HEADER TRANSFERASE 30-NOV-21 7W5C TITLE CRYSTAL STRUCTURE OF MITOGEN ACTIVATED PROTEIN KINASE 4 (MPK4) FROM TITLE 2 ARABIDOPSIS THALIANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATMPK4,MAP KINASE 4; COMPND 5 EC: 2.7.11.24; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1; COMPND 9 CHAIN: Q; COMPND 10 SYNONYM: ATMKK1,MAP KINASE KINASE 1,ATMEK1,NMAPKK; COMPND 11 EC: 2.7.12.2; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: MPK4, AT4G01370, F2N1.1, F2N1_2-T; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 11 ORGANISM_COMMON: THALE CRESS; SOURCE 12 ORGANISM_TAXID: 3702 KEYWDS MPK4, KINASE, ATPASE, PLANT PROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.T.AROLD,U.F.S.HAMEED REVDAT 4 29-NOV-23 7W5C 1 REMARK REVDAT 3 12-JUL-23 7W5C 1 JRNL REVDAT 2 21-JUN-23 7W5C 1 JRNL REVDAT 1 07-DEC-22 7W5C 0 JRNL AUTH A.SIODMAK,U.F.SHAHUL HAMEED,N.RAYAPURAM,R.VOLZ,M.BOUDSOCQ, JRNL AUTH 2 S.ALHARBI,H.ALHORAIBI,Y.H.LEE,I.BLILOU,S.T.AROLD,H.HIRT JRNL TITL ESSENTIAL ROLE OF THE CD DOCKING MOTIF OF MPK4 IN PLANT JRNL TITL 2 IMMUNITY, GROWTH, AND DEVELOPMENT. JRNL REF NEW PHYTOL. V. 239 1112 2023 JRNL REFN ESSN 1469-8137 JRNL PMID 37243525 JRNL DOI 10.1111/NPH.18989 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19885 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6020 - 4.1989 1.00 2778 161 0.1618 0.1937 REMARK 3 2 4.1989 - 3.3381 1.00 2712 149 0.1466 0.1961 REMARK 3 3 3.3381 - 2.9177 1.00 2715 126 0.1736 0.2263 REMARK 3 4 2.9177 - 2.6517 1.00 2658 153 0.1758 0.2499 REMARK 3 5 2.6517 - 2.4620 1.00 2664 176 0.1967 0.2572 REMARK 3 6 2.4620 - 2.3171 1.00 2703 115 0.2258 0.3276 REMARK 3 7 2.3171 - 2.2012 0.99 2639 136 0.3291 0.3966 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3114 REMARK 3 ANGLE : 1.091 4232 REMARK 3 CHIRALITY : 0.062 469 REMARK 3 PLANARITY : 0.007 547 REMARK 3 DIHEDRAL : 16.180 1883 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 59.0841 38.5997 23.7900 REMARK 3 T TENSOR REMARK 3 T11: 0.1647 T22: 0.2212 REMARK 3 T33: 0.2338 T12: 0.0172 REMARK 3 T13: 0.0242 T23: 0.0509 REMARK 3 L TENSOR REMARK 3 L11: 0.8981 L22: 0.2766 REMARK 3 L33: 1.0636 L12: 0.0650 REMARK 3 L13: -0.5598 L23: -0.1425 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: -0.0081 S13: 0.0452 REMARK 3 S21: -0.0364 S22: -0.0650 S23: -0.0261 REMARK 3 S31: -0.0337 S32: 0.0898 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7W5C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300026019. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19910 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.201 REMARK 200 RESOLUTION RANGE LOW (A) : 19.602 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 23.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.9100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2ERK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2% V/V TACSIMATETM PH 7.0, 0.1 M HEPES REMARK 280 PH 7.5, 20% W/V POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 66.47500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 66.47500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 66.47500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 66.47500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 66.47500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 66.47500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 66.47500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 66.47500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 66.47500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 66.47500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 66.47500 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 66.47500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 66.47500 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 66.47500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 66.47500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 66.47500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 66.47500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 66.47500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 66.47500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 66.47500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 66.47500 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 66.47500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 66.47500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 66.47500 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 66.47500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 66.47500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 206 O HOH A 501 1.87 REMARK 500 O HOH A 509 O HOH A 537 1.96 REMARK 500 O HOH A 560 O HOH A 566 1.99 REMARK 500 OD2 ASP A 182 O HOH A 502 2.11 REMARK 500 O HOH A 557 O HOH A 569 2.14 REMARK 500 O HOH A 506 O HOH A 549 2.17 REMARK 500 OE2 GLU A 68 O HOH A 503 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 294 OG1 THR A 353 20545 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS Q 192 CD LYS Q 192 CE -0.178 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 240 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 LYS Q 192 CD - CE - NZ ANGL. DEV. = -22.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 116 74.49 -118.78 REMARK 500 THR A 129 -163.51 -170.09 REMARK 500 ARG A 168 -8.64 78.29 REMARK 500 ASP A 169 47.66 -141.26 REMARK 500 ASP A 187 64.26 63.40 REMARK 500 THR A 197 101.76 -45.07 REMARK 500 ASP A 334 109.98 -160.37 REMARK 500 LEU Q 191 -4.43 -165.12 REMARK 500 REMARK 500 REMARK: NULL DBREF 7W5C A 18 372 UNP Q39024 MPK4_ARATH 18 372 DBREF 7W5C Q 187 199 UNP Q94A06 M2K1_ARATH 187 199 SEQRES 1 A 355 GLY VAL ALA THR HIS GLY GLY SER TYR VAL GLN TYR ASN SEQRES 2 A 355 VAL TYR GLY ASN LEU PHE GLU VAL SER ARG LYS TYR VAL SEQRES 3 A 355 PRO PRO LEU ARG PRO ILE GLY ARG GLY ALA TYR GLY ILE SEQRES 4 A 355 VAL CYS ALA ALA THR ASN SER GLU THR GLY GLU GLU VAL SEQRES 5 A 355 ALA ILE LYS LYS ILE GLY ASN ALA PHE ASP ASN ILE ILE SEQRES 6 A 355 ASP ALA LYS ARG THR LEU ARG GLU ILE LYS LEU LEU LYS SEQRES 7 A 355 HIS MET ASP HIS GLU ASN VAL ILE ALA VAL LYS ASP ILE SEQRES 8 A 355 ILE LYS PRO PRO GLN ARG GLU ASN PHE ASN ASP VAL TYR SEQRES 9 A 355 ILE VAL TYR GLU LEU MET ASP THR ASP LEU HIS GLN ILE SEQRES 10 A 355 ILE ARG SER ASN GLN PRO LEU THR ASP ASP HIS CYS ARG SEQRES 11 A 355 PHE PHE LEU TYR GLN LEU LEU ARG GLY LEU LYS TYR VAL SEQRES 12 A 355 HIS SER ALA ASN VAL LEU HIS ARG ASP LEU LYS PRO SER SEQRES 13 A 355 ASN LEU LEU LEU ASN ALA ASN CYS ASP LEU LYS LEU GLY SEQRES 14 A 355 ASP PHE GLY LEU ALA ARG THR LYS SER GLU THR ASP PHE SEQRES 15 A 355 MET THR GLU TYR VAL VAL THR ARG TRP TYR ARG ALA PRO SEQRES 16 A 355 GLU LEU LEU LEU ASN CYS SER GLU TYR THR ALA ALA ILE SEQRES 17 A 355 ASP ILE TRP SER VAL GLY CYS ILE LEU GLY GLU THR MET SEQRES 18 A 355 THR ARG GLU PRO LEU PHE PRO GLY LYS ASP TYR VAL HIS SEQRES 19 A 355 GLN LEU ARG LEU ILE THR GLU LEU ILE GLY SER PRO ASP SEQRES 20 A 355 ASP SER SER LEU GLY PHE LEU ARG SER ASP ASN ALA ARG SEQRES 21 A 355 ARG TYR VAL ARG GLN LEU PRO GLN TYR PRO ARG GLN ASN SEQRES 22 A 355 PHE ALA ALA ARG PHE PRO ASN MET SER ALA GLY ALA VAL SEQRES 23 A 355 ASP LEU LEU GLU LYS MET LEU VAL PHE ASP PRO SER ARG SEQRES 24 A 355 ARG ILE THR VAL ASP GLU ALA LEU CYS HIS PRO TYR LEU SEQRES 25 A 355 ALA PRO LEU HIS ASP ILE ASN GLU GLU PRO VAL CYS VAL SEQRES 26 A 355 ARG PRO PHE ASN PHE ASP PHE GLU GLN PRO THR LEU THR SEQRES 27 A 355 GLU GLU ASN ILE LYS GLU LEU ILE TYR ARG GLU THR VAL SEQRES 28 A 355 LYS PHE ASN PRO SEQRES 1 Q 13 ILE HIS ARG ASP LEU LYS PRO SER ASN LEU LEU ILE ASN HET ANP A 401 31 HET MG A 402 1 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 3 ANP C10 H17 N6 O12 P3 FORMUL 4 MG MG 2+ FORMUL 5 HOH *76(H2 O) HELIX 1 AA1 HIS A 22 GLY A 24 5 3 HELIX 2 AA2 ASN A 80 MET A 97 1 18 HELIX 3 AA3 GLN A 113 PHE A 117 5 5 HELIX 4 AA4 LEU A 131 SER A 137 1 7 HELIX 5 AA5 THR A 142 ALA A 163 1 22 HELIX 6 AA6 LYS A 171 SER A 173 5 3 HELIX 7 AA7 ALA A 211 LEU A 216 1 6 HELIX 8 AA8 ALA A 223 ARG A 240 1 18 HELIX 9 AA9 ASP A 248 GLY A 261 1 14 HELIX 10 AB1 SER A 273 LEU A 283 1 11 HELIX 11 AB2 ASN A 290 PHE A 295 1 6 HELIX 12 AB3 SER A 299 LEU A 310 1 12 HELIX 13 AB4 ASP A 313 ARG A 317 5 5 HELIX 14 AB5 THR A 319 CYS A 325 1 7 HELIX 15 AB6 HIS A 326 ALA A 330 5 5 HELIX 16 AB7 ASP A 334 GLU A 338 5 5 HELIX 17 AB8 THR A 355 ASN A 371 1 17 SHEET 1 AA1 3 VAL A 19 THR A 21 0 SHEET 2 AA1 3 TYR A 26 VAL A 31 -1 O TYR A 26 N THR A 21 SHEET 3 AA1 3 ASN A 34 SER A 39 -1 O ASN A 34 N VAL A 31 SHEET 1 AA2 5 TYR A 42 ARG A 51 0 SHEET 2 AA2 5 GLY A 55 ASN A 62 -1 O ALA A 59 N ARG A 47 SHEET 3 AA2 5 GLU A 67 ILE A 74 -1 O GLU A 67 N ASN A 62 SHEET 4 AA2 5 VAL A 120 GLU A 125 -1 O TYR A 124 N ALA A 70 SHEET 5 AA2 5 VAL A 105 ILE A 108 -1 N ASP A 107 O VAL A 123 SHEET 1 AA3 3 THR A 129 ASP A 130 0 SHEET 2 AA3 3 LEU A 175 LEU A 177 -1 O LEU A 177 N THR A 129 SHEET 3 AA3 3 LEU A 183 LEU A 185 -1 O LYS A 184 N LEU A 176 SHEET 1 AA4 2 VAL A 165 LEU A 166 0 SHEET 2 AA4 2 ARG A 192 THR A 193 -1 O ARG A 192 N LEU A 166 CISPEP 1 PRO A 44 PRO A 45 0 2.17 CRYST1 132.950 132.950 132.950 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007522 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007522 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007522 0.00000