HEADER RNA BINDING PROTEIN 24-DEC-21 7WEZ TITLE CRYSTAL STRUCTURE OF RRM DOMAIN OF CYCLOPHILIN 33-LIKE PROTEIN OF TITLE 2 PLASMODIUM FALCIPARUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-BINDING PROTEIN, PUTATIVE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM 3D7; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: PF3D7_1320900; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NUCLEIC ACID-BINDING PROTEIN CONTAINING CONSERVED RNA MOTIFS, RNA KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.VERMA,N.S.BHAVESH REVDAT 2 29-NOV-23 7WEZ 1 REMARK REVDAT 1 28-DEC-22 7WEZ 0 JRNL AUTH G.VERMA,N.S.BHAVESH JRNL TITL CRYSTAL STRUCTURE OF RRM DOMAIN OF CYCLOPHILIN 33-LIKE JRNL TITL 2 PROTEIN OF PLASMODIUM FALCIPARUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 23644 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1202 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1766 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2464 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.80000 REMARK 3 B22 (A**2) : 2.35000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.80000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.195 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.180 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.142 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.924 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2509 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2268 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3393 ; 1.560 ; 1.637 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5169 ; 1.365 ; 1.589 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 316 ; 6.648 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 142 ;34.246 ;23.662 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 395 ;16.802 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;22.166 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 338 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2956 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 612 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1274 ; 3.182 ; 3.542 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1273 ; 3.172 ; 3.538 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1584 ; 4.651 ; 5.282 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1585 ; 4.651 ; 5.285 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1235 ; 3.540 ; 3.840 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1235 ; 3.540 ; 3.840 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1809 ; 5.473 ; 5.635 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2716 ; 7.512 ;41.952 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2692 ; 7.468 ;41.748 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7WEZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300025599. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24799 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 5.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.57300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3MDF REMARK 200 REMARK 200 REMARK: TETRAGONAL BIPYRAMIDAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE HEXAHYDRATE, REMARK 280 0.1 M TRIS HYDROCHLORIDE PH 8.5 AND 30 % (W/V) PEG 4000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.23450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.40100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.23450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.40100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 ASP A 1 REMARK 465 ASN A 2 REMARK 465 ASN A 3 REMARK 465 THR A 84 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 HIS B -2 REMARK 465 MET B -1 REMARK 465 SER B 0 REMARK 465 ASP B 1 REMARK 465 ASN B 2 REMARK 465 ASN B 3 REMARK 465 THR B 84 REMARK 465 GLY C -4 REMARK 465 SER C -3 REMARK 465 HIS C -2 REMARK 465 MET C -1 REMARK 465 SER C 0 REMARK 465 ASP C 1 REMARK 465 ASN C 2 REMARK 465 ASN C 3 REMARK 465 THR C 84 REMARK 465 GLY D -4 REMARK 465 SER D -3 REMARK 465 HIS D -2 REMARK 465 MET D -1 REMARK 465 SER D 0 REMARK 465 ASP D 1 REMARK 465 ASN D 2 REMARK 465 ASN D 3 REMARK 465 THR D 84 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 GLU B 15 CD OE1 OE2 REMARK 470 THR B 16 CG2 REMARK 470 LYS B 20 CG CD CE NZ REMARK 470 SER B 21 OG REMARK 470 THR B 42 O OG1 CG2 REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 LYS B 45 CD CE NZ REMARK 470 TYR B 65 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 THR C 16 OG1 CG2 REMARK 470 ASP C 18 CG OD1 OD2 REMARK 470 LYS C 20 CG CD CE NZ REMARK 470 SER C 21 OG REMARK 470 MET C 41 CG SD CE REMARK 470 THR C 42 O OG1 CG2 REMARK 470 THR C 43 OG1 CG2 REMARK 470 LYS C 44 CG CD CE NZ REMARK 470 LYS C 45 CE NZ REMARK 470 LYS C 61 CD CE NZ REMARK 470 TYR C 65 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS D 20 CE NZ REMARK 470 TYR D 23 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP D 31 CG OD1 OD2 REMARK 470 ILE D 35 CD1 REMARK 470 GLU D 36 CG CD OE1 OE2 REMARK 470 LYS D 44 CE NZ REMARK 470 GLU D 53 CG CD OE1 OE2 REMARK 470 TYR D 54 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL D 55 CG1 REMARK 470 VAL D 57 CG1 CG2 REMARK 470 ASP D 58 CG OD1 OD2 REMARK 470 ALA D 60 CB REMARK 470 LYS D 61 CG CD CE NZ REMARK 470 HIS D 62 CG ND1 CD2 CE1 NE2 REMARK 470 ASN D 80 CG OD1 ND2 REMARK 470 TYR D 81 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 18 -169.93 -128.13 REMARK 500 ASN C 73 47.33 37.44 REMARK 500 LYS D 44 27.17 49.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 264 DISTANCE = 6.33 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 6 OD2 REMARK 620 2 HOH A 203 O 86.2 REMARK 620 3 HOH A 206 O 84.3 92.5 REMARK 620 4 HOH A 215 O 87.7 173.8 87.9 REMARK 620 5 HOH A 216 O 94.4 88.6 178.2 90.8 REMARK 620 6 HOH A 224 O 171.0 101.2 90.1 85.0 91.0 REMARK 620 N 1 2 3 4 5 DBREF 7WEZ A -1 84 UNP C0H5C7 C0H5C7_PLAF7 1 86 DBREF 7WEZ B -1 84 UNP C0H5C7 C0H5C7_PLAF7 1 86 DBREF 7WEZ C -1 84 UNP C0H5C7 C0H5C7_PLAF7 1 86 DBREF 7WEZ D -1 84 UNP C0H5C7 C0H5C7_PLAF7 1 86 SEQADV 7WEZ GLY A -4 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ SER A -3 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ HIS A -2 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ GLY B -4 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ SER B -3 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ HIS B -2 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ GLY C -4 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ SER C -3 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ HIS C -2 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ GLY D -4 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ SER D -3 UNP C0H5C7 EXPRESSION TAG SEQADV 7WEZ HIS D -2 UNP C0H5C7 EXPRESSION TAG SEQRES 1 A 89 GLY SER HIS MET SER ASP ASN ASN ALA THR ASP ILE LEU SEQRES 2 A 89 PHE VAL GLY GLY ILE ASP GLU THR ILE ASP GLU LYS SER SEQRES 3 A 89 LEU TYR ASP ILE PHE SER SER PHE GLY ASP ILE ARG ASN SEQRES 4 A 89 ILE GLU VAL PRO LEU ASN MET THR THR LYS LYS ASN ARG SEQRES 5 A 89 GLY PHE ALA PHE VAL GLU TYR VAL GLU VAL ASP ASP ALA SEQRES 6 A 89 LYS HIS ALA LEU TYR ASN MET ASN ASN PHE GLU LEU ASN SEQRES 7 A 89 GLY LYS ARG ILE HIS VAL ASN TYR SER LYS THR SEQRES 1 B 89 GLY SER HIS MET SER ASP ASN ASN ALA THR ASP ILE LEU SEQRES 2 B 89 PHE VAL GLY GLY ILE ASP GLU THR ILE ASP GLU LYS SER SEQRES 3 B 89 LEU TYR ASP ILE PHE SER SER PHE GLY ASP ILE ARG ASN SEQRES 4 B 89 ILE GLU VAL PRO LEU ASN MET THR THR LYS LYS ASN ARG SEQRES 5 B 89 GLY PHE ALA PHE VAL GLU TYR VAL GLU VAL ASP ASP ALA SEQRES 6 B 89 LYS HIS ALA LEU TYR ASN MET ASN ASN PHE GLU LEU ASN SEQRES 7 B 89 GLY LYS ARG ILE HIS VAL ASN TYR SER LYS THR SEQRES 1 C 89 GLY SER HIS MET SER ASP ASN ASN ALA THR ASP ILE LEU SEQRES 2 C 89 PHE VAL GLY GLY ILE ASP GLU THR ILE ASP GLU LYS SER SEQRES 3 C 89 LEU TYR ASP ILE PHE SER SER PHE GLY ASP ILE ARG ASN SEQRES 4 C 89 ILE GLU VAL PRO LEU ASN MET THR THR LYS LYS ASN ARG SEQRES 5 C 89 GLY PHE ALA PHE VAL GLU TYR VAL GLU VAL ASP ASP ALA SEQRES 6 C 89 LYS HIS ALA LEU TYR ASN MET ASN ASN PHE GLU LEU ASN SEQRES 7 C 89 GLY LYS ARG ILE HIS VAL ASN TYR SER LYS THR SEQRES 1 D 89 GLY SER HIS MET SER ASP ASN ASN ALA THR ASP ILE LEU SEQRES 2 D 89 PHE VAL GLY GLY ILE ASP GLU THR ILE ASP GLU LYS SER SEQRES 3 D 89 LEU TYR ASP ILE PHE SER SER PHE GLY ASP ILE ARG ASN SEQRES 4 D 89 ILE GLU VAL PRO LEU ASN MET THR THR LYS LYS ASN ARG SEQRES 5 D 89 GLY PHE ALA PHE VAL GLU TYR VAL GLU VAL ASP ASP ALA SEQRES 6 D 89 LYS HIS ALA LEU TYR ASN MET ASN ASN PHE GLU LEU ASN SEQRES 7 D 89 GLY LYS ARG ILE HIS VAL ASN TYR SER LYS THR HET MG A 101 1 HETNAM MG MAGNESIUM ION FORMUL 5 MG MG 2+ FORMUL 6 HOH *160(H2 O) HELIX 1 AA1 ASP A 18 SER A 27 1 10 HELIX 2 AA2 SER A 28 GLY A 30 5 3 HELIX 3 AA3 GLU A 56 ASN A 68 1 13 HELIX 4 AA4 ASP B 18 SER B 28 1 11 HELIX 5 AA5 GLU B 56 ASN B 68 1 13 HELIX 6 AA6 ASP C 18 SER C 27 1 10 HELIX 7 AA7 SER C 28 GLY C 30 5 3 HELIX 8 AA8 GLU C 56 ASN C 68 1 13 HELIX 9 AA9 ASP D 18 SER D 28 1 11 HELIX 10 AB1 GLU D 56 ASN D 68 1 13 SHEET 1 AA1 4 ILE A 32 GLU A 36 0 SHEET 2 AA1 4 PHE A 49 TYR A 54 -1 O GLU A 53 N ASN A 34 SHEET 3 AA1 4 ILE A 7 GLY A 11 -1 N VAL A 10 O ALA A 50 SHEET 4 AA1 4 HIS A 78 TYR A 81 -1 O ASN A 80 N PHE A 9 SHEET 1 AA2 2 GLU A 71 LEU A 72 0 SHEET 2 AA2 2 LYS A 75 ARG A 76 -1 O LYS A 75 N LEU A 72 SHEET 1 AA3 4 ILE B 32 GLU B 36 0 SHEET 2 AA3 4 PHE B 49 TYR B 54 -1 O GLU B 53 N ASN B 34 SHEET 3 AA3 4 ILE B 7 GLY B 11 -1 N LEU B 8 O VAL B 52 SHEET 4 AA3 4 HIS B 78 TYR B 81 -1 O ASN B 80 N PHE B 9 SHEET 1 AA4 2 LEU B 39 ASN B 40 0 SHEET 2 AA4 2 LYS B 45 ASN B 46 -1 O LYS B 45 N ASN B 40 SHEET 1 AA5 2 GLU B 71 LEU B 72 0 SHEET 2 AA5 2 LYS B 75 ARG B 76 -1 O LYS B 75 N LEU B 72 SHEET 1 AA6 4 ILE C 32 GLU C 36 0 SHEET 2 AA6 4 ALA C 50 TYR C 54 -1 O GLU C 53 N ASN C 34 SHEET 3 AA6 4 ILE C 7 GLY C 11 -1 N VAL C 10 O ALA C 50 SHEET 4 AA6 4 HIS C 78 TYR C 81 -1 O HIS C 78 N GLY C 11 SHEET 1 AA7 2 GLU C 71 LEU C 72 0 SHEET 2 AA7 2 LYS C 75 ARG C 76 -1 O LYS C 75 N LEU C 72 SHEET 1 AA8 4 ILE D 32 GLU D 36 0 SHEET 2 AA8 4 PHE D 49 TYR D 54 -1 O PHE D 51 N GLU D 36 SHEET 3 AA8 4 ILE D 7 GLY D 11 -1 N LEU D 8 O VAL D 52 SHEET 4 AA8 4 HIS D 78 TYR D 81 -1 O HIS D 78 N GLY D 11 SHEET 1 AA9 2 LEU D 39 ASN D 40 0 SHEET 2 AA9 2 LYS D 45 ASN D 46 -1 O LYS D 45 N ASN D 40 SHEET 1 AB1 2 GLU D 71 LEU D 72 0 SHEET 2 AB1 2 LYS D 75 ARG D 76 -1 O LYS D 75 N LEU D 72 LINK OD2 ASP A 6 MG MG A 101 1555 1555 2.11 LINK MG MG A 101 O HOH A 203 1555 1555 2.17 LINK MG MG A 101 O HOH A 206 1555 1555 2.32 LINK MG MG A 101 O HOH A 215 1555 4947 2.14 LINK MG MG A 101 O HOH A 216 1555 4947 2.05 LINK MG MG A 101 O HOH A 224 1555 4947 2.13 CRYST1 90.469 40.802 97.387 90.00 115.57 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011054 0.000000 0.005289 0.00000 SCALE2 0.000000 0.024509 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011383 0.00000