HEADER TRANSCRIPTION 07-DEC-21 7W80 TITLE CRYSTAL STRUCTURE OF THE HETERODIMERIC HIF-2 IN COMPLEX WITH TITLE 2 ANTAGONIST BELZUTIFAN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ARNT PROTEIN,DIOXIN RECEPTOR,NUCLEAR TRANSLOCATOR,HYPOXIA- COMPND 5 INDUCIBLE FACTOR 1-BETA,HIF-1-BETA,HIF1-BETA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ENDOTHELIAL PAS DOMAIN-CONTAINING PROTEIN 1; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: EPAS-1,HIF-1-ALPHA-LIKE FACTOR,HLF,MHLF,HIF-RELATED FACTOR, COMPND 11 HRF,HYPOXIA-INDUCIBLE FACTOR 2-ALPHA,HIF-2-ALPHA,HIF2-ALPHA; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ARNT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMKH; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: EPAS1, HIF2A; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PSJ2 KEYWDS HYPOXIA-INDUCIBLE FACTOR 2, HIF-2ALPHA, ARNT, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR X.REN,X.DIAO,J.ZHUANG,D.WU REVDAT 4 29-NOV-23 7W80 1 REMARK REVDAT 3 02-NOV-22 7W80 1 JRNL REVDAT 2 05-OCT-22 7W80 1 JRNL HETSYN REVDAT 1 21-SEP-22 7W80 0 JRNL AUTH X.REN,X.DIAO,J.ZHUANG,D.WU JRNL TITL STRUCTURAL BASIS FOR THE ALLOSTERIC INHIBITION OF JRNL TITL 2 HYPOXIA-INDUCIBLE FACTOR (HIF)-2 BY BELZUTIFAN. JRNL REF MOL.PHARMACOL. 2022 JRNL REFN ESSN 1521-0111 JRNL PMID 36167425 JRNL DOI 10.1124/MOLPHARM.122.000525 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 18322 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1820 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3800 - 6.4706 0.98 1288 140 0.2079 0.2716 REMARK 3 2 6.4706 - 5.1381 1.00 1292 137 0.2308 0.2667 REMARK 3 3 5.1381 - 4.4892 1.00 1258 139 0.1803 0.2442 REMARK 3 4 4.4892 - 4.0790 1.00 1275 139 0.1808 0.2288 REMARK 3 5 4.0790 - 3.7868 1.00 1260 142 0.2077 0.2317 REMARK 3 6 3.7868 - 3.5636 1.00 1274 138 0.2155 0.3094 REMARK 3 7 3.5636 - 3.3852 1.00 1282 143 0.2301 0.2777 REMARK 3 8 3.3852 - 3.2379 1.00 1250 138 0.2499 0.3242 REMARK 3 9 3.2379 - 3.1133 1.00 1263 148 0.2320 0.2795 REMARK 3 10 3.1133 - 3.0059 1.00 1276 141 0.2345 0.2995 REMARK 3 11 3.0059 - 2.9119 1.00 1252 137 0.2681 0.3580 REMARK 3 12 2.9119 - 2.8287 1.00 1292 147 0.2942 0.4061 REMARK 3 13 2.8287 - 2.7542 0.99 1240 131 0.3672 0.4331 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 87.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -2.0632 -17.9365 29.7408 REMARK 3 T TENSOR REMARK 3 T11: 0.3694 T22: 0.5282 REMARK 3 T33: 0.4057 T12: 0.0166 REMARK 3 T13: 0.0977 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.0644 L22: 1.3138 REMARK 3 L33: 3.3973 L12: 0.3590 REMARK 3 L13: 0.9395 L23: 0.3009 REMARK 3 S TENSOR REMARK 3 S11: -0.0810 S12: -0.3221 S13: 0.0871 REMARK 3 S21: 0.0126 S22: -0.0949 S23: 0.0262 REMARK 3 S31: -0.1517 S32: -0.5231 S33: 0.1666 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7W80 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300026132. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 31, 2020 REMARK 200 DATA SCALING SOFTWARE : XDS JAN 31, 2020 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18363 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.754 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.63500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 4ZP4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TACSIMATE, PEG3350, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.09350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 81 REMARK 465 SER A 82 REMARK 465 SER A 83 REMARK 465 ALA A 84 REMARK 465 ASP A 85 REMARK 465 LYS A 86 REMARK 465 GLU A 87 REMARK 465 ARG A 88 REMARK 465 LEU A 89 REMARK 465 ALA A 90 REMARK 465 ARG A 91 REMARK 465 GLU A 92 REMARK 465 ASN A 93 REMARK 465 HIS A 94 REMARK 465 SER A 95 REMARK 465 GLU A 96 REMARK 465 ILE A 97 REMARK 465 GLU A 98 REMARK 465 ARG A 99 REMARK 465 ARG A 100 REMARK 465 ARG A 143 REMARK 465 GLY A 144 REMARK 465 THR A 145 REMARK 465 GLY A 146 REMARK 465 ASN A 147 REMARK 465 THR A 148 REMARK 465 SER A 149 REMARK 465 THR A 150 REMARK 465 ASP A 151 REMARK 465 GLY A 152 REMARK 465 SER A 153 REMARK 465 TYR A 154 REMARK 465 LYS A 155 REMARK 465 PRO A 156 REMARK 465 SER A 157 REMARK 465 ALA A 231 REMARK 465 LEU A 232 REMARK 465 THR A 233 REMARK 465 GLY A 234 REMARK 465 ARG A 235 REMARK 465 VAL A 236 REMARK 465 LEU A 237 REMARK 465 ASP A 238 REMARK 465 LEU A 239 REMARK 465 LYS A 240 REMARK 465 THR A 241 REMARK 465 GLY A 242 REMARK 465 THR A 243 REMARK 465 VAL A 244 REMARK 465 LYS A 245 REMARK 465 LYS A 246 REMARK 465 GLU A 247 REMARK 465 GLY A 248 REMARK 465 GLN A 249 REMARK 465 GLN A 250 REMARK 465 SER A 251 REMARK 465 SER A 252 REMARK 465 MET A 253 REMARK 465 ARG A 254 REMARK 465 MET A 255 REMARK 465 CYS A 256 REMARK 465 THR A 271 REMARK 465 SER A 272 REMARK 465 SER A 273 REMARK 465 VAL A 274 REMARK 465 ASP A 275 REMARK 465 PRO A 276 REMARK 465 VAL A 277 REMARK 465 SER A 278 REMARK 465 MET A 279 REMARK 465 ASN A 280 REMARK 465 ARG A 281 REMARK 465 LEU A 282 REMARK 465 SER A 283 REMARK 465 PHE A 284 REMARK 465 LEU A 285 REMARK 465 ARG A 286 REMARK 465 ASN A 287 REMARK 465 ARG A 288 REMARK 465 CYS A 289 REMARK 465 ARG A 290 REMARK 465 ASN A 291 REMARK 465 GLY A 292 REMARK 465 LEU A 293 REMARK 465 GLY A 294 REMARK 465 SER A 295 REMARK 465 VAL A 296 REMARK 465 LYS A 297 REMARK 465 GLU A 298 REMARK 465 GLY A 299 REMARK 465 GLU A 300 REMARK 465 PRO A 301 REMARK 465 PRO A 317 REMARK 465 ALA A 318 REMARK 465 GLY A 319 REMARK 465 VAL A 320 REMARK 465 SER A 321 REMARK 465 LEU A 322 REMARK 465 PRO A 323 REMARK 465 ASP A 324 REMARK 465 ASP A 325 REMARK 465 ASP A 326 REMARK 465 PRO A 327 REMARK 465 GLU A 328 REMARK 465 ALA A 329 REMARK 465 GLY A 330 REMARK 465 GLN A 331 REMARK 465 GLY A 332 REMARK 465 SER A 333 REMARK 465 THR A 346 REMARK 465 SER A 347 REMARK 465 SER A 348 REMARK 465 PRO A 349 REMARK 465 ASN A 350 REMARK 465 CYS A 351 REMARK 465 THR A 352 REMARK 465 ASP A 353 REMARK 465 MET A 354 REMARK 465 SER A 355 REMARK 465 ASN A 356 REMARK 465 ILE A 357 REMARK 465 CYS A 358 REMARK 465 GLN A 359 REMARK 465 MET B 2 REMARK 465 ALA B 3 REMARK 465 ASP B 4 REMARK 465 LYS B 5 REMARK 465 GLU B 6 REMARK 465 LYS B 7 REMARK 465 LYS B 8 REMARK 465 ARG B 9 REMARK 465 SER B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 GLU B 13 REMARK 465 LEU B 14 REMARK 465 ARG B 15 REMARK 465 LYS B 16 REMARK 465 GLU B 17 REMARK 465 LYS B 18 REMARK 465 SER B 19 REMARK 465 ARG B 20 REMARK 465 ASP B 21 REMARK 465 ALA B 22 REMARK 465 ALA B 23 REMARK 465 ARG B 24 REMARK 465 CYS B 25 REMARK 465 ARG B 26 REMARK 465 ARG B 27 REMARK 465 SER B 28 REMARK 465 LYS B 29 REMARK 465 LEU B 41 REMARK 465 PRO B 42 REMARK 465 LEU B 43 REMARK 465 PRO B 44 REMARK 465 GLU B 76 REMARK 465 ASN B 77 REMARK 465 GLU B 78 REMARK 465 SER B 79 REMARK 465 GLU B 80 REMARK 465 ALA B 81 REMARK 465 GLU B 82 REMARK 465 ALA B 83 REMARK 465 ASP B 84 REMARK 465 GLN B 85 REMARK 465 LYS B 150 REMARK 465 ASN B 151 REMARK 465 GLY B 152 REMARK 465 SER B 153 REMARK 465 GLY B 154 REMARK 465 PHE B 155 REMARK 465 GLY B 156 REMARK 465 LYS B 157 REMARK 465 LYS B 158 REMARK 465 SER B 159 REMARK 465 LYS B 160 REMARK 465 ASP B 161 REMARK 465 ASN B 204 REMARK 465 CYS B 205 REMARK 465 PRO B 206 REMARK 465 PRO B 207 REMARK 465 HIS B 208 REMARK 465 SER B 209 REMARK 465 SER B 210 REMARK 465 LEU B 211 REMARK 465 CYS B 212 REMARK 465 GLY B 213 REMARK 465 SER B 214 REMARK 465 LYS B 215 REMARK 465 GLU B 216 REMARK 465 GLU B 360 REMARK 465 SER B 361 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 124 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 MET A 139 CG SD CE REMARK 470 PHE A 158 CG CD1 CD2 CE1 CE2 CZ REMARK 470 MET A 257 CG SD CE REMARK 470 PHE B 34 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR B 35 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS B 39 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 40 CG CD OE1 OE2 REMARK 470 HIS B 45 CG ND1 CD2 CE1 NE2 REMARK 470 GLN B 86 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 434 -4.75 82.42 REMARK 500 ASP A 452 13.52 59.69 REMARK 500 SER B 49 -70.06 -66.12 REMARK 500 LYS B 53 -125.11 58.15 REMARK 500 GLU B 96 34.48 -99.86 REMARK 500 REMARK 500 REMARK: NULL DBREF 7W80 A 82 464 UNP P53762 ARNT_MOUSE 82 464 DBREF 7W80 B 3 361 UNP P97481 EPAS1_MOUSE 3 361 SEQADV 7W80 MET A 81 UNP P53762 INITIATING METHIONINE SEQADV 7W80 MET B 2 UNP P97481 INITIATING METHIONINE SEQRES 1 A 384 MET SER SER ALA ASP LYS GLU ARG LEU ALA ARG GLU ASN SEQRES 2 A 384 HIS SER GLU ILE GLU ARG ARG ARG ARG ASN LYS MET THR SEQRES 3 A 384 ALA TYR ILE THR GLU LEU SER ASP MET VAL PRO THR CYS SEQRES 4 A 384 SER ALA LEU ALA ARG LYS PRO ASP LYS LEU THR ILE LEU SEQRES 5 A 384 ARG MET ALA VAL SER HIS MET LYS SER LEU ARG GLY THR SEQRES 6 A 384 GLY ASN THR SER THR ASP GLY SER TYR LYS PRO SER PHE SEQRES 7 A 384 LEU THR ASP GLN GLU LEU LYS HIS LEU ILE LEU GLU ALA SEQRES 8 A 384 ALA ASP GLY PHE LEU PHE ILE VAL SER CYS GLU THR GLY SEQRES 9 A 384 ARG VAL VAL TYR VAL SER ASP SER VAL THR PRO VAL LEU SEQRES 10 A 384 ASN GLN PRO GLN SER GLU TRP PHE GLY SER THR LEU TYR SEQRES 11 A 384 ASP GLN VAL HIS PRO ASP ASP VAL ASP LYS LEU ARG GLU SEQRES 12 A 384 GLN LEU SER THR SER GLU ASN ALA LEU THR GLY ARG VAL SEQRES 13 A 384 LEU ASP LEU LYS THR GLY THR VAL LYS LYS GLU GLY GLN SEQRES 14 A 384 GLN SER SER MET ARG MET CYS MET GLY SER ARG ARG SER SEQRES 15 A 384 PHE ILE CYS ARG MET ARG CYS GLY THR SER SER VAL ASP SEQRES 16 A 384 PRO VAL SER MET ASN ARG LEU SER PHE LEU ARG ASN ARG SEQRES 17 A 384 CYS ARG ASN GLY LEU GLY SER VAL LYS GLU GLY GLU PRO SEQRES 18 A 384 HIS PHE VAL VAL VAL HIS CYS THR GLY TYR ILE LYS ALA SEQRES 19 A 384 TRP PRO PRO ALA GLY VAL SER LEU PRO ASP ASP ASP PRO SEQRES 20 A 384 GLU ALA GLY GLN GLY SER LYS PHE CYS LEU VAL ALA ILE SEQRES 21 A 384 GLY ARG LEU GLN VAL THR SER SER PRO ASN CYS THR ASP SEQRES 22 A 384 MET SER ASN ILE CYS GLN PRO THR GLU PHE ILE SER ARG SEQRES 23 A 384 HIS ASN ILE GLU GLY ILE PHE THR PHE VAL ASP HIS ARG SEQRES 24 A 384 CYS VAL ALA THR VAL GLY TYR GLN PRO GLN GLU LEU LEU SEQRES 25 A 384 GLY LYS ASN ILE VAL GLU PHE CYS HIS PRO GLU ASP GLN SEQRES 26 A 384 GLN LEU LEU ARG ASP SER PHE GLN GLN VAL VAL LYS LEU SEQRES 27 A 384 LYS GLY GLN VAL LEU SER VAL MET PHE ARG PHE ARG SER SEQRES 28 A 384 LYS THR ARG GLU TRP LEU TRP MET ARG THR SER SER PHE SEQRES 29 A 384 THR PHE GLN ASN PRO TYR SER ASP GLU ILE GLU TYR ILE SEQRES 30 A 384 ILE CYS THR ASN THR ASN VAL SEQRES 1 B 360 MET ALA ASP LYS GLU LYS LYS ARG SER SER SER GLU LEU SEQRES 2 B 360 ARG LYS GLU LYS SER ARG ASP ALA ALA ARG CYS ARG ARG SEQRES 3 B 360 SER LYS GLU THR GLU VAL PHE TYR GLU LEU ALA HIS GLU SEQRES 4 B 360 LEU PRO LEU PRO HIS SER VAL SER SER HIS LEU ASP LYS SEQRES 5 B 360 ALA SER ILE MET ARG LEU ALA ILE SER PHE LEU ARG THR SEQRES 6 B 360 HIS LYS LEU LEU SER SER VAL CYS SER GLU ASN GLU SER SEQRES 7 B 360 GLU ALA GLU ALA ASP GLN GLN MET ASP ASN LEU TYR LEU SEQRES 8 B 360 LYS ALA LEU GLU GLY PHE ILE ALA VAL VAL THR GLN ASP SEQRES 9 B 360 GLY ASP MET ILE PHE LEU SER GLU ASN ILE SER LYS PHE SEQRES 10 B 360 MET GLY LEU THR GLN VAL GLU LEU THR GLY HIS SER ILE SEQRES 11 B 360 PHE ASP PHE THR HIS PRO CYS ASP HIS GLU GLU ILE ARG SEQRES 12 B 360 GLU ASN LEU THR LEU LYS ASN GLY SER GLY PHE GLY LYS SEQRES 13 B 360 LYS SER LYS ASP VAL SER THR GLU ARG ASP PHE PHE MET SEQRES 14 B 360 ARG MET LYS CYS THR VAL THR ASN ARG GLY ARG THR VAL SEQRES 15 B 360 ASN LEU LYS SER ALA THR TRP LYS VAL LEU HIS CYS THR SEQRES 16 B 360 GLY GLN VAL ARG VAL TYR ASN ASN CYS PRO PRO HIS SER SEQRES 17 B 360 SER LEU CYS GLY SER LYS GLU PRO LEU LEU SER CYS LEU SEQRES 18 B 360 ILE ILE MET CYS GLU PRO ILE GLN HIS PRO SER HIS MET SEQRES 19 B 360 ASP ILE PRO LEU ASP SER LYS THR PHE LEU SER ARG HIS SEQRES 20 B 360 SER MET ASP MET LYS PHE THR TYR CYS ASP ASP ARG ILE SEQRES 21 B 360 LEU GLU LEU ILE GLY TYR HIS PRO GLU GLU LEU LEU GLY SEQRES 22 B 360 ARG SER ALA TYR GLU PHE TYR HIS ALA LEU ASP SER GLU SEQRES 23 B 360 ASN MET THR LYS SER HIS GLN ASN LEU CYS THR LYS GLY SEQRES 24 B 360 GLN VAL VAL SER GLY GLN TYR ARG MET LEU ALA LYS HIS SEQRES 25 B 360 GLY GLY TYR VAL TRP LEU GLU THR GLN GLY THR VAL ILE SEQRES 26 B 360 TYR ASN PRO ARG ASN LEU GLN PRO GLN CYS ILE MET CYS SEQRES 27 B 360 VAL ASN TYR VAL LEU SER GLU ILE GLU LYS ASN ASP VAL SEQRES 28 B 360 VAL PHE SER MET ASP GLN THR GLU SER HET 72Q B 401 26 HETNAM 72Q 3-{[(1S,2S,3R)-2,3-DIFLUORO-1-HYDROXY-7- HETNAM 2 72Q (METHYLSULFONYL)-2,3-DIHYDRO-1H-INDEN-4-YL]OXY}-5- HETNAM 3 72Q FLUOROBENZONITRILE HETSYN 72Q BELZUTIFAN FORMUL 3 72Q C17 H12 F3 N O4 S FORMUL 4 HOH *28(H2 O) HELIX 1 AA1 ARG A 102 MET A 115 1 14 HELIX 2 AA2 ASP A 127 LEU A 142 1 16 HELIX 3 AA3 THR A 160 ASP A 173 1 14 HELIX 4 AA4 SER A 192 ASN A 198 1 7 HELIX 5 AA5 PRO A 200 PHE A 205 1 6 HELIX 6 AA6 THR A 208 VAL A 213 5 6 HELIX 7 AA7 HIS A 214 ASP A 216 5 3 HELIX 8 AA8 ASP A 217 SER A 226 1 10 HELIX 9 AA9 ARG A 379 VAL A 384 1 6 HELIX 10 AB1 GLN A 387 LEU A 392 1 6 HELIX 11 AB2 ASN A 395 CYS A 400 5 6 HELIX 12 AB3 HIS A 401 GLU A 403 5 3 HELIX 13 AB4 ASP A 404 LEU A 418 1 15 HELIX 14 AB5 GLU B 30 TYR B 35 5 6 HELIX 15 AB6 ALA B 54 CYS B 74 1 21 HELIX 16 AB7 ASN B 89 LEU B 95 1 7 HELIX 17 AB8 ASN B 114 GLY B 120 1 7 HELIX 18 AB9 THR B 122 THR B 127 1 6 HELIX 19 AC1 SER B 130 THR B 135 5 6 HELIX 20 AC2 HIS B 136 CYS B 138 5 3 HELIX 21 AC3 ASP B 139 THR B 148 1 10 HELIX 22 AC4 ASP B 259 ILE B 265 1 7 HELIX 23 AC5 HIS B 268 LEU B 272 5 5 HELIX 24 AC6 SER B 276 PHE B 280 5 5 HELIX 25 AC7 ASP B 285 GLY B 300 1 16 SHEET 1 AA1 5 VAL A 186 VAL A 189 0 SHEET 2 AA1 5 GLY A 174 SER A 180 -1 N ILE A 178 O TYR A 188 SHEET 3 AA1 5 PHE A 335 LEU A 343 -1 O GLY A 341 N PHE A 175 SHEET 4 AA1 5 PHE A 303 ALA A 314 -1 N THR A 309 O ILE A 340 SHEET 5 AA1 5 ARG A 260 ARG A 268 -1 N PHE A 263 O CYS A 308 SHEET 1 AA2 5 PHE A 373 VAL A 376 0 SHEET 2 AA2 5 GLU A 362 HIS A 367 -1 N ARG A 366 O THR A 374 SHEET 3 AA2 5 ILE A 454 ASN A 463 -1 O CYS A 459 N SER A 365 SHEET 4 AA2 5 LEU A 437 GLN A 447 -1 N ARG A 440 O THR A 462 SHEET 5 AA2 5 LEU A 423 PHE A 429 -1 N PHE A 429 O LEU A 437 SHEET 1 AA3 5 PHE B 110 LEU B 111 0 SHEET 2 AA3 5 PHE B 98 THR B 103 -1 N VAL B 101 O PHE B 110 SHEET 3 AA3 5 LEU B 219 PRO B 228 -1 O CYS B 226 N PHE B 98 SHEET 4 AA3 5 THR B 189 TYR B 202 -1 N HIS B 194 O GLU B 227 SHEET 5 AA3 5 GLU B 165 CYS B 174 -1 N MET B 170 O LEU B 193 SHEET 1 AA4 5 PHE B 254 CYS B 257 0 SHEET 2 AA4 5 THR B 243 HIS B 248 -1 N ARG B 247 O THR B 255 SHEET 3 AA4 5 GLN B 333 VAL B 343 -1 O CYS B 339 N SER B 246 SHEET 4 AA4 5 TYR B 316 ASN B 328 -1 N GLU B 320 O TYR B 342 SHEET 5 AA4 5 GLN B 301 VAL B 303 -1 N VAL B 302 O GLY B 323 SHEET 1 AA5 5 PHE B 254 CYS B 257 0 SHEET 2 AA5 5 THR B 243 HIS B 248 -1 N ARG B 247 O THR B 255 SHEET 3 AA5 5 GLN B 333 VAL B 343 -1 O CYS B 339 N SER B 246 SHEET 4 AA5 5 TYR B 316 ASN B 328 -1 N GLU B 320 O TYR B 342 SHEET 5 AA5 5 TYR B 307 LEU B 310 -1 N MET B 309 O VAL B 317 CRYST1 49.192 98.187 77.739 90.00 107.16 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020329 0.000000 0.006277 0.00000 SCALE2 0.000000 0.010185 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013463 0.00000