HEADER CIRCADIAN CLOCK PROTEIN 12-DEC-21 7WA4 TITLE CRYSTAL STRUCTURE OF GIGANTEA IN COMPLEX WITH LKP2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN GIGANTEA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ADAGIO PROTEIN 2; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: LKP2 LOV DOMAIN; COMPND 9 SYNONYM: F-BOX ONLY PROTEIN 2C,FBX2C,FLAVIN-BINDING KELCH REPEAT F- COMPND 10 BOX PROTEIN 1-LIKE PROTEIN 1,FKF1-LIKE PROTEIN 1,LOV KELCH PROTEIN 2; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: GI, AT1G22770, T22J18.6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 10 ORGANISM_COMMON: THALE CRESS; SOURCE 11 ORGANISM_TAXID: 3702; SOURCE 12 GENE: ADO2, FKL1, LKP2, AT2G18915, F19F24.11; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 37762 KEYWDS GI, LOV DOMAIN, FLAVIN-MONONUCLEOTIDE, CIRCADIAN CLOCK PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.PATHAK,P.DAHAL,E.KWON,D.Y.KIM REVDAT 2 04-MAY-22 7WA4 1 JRNL REVDAT 1 27-APR-22 7WA4 0 JRNL AUTH E.KWON,D.PATHAK,P.DAHAL,S.TANDUKAR,H.S.JUNG,W.Y.KIM,D.Y.KIM JRNL TITL STRUCTURAL ANALYSIS OF THE REGULATION OF BLUE-LIGHT JRNL TITL 2 RECEPTORS BY GIGANTEA. JRNL REF CELL REP V. 39 10700 2022 JRNL REFN ESSN 2211-1247 JRNL PMID 35443175 JRNL DOI 10.1016/J.CELREP.2022.110700 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19RC5_4047 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 90.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.140 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 17253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1727 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 90.7200 - 8.0100 0.99 1370 153 0.1931 0.2362 REMARK 3 2 8.0100 - 6.3600 1.00 1374 149 0.2499 0.2837 REMARK 3 3 6.3600 - 5.5600 0.99 1341 145 0.2695 0.2918 REMARK 3 4 5.5500 - 5.0500 0.98 1332 148 0.2210 0.2706 REMARK 3 5 5.0500 - 4.6900 0.98 1340 151 0.2043 0.2470 REMARK 3 6 4.6900 - 4.4100 0.97 1313 142 0.1995 0.2676 REMARK 3 7 4.4100 - 4.1900 0.96 1295 145 0.2114 0.2505 REMARK 3 8 4.1900 - 4.0100 0.94 1282 150 0.2347 0.2890 REMARK 3 9 4.0100 - 3.8500 0.92 1248 135 0.2618 0.3103 REMARK 3 10 3.8500 - 3.7200 0.91 1232 146 0.2910 0.3486 REMARK 3 11 3.7200 - 3.6000 0.89 1201 131 0.3293 0.3745 REMARK 3 12 3.6000 - 3.5000 0.88 1198 132 0.3520 0.4386 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.610 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 16.6578 55.9893 62.8044 REMARK 3 T TENSOR REMARK 3 T11: 0.0614 T22: 0.0030 REMARK 3 T33: 0.0965 T12: -0.1855 REMARK 3 T13: -0.0950 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: -0.0075 L22: 0.0296 REMARK 3 L33: 0.0665 L12: -0.0027 REMARK 3 L13: -0.0165 L23: 0.0223 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: -0.0165 S13: -0.0015 REMARK 3 S21: -0.0219 S22: 0.0082 S23: -0.0323 REMARK 3 S31: 0.1206 S32: -0.0416 S33: -0.0196 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7WA4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300023302. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 11C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97944 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18181 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.190 REMARK 200 R MERGE (I) : 0.17700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.49 REMARK 200 R MERGE FOR SHELL (I) : 1.24100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% MPD, 3%(V/V) PEG 3350, 0.2M REMARK 280 AMMONIUM SULFATE, 0.1M IMIDAZOLE/HCL PH 6.5, MICROBATCH, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.38700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 154.77400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 116.08050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 193.46750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.69350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 GLU A 8 REMARK 465 PRO A 118 REMARK 465 SER A 119 REMARK 465 SER A 120 REMARK 465 GLU A 121 REMARK 465 ASN A 122 REMARK 465 ASP A 123 REMARK 465 TYR A 124 REMARK 465 THR A 149 REMARK 465 GLU A 150 REMARK 465 GLN A 151 REMARK 465 GLN A 152 REMARK 465 ASN A 153 REMARK 465 GLY A 154 REMARK 465 ASP A 155 REMARK 465 THR A 156 REMARK 465 GLU A 157 REMARK 465 ARG A 158 REMARK 465 ASN A 159 REMARK 465 CYS A 160 REMARK 465 LEU A 161 REMARK 465 SER A 162 REMARK 465 LYS A 163 REMARK 465 ALA A 164 REMARK 465 THR A 165 REMARK 465 THR A 166 REMARK 465 SER A 167 REMARK 465 GLY A 168 REMARK 465 SER A 169 REMARK 465 PRO A 170 REMARK 465 THR A 171 REMARK 465 SER A 172 REMARK 465 GLU A 173 REMARK 465 PRO A 174 REMARK 465 LYS A 175 REMARK 465 ALA A 176 REMARK 465 GLY A 177 REMARK 465 SER A 178 REMARK 465 PRO A 179 REMARK 465 THR A 180 REMARK 465 GLN A 181 REMARK 465 HIS A 182 REMARK 465 GLU A 183 REMARK 465 GLY A 218 REMARK 465 LYS A 219 REMARK 465 TYR A 220 REMARK 465 ALA A 221 REMARK 465 ALA A 222 REMARK 465 GLY A 223 REMARK 465 GLU A 224 REMARK 465 LEU A 225 REMARK 465 LYS A 226 REMARK 465 PRO A 227 REMARK 465 PRO A 228 REMARK 465 THR A 229 REMARK 465 ILE A 230 REMARK 465 ALA A 231 REMARK 465 SER A 232 REMARK 465 ARG A 233 REMARK 465 GLY A 234 REMARK 465 SER A 235 REMARK 465 GLY A 236 REMARK 465 LYS A 237 REMARK 465 HIS A 238 REMARK 465 PRO A 239 REMARK 465 GLN A 240 REMARK 465 LEU A 241 REMARK 465 MSE A 242 REMARK 465 PRO A 243 REMARK 465 SER A 244 REMARK 465 THR A 245 REMARK 465 PRO A 246 REMARK 465 ARG A 247 REMARK 465 TRP A 248 REMARK 465 ALA A 249 REMARK 465 ARG A 381 REMARK 465 ALA A 382 REMARK 465 PRO A 405 REMARK 465 PRO A 406 REMARK 465 LEU A 407 REMARK 465 SER A 408 REMARK 465 GLN A 409 REMARK 465 VAL A 410 REMARK 465 GLU A 411 REMARK 465 GLY A 412 REMARK 465 VAL A 413 REMARK 465 GLU A 414 REMARK 465 ILE A 415 REMARK 465 GLN A 416 REMARK 465 HIS A 417 REMARK 465 ALA A 418 REMARK 465 PRO A 419 REMARK 465 ILE A 420 REMARK 465 GLY A 421 REMARK 465 GLY A 422 REMARK 465 TYR A 423 REMARK 465 SER A 424 REMARK 465 SER A 425 REMARK 465 ASN A 426 REMARK 465 TYR A 427 REMARK 465 ARG A 428 REMARK 465 LYS A 429 REMARK 465 GLN A 430 REMARK 465 ILE A 431 REMARK 465 GLU A 432 REMARK 465 VAL A 433 REMARK 465 PRO A 434 REMARK 465 ALA A 435 REMARK 465 ALA A 436 REMARK 465 ILE A 473 REMARK 465 PRO A 474 REMARK 465 LEU A 475 REMARK 465 ASN A 476 REMARK 465 SER A 477 REMARK 465 SER A 478 REMARK 465 ALA A 479 REMARK 465 VAL A 480 REMARK 465 ASP A 481 REMARK 465 LEU A 482 REMARK 465 PRO A 483 REMARK 465 GLU A 484 REMARK 465 ILE A 485 REMARK 465 ILE A 486 REMARK 465 VAL A 487 REMARK 465 ALA A 488 REMARK 465 THR A 489 REMARK 465 PRO A 490 REMARK 465 LEU A 491 REMARK 465 GLN A 492 REMARK 465 ARG A 535 REMARK 465 THR A 536 REMARK 465 PHE A 537 REMARK 465 PRO A 538 REMARK 465 PRO A 539 REMARK 465 GLU A 540 REMARK 465 SER A 541 REMARK 465 SER A 542 REMARK 465 ARG A 543 REMARK 465 GLU A 544 REMARK 465 LEU A 545 REMARK 465 THR A 546 REMARK 465 ARG A 547 REMARK 465 LYS A 548 REMARK 465 ALA A 549 REMARK 465 ARG A 550 REMARK 465 SER A 551 REMARK 465 SER A 552 REMARK 465 PHE A 553 REMARK 465 THR A 554 REMARK 465 THR A 555 REMARK 465 ARG A 556 REMARK 465 SER A 557 REMARK 465 ALA A 558 REMARK 465 THR A 559 REMARK 465 LYS A 560 REMARK 465 ASN A 561 REMARK 465 LEU A 562 REMARK 465 GLU A 600 REMARK 465 ALA A 601 REMARK 465 GLN A 602 REMARK 465 SER A 603 REMARK 465 SER A 604 REMARK 465 GLY A 605 REMARK 465 SER A 606 REMARK 465 LYS A 607 REMARK 465 ARG A 608 REMARK 465 PRO A 609 REMARK 465 ARG A 610 REMARK 465 SER A 611 REMARK 465 GLU A 612 REMARK 465 TYR A 613 REMARK 465 ALA A 614 REMARK 465 SER A 615 REMARK 465 THR A 616 REMARK 465 THR A 617 REMARK 465 GLU A 618 REMARK 465 ASN A 619 REMARK 465 ILE A 620 REMARK 465 GLU A 621 REMARK 465 ALA A 622 REMARK 465 ASN A 623 REMARK 465 GLN A 624 REMARK 465 PRO A 625 REMARK 465 VAL A 626 REMARK 465 SER A 627 REMARK 465 ASN A 628 REMARK 465 ASN A 629 REMARK 465 GLN A 630 REMARK 465 THR A 631 REMARK 465 ALA A 632 REMARK 465 ASN A 633 REMARK 465 ARG A 634 REMARK 465 LYS A 635 REMARK 465 SER A 636 REMARK 465 ARG A 637 REMARK 465 ASN A 638 REMARK 465 VAL A 639 REMARK 465 LYS A 640 REMARK 465 GLY A 641 REMARK 465 GLN A 642 REMARK 465 TYR A 666 REMARK 465 PRO A 667 REMARK 465 MSE A 668 REMARK 465 ILE A 669 REMARK 465 SER A 670 REMARK 465 GLY A 671 REMARK 465 GLY A 672 REMARK 465 GLY A 673 REMARK 465 ASN A 674 REMARK 465 PHE A 675 REMARK 465 SER A 676 REMARK 465 ASN A 677 REMARK 465 SER A 678 REMARK 465 ALA A 679 REMARK 465 VAL A 680 REMARK 465 ALA A 681 REMARK 465 GLY A 682 REMARK 465 THR A 683 REMARK 465 ILE A 684 REMARK 465 THR A 685 REMARK 465 LYS A 686 REMARK 465 PRO A 687 REMARK 465 VAL A 688 REMARK 465 LYS A 689 REMARK 465 ILE A 690 REMARK 465 ASN A 691 REMARK 465 GLY A 692 REMARK 465 SER A 693 REMARK 465 SER A 694 REMARK 465 LYS A 695 REMARK 465 GLU A 696 REMARK 465 TYR A 697 REMARK 465 GLY A 698 REMARK 465 ALA A 699 REMARK 465 GLY A 700 REMARK 465 ILE A 701 REMARK 465 LYS A 722 REMARK 465 PRO A 723 REMARK 465 SER A 724 REMARK 465 SER A 725 REMARK 465 VAL A 726 REMARK 465 GLY A 727 REMARK 465 THR A 728 REMARK 465 PRO A 729 REMARK 465 TRP A 730 REMARK 465 SER A 731 REMARK 465 TYR A 732 REMARK 465 SER A 733 REMARK 465 SER A 734 REMARK 465 SER A 735 REMARK 465 GLU A 736 REMARK 465 ILE A 737 REMARK 465 VAL A 738 REMARK 465 VAL A 790 REMARK 465 VAL A 791 REMARK 465 ALA A 792 REMARK 465 SER A 793 REMARK 465 ILE A 794 REMARK 465 VAL A 795 REMARK 465 ASP A 796 REMARK 465 LYS A 797 REMARK 465 ALA A 798 REMARK 465 GLU A 799 REMARK 465 PRO A 800 REMARK 465 LEU A 801 REMARK 465 GLU A 802 REMARK 465 ALA A 803 REMARK 465 TYR A 804 REMARK 465 LEU A 805 REMARK 465 LYS A 806 REMARK 465 ASN A 807 REMARK 465 THR A 808 REMARK 465 PRO A 809 REMARK 465 VAL A 810 REMARK 465 GLN A 811 REMARK 465 LYS A 812 REMARK 465 ASP A 813 REMARK 465 GLY B 27 REMARK 465 SER B 28 REMARK 465 ASN B 29 REMARK 465 GLY B 30 REMARK 465 ALA B 31 REMARK 465 ILE B 32 REMARK 465 PRO B 33 REMARK 465 PHE B 34 REMARK 465 PRO B 35 REMARK 465 VAL B 36 REMARK 465 GLY B 37 REMARK 465 SER B 38 REMARK 465 LEU B 39 REMARK 465 PRO B 40 REMARK 465 GLY B 41 REMARK 465 THR B 42 REMARK 465 ALA B 43 REMARK 465 ARG B 88 REMARK 465 GLY B 89 REMARK 465 PRO B 90 REMARK 465 PHE B 91 REMARK 465 THR B 92 REMARK 465 LYS B 93 REMARK 465 ARG B 94 REMARK 465 ALA B 158 REMARK 465 LYS B 159 REMARK 465 ILE B 160 REMARK 465 ASP B 161 REMARK 465 LEU B 162 REMARK 465 GLY B 163 REMARK 465 PRO B 164 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 17 OH TYR A 37 2.08 REMARK 500 OH TYR A 102 OD2 ASP A 196 2.08 REMARK 500 OH TYR A 61 OD1 ASP A 70 2.09 REMARK 500 OE1 GLU A 662 ND2 ASN B 63 2.10 REMARK 500 O ASP B 56 ND2 ASN B 81 2.13 REMARK 500 CZ ARG B 83 O2P FMN B 201 2.14 REMARK 500 O VAL A 595 OG SER A 598 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 39 NH2 ARG A 144 6655 2.16 REMARK 500 O GLY A 13 NH2 ARG A 184 6655 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 44 -79.91 -85.67 REMARK 500 GLU A 329 31.41 -99.44 REMARK 500 PHE A 370 -65.60 -128.31 REMARK 500 TYR A 470 41.33 -95.84 REMARK 500 LEU A 576 -18.95 -142.34 REMARK 500 SER A 578 63.58 60.45 REMARK 500 ALA A 580 -151.61 -140.31 REMARK 500 GLU B 142 -44.27 -133.74 REMARK 500 REMARK 500 REMARK: NULL DBREF 7WA4 A 1 813 UNP Q9SQI2 GIGAN_ARATH 1 813 DBREF 7WA4 B 29 164 UNP Q8W420 ADO2_ARATH 29 164 SEQADV 7WA4 GLY A -1 UNP Q9SQI2 EXPRESSION TAG SEQADV 7WA4 SER A 0 UNP Q9SQI2 EXPRESSION TAG SEQADV 7WA4 GLY B 27 UNP Q8W420 EXPRESSION TAG SEQADV 7WA4 SER B 28 UNP Q8W420 EXPRESSION TAG SEQRES 1 A 815 GLY SER MSE ALA SER SER SER SER SER GLU ARG TRP ILE SEQRES 2 A 815 ASP GLY LEU GLN PHE SER SER LEU LEU TRP PRO PRO PRO SEQRES 3 A 815 ARG ASP PRO GLN GLN HIS LYS ASP GLN VAL VAL ALA TYR SEQRES 4 A 815 VAL GLU TYR PHE GLY GLN PHE THR SER GLU GLN PHE PRO SEQRES 5 A 815 ASP ASP ILE ALA GLU LEU VAL ARG HIS GLN TYR PRO SER SEQRES 6 A 815 THR GLU LYS ARG LEU LEU ASP ASP VAL LEU ALA MSE PHE SEQRES 7 A 815 VAL LEU HIS HIS PRO GLU HIS GLY HIS ALA VAL ILE LEU SEQRES 8 A 815 PRO ILE ILE SER CYS LEU ILE ASP GLY SER LEU VAL TYR SEQRES 9 A 815 SER LYS GLU ALA HIS PRO PHE ALA SER PHE ILE SER LEU SEQRES 10 A 815 VAL CYS PRO SER SER GLU ASN ASP TYR SER GLU GLN TRP SEQRES 11 A 815 ALA LEU ALA CYS GLY GLU ILE LEU ARG ILE LEU THR HIS SEQRES 12 A 815 TYR ASN ARG PRO ILE TYR LYS THR GLU GLN GLN ASN GLY SEQRES 13 A 815 ASP THR GLU ARG ASN CYS LEU SER LYS ALA THR THR SER SEQRES 14 A 815 GLY SER PRO THR SER GLU PRO LYS ALA GLY SER PRO THR SEQRES 15 A 815 GLN HIS GLU ARG LYS PRO LEU ARG PRO LEU SER PRO TRP SEQRES 16 A 815 ILE SER ASP ILE LEU LEU ALA ALA PRO LEU GLY ILE ARG SEQRES 17 A 815 SER ASP TYR PHE ARG TRP CYS SER GLY VAL MSE GLY LYS SEQRES 18 A 815 TYR ALA ALA GLY GLU LEU LYS PRO PRO THR ILE ALA SER SEQRES 19 A 815 ARG GLY SER GLY LYS HIS PRO GLN LEU MSE PRO SER THR SEQRES 20 A 815 PRO ARG TRP ALA VAL ALA ASN GLY ALA GLY VAL ILE LEU SEQRES 21 A 815 SER VAL CYS ASP ASP GLU VAL ALA ARG TYR GLU THR ALA SEQRES 22 A 815 THR LEU THR ALA VAL ALA VAL PRO ALA LEU LEU LEU PRO SEQRES 23 A 815 PRO PRO THR THR SER LEU ASP GLU HIS LEU VAL ALA GLY SEQRES 24 A 815 LEU PRO ALA LEU GLU PRO TYR ALA ARG LEU PHE HIS ARG SEQRES 25 A 815 TYR TYR ALA ILE ALA THR PRO SER ALA THR GLN ARG LEU SEQRES 26 A 815 LEU LEU GLY LEU LEU GLU ALA PRO PRO SER TRP ALA PRO SEQRES 27 A 815 ASP ALA LEU ASP ALA ALA VAL GLN LEU VAL GLU LEU LEU SEQRES 28 A 815 ARG ALA ALA GLU ASP TYR ALA SER GLY VAL ARG LEU PRO SEQRES 29 A 815 ARG ASN TRP MSE HIS LEU HIS PHE LEU ARG ALA ILE GLY SEQRES 30 A 815 ILE ALA MSE SER MSE ARG ALA GLY VAL ALA ALA ASP ALA SEQRES 31 A 815 ALA ALA ALA LEU LEU PHE ARG ILE LEU SER GLN PRO ALA SEQRES 32 A 815 LEU LEU PHE PRO PRO LEU SER GLN VAL GLU GLY VAL GLU SEQRES 33 A 815 ILE GLN HIS ALA PRO ILE GLY GLY TYR SER SER ASN TYR SEQRES 34 A 815 ARG LYS GLN ILE GLU VAL PRO ALA ALA GLU ALA THR ILE SEQRES 35 A 815 GLU ALA THR ALA GLN GLY ILE ALA SER MSE LEU CYS ALA SEQRES 36 A 815 HIS GLY PRO GLU VAL GLU TRP ARG ILE CYS THR ILE TRP SEQRES 37 A 815 GLU ALA ALA TYR GLY LEU ILE PRO LEU ASN SER SER ALA SEQRES 38 A 815 VAL ASP LEU PRO GLU ILE ILE VAL ALA THR PRO LEU GLN SEQRES 39 A 815 PRO PRO ILE LEU SER TRP ASN LEU TYR ILE PRO LEU LEU SEQRES 40 A 815 LYS VAL LEU GLU TYR LEU PRO ARG GLY SER PRO SER GLU SEQRES 41 A 815 ALA CYS LEU MSE LYS ILE PHE VAL ALA THR VAL GLU THR SEQRES 42 A 815 ILE LEU SER ARG THR PHE PRO PRO GLU SER SER ARG GLU SEQRES 43 A 815 LEU THR ARG LYS ALA ARG SER SER PHE THR THR ARG SER SEQRES 44 A 815 ALA THR LYS ASN LEU ALA MSE SER GLU LEU ARG ALA MSE SEQRES 45 A 815 VAL HIS ALA LEU PHE LEU GLU SER CYS ALA GLY VAL GLU SEQRES 46 A 815 LEU ALA SER ARG LEU LEU PHE VAL VAL LEU THR VAL CYS SEQRES 47 A 815 VAL SER HIS GLU ALA GLN SER SER GLY SER LYS ARG PRO SEQRES 48 A 815 ARG SER GLU TYR ALA SER THR THR GLU ASN ILE GLU ALA SEQRES 49 A 815 ASN GLN PRO VAL SER ASN ASN GLN THR ALA ASN ARG LYS SEQRES 50 A 815 SER ARG ASN VAL LYS GLY GLN GLY PRO VAL ALA ALA PHE SEQRES 51 A 815 ASP SER TYR VAL LEU ALA ALA VAL CYS ALA LEU ALA CYS SEQRES 52 A 815 GLU VAL GLN LEU TYR PRO MSE ILE SER GLY GLY GLY ASN SEQRES 53 A 815 PHE SER ASN SER ALA VAL ALA GLY THR ILE THR LYS PRO SEQRES 54 A 815 VAL LYS ILE ASN GLY SER SER LYS GLU TYR GLY ALA GLY SEQRES 55 A 815 ILE ASP SER ALA ILE SER HIS THR ARG ARG ILE LEU ALA SEQRES 56 A 815 ILE LEU GLU ALA LEU PHE SER LEU LYS PRO SER SER VAL SEQRES 57 A 815 GLY THR PRO TRP SER TYR SER SER SER GLU ILE VAL ALA SEQRES 58 A 815 ALA ALA MSE VAL ALA ALA HIS ILE SER GLU LEU PHE ARG SEQRES 59 A 815 ARG SER LYS ALA LEU THR HIS ALA LEU SER GLY LEU MSE SEQRES 60 A 815 ARG CYS LYS TRP ASP LYS GLU ILE HIS LYS ARG ALA SER SEQRES 61 A 815 SER LEU TYR ASN LEU ILE ASP VAL HIS SER LYS VAL VAL SEQRES 62 A 815 ALA SER ILE VAL ASP LYS ALA GLU PRO LEU GLU ALA TYR SEQRES 63 A 815 LEU LYS ASN THR PRO VAL GLN LYS ASP SEQRES 1 B 138 GLY SER ASN GLY ALA ILE PRO PHE PRO VAL GLY SER LEU SEQRES 2 B 138 PRO GLY THR ALA PRO CYS GLY PHE VAL VAL SER ASP ALA SEQRES 3 B 138 LEU GLU PRO ASP ASN PRO ILE ILE TYR VAL ASN THR VAL SEQRES 4 B 138 PHE GLU ILE VAL THR GLY TYR ARG ALA GLU GLU VAL ILE SEQRES 5 B 138 GLY ARG ASN CYS ARG PHE LEU GLN CYS ARG GLY PRO PHE SEQRES 6 B 138 THR LYS ARG ARG HIS PRO MET VAL ASP SER THR ILE VAL SEQRES 7 B 138 ALA LYS MET ARG GLN CYS LEU GLU ASN GLY ILE GLU PHE SEQRES 8 B 138 GLN GLY GLU LEU LEU ASN PHE ARG LYS ASP GLY SER PRO SEQRES 9 B 138 LEU MET ASN LYS LEU ARG LEU VAL PRO ILE ARG GLU GLU SEQRES 10 B 138 ASP GLU ILE THR HIS PHE ILE GLY VAL LEU LEU PHE THR SEQRES 11 B 138 ASP ALA LYS ILE ASP LEU GLY PRO MODRES 7WA4 MSE A 75 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 217 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 366 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 378 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 380 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 450 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 522 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 564 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 570 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 742 MET MODIFIED RESIDUE MODRES 7WA4 MSE A 765 MET MODIFIED RESIDUE HET MSE A 75 8 HET MSE A 217 8 HET MSE A 366 8 HET MSE A 378 8 HET MSE A 380 8 HET MSE A 450 8 HET MSE A 522 8 HET MSE A 564 8 HET MSE A 570 8 HET MSE A 742 8 HET MSE A 765 8 HET FMN B 201 31 HETNAM MSE SELENOMETHIONINE HETNAM FMN FLAVIN MONONUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 3 FMN C17 H21 N4 O9 P HELIX 1 AA1 ARG A 9 LEU A 14 1 6 HELIX 2 AA2 GLN A 15 TRP A 21 5 7 HELIX 3 AA3 ASP A 26 GLN A 43 1 18 HELIX 4 AA4 GLN A 48 TYR A 61 1 14 HELIX 5 AA5 ARG A 67 HIS A 80 1 14 HELIX 6 AA6 HIS A 83 GLY A 98 1 16 HELIX 7 AA7 ALA A 106 CYS A 117 1 12 HELIX 8 AA8 GLU A 126 TYR A 142 1 17 HELIX 9 AA9 LEU A 190 ALA A 200 1 11 HELIX 10 AB1 PRO A 202 SER A 214 1 13 HELIX 11 AB2 ASN A 252 TYR A 268 1 17 HELIX 12 AB3 THR A 272 LEU A 283 1 12 HELIX 13 AB4 SER A 289 VAL A 295 1 7 HELIX 14 AB5 TYR A 304 ALA A 315 1 12 HELIX 15 AB6 THR A 316 GLU A 329 1 14 HELIX 16 AB7 ASP A 337 ALA A 356 1 20 HELIX 17 AB8 ASN A 364 PHE A 370 1 7 HELIX 18 AB9 PHE A 370 MSE A 380 1 11 HELIX 19 AC1 VAL A 384 GLN A 399 1 16 HELIX 20 AC2 ALA A 438 GLY A 455 1 18 HELIX 21 AC3 GLY A 455 TYR A 470 1 16 HELIX 22 AC4 SER A 497 LEU A 511 1 15 HELIX 23 AC5 SER A 515 SER A 534 1 20 HELIX 24 AC6 SER A 565 GLU A 577 1 13 HELIX 25 AC7 GLY A 581 HIS A 599 1 19 HELIX 26 AC8 PRO A 644 LEU A 665 1 22 HELIX 27 AC9 SER A 703 LEU A 721 1 19 HELIX 28 AD1 ALA A 740 ARG A 752 1 13 HELIX 29 AD2 SER A 754 ARG A 766 1 13 HELIX 30 AD3 ASP A 770 LYS A 789 1 20 HELIX 31 AD4 ASN B 63 GLY B 71 1 9 HELIX 32 AD5 ARG B 73 ILE B 78 1 6 HELIX 33 AD6 ASN B 81 LEU B 85 5 5 HELIX 34 AD7 ASP B 100 GLY B 114 1 15 SHEET 1 AA1 5 ILE B 59 VAL B 62 0 SHEET 2 AA1 5 GLY B 46 ASP B 51 -1 N VAL B 49 O ILE B 60 SHEET 3 AA1 5 ILE B 146 THR B 156 -1 O LEU B 153 N GLY B 46 SHEET 4 AA1 5 PRO B 130 ARG B 141 -1 N MET B 132 O THR B 156 SHEET 5 AA1 5 PHE B 117 PHE B 124 -1 N ASN B 123 O LEU B 131 LINK C ALA A 74 N MSE A 75 1555 1555 1.33 LINK C MSE A 75 N PHE A 76 1555 1555 1.34 LINK C VAL A 216 N MSE A 217 1555 1555 1.33 LINK C TRP A 365 N MSE A 366 1555 1555 1.33 LINK C MSE A 366 N HIS A 367 1555 1555 1.33 LINK C ALA A 377 N MSE A 378 1555 1555 1.33 LINK C MSE A 378 N SER A 379 1555 1555 1.34 LINK C SER A 379 N MSE A 380 1555 1555 1.33 LINK C SER A 449 N MSE A 450 1555 1555 1.33 LINK C MSE A 450 N LEU A 451 1555 1555 1.34 LINK C LEU A 521 N MSE A 522 1555 1555 1.33 LINK C MSE A 522 N LYS A 523 1555 1555 1.34 LINK C ALA A 563 N MSE A 564 1555 1555 1.33 LINK C MSE A 564 N SER A 565 1555 1555 1.33 LINK C ALA A 569 N MSE A 570 1555 1555 1.33 LINK C MSE A 570 N VAL A 571 1555 1555 1.34 LINK C ALA A 741 N MSE A 742 1555 1555 1.34 LINK C MSE A 742 N VAL A 743 1555 1555 1.34 LINK C LEU A 764 N MSE A 765 1555 1555 1.33 LINK C MSE A 765 N ARG A 766 1555 1555 1.34 LINK NH1 ARG B 83 O2P FMN B 201 1555 1555 1.30 CISPEP 1 TYR A 61 PRO A 62 0 2.04 CISPEP 2 CYS A 579 ALA A 580 0 0.08 CISPEP 3 GLU B 143 ASP B 144 0 4.33 CRYST1 104.750 104.750 232.161 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009547 0.005512 0.000000 0.00000 SCALE2 0.000000 0.011023 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004307 0.00000