D 95 ALA D 99 -1 N VAL D 95 O THR D 111 SHEET 4 AA6 5 PRO D 138 LEU D 140 -1 O PRO D 138 N LEU D 98 SHEET 5 AA6 5 VAL D 146 LEU D 149 -1 O GLY D 148 N ILE D 139 SHEET 1 AA7 6 PHE C 84 LEU C 86 0 SHEET 2 AA7 6 ARG C 73 LEU C 78 -1 N ALA C 77 O SER C 85 SHEET 3 AA7 6 GLY D 114 THR D 118 1 O LYS D 117 N LEU C 74 SHEET 4 AA7 6 GLY D 121 VAL D 126 -1 O ILE D 123 N PHE D 116 SHEET 5 AA7 6 TYR D 161 ALA D 164 -1 O SER D 163 N VAL D 126 SHEET 6 AA7 6 GLY D 153 VAL D 155 -1 N VAL D 154 O VAL D 162 CRYST1 59.149 59.149 214.127 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016906 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004670 0.00000