HEADER ONCOPROTEIN 26-DEC-21 7WF5 TITLE C-SRC IN COMPLEX WITH PONATINIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTO-ONCOGENE C-SRC,PP60C-SRC,P60-SRC; COMPND 5 EC: 2.7.10.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: SRC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR, KINASE, ONCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.GUO,Y.DUAN,S.DAI,X.CHEN,Y.CHEN REVDAT 2 29-NOV-23 7WF5 1 REMARK REVDAT 1 02-MAR-22 7WF5 0 JRNL AUTH M.GUO,Y.DUAN,S.DAI,J.LI,X.CHEN,L.QU,Z.CHEN,H.WEI,L.JIANG, JRNL AUTH 2 Y.CHEN JRNL TITL STRUCTURAL STUDY OF PONATINIB IN INHIBITING SRC KINASE. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 598 15 2022 JRNL REFN ESSN 1090-2104 JRNL PMID 35151199 JRNL DOI 10.1016/J.BBRC.2022.02.001 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 68018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2010 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.9090 - 4.3292 0.98 4781 141 0.1420 0.1382 REMARK 3 2 4.3292 - 3.4377 0.98 4759 144 0.1375 0.1480 REMARK 3 3 3.4377 - 3.0036 0.98 4789 149 0.1544 0.1690 REMARK 3 4 3.0036 - 2.7291 0.98 4772 147 0.1672 0.1891 REMARK 3 5 2.7291 - 2.5336 0.98 4751 146 0.1667 0.2083 REMARK 3 6 2.5336 - 2.3843 0.98 4788 144 0.1659 0.1731 REMARK 3 7 2.3843 - 2.2649 0.97 4721 142 0.1613 0.1945 REMARK 3 8 2.2649 - 2.1664 0.97 4764 147 0.1683 0.2074 REMARK 3 9 2.1664 - 2.0830 0.97 4672 145 0.1621 0.2406 REMARK 3 10 2.0830 - 2.0111 0.97 4722 140 0.1792 0.1900 REMARK 3 11 2.0111 - 1.9482 0.97 4760 149 0.1942 0.2284 REMARK 3 12 1.9482 - 1.8926 0.96 4665 140 0.2188 0.2558 REMARK 3 13 1.8926 - 1.8427 0.96 4679 144 0.2394 0.2865 REMARK 3 14 1.8427 - 1.7980 0.90 4385 132 0.2645 0.3154 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.65 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 257 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2613 37.6221 -21.1419 REMARK 3 T TENSOR REMARK 3 T11: 0.5258 T22: 0.3346 REMARK 3 T33: 0.1348 T12: -0.0249 REMARK 3 T13: 0.0034 T23: 0.0476 REMARK 3 L TENSOR REMARK 3 L11: 1.5647 L22: 2.9370 REMARK 3 L33: 5.6330 L12: 0.6293 REMARK 3 L13: 0.5609 L23: 0.0472 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: 0.3435 S13: 0.1240 REMARK 3 S21: -0.7847 S22: 0.1280 S23: 0.0667 REMARK 3 S31: 0.1206 S32: -0.2353 S33: 0.0188 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9279 41.8495 -12.5098 REMARK 3 T TENSOR REMARK 3 T11: 0.3876 T22: 0.3084 REMARK 3 T33: 0.1984 T12: -0.0075 REMARK 3 T13: -0.0104 T23: 0.0469 REMARK 3 L TENSOR REMARK 3 L11: 4.1425 L22: 3.1457 REMARK 3 L33: 3.1961 L12: -2.8255 REMARK 3 L13: -1.7367 L23: -0.5633 REMARK 3 S TENSOR REMARK 3 S11: -0.1120 S12: -0.2389 S13: 0.4684 REMARK 3 S21: -0.2461 S22: 0.2980 S23: -0.0378 REMARK 3 S31: -0.2690 S32: -0.2095 S33: 0.0477 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 290 THROUGH 303 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9770 41.6103 -14.5728 REMARK 3 T TENSOR REMARK 3 T11: 0.3777 T22: 0.3343 REMARK 3 T33: 0.2981 T12: -0.0219 REMARK 3 T13: 0.0171 T23: 0.1102 REMARK 3 L TENSOR REMARK 3 L11: 2.3216 L22: 5.4757 REMARK 3 L33: 5.3802 L12: 0.3887 REMARK 3 L13: 0.4993 L23: -0.2356 REMARK 3 S TENSOR REMARK 3 S11: -0.1703 S12: 0.1295 S13: 0.7157 REMARK 3 S21: -0.2470 S22: -0.0296 S23: -0.4450 REMARK 3 S31: -0.2705 S32: 0.5517 S33: -0.0387 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 304 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7018 31.0979 -14.8045 REMARK 3 T TENSOR REMARK 3 T11: 0.4761 T22: 0.3557 REMARK 3 T33: 0.2395 T12: 0.0522 REMARK 3 T13: 0.1121 T23: 0.0248 REMARK 3 L TENSOR REMARK 3 L11: 1.2399 L22: 1.7445 REMARK 3 L33: 3.6048 L12: -0.4225 REMARK 3 L13: 0.2099 L23: -1.1762 REMARK 3 S TENSOR REMARK 3 S11: 0.0655 S12: 0.3852 S13: 0.1151 REMARK 3 S21: -0.8971 S22: -0.1765 S23: -0.3734 REMARK 3 S31: 0.4127 S32: 0.4006 S33: 0.1042 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 335 THROUGH 359 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5992 36.6806 2.6458 REMARK 3 T TENSOR REMARK 3 T11: 0.1323 T22: 0.1637 REMARK 3 T33: 0.1953 T12: 0.0338 REMARK 3 T13: -0.0046 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.4720 L22: 2.5763 REMARK 3 L33: 3.5812 L12: 0.1642 REMARK 3 L13: 0.1070 L23: -1.0185 REMARK 3 S TENSOR REMARK 3 S11: 0.0840 S12: 0.0728 S13: 0.2842 REMARK 3 S21: -0.0895 S22: 0.0765 S23: 0.2112 REMARK 3 S31: -0.0433 S32: -0.2672 S33: -0.0618 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 360 THROUGH 456 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6725 28.6307 4.4246 REMARK 3 T TENSOR REMARK 3 T11: 0.1590 T22: 0.1349 REMARK 3 T33: 0.1553 T12: 0.0087 REMARK 3 T13: 0.0401 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.9741 L22: 1.8840 REMARK 3 L33: 2.1959 L12: -0.1318 REMARK 3 L13: 0.0167 L23: -0.2576 REMARK 3 S TENSOR REMARK 3 S11: -0.0454 S12: 0.1200 S13: 0.0454 REMARK 3 S21: -0.2005 S22: -0.0177 S23: -0.2298 REMARK 3 S31: 0.0531 S32: 0.1652 S33: 0.0434 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 457 THROUGH 476 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8991 38.5931 16.6914 REMARK 3 T TENSOR REMARK 3 T11: 0.2014 T22: 0.2311 REMARK 3 T33: 0.3576 T12: -0.0468 REMARK 3 T13: -0.0396 T23: -0.0583 REMARK 3 L TENSOR REMARK 3 L11: 3.6532 L22: 4.0574 REMARK 3 L33: 2.7857 L12: -0.4406 REMARK 3 L13: -0.2310 L23: -0.4624 REMARK 3 S TENSOR REMARK 3 S11: -0.0018 S12: -0.3532 S13: 0.2733 REMARK 3 S21: 0.2540 S22: -0.0249 S23: -0.7765 REMARK 3 S31: -0.3158 S32: 0.4482 S33: 0.0309 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 477 THROUGH 508 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5851 25.2434 18.0078 REMARK 3 T TENSOR REMARK 3 T11: 0.1832 T22: 0.2044 REMARK 3 T33: 0.1879 T12: 0.0241 REMARK 3 T13: -0.0371 T23: 0.0244 REMARK 3 L TENSOR REMARK 3 L11: 2.7047 L22: 3.9895 REMARK 3 L33: 3.0063 L12: 0.1605 REMARK 3 L13: -0.7212 L23: 0.0286 REMARK 3 S TENSOR REMARK 3 S11: -0.0623 S12: -0.3161 S13: -0.0271 REMARK 3 S21: 0.2352 S22: -0.0938 S23: -0.3968 REMARK 3 S31: 0.0071 S32: 0.3238 S33: 0.0906 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 509 THROUGH 533 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5244 19.9625 16.2906 REMARK 3 T TENSOR REMARK 3 T11: 0.2089 T22: 0.1669 REMARK 3 T33: 0.1760 T12: -0.0014 REMARK 3 T13: 0.0278 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.5737 L22: 5.3503 REMARK 3 L33: 2.6293 L12: 0.2917 REMARK 3 L13: -0.2668 L23: -0.3507 REMARK 3 S TENSOR REMARK 3 S11: -0.0259 S12: -0.1598 S13: -0.1057 REMARK 3 S21: 0.4459 S22: -0.0279 S23: 0.3199 REMARK 3 S31: 0.0605 S32: -0.1564 S33: 0.1164 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 254 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.8417 70.4407 43.4494 REMARK 3 T TENSOR REMARK 3 T11: 0.6351 T22: 0.3327 REMARK 3 T33: 0.2494 T12: -0.0239 REMARK 3 T13: -0.0661 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.8480 L22: 1.8789 REMARK 3 L33: 5.4576 L12: 1.2230 REMARK 3 L13: -2.7943 L23: -0.6844 REMARK 3 S TENSOR REMARK 3 S11: 0.2342 S12: -0.2450 S13: 0.3511 REMARK 3 S21: 0.8579 S22: 0.1273 S23: -0.0152 REMARK 3 S31: -0.8525 S32: 0.1134 S33: -0.3187 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 290 THROUGH 402 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3432 63.4989 30.1252 REMARK 3 T TENSOR REMARK 3 T11: 0.1492 T22: 0.1609 REMARK 3 T33: 0.1565 T12: 0.0165 REMARK 3 T13: -0.0122 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.1392 L22: 2.3286 REMARK 3 L33: 2.6657 L12: 0.0637 REMARK 3 L13: -0.1642 L23: -0.3260 REMARK 3 S TENSOR REMARK 3 S11: -0.0114 S12: -0.1695 S13: 0.0933 REMARK 3 S21: 0.3610 S22: 0.0542 S23: -0.0468 REMARK 3 S31: -0.2006 S32: -0.0068 S33: -0.0612 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 403 THROUGH 440 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3993 66.0221 21.0542 REMARK 3 T TENSOR REMARK 3 T11: 0.1504 T22: 0.2149 REMARK 3 T33: 0.2686 T12: 0.0126 REMARK 3 T13: 0.0003 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 2.2944 L22: 0.2003 REMARK 3 L33: 1.2704 L12: -0.4666 REMARK 3 L13: 0.9230 L23: -0.4614 REMARK 3 S TENSOR REMARK 3 S11: -0.1881 S12: -0.0075 S13: 0.1697 REMARK 3 S21: 0.0849 S22: 0.0578 S23: 0.2115 REMARK 3 S31: -0.1740 S32: -0.1951 S33: 0.1207 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 441 THROUGH 533 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1172 59.3374 9.8120 REMARK 3 T TENSOR REMARK 3 T11: 0.1470 T22: 0.1669 REMARK 3 T33: 0.1435 T12: -0.0172 REMARK 3 T13: -0.0195 T23: -0.0267 REMARK 3 L TENSOR REMARK 3 L11: 1.4778 L22: 3.1069 REMARK 3 L33: 1.2333 L12: -0.8020 REMARK 3 L13: -0.1909 L23: -0.5867 REMARK 3 S TENSOR REMARK 3 S11: 0.0361 S12: 0.1715 S13: -0.0042 REMARK 3 S21: -0.2551 S22: -0.0339 S23: 0.1033 REMARK 3 S31: -0.0032 S32: -0.0564 S33: -0.0159 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 257 THROUGH 263 OR REMARK 3 (RESID 264 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 265 REMARK 3 THROUGH 297 OR (RESID 298 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 299 THROUGH 300 OR (RESID 301 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 302 THROUGH 533 REMARK 3 OR RESID 602)) REMARK 3 SELECTION : (CHAIN B AND (RESID 257 THROUGH 276 OR REMARK 3 (RESID 277 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 278 REMARK 3 THROUGH 407 OR RESID 424 THROUGH 468 OR REMARK 3 (RESID 469 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 470 REMARK 3 THROUGH 533 OR RESID 601)) REMARK 3 ATOM PAIRS NUMBER : 1602 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7WF5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1300026596. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68050 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.798 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 23.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.85800 REMARK 200 R SYM FOR SHELL (I) : 0.69200 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2OIQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES (PH 6.4), 50MM SODIUM REMARK 280 ACETATE, 10MM MGCL2, 2% GLYCEROL, 8% PEG 4000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 248 REMARK 465 HIS A 249 REMARK 465 MET A 250 REMARK 465 GLN A 251 REMARK 465 THR A 252 REMARK 465 GLN A 253 REMARK 465 GLY A 254 REMARK 465 LEU A 255 REMARK 465 ALA A 256 REMARK 465 ALA A 408 REMARK 465 ARG A 409 REMARK 465 LEU A 410 REMARK 465 ILE A 411 REMARK 465 GLU A 412 REMARK 465 ASP A 413 REMARK 465 ASN A 414 REMARK 465 GLU A 415 REMARK 465 TYR A 416 REMARK 465 THR A 417 REMARK 465 ALA A 418 REMARK 465 ARG A 419 REMARK 465 GLN A 420 REMARK 465 GLY A 421 REMARK 465 ALA A 422 REMARK 465 LYS A 423 REMARK 465 GLY B 248 REMARK 465 HIS B 249 REMARK 465 MET B 250 REMARK 465 GLN B 251 REMARK 465 THR B 252 REMARK 465 GLN B 253 REMARK 465 ARG B 409 REMARK 465 LEU B 410 REMARK 465 ILE B 411 REMARK 465 GLU B 412 REMARK 465 ASP B 413 REMARK 465 ASN B 414 REMARK 465 GLU B 415 REMARK 465 TYR B 416 REMARK 465 THR B 417 REMARK 465 ALA B 418 REMARK 465 ARG B 419 REMARK 465 GLN B 420 REMARK 465 GLY B 421 REMARK 465 ALA B 422 REMARK 465 LYS B 423 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 257 CG CD CE NZ REMARK 470 ARG A 268 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 424 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 469 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 264 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 268 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 298 CG CD CE NZ REMARK 470 THR B 301 OG1 CG2 REMARK 470 PHE B 424 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 385 -15.97 92.68 REMARK 500 ASP A 386 49.11 -151.02 REMARK 500 ARG B 385 -19.23 93.94 REMARK 500 ASP B 386 48.74 -146.94 REMARK 500 REMARK 500 REMARK: NULL DBREF 7WF5 A 251 533 UNP P00523 SRC_CHICK 251 533 DBREF 7WF5 B 251 533 UNP P00523 SRC_CHICK 251 533 SEQADV 7WF5 GLY A 248 UNP P00523 EXPRESSION TAG SEQADV 7WF5 HIS A 249 UNP P00523 EXPRESSION TAG SEQADV 7WF5 MET A 250 UNP P00523 EXPRESSION TAG SEQADV 7WF5 GLY B 248 UNP P00523 EXPRESSION TAG SEQADV 7WF5 HIS B 249 UNP P00523 EXPRESSION TAG SEQADV 7WF5 MET B 250 UNP P00523 EXPRESSION TAG SEQRES 1 A 286 GLY HIS MET GLN THR GLN GLY LEU ALA LYS ASP ALA TRP SEQRES 2 A 286 GLU ILE PRO ARG GLU SER LEU ARG LEU GLU VAL LYS LEU SEQRES 3 A 286 GLY GLN GLY CYS PHE GLY GLU VAL TRP MET GLY THR TRP SEQRES 4 A 286 ASN GLY THR THR ARG VAL ALA ILE LYS THR LEU LYS PRO SEQRES 5 A 286 GLY THR MET SER PRO GLU ALA PHE LEU GLN GLU ALA GLN SEQRES 6 A 286 VAL MET LYS LYS LEU ARG HIS GLU LYS LEU VAL GLN LEU SEQRES 7 A 286 TYR ALA VAL VAL SER GLU GLU PRO ILE TYR ILE VAL THR SEQRES 8 A 286 GLU TYR MET SER LYS GLY SER LEU LEU ASP PHE LEU LYS SEQRES 9 A 286 GLY GLU MET GLY LYS TYR LEU ARG LEU PRO GLN LEU VAL SEQRES 10 A 286 ASP MET ALA ALA GLN ILE ALA SER GLY MET ALA TYR VAL SEQRES 11 A 286 GLU ARG MET ASN TYR VAL HIS ARG ASP LEU ARG ALA ALA SEQRES 12 A 286 ASN ILE LEU VAL GLY GLU ASN LEU VAL CYS LYS VAL ALA SEQRES 13 A 286 ASP PHE GLY LEU ALA ARG LEU ILE GLU ASP ASN GLU TYR SEQRES 14 A 286 THR ALA ARG GLN GLY ALA LYS PHE PRO ILE LYS TRP THR SEQRES 15 A 286 ALA PRO GLU ALA ALA LEU TYR GLY ARG PHE THR ILE LYS SEQRES 16 A 286 SER ASP VAL TRP SER PHE GLY ILE LEU LEU THR GLU LEU SEQRES 17 A 286 THR THR LYS GLY ARG VAL PRO TYR PRO GLY MET VAL ASN SEQRES 18 A 286 ARG GLU VAL LEU ASP GLN VAL GLU ARG GLY TYR ARG MET SEQRES 19 A 286 PRO CYS PRO PRO GLU CYS PRO GLU SER LEU HIS ASP LEU SEQRES 20 A 286 MET CYS GLN CYS TRP ARG LYS ASP PRO GLU GLU ARG PRO SEQRES 21 A 286 THR PHE GLU TYR LEU GLN ALA PHE LEU GLU ASP TYR PHE SEQRES 22 A 286 THR SER THR GLU PRO GLN TYR GLN PRO GLY GLU ASN LEU SEQRES 1 B 286 GLY HIS MET GLN THR GLN GLY LEU ALA LYS ASP ALA TRP SEQRES 2 B 286 GLU ILE PRO ARG GLU SER LEU ARG LEU GLU VAL LYS LEU SEQRES 3 B 286 GLY GLN GLY CYS PHE GLY GLU VAL TRP MET GLY THR TRP SEQRES 4 B 286 ASN GLY THR THR ARG VAL ALA ILE LYS THR LEU LYS PRO SEQRES 5 B 286 GLY THR MET SER PRO GLU ALA PHE LEU GLN GLU ALA GLN SEQRES 6 B 286 VAL MET LYS LYS LEU ARG HIS GLU LYS LEU VAL GLN LEU SEQRES 7 B 286 TYR ALA VAL VAL SER GLU GLU PRO ILE TYR ILE VAL THR SEQRES 8 B 286 GLU TYR MET SER LYS GLY SER LEU LEU ASP PHE LEU LYS SEQRES 9 B 286 GLY GLU MET GLY LYS TYR LEU ARG LEU PRO GLN LEU VAL SEQRES 10 B 286 ASP MET ALA ALA GLN ILE ALA SER GLY MET ALA TYR VAL SEQRES 11 B 286 GLU ARG MET ASN TYR VAL HIS ARG ASP LEU ARG ALA ALA SEQRES 12 B 286 ASN ILE LEU VAL GLY GLU ASN LEU VAL CYS LYS VAL ALA SEQRES 13 B 286 ASP PHE GLY LEU ALA ARG LEU ILE GLU ASP ASN GLU TYR SEQRES 14 B 286 THR ALA ARG GLN GLY ALA LYS PHE PRO ILE LYS TRP THR SEQRES 15 B 286 ALA PRO GLU ALA ALA LEU TYR GLY ARG PHE THR ILE LYS SEQRES 16 B 286 SER ASP VAL TRP SER PHE GLY ILE LEU LEU THR GLU LEU SEQRES 17 B 286 THR THR LYS GLY ARG VAL PRO TYR PRO GLY MET VAL ASN SEQRES 18 B 286 ARG GLU VAL LEU ASP GLN VAL GLU ARG GLY TYR ARG MET SEQRES 19 B 286 PRO CYS PRO PRO GLU CYS PRO GLU SER LEU HIS ASP LEU SEQRES 20 B 286 MET CYS GLN CYS TRP ARG LYS ASP PRO GLU GLU ARG PRO SEQRES 21 B 286 THR PHE GLU TYR LEU GLN ALA PHE LEU GLU ASP TYR PHE SEQRES 22 B 286 THR SER THR GLU PRO GLN TYR GLN PRO GLY GLU ASN LEU HET 0LI A 601 39 HET 0LI B 601 39 HETNAM 0LI 3-(IMIDAZO[1,2-B]PYRIDAZIN-3-YLETHYNYL)-4-METHYL-N-{4- HETNAM 2 0LI [(4-METHYLPIPERAZIN-1-YL)METHYL]-3-(TRIFLUOROMETHYL) HETNAM 3 0LI PHENYL}BENZAM IDE HETSYN 0LI PONATINIB FORMUL 3 0LI 2(C29 H27 F3 N6 O) FORMUL 5 HOH *488(H2 O) HELIX 1 AA1 PRO A 263 GLU A 265 5 3 HELIX 2 AA2 SER A 303 LEU A 317 1 15 HELIX 3 AA3 LEU A 346 GLY A 352 1 7 HELIX 4 AA4 GLU A 353 TYR A 357 5 5 HELIX 5 AA5 ARG A 359 MET A 380 1 22 HELIX 6 AA6 ARG A 388 ALA A 390 5 3 HELIX 7 AA7 GLU A 396 LEU A 398 5 3 HELIX 8 AA8 PRO A 425 THR A 429 5 5 HELIX 9 AA9 ALA A 430 GLY A 437 1 8 HELIX 10 AB1 THR A 440 THR A 457 1 18 HELIX 11 AB2 VAL A 467 ARG A 477 1 11 HELIX 12 AB3 PRO A 488 TRP A 499 1 12 HELIX 13 AB4 ASP A 502 ARG A 506 5 5 HELIX 14 AB5 THR A 508 ASP A 518 1 11 HELIX 15 AB6 ASP A 518 THR A 523 1 6 HELIX 16 AB7 PRO B 263 GLU B 265 5 3 HELIX 17 AB8 SER B 303 LYS B 316 1 14 HELIX 18 AB9 LEU B 346 GLY B 352 1 7 HELIX 19 AC1 MET B 354 LEU B 358 5 5 HELIX 20 AC2 ARG B 359 MET B 380 1 22 HELIX 21 AC3 ARG B 388 ALA B 390 5 3 HELIX 22 AC4 GLU B 396 LEU B 398 5 3 HELIX 23 AC5 PRO B 425 THR B 429 5 5 HELIX 24 AC6 ALA B 430 GLY B 437 1 8 HELIX 25 AC7 THR B 440 THR B 457 1 18 HELIX 26 AC8 VAL B 467 ARG B 477 1 11 HELIX 27 AC9 PRO B 488 TRP B 499 1 12 HELIX 28 AD1 ASP B 502 ARG B 506 5 5 HELIX 29 AD2 THR B 508 ASP B 518 1 11 HELIX 30 AD3 ASP B 518 THR B 523 1 6 SHEET 1 AA1 5 LEU A 267 GLN A 275 0 SHEET 2 AA1 5 GLU A 280 TRP A 286 -1 O MET A 283 N VAL A 271 SHEET 3 AA1 5 THR A 290 THR A 296 -1 O THR A 290 N TRP A 286 SHEET 4 AA1 5 TYR A 335 GLU A 339 -1 O ILE A 336 N LYS A 295 SHEET 5 AA1 5 LEU A 325 VAL A 329 -1 N TYR A 326 O VAL A 337 SHEET 1 AA2 3 GLY A 344 SER A 345 0 SHEET 2 AA2 3 ILE A 392 VAL A 394 -1 O VAL A 394 N GLY A 344 SHEET 3 AA2 3 CYS A 400 VAL A 402 -1 O LYS A 401 N LEU A 393 SHEET 1 AA3 5 LEU B 267 GLN B 275 0 SHEET 2 AA3 5 GLU B 280 TRP B 286 -1 O VAL B 281 N LEU B 273 SHEET 3 AA3 5 THR B 290 THR B 296 -1 O THR B 290 N TRP B 286 SHEET 4 AA3 5 TYR B 335 THR B 338 -1 O ILE B 336 N LYS B 295 SHEET 5 AA3 5 LEU B 325 VAL B 329 -1 N TYR B 326 O VAL B 337 SHEET 1 AA4 3 GLY B 344 SER B 345 0 SHEET 2 AA4 3 ILE B 392 VAL B 394 -1 O VAL B 394 N GLY B 344 SHEET 3 AA4 3 CYS B 400 VAL B 402 -1 O LYS B 401 N LEU B 393 CISPEP 1 GLU A 332 PRO A 333 0 -16.04 CISPEP 2 GLU B 332 PRO B 333 0 -0.55 CRYST1 41.927 63.632 74.505 79.14 89.50 88.80 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023851 -0.000499 -0.000115 0.00000 SCALE2 0.000000 0.015719 -0.003013 0.00000 SCALE3 0.000000 0.000000 0.013667 0.00000