HEADER VIRAL PROTEIN 07-DEC-21 7W83 TITLE STRUCTURE OF THE C-TERMINAL HEAD DOMAIN OF THE FOWL ADENOVIRUS TYPE 4 TITLE 2 FIBER 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBER-2 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FOWL AVIADENOVIRUS 4; SOURCE 3 ORGANISM_TAXID: 130663; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FOWL ADENOVIRUS TYPE 4, FIBER 2, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Q.Y.JIN,G.P.ZHANG REVDAT 2 29-NOV-23 7W83 1 REMARK REVDAT 1 29-DEC-21 7W83 0 JRNL AUTH Q.Y.JIN JRNL TITL STRUCTURE OF THE C-TERMINAL HEAD DOMAIN OF THE FOWL JRNL TITL 2 ADENOVIRUS TYPE 4 FIBER 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 93029 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 5046 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.29 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.32 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6161 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2890 REMARK 3 BIN FREE R VALUE SET COUNT : 298 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3004 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 782 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.059 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.990 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3092 ; 0.014 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 2634 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4252 ; 1.694 ; 1.653 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6172 ; 0.996 ; 1.620 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 397 ; 7.408 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 128 ;37.551 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 415 ;11.790 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;19.114 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 423 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3503 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 601 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7W83 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300025200. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 273 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98150 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.290 REMARK 200 RESOLUTION RANGE LOW (A) : 50.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 17.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2VTW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE TRIHYDRATE PH 7.0 REMARK 280 12% W/V POLYETHYLENE GLYCOL 3,350, EVAPORATION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 96.30000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 96.30000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 96.30000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -30.17000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -52.25597 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 30.17000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -52.25597 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 601 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 620 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 650 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 670 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 647 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 667 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 689 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21 REMARK 465 VAL A 22 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 GLY B 13 REMARK 465 LEU B 14 REMARK 465 VAL B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 465 GLY B 18 REMARK 465 SER B 19 REMARK 465 HIS B 20 REMARK 465 MET B 21 REMARK 465 VAL B 22 REMARK 465 SER B 23 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 388 O HOH B 526 1.01 REMARK 500 O HOH A 310 O HOH A 394 1.03 REMARK 500 O HOH A 508 O HOH A 553 1.04 REMARK 500 O HOH B 398 O HOH B 401 1.04 REMARK 500 O HOH B 483 O HOH B 569 1.04 REMARK 500 O HOH B 364 O HOH B 553 1.08 REMARK 500 O HOH B 381 O HOH B 528 1.11 REMARK 500 O HOH A 405 O HOH A 488 1.11 REMARK 500 O HOH B 400 O HOH B 572 1.14 REMARK 500 O HOH B 341 O HOH B 462 1.14 REMARK 500 O HOH B 395 O HOH B 545 1.15 REMARK 500 O HOH B 451 O HOH B 541 1.16 REMARK 500 O HOH A 350 O HOH A 384 1.17 REMARK 500 O HOH B 305 O HOH B 447 1.19 REMARK 500 O HOH A 427 O HOH A 526 1.22 REMARK 500 O HOH A 309 O HOH A 452 1.23 REMARK 500 O HOH A 317 O HOH A 497 1.25 REMARK 500 O HOH A 411 O HOH A 413 1.27 REMARK 500 O HOH A 341 O HOH A 548 1.27 REMARK 500 O HOH A 372 O HOH A 510 1.28 REMARK 500 O HOH A 612 O HOH A 657 1.29 REMARK 500 O HOH A 493 O HOH A 514 1.29 REMARK 500 O HOH A 318 O HOH A 566 1.30 REMARK 500 O HOH B 543 O HOH B 546 1.31 REMARK 500 O HOH A 445 O HOH A 541 1.33 REMARK 500 O HOH A 391 O HOH A 479 1.34 REMARK 500 O HOH B 319 O HOH B 520 1.35 REMARK 500 O HOH A 319 O HOH A 530 1.37 REMARK 500 O HOH B 445 O HOH B 496 1.37 REMARK 500 O HOH B 339 O HOH B 474 1.38 REMARK 500 O HOH B 512 O HOH B 575 1.40 REMARK 500 O HOH B 382 O HOH B 531 1.40 REMARK 500 O HOH B 446 O HOH B 457 1.41 REMARK 500 O HOH B 476 O HOH B 518 1.44 REMARK 500 O HOH B 522 O HOH B 589 1.45 REMARK 500 O HOH A 380 O HOH A 551 1.45 REMARK 500 O HOH B 527 O HOH B 530 1.45 REMARK 500 O HOH B 307 O HOH B 525 1.46 REMARK 500 O HOH B 317 O HOH B 397 1.48 REMARK 500 O HOH B 429 O HOH B 554 1.48 REMARK 500 O HOH B 361 O HOH B 487 1.50 REMARK 500 O HOH B 332 O HOH B 564 1.52 REMARK 500 O HOH A 364 O HOH A 529 1.52 REMARK 500 CB SER B 197 O HOH B 302 1.53 REMARK 500 O HOH A 468 O HOH A 542 1.54 REMARK 500 O HOH A 444 O HOH A 459 1.54 REMARK 500 CB THR A 43 O HOH A 311 1.56 REMARK 500 CB THR B 28 O HOH B 308 1.57 REMARK 500 O HOH B 335 O HOH B 445 1.58 REMARK 500 O HOH A 345 O HOH A 443 1.60 REMARK 500 REMARK 500 THIS ENTRY HAS 142 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 305 O HOH A 356 2445 1.01 REMARK 500 O HOH A 312 O HOH A 316 3555 1.15 REMARK 500 O HOH B 426 O HOH B 507 2455 1.18 REMARK 500 O HOH B 309 O HOH B 421 3445 1.26 REMARK 500 O HOH A 303 O HOH A 536 3555 1.50 REMARK 500 O HOH A 616 O HOH A 639 2445 1.55 REMARK 500 O HOH B 698 O HOH B 698 2555 1.70 REMARK 500 O HOH A 526 O HOH A 557 2555 1.82 REMARK 500 O HOH A 614 O HOH B 675 3545 2.04 REMARK 500 O HOH B 340 O HOH B 349 2555 2.06 REMARK 500 O HOH A 307 O HOH A 400 2445 2.09 REMARK 500 O HOH B 348 O HOH B 572 2555 2.11 REMARK 500 O HOH A 497 O HOH A 640 3655 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 126 CD GLU A 126 OE2 0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 39 70.92 -104.99 REMARK 500 ASP A 85 128.68 126.74 REMARK 500 CYS A 105 84.07 -161.84 REMARK 500 SER A 197 -59.51 -171.33 REMARK 500 TYR B 39 71.67 -110.35 REMARK 500 CYS B 105 81.15 -158.09 REMARK 500 SER B 197 -55.33 -171.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 131 0.29 SIDE CHAIN REMARK 500 ARG B 183 0.16 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 677 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 678 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A 679 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH A 680 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH A 681 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH A 682 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH A 683 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH A 684 DISTANCE = 7.31 ANGSTROMS REMARK 525 HOH B 692 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B 693 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH B 694 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 695 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH B 696 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH B 697 DISTANCE = 7.10 ANGSTROMS REMARK 525 HOH B 698 DISTANCE = 8.04 ANGSTROMS DBREF1 7W83 A 22 222 UNP A0A346SCF3_9ADEN DBREF2 7W83 A A0A346SCF3 279 479 DBREF1 7W83 B 22 222 UNP A0A346SCF3_9ADEN DBREF2 7W83 B A0A346SCF3 279 479 SEQADV 7W83 MET A 1 UNP A0A346SCF INITIATING METHIONINE SEQADV 7W83 GLY A 2 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER A 3 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER A 4 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS A 5 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS A 6 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS A 7 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS A 8 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS A 9 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS A 10 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER A 11 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER A 12 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 GLY A 13 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 LEU A 14 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 VAL A 15 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 PRO A 16 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 ARG A 17 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 GLY A 18 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER A 19 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS A 20 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 MET A 21 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 MET B 1 UNP A0A346SCF INITIATING METHIONINE SEQADV 7W83 GLY B 2 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER B 3 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER B 4 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS B 5 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS B 6 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS B 7 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS B 8 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS B 9 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS B 10 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER B 11 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER B 12 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 GLY B 13 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 LEU B 14 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 VAL B 15 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 PRO B 16 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 ARG B 17 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 GLY B 18 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 SER B 19 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 HIS B 20 UNP A0A346SCF EXPRESSION TAG SEQADV 7W83 MET B 21 UNP A0A346SCF EXPRESSION TAG SEQRES 1 A 222 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 222 LEU VAL PRO ARG GLY SER HIS MET VAL SER THR PRO ILE SEQRES 3 A 222 ALA THR PHE VAL SER GLY SER PRO SER LEU ASN THR TYR SEQRES 4 A 222 ASN ALA THR THR VAL ASN SER SER ALA ASN ALA PHE SER SEQRES 5 A 222 CYS ALA TYR TYR LEU GLN GLN TRP ASN ILE GLN GLY LEU SEQRES 6 A 222 LEU VAL THR SER LEU TYR LEU LYS LEU ASP SER ALA THR SEQRES 7 A 222 MET GLY ASN ARG PRO GLY ASP LEU ASN SER ALA ASN ALA SEQRES 8 A 222 LYS TRP PHE THR PHE TRP VAL SER ALA TYR LEU GLN GLN SEQRES 9 A 222 CYS ASN PRO SER GLY ILE GLN ALA GLY THR VAL SER PRO SEQRES 10 A 222 SER THR ALA THR LEU THR ASP PHE GLU PRO MET ALA ASN SEQRES 11 A 222 ARG SER VAL THR SER PRO TRP THR TYR SER ALA ASN GLY SEQRES 12 A 222 TYR TYR GLU PRO SER ILE GLY GLU PHE GLN VAL PHE SER SEQRES 13 A 222 PRO VAL VAL THR GLY ALA TRP ASN PRO GLY ASN ILE GLY SEQRES 14 A 222 ILE ARG VAL LEU PRO VAL PRO VAL SER ALA SER GLY GLU SEQRES 15 A 222 ARG TYR THR LEU LEU CYS TYR SER LEU GLN CYS THR ASN SEQRES 16 A 222 ALA SER ILE PHE ASN PRO ASN ASN SER GLY THR MET ILE SEQRES 17 A 222 VAL GLY PRO VAL LEU TYR SER CYS PRO ALA ALA SER LEU SEQRES 18 A 222 PRO SEQRES 1 B 222 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 222 LEU VAL PRO ARG GLY SER HIS MET VAL SER THR PRO ILE SEQRES 3 B 222 ALA THR PHE VAL SER GLY SER PRO SER LEU ASN THR TYR SEQRES 4 B 222 ASN ALA THR THR VAL ASN SER SER ALA ASN ALA PHE SER SEQRES 5 B 222 CYS ALA TYR TYR LEU GLN GLN TRP ASN ILE GLN GLY LEU SEQRES 6 B 222 LEU VAL THR SER LEU TYR LEU LYS LEU ASP SER ALA THR SEQRES 7 B 222 MET GLY ASN ARG PRO GLY ASP LEU ASN SER ALA ASN ALA SEQRES 8 B 222 LYS TRP PHE THR PHE TRP VAL SER ALA TYR LEU GLN GLN SEQRES 9 B 222 CYS ASN PRO SER GLY ILE GLN ALA GLY THR VAL SER PRO SEQRES 10 B 222 SER THR ALA THR LEU THR ASP PHE GLU PRO MET ALA ASN SEQRES 11 B 222 ARG SER VAL THR SER PRO TRP THR TYR SER ALA ASN GLY SEQRES 12 B 222 TYR TYR GLU PRO SER ILE GLY GLU PHE GLN VAL PHE SER SEQRES 13 B 222 PRO VAL VAL THR GLY ALA TRP ASN PRO GLY ASN ILE GLY SEQRES 14 B 222 ILE ARG VAL LEU PRO VAL PRO VAL SER ALA SER GLY GLU SEQRES 15 B 222 ARG TYR THR LEU LEU CYS TYR SER LEU GLN CYS THR ASN SEQRES 16 B 222 ALA SER ILE PHE ASN PRO ASN ASN SER GLY THR MET ILE SEQRES 17 B 222 VAL GLY PRO VAL LEU TYR SER CYS PRO ALA ALA SER LEU SEQRES 18 B 222 PRO FORMUL 3 HOH *782(H2 O) HELIX 1 AA1 ASP A 85 ASN A 90 1 6 HELIX 2 AA2 THR A 121 GLU A 126 5 6 HELIX 3 AA3 ASP B 85 ASN B 90 1 6 HELIX 4 AA4 THR B 121 GLU B 126 5 6 SHEET 1 AA1 8 THR A 114 SER A 116 0 SHEET 2 AA1 8 ILE A 26 GLY A 32 -1 N THR A 28 O SER A 116 SHEET 3 AA1 8 ALA A 50 ILE A 62 -1 O LEU A 57 N SER A 31 SHEET 4 AA1 8 ALA A 41 ASN A 45 -1 N THR A 43 O PHE A 51 SHEET 5 AA1 8 TRP A 93 VAL A 98 -1 O THR A 95 N VAL A 44 SHEET 6 AA1 8 GLU A 182 CYS A 193 -1 O LEU A 191 N PHE A 94 SHEET 7 AA1 8 ILE A 168 ALA A 179 -1 N VAL A 177 O TYR A 184 SHEET 8 AA1 8 GLU A 151 PHE A 155 -1 N PHE A 155 O ILE A 168 SHEET 1 AA2 9 TRP A 137 THR A 138 0 SHEET 2 AA2 9 ILE A 168 ALA A 179 1 O SER A 178 N TRP A 137 SHEET 3 AA2 9 GLU A 182 CYS A 193 -1 O TYR A 184 N VAL A 177 SHEET 4 AA2 9 TRP A 93 VAL A 98 -1 N PHE A 94 O LEU A 191 SHEET 5 AA2 9 ALA A 41 ASN A 45 -1 N VAL A 44 O THR A 95 SHEET 6 AA2 9 ALA A 50 ILE A 62 -1 O PHE A 51 N THR A 43 SHEET 7 AA2 9 LEU A 65 ASP A 75 -1 O SER A 69 N GLN A 58 SHEET 8 AA2 9 GLY A 205 PRO A 217 -1 O VAL A 212 N LEU A 70 SHEET 9 AA2 9 VAL A 158 GLY A 161 -1 N VAL A 158 O ILE A 208 SHEET 1 AA3 8 THR B 114 SER B 116 0 SHEET 2 AA3 8 ILE B 26 GLY B 32 -1 N VAL B 30 O THR B 114 SHEET 3 AA3 8 ALA B 50 ILE B 62 -1 O LEU B 57 N SER B 31 SHEET 4 AA3 8 ALA B 41 ASN B 45 -1 N THR B 43 O PHE B 51 SHEET 5 AA3 8 TRP B 93 VAL B 98 -1 O THR B 95 N VAL B 44 SHEET 6 AA3 8 GLU B 182 CYS B 193 -1 O LEU B 191 N PHE B 94 SHEET 7 AA3 8 ILE B 168 ALA B 179 -1 N VAL B 175 O LEU B 186 SHEET 8 AA3 8 GLU B 151 PHE B 155 -1 N PHE B 155 O ILE B 168 SHEET 1 AA4 9 TRP B 137 THR B 138 0 SHEET 2 AA4 9 ILE B 168 ALA B 179 1 O SER B 178 N TRP B 137 SHEET 3 AA4 9 GLU B 182 CYS B 193 -1 O LEU B 186 N VAL B 175 SHEET 4 AA4 9 TRP B 93 VAL B 98 -1 N PHE B 94 O LEU B 191 SHEET 5 AA4 9 ALA B 41 ASN B 45 -1 N VAL B 44 O THR B 95 SHEET 6 AA4 9 ALA B 50 ILE B 62 -1 O PHE B 51 N THR B 43 SHEET 7 AA4 9 LEU B 65 ASP B 75 -1 O SER B 69 N GLN B 58 SHEET 8 AA4 9 GLY B 205 PRO B 217 -1 O VAL B 212 N LEU B 70 SHEET 9 AA4 9 VAL B 158 GLY B 161 -1 N VAL B 158 O ILE B 208 CISPEP 1 SER A 116 PRO A 117 0 -9.34 CISPEP 2 GLY A 210 PRO A 211 0 1.31 CISPEP 3 SER B 116 PRO B 117 0 -6.29 CISPEP 4 GLY B 210 PRO B 211 0 2.29 CRYST1 60.340 60.340 192.600 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016573 0.009568 0.000000 0.00000 SCALE2 0.000000 0.019137 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005192 0.00000