data_7WGN # _entry.id 7WGN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7WGN pdb_00007wgn 10.2210/pdb7wgn/pdb WWPDB D_1300025761 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7WGN _pdbx_database_status.recvd_initial_deposition_date 2021-12-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kamata, S.' 1 0000-0002-2400-6533 'Honda, A.' 2 ? 'Akahane, M.' 3 ? 'Machida, Y.' 4 ? 'Uchii, K.' 5 ? 'Shiiyama, Y.' 6 ? 'Masuda, R.' 7 ? 'Oyama, T.' 8 0000-0002-3411-7608 'Ishii, I.' 9 0000-0002-5367-205X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CH _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Int J Mol Sci' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1422-0067 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 23 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Functional and Structural Insights into Human PPAR alpha / delta / gamma Subtype Selectivity of Bezafibrate, Fenofibric Acid, and Pemafibrate. ; _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.3390/ijms23094726 _citation.pdbx_database_id_PubMed 35563117 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Honda, A.' 1 ? primary 'Kamata, S.' 2 0000-0002-2400-6533 primary 'Akahane, M.' 3 ? primary 'Machida, Y.' 4 ? primary 'Uchii, K.' 5 ? primary 'Shiiyama, Y.' 6 ? primary 'Habu, Y.' 7 ? primary 'Miyawaki, S.' 8 ? primary 'Kaneko, C.' 9 ? primary 'Oyama, T.' 10 0000-0002-3411-7608 primary 'Ishii, I.' 11 0000-0002-5367-205X # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7WGN _cell.details ? _cell.formula_units_Z ? _cell.length_a 37.772 _cell.length_a_esd ? _cell.length_b 92.662 _cell.length_b_esd ? _cell.length_c 96.760 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WGN _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peroxisome proliferator-activated receptor delta' 31527.648 1 ? ? ? ? 2 non-polymer syn '(2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid' 490.548 1 ? ? ? ? 3 non-polymer syn 'octyl beta-D-glucopyranoside' 292.369 1 ? ? ? ? 4 water nat water 18.015 58 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;PPAR-delta,NUCI,Nuclear hormone receptor 1,NUC1,Nuclear receptor subfamily 1 group C member 2,Peroxisome proliferator-activated receptor beta,PPAR-beta ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMPQVADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHV FYRCQCTTVETVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFS DIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQYLFPKLLQKMAD LRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKDMY ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMPQVADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHV FYRCQCTTVETVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFS DIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQYLFPKLLQKMAD LRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKDMY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 PRO n 1 6 GLN n 1 7 VAL n 1 8 ALA n 1 9 ASP n 1 10 LEU n 1 11 LYS n 1 12 ALA n 1 13 PHE n 1 14 SER n 1 15 LYS n 1 16 HIS n 1 17 ILE n 1 18 TYR n 1 19 ASN n 1 20 ALA n 1 21 TYR n 1 22 LEU n 1 23 LYS n 1 24 ASN n 1 25 PHE n 1 26 ASN n 1 27 MET n 1 28 THR n 1 29 LYS n 1 30 LYS n 1 31 LYS n 1 32 ALA n 1 33 ARG n 1 34 SER n 1 35 ILE n 1 36 LEU n 1 37 THR n 1 38 GLY n 1 39 LYS n 1 40 ALA n 1 41 SER n 1 42 HIS n 1 43 THR n 1 44 ALA n 1 45 PRO n 1 46 PHE n 1 47 VAL n 1 48 ILE n 1 49 HIS n 1 50 ASP n 1 51 ILE n 1 52 GLU n 1 53 THR n 1 54 LEU n 1 55 TRP n 1 56 GLN n 1 57 ALA n 1 58 GLU n 1 59 LYS n 1 60 GLY n 1 61 LEU n 1 62 VAL n 1 63 TRP n 1 64 LYS n 1 65 GLN n 1 66 LEU n 1 67 VAL n 1 68 ASN n 1 69 GLY n 1 70 LEU n 1 71 PRO n 1 72 PRO n 1 73 TYR n 1 74 LYS n 1 75 GLU n 1 76 ILE n 1 77 SER n 1 78 VAL n 1 79 HIS n 1 80 VAL n 1 81 PHE n 1 82 TYR n 1 83 ARG n 1 84 CYS n 1 85 GLN n 1 86 CYS n 1 87 THR n 1 88 THR n 1 89 VAL n 1 90 GLU n 1 91 THR n 1 92 VAL n 1 93 ARG n 1 94 GLU n 1 95 LEU n 1 96 THR n 1 97 GLU n 1 98 PHE n 1 99 ALA n 1 100 LYS n 1 101 SER n 1 102 ILE n 1 103 PRO n 1 104 SER n 1 105 PHE n 1 106 SER n 1 107 SER n 1 108 LEU n 1 109 PHE n 1 110 LEU n 1 111 ASN n 1 112 ASP n 1 113 GLN n 1 114 VAL n 1 115 THR n 1 116 LEU n 1 117 LEU n 1 118 LYS n 1 119 TYR n 1 120 GLY n 1 121 VAL n 1 122 HIS n 1 123 GLU n 1 124 ALA n 1 125 ILE n 1 126 PHE n 1 127 ALA n 1 128 MET n 1 129 LEU n 1 130 ALA n 1 131 SER n 1 132 ILE n 1 133 VAL n 1 134 ASN n 1 135 LYS n 1 136 ASP n 1 137 GLY n 1 138 LEU n 1 139 LEU n 1 140 VAL n 1 141 ALA n 1 142 ASN n 1 143 GLY n 1 144 SER n 1 145 GLY n 1 146 PHE n 1 147 VAL n 1 148 THR n 1 149 ARG n 1 150 GLU n 1 151 PHE n 1 152 LEU n 1 153 ARG n 1 154 SER n 1 155 LEU n 1 156 ARG n 1 157 LYS n 1 158 PRO n 1 159 PHE n 1 160 SER n 1 161 ASP n 1 162 ILE n 1 163 ILE n 1 164 GLU n 1 165 PRO n 1 166 LYS n 1 167 PHE n 1 168 GLU n 1 169 PHE n 1 170 ALA n 1 171 VAL n 1 172 LYS n 1 173 PHE n 1 174 ASN n 1 175 ALA n 1 176 LEU n 1 177 GLU n 1 178 LEU n 1 179 ASP n 1 180 ASP n 1 181 SER n 1 182 ASP n 1 183 LEU n 1 184 ALA n 1 185 LEU n 1 186 PHE n 1 187 ILE n 1 188 ALA n 1 189 ALA n 1 190 ILE n 1 191 ILE n 1 192 LEU n 1 193 CYS n 1 194 GLY n 1 195 ASP n 1 196 ARG n 1 197 PRO n 1 198 GLY n 1 199 LEU n 1 200 MET n 1 201 ASN n 1 202 VAL n 1 203 PRO n 1 204 ARG n 1 205 VAL n 1 206 GLU n 1 207 ALA n 1 208 ILE n 1 209 GLN n 1 210 ASP n 1 211 THR n 1 212 ILE n 1 213 LEU n 1 214 ARG n 1 215 ALA n 1 216 LEU n 1 217 GLU n 1 218 PHE n 1 219 HIS n 1 220 LEU n 1 221 GLN n 1 222 ALA n 1 223 ASN n 1 224 HIS n 1 225 PRO n 1 226 ASP n 1 227 ALA n 1 228 GLN n 1 229 TYR n 1 230 LEU n 1 231 PHE n 1 232 PRO n 1 233 LYS n 1 234 LEU n 1 235 LEU n 1 236 GLN n 1 237 LYS n 1 238 MET n 1 239 ALA n 1 240 ASP n 1 241 LEU n 1 242 ARG n 1 243 GLN n 1 244 LEU n 1 245 VAL n 1 246 THR n 1 247 GLU n 1 248 HIS n 1 249 ALA n 1 250 GLN n 1 251 MET n 1 252 MET n 1 253 GLN n 1 254 ARG n 1 255 ILE n 1 256 LYS n 1 257 LYS n 1 258 THR n 1 259 GLU n 1 260 THR n 1 261 GLU n 1 262 THR n 1 263 SER n 1 264 LEU n 1 265 HIS n 1 266 PRO n 1 267 LEU n 1 268 LEU n 1 269 GLN n 1 270 GLU n 1 271 ILE n 1 272 TYR n 1 273 LYS n 1 274 ASP n 1 275 MET n 1 276 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 276 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PPARD, NR1C2, PPARB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PPARD_HUMAN _struct_ref.pdbx_db_accession Q03181 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PQVADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRC QCTTVETVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFSDIIE PKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQYLFPKLLQKMADLRQL VTEHAQMMQRIKKTETETSLHPLLQEIYKDMY ; _struct_ref.pdbx_align_begin 170 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7WGN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 276 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q03181 _struct_ref_seq.db_align_beg 170 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 441 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 170 _struct_ref_seq.pdbx_auth_seq_align_end 441 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7WGN GLY A 1 ? UNP Q03181 ? ? 'expression tag' 166 1 1 7WGN SER A 2 ? UNP Q03181 ? ? 'expression tag' 167 2 1 7WGN HIS A 3 ? UNP Q03181 ? ? 'expression tag' 168 3 1 7WGN MET A 4 ? UNP Q03181 ? ? 'expression tag' 169 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BOG D-saccharide n 'octyl beta-D-glucopyranoside' 'Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside' 'C14 H28 O6' 292.369 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 P7F non-polymer . '(2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid' ? 'C28 H30 N2 O6' 490.548 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7WGN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 54.20 _exptl_crystal.description 'THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS COLUMNS.' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05 M Bis-tis propane (pH 8.5), 14% PEG8000, 0.2 M KCl, 6% propanediol, 0.001 M EDTA, 0.001 M CaCl2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details Mirrors _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-03-20 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-5A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate 28.150 _reflns.entry_id 7WGN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.810 _reflns.d_resolution_low 48.380 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 31614 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.600 _reflns.pdbx_Rmerge_I_obs 0.032 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.000 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.035 _reflns.pdbx_Rpim_I_all 0.014 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 207167 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.810 1.850 ? 4.4 ? ? ? ? 1792 97.400 ? ? ? ? 0.389 ? ? ? ? ? ? ? ? 6.600 ? ? ? ? 0.423 0.163 ? 1 1 0.973 ? ? ? ? ? ? ? ? ? ? 9.060 48.380 ? 88.7 ? ? ? ? 314 99.300 ? ? ? ? 0.017 ? ? ? ? ? ? ? ? 5.800 ? ? ? ? 0.019 0.007 ? 2 1 1.000 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 77.750 _refine.B_iso_mean 34.6528 _refine.B_iso_min 16.010 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7WGN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8130 _refine.ls_d_res_low 37.7720 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 31538 _refine.ls_number_reflns_R_free 2917 _refine.ls_number_reflns_R_work 56322 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.5200 _refine.ls_percent_reflns_R_free 4.9200 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2275 _refine.ls_R_factor_R_free 0.2548 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2261 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.930 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3GZ9 _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.9100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2200 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.8130 _refine_hist.d_res_low 37.7720 _refine_hist.number_atoms_solvent 58 _refine_hist.number_atoms_total 2272 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 261 _refine_hist.pdbx_B_iso_mean_ligand 40.27 _refine_hist.pdbx_B_iso_mean_solvent 33.48 _refine_hist.pdbx_number_atoms_protein 2101 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 113 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 2232 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.589 ? 3015 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.035 ? 341 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 376 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.020 ? 1333 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.8130 1.8427 . . 137 2558 96.0000 . . . 0.2862 0.0000 0.2791 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8427 1.8744 . . 142 2698 100.0000 . . . 0.3051 0.0000 0.2669 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8744 1.9085 . . 148 2679 100.0000 . . . 0.2870 0.0000 0.2725 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9085 1.9452 . . 131 2689 99.0000 . . . 0.3282 0.0000 0.2896 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9452 1.9849 . . 120 2739 100.0000 . . . 0.3444 0.0000 0.2742 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9849 2.0281 . . 141 2645 100.0000 . . . 0.2831 0.0000 0.2801 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0281 2.0753 . . 122 2730 100.0000 . . . 0.3551 0.0000 0.2673 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0753 2.1272 . . 153 2671 100.0000 . . . 0.2853 0.0000 0.2592 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1272 2.1847 . . 163 2637 100.0000 . . . 0.2712 0.0000 0.2661 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1847 2.2489 . . 131 2711 100.0000 . . . 0.3260 0.0000 0.2578 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2489 2.3215 . . 118 2707 100.0000 . . . 0.3566 0.0000 0.2563 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3215 2.4045 . . 153 2650 99.0000 . . . 0.2103 0.0000 0.2503 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4045 2.5007 . . 118 2751 100.0000 . . . 0.2590 0.0000 0.2367 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5007 2.6145 . . 163 2631 100.0000 . . . 0.2719 0.0000 0.2535 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6145 2.7523 . . 125 2703 100.0000 . . . 0.2697 0.0000 0.2572 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7523 2.9247 . . 176 2676 100.0000 . . . 0.2764 0.0000 0.2395 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9247 3.1504 . . 161 2678 100.0000 . . . 0.2770 0.0000 0.2324 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1504 3.4673 . . 142 2684 100.0000 . . . 0.2752 0.0000 0.2278 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4673 3.9685 . . 130 2670 100.0000 . . . 0.2243 0.0000 0.2021 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9685 4.9981 . . 123 2705 100.0000 . . . 0.2033 0.0000 0.1786 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.9981 37.772 . . 120 2710 100.0000 . . . 0.1834 0.0000 0.1866 . . . . . . . . . . . # _struct.entry_id 7WGN _struct.title 'X-ray structure of human PPAR delta ligand binding domain-pemafibrate co-crystals obtained by co-crystallization' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7WGN _struct_keywords.text 'Nuclear receptor, Protein-ligand complex, PPAR, Transcription' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 8 ? PHE A 25 ? ALA A 173 PHE A 190 1 ? 18 HELX_P HELX_P2 AA2 THR A 28 ? GLY A 38 ? THR A 193 GLY A 203 1 ? 11 HELX_P HELX_P3 AA3 ASP A 50 ? LYS A 59 ? ASP A 215 LYS A 224 1 ? 10 HELX_P HELX_P4 AA4 GLU A 75 ? SER A 101 ? GLU A 240 SER A 266 1 ? 27 HELX_P HELX_P5 AA5 PHE A 109 ? ALA A 130 ? PHE A 274 ALA A 295 1 ? 22 HELX_P HELX_P6 AA6 ARG A 149 ? LEU A 155 ? ARG A 314 LEU A 320 1 ? 7 HELX_P HELX_P7 AA7 PRO A 158 ? ILE A 162 ? PRO A 323 ILE A 327 5 ? 5 HELX_P HELX_P8 AA8 ILE A 163 ? ALA A 175 ? ILE A 328 ALA A 340 1 ? 13 HELX_P HELX_P9 AA9 ASP A 179 ? LEU A 192 ? ASP A 344 LEU A 357 1 ? 14 HELX_P HELX_P10 AB1 ASN A 201 ? HIS A 224 ? ASN A 366 HIS A 389 1 ? 24 HELX_P HELX_P11 AB2 TYR A 229 ? GLU A 259 ? TYR A 394 GLU A 424 1 ? 31 HELX_P HELX_P12 AB3 HIS A 265 ? LYS A 273 ? HIS A 430 LYS A 438 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 157 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 322 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 158 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 323 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.42 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 46 ? ILE A 48 ? PHE A 211 ILE A 213 AA1 2 GLY A 145 ? THR A 148 ? GLY A 310 THR A 313 AA1 3 GLY A 137 ? VAL A 140 ? GLY A 302 VAL A 305 AA1 4 VAL A 133 ? ASN A 134 ? VAL A 298 ASN A 299 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 48 ? N ILE A 213 O PHE A 146 ? O PHE A 311 AA1 2 3 O GLY A 145 ? O GLY A 310 N VAL A 140 ? N VAL A 305 AA1 3 4 O GLY A 137 ? O GLY A 302 N ASN A 134 ? N ASN A 299 # _atom_sites.entry_id 7WGN _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.026475 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010792 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010335 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 166 ? ? ? A . n A 1 2 SER 2 167 ? ? ? A . n A 1 3 HIS 3 168 ? ? ? A . n A 1 4 MET 4 169 ? ? ? A . n A 1 5 PRO 5 170 ? ? ? A . n A 1 6 GLN 6 171 ? ? ? A . n A 1 7 VAL 7 172 ? ? ? A . n A 1 8 ALA 8 173 173 ALA ALA A . n A 1 9 ASP 9 174 174 ASP ASP A . n A 1 10 LEU 10 175 175 LEU LEU A . n A 1 11 LYS 11 176 176 LYS LYS A . n A 1 12 ALA 12 177 177 ALA ALA A . n A 1 13 PHE 13 178 178 PHE PHE A . n A 1 14 SER 14 179 179 SER SER A . n A 1 15 LYS 15 180 180 LYS LYS A . n A 1 16 HIS 16 181 181 HIS HIS A . n A 1 17 ILE 17 182 182 ILE ILE A . n A 1 18 TYR 18 183 183 TYR TYR A . n A 1 19 ASN 19 184 184 ASN ASN A . n A 1 20 ALA 20 185 185 ALA ALA A . n A 1 21 TYR 21 186 186 TYR TYR A . n A 1 22 LEU 22 187 187 LEU LEU A . n A 1 23 LYS 23 188 188 LYS LYS A . n A 1 24 ASN 24 189 189 ASN ASN A . n A 1 25 PHE 25 190 190 PHE PHE A . n A 1 26 ASN 26 191 191 ASN ASN A . n A 1 27 MET 27 192 192 MET MET A . n A 1 28 THR 28 193 193 THR THR A . n A 1 29 LYS 29 194 194 LYS LYS A . n A 1 30 LYS 30 195 195 LYS LYS A . n A 1 31 LYS 31 196 196 LYS LYS A . n A 1 32 ALA 32 197 197 ALA ALA A . n A 1 33 ARG 33 198 198 ARG ARG A . n A 1 34 SER 34 199 199 SER SER A . n A 1 35 ILE 35 200 200 ILE ILE A . n A 1 36 LEU 36 201 201 LEU LEU A . n A 1 37 THR 37 202 202 THR THR A . n A 1 38 GLY 38 203 203 GLY GLY A . n A 1 39 LYS 39 204 204 LYS LYS A . n A 1 40 ALA 40 205 ? ? ? A . n A 1 41 SER 41 206 ? ? ? A . n A 1 42 HIS 42 207 ? ? ? A . n A 1 43 THR 43 208 208 THR THR A . n A 1 44 ALA 44 209 209 ALA ALA A . n A 1 45 PRO 45 210 210 PRO PRO A . n A 1 46 PHE 46 211 211 PHE PHE A . n A 1 47 VAL 47 212 212 VAL VAL A . n A 1 48 ILE 48 213 213 ILE ILE A . n A 1 49 HIS 49 214 214 HIS HIS A . n A 1 50 ASP 50 215 215 ASP ASP A . n A 1 51 ILE 51 216 216 ILE ILE A . n A 1 52 GLU 52 217 217 GLU GLU A . n A 1 53 THR 53 218 218 THR THR A . n A 1 54 LEU 54 219 219 LEU LEU A . n A 1 55 TRP 55 220 220 TRP TRP A . n A 1 56 GLN 56 221 221 GLN GLN A . n A 1 57 ALA 57 222 222 ALA ALA A . n A 1 58 GLU 58 223 223 GLU GLU A . n A 1 59 LYS 59 224 224 LYS LYS A . n A 1 60 GLY 60 225 225 GLY GLY A . n A 1 61 LEU 61 226 226 LEU LEU A . n A 1 62 VAL 62 227 227 VAL VAL A . n A 1 63 TRP 63 228 228 TRP TRP A . n A 1 64 LYS 64 229 ? ? ? A . n A 1 65 GLN 65 230 ? ? ? A . n A 1 66 LEU 66 231 ? ? ? A . n A 1 67 VAL 67 232 ? ? ? A . n A 1 68 ASN 68 233 ? ? ? A . n A 1 69 GLY 69 234 234 GLY GLY A . n A 1 70 LEU 70 235 235 LEU LEU A . n A 1 71 PRO 71 236 236 PRO PRO A . n A 1 72 PRO 72 237 237 PRO PRO A . n A 1 73 TYR 73 238 238 TYR TYR A . n A 1 74 LYS 74 239 239 LYS LYS A . n A 1 75 GLU 75 240 240 GLU GLU A . n A 1 76 ILE 76 241 241 ILE ILE A . n A 1 77 SER 77 242 242 SER SER A . n A 1 78 VAL 78 243 243 VAL VAL A . n A 1 79 HIS 79 244 244 HIS HIS A . n A 1 80 VAL 80 245 245 VAL VAL A . n A 1 81 PHE 81 246 246 PHE PHE A . n A 1 82 TYR 82 247 247 TYR TYR A . n A 1 83 ARG 83 248 248 ARG ARG A . n A 1 84 CYS 84 249 249 CYS CYS A . n A 1 85 GLN 85 250 250 GLN GLN A . n A 1 86 CYS 86 251 251 CYS CYS A . n A 1 87 THR 87 252 252 THR THR A . n A 1 88 THR 88 253 253 THR THR A . n A 1 89 VAL 89 254 254 VAL VAL A . n A 1 90 GLU 90 255 255 GLU GLU A . n A 1 91 THR 91 256 256 THR THR A . n A 1 92 VAL 92 257 257 VAL VAL A . n A 1 93 ARG 93 258 258 ARG ARG A . n A 1 94 GLU 94 259 259 GLU GLU A . n A 1 95 LEU 95 260 260 LEU LEU A . n A 1 96 THR 96 261 261 THR THR A . n A 1 97 GLU 97 262 262 GLU GLU A . n A 1 98 PHE 98 263 263 PHE PHE A . n A 1 99 ALA 99 264 264 ALA ALA A . n A 1 100 LYS 100 265 265 LYS LYS A . n A 1 101 SER 101 266 266 SER SER A . n A 1 102 ILE 102 267 267 ILE ILE A . n A 1 103 PRO 103 268 268 PRO PRO A . n A 1 104 SER 104 269 269 SER SER A . n A 1 105 PHE 105 270 270 PHE PHE A . n A 1 106 SER 106 271 271 SER SER A . n A 1 107 SER 107 272 272 SER SER A . n A 1 108 LEU 108 273 273 LEU LEU A . n A 1 109 PHE 109 274 274 PHE PHE A . n A 1 110 LEU 110 275 275 LEU LEU A . n A 1 111 ASN 111 276 276 ASN ASN A . n A 1 112 ASP 112 277 277 ASP ASP A . n A 1 113 GLN 113 278 278 GLN GLN A . n A 1 114 VAL 114 279 279 VAL VAL A . n A 1 115 THR 115 280 280 THR THR A . n A 1 116 LEU 116 281 281 LEU LEU A . n A 1 117 LEU 117 282 282 LEU LEU A . n A 1 118 LYS 118 283 283 LYS LYS A . n A 1 119 TYR 119 284 284 TYR TYR A . n A 1 120 GLY 120 285 285 GLY GLY A . n A 1 121 VAL 121 286 286 VAL VAL A . n A 1 122 HIS 122 287 287 HIS HIS A . n A 1 123 GLU 123 288 288 GLU GLU A . n A 1 124 ALA 124 289 289 ALA ALA A . n A 1 125 ILE 125 290 290 ILE ILE A . n A 1 126 PHE 126 291 291 PHE PHE A . n A 1 127 ALA 127 292 292 ALA ALA A . n A 1 128 MET 128 293 293 MET MET A . n A 1 129 LEU 129 294 294 LEU LEU A . n A 1 130 ALA 130 295 295 ALA ALA A . n A 1 131 SER 131 296 296 SER SER A . n A 1 132 ILE 132 297 297 ILE ILE A . n A 1 133 VAL 133 298 298 VAL VAL A . n A 1 134 ASN 134 299 299 ASN ASN A . n A 1 135 LYS 135 300 300 LYS LYS A . n A 1 136 ASP 136 301 301 ASP ASP A . n A 1 137 GLY 137 302 302 GLY GLY A . n A 1 138 LEU 138 303 303 LEU LEU A . n A 1 139 LEU 139 304 304 LEU LEU A . n A 1 140 VAL 140 305 305 VAL VAL A . n A 1 141 ALA 141 306 306 ALA ALA A . n A 1 142 ASN 142 307 307 ASN ASN A . n A 1 143 GLY 143 308 308 GLY GLY A . n A 1 144 SER 144 309 309 SER SER A . n A 1 145 GLY 145 310 310 GLY GLY A . n A 1 146 PHE 146 311 311 PHE PHE A . n A 1 147 VAL 147 312 312 VAL VAL A . n A 1 148 THR 148 313 313 THR THR A . n A 1 149 ARG 149 314 314 ARG ARG A . n A 1 150 GLU 150 315 315 GLU GLU A . n A 1 151 PHE 151 316 316 PHE PHE A . n A 1 152 LEU 152 317 317 LEU LEU A . n A 1 153 ARG 153 318 318 ARG ARG A . n A 1 154 SER 154 319 319 SER SER A . n A 1 155 LEU 155 320 320 LEU LEU A . n A 1 156 ARG 156 321 321 ARG ARG A . n A 1 157 LYS 157 322 322 LYS LYS A . n A 1 158 PRO 158 323 323 PRO PRO A . n A 1 159 PHE 159 324 324 PHE PHE A . n A 1 160 SER 160 325 325 SER SER A . n A 1 161 ASP 161 326 326 ASP ASP A . n A 1 162 ILE 162 327 327 ILE ILE A . n A 1 163 ILE 163 328 328 ILE ILE A . n A 1 164 GLU 164 329 329 GLU GLU A . n A 1 165 PRO 165 330 330 PRO PRO A . n A 1 166 LYS 166 331 331 LYS LYS A . n A 1 167 PHE 167 332 332 PHE PHE A . n A 1 168 GLU 168 333 333 GLU GLU A . n A 1 169 PHE 169 334 334 PHE PHE A . n A 1 170 ALA 170 335 335 ALA ALA A . n A 1 171 VAL 171 336 336 VAL VAL A . n A 1 172 LYS 172 337 337 LYS LYS A . n A 1 173 PHE 173 338 338 PHE PHE A . n A 1 174 ASN 174 339 339 ASN ASN A . n A 1 175 ALA 175 340 340 ALA ALA A . n A 1 176 LEU 176 341 341 LEU LEU A . n A 1 177 GLU 177 342 342 GLU GLU A . n A 1 178 LEU 178 343 343 LEU LEU A . n A 1 179 ASP 179 344 344 ASP ASP A . n A 1 180 ASP 180 345 345 ASP ASP A . n A 1 181 SER 181 346 346 SER SER A . n A 1 182 ASP 182 347 347 ASP ASP A . n A 1 183 LEU 183 348 348 LEU LEU A . n A 1 184 ALA 184 349 349 ALA ALA A . n A 1 185 LEU 185 350 350 LEU LEU A . n A 1 186 PHE 186 351 351 PHE PHE A . n A 1 187 ILE 187 352 352 ILE ILE A . n A 1 188 ALA 188 353 353 ALA ALA A . n A 1 189 ALA 189 354 354 ALA ALA A . n A 1 190 ILE 190 355 355 ILE ILE A . n A 1 191 ILE 191 356 356 ILE ILE A . n A 1 192 LEU 192 357 357 LEU LEU A . n A 1 193 CYS 193 358 358 CYS CYS A . n A 1 194 GLY 194 359 359 GLY GLY A . n A 1 195 ASP 195 360 360 ASP ASP A . n A 1 196 ARG 196 361 361 ARG ARG A . n A 1 197 PRO 197 362 362 PRO PRO A . n A 1 198 GLY 198 363 363 GLY GLY A . n A 1 199 LEU 199 364 364 LEU LEU A . n A 1 200 MET 200 365 365 MET MET A . n A 1 201 ASN 201 366 366 ASN ASN A . n A 1 202 VAL 202 367 367 VAL VAL A . n A 1 203 PRO 203 368 368 PRO PRO A . n A 1 204 ARG 204 369 369 ARG ARG A . n A 1 205 VAL 205 370 370 VAL VAL A . n A 1 206 GLU 206 371 371 GLU GLU A . n A 1 207 ALA 207 372 372 ALA ALA A . n A 1 208 ILE 208 373 373 ILE ILE A . n A 1 209 GLN 209 374 374 GLN GLN A . n A 1 210 ASP 210 375 375 ASP ASP A . n A 1 211 THR 211 376 376 THR THR A . n A 1 212 ILE 212 377 377 ILE ILE A . n A 1 213 LEU 213 378 378 LEU LEU A . n A 1 214 ARG 214 379 379 ARG ARG A . n A 1 215 ALA 215 380 380 ALA ALA A . n A 1 216 LEU 216 381 381 LEU LEU A . n A 1 217 GLU 217 382 382 GLU GLU A . n A 1 218 PHE 218 383 383 PHE PHE A . n A 1 219 HIS 219 384 384 HIS HIS A . n A 1 220 LEU 220 385 385 LEU LEU A . n A 1 221 GLN 221 386 386 GLN GLN A . n A 1 222 ALA 222 387 387 ALA ALA A . n A 1 223 ASN 223 388 388 ASN ASN A . n A 1 224 HIS 224 389 389 HIS HIS A . n A 1 225 PRO 225 390 390 PRO PRO A . n A 1 226 ASP 226 391 391 ASP ASP A . n A 1 227 ALA 227 392 392 ALA ALA A . n A 1 228 GLN 228 393 393 GLN GLN A . n A 1 229 TYR 229 394 394 TYR TYR A . n A 1 230 LEU 230 395 395 LEU LEU A . n A 1 231 PHE 231 396 396 PHE PHE A . n A 1 232 PRO 232 397 397 PRO PRO A . n A 1 233 LYS 233 398 398 LYS LYS A . n A 1 234 LEU 234 399 399 LEU LEU A . n A 1 235 LEU 235 400 400 LEU LEU A . n A 1 236 GLN 236 401 401 GLN GLN A . n A 1 237 LYS 237 402 402 LYS LYS A . n A 1 238 MET 238 403 403 MET MET A . n A 1 239 ALA 239 404 404 ALA ALA A . n A 1 240 ASP 240 405 405 ASP ASP A . n A 1 241 LEU 241 406 406 LEU LEU A . n A 1 242 ARG 242 407 407 ARG ARG A . n A 1 243 GLN 243 408 408 GLN GLN A . n A 1 244 LEU 244 409 409 LEU LEU A . n A 1 245 VAL 245 410 410 VAL VAL A . n A 1 246 THR 246 411 411 THR THR A . n A 1 247 GLU 247 412 412 GLU GLU A . n A 1 248 HIS 248 413 413 HIS HIS A . n A 1 249 ALA 249 414 414 ALA ALA A . n A 1 250 GLN 250 415 415 GLN GLN A . n A 1 251 MET 251 416 416 MET MET A . n A 1 252 MET 252 417 417 MET MET A . n A 1 253 GLN 253 418 418 GLN GLN A . n A 1 254 ARG 254 419 419 ARG ARG A . n A 1 255 ILE 255 420 420 ILE ILE A . n A 1 256 LYS 256 421 421 LYS LYS A . n A 1 257 LYS 257 422 422 LYS LYS A . n A 1 258 THR 258 423 423 THR THR A . n A 1 259 GLU 259 424 424 GLU GLU A . n A 1 260 THR 260 425 425 THR THR A . n A 1 261 GLU 261 426 426 GLU GLU A . n A 1 262 THR 262 427 427 THR THR A . n A 1 263 SER 263 428 428 SER SER A . n A 1 264 LEU 264 429 429 LEU LEU A . n A 1 265 HIS 265 430 430 HIS HIS A . n A 1 266 PRO 266 431 431 PRO PRO A . n A 1 267 LEU 267 432 432 LEU LEU A . n A 1 268 LEU 268 433 433 LEU LEU A . n A 1 269 GLN 269 434 434 GLN GLN A . n A 1 270 GLU 270 435 435 GLU GLU A . n A 1 271 ILE 271 436 436 ILE ILE A . n A 1 272 TYR 272 437 437 TYR TYR A . n A 1 273 LYS 273 438 438 LYS LYS A . n A 1 274 ASP 274 439 439 ASP ASP A . n A 1 275 MET 275 440 440 MET MET A . n A 1 276 TYR 276 441 441 TYR TYR A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email isao-ishii@umin.ac.jp _pdbx_contact_author.name_first Isao _pdbx_contact_author.name_last Ishii _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5367-205X # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P7F 1 501 1 P7F P7F A . C 3 BOG 1 502 1 BOG BOG A . D 4 HOH 1 601 56 HOH HOH A . D 4 HOH 2 602 34 HOH HOH A . D 4 HOH 3 603 69 HOH HOH A . D 4 HOH 4 604 36 HOH HOH A . D 4 HOH 5 605 54 HOH HOH A . D 4 HOH 6 606 61 HOH HOH A . D 4 HOH 7 607 2 HOH HOH A . D 4 HOH 8 608 48 HOH HOH A . D 4 HOH 9 609 33 HOH HOH A . D 4 HOH 10 610 62 HOH HOH A . D 4 HOH 11 611 3 HOH HOH A . D 4 HOH 12 612 31 HOH HOH A . D 4 HOH 13 613 44 HOH HOH A . D 4 HOH 14 614 19 HOH HOH A . D 4 HOH 15 615 55 HOH HOH A . D 4 HOH 16 616 52 HOH HOH A . D 4 HOH 17 617 53 HOH HOH A . D 4 HOH 18 618 66 HOH HOH A . D 4 HOH 19 619 64 HOH HOH A . D 4 HOH 20 620 21 HOH HOH A . D 4 HOH 21 621 43 HOH HOH A . D 4 HOH 22 622 41 HOH HOH A . D 4 HOH 23 623 8 HOH HOH A . D 4 HOH 24 624 57 HOH HOH A . D 4 HOH 25 625 12 HOH HOH A . D 4 HOH 26 626 63 HOH HOH A . D 4 HOH 27 627 22 HOH HOH A . D 4 HOH 28 628 35 HOH HOH A . D 4 HOH 29 629 14 HOH HOH A . D 4 HOH 30 630 4 HOH HOH A . D 4 HOH 31 631 58 HOH HOH A . D 4 HOH 32 632 32 HOH HOH A . D 4 HOH 33 633 11 HOH HOH A . D 4 HOH 34 634 9 HOH HOH A . D 4 HOH 35 635 38 HOH HOH A . D 4 HOH 36 636 28 HOH HOH A . D 4 HOH 37 637 65 HOH HOH A . D 4 HOH 38 638 67 HOH HOH A . D 4 HOH 39 639 15 HOH HOH A . D 4 HOH 40 640 25 HOH HOH A . D 4 HOH 41 641 20 HOH HOH A . D 4 HOH 42 642 68 HOH HOH A . D 4 HOH 43 643 60 HOH HOH A . D 4 HOH 44 644 39 HOH HOH A . D 4 HOH 45 645 45 HOH HOH A . D 4 HOH 46 646 49 HOH HOH A . D 4 HOH 47 647 47 HOH HOH A . D 4 HOH 48 648 30 HOH HOH A . D 4 HOH 49 649 24 HOH HOH A . D 4 HOH 50 650 59 HOH HOH A . D 4 HOH 51 651 6 HOH HOH A . D 4 HOH 52 652 42 HOH HOH A . D 4 HOH 53 653 16 HOH HOH A . D 4 HOH 54 654 23 HOH HOH A . D 4 HOH 55 655 5 HOH HOH A . D 4 HOH 56 656 27 HOH HOH A . D 4 HOH 57 657 50 HOH HOH A . D 4 HOH 58 658 18 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 440 ? 1 MORE 1 ? 1 'SSA (A^2)' 12650 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-05-25 2 'Structure model' 1 1 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # _pdbx_phasing_MR.entry_id 7WGN _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 4.020 _pdbx_phasing_MR.d_res_low_rotation 48.380 _pdbx_phasing_MR.d_res_high_translation 4.020 _pdbx_phasing_MR.d_res_low_translation 48.380 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.21 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.7.16 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11.1-2575-000 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 5 # _pdbx_entry_details.entry_id 7WGN _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 226 ? ? 66.26 116.49 2 1 VAL A 227 ? ? 72.88 -83.49 3 1 SER A 269 ? ? 84.42 -8.05 4 1 ASN A 366 ? ? -101.15 73.09 5 1 GLN A 393 ? ? -82.74 -71.99 6 1 TYR A 394 ? ? -92.58 30.68 7 1 ASP A 439 ? ? 30.57 54.25 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 224 ? CG ? A LYS 59 CG 2 1 Y 1 A LYS 224 ? CD ? A LYS 59 CD 3 1 Y 1 A LYS 224 ? CE ? A LYS 59 CE 4 1 Y 1 A LYS 224 ? NZ ? A LYS 59 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 166 ? A GLY 1 2 1 Y 1 A SER 167 ? A SER 2 3 1 Y 1 A HIS 168 ? A HIS 3 4 1 Y 1 A MET 169 ? A MET 4 5 1 Y 1 A PRO 170 ? A PRO 5 6 1 Y 1 A GLN 171 ? A GLN 6 7 1 Y 1 A VAL 172 ? A VAL 7 8 1 Y 1 A ALA 205 ? A ALA 40 9 1 Y 1 A SER 206 ? A SER 41 10 1 Y 1 A HIS 207 ? A HIS 42 11 1 Y 1 A LYS 229 ? A LYS 64 12 1 Y 1 A GLN 230 ? A GLN 65 13 1 Y 1 A LEU 231 ? A LEU 66 14 1 Y 1 A VAL 232 ? A VAL 67 15 1 Y 1 A ASN 233 ? A ASN 68 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BOG C1 C N R 74 BOG O1 O N N 75 BOG C2 C N R 76 BOG O2 O N N 77 BOG C3 C N S 78 BOG O3 O N N 79 BOG C4 C N S 80 BOG O4 O N N 81 BOG C5 C N R 82 BOG O5 O N N 83 BOG C6 C N N 84 BOG O6 O N N 85 BOG "C1'" C N N 86 BOG "C2'" C N N 87 BOG "C3'" C N N 88 BOG "C4'" C N N 89 BOG "C5'" C N N 90 BOG "C6'" C N N 91 BOG "C7'" C N N 92 BOG "C8'" C N N 93 BOG H1 H N N 94 BOG H2 H N N 95 BOG HO2 H N N 96 BOG H3 H N N 97 BOG HO3 H N N 98 BOG H4 H N N 99 BOG HO4 H N N 100 BOG H5 H N N 101 BOG H61 H N N 102 BOG H62 H N N 103 BOG HO6 H N N 104 BOG "H1'1" H N N 105 BOG "H1'2" H N N 106 BOG "H2'1" H N N 107 BOG "H2'2" H N N 108 BOG "H3'1" H N N 109 BOG "H3'2" H N N 110 BOG "H4'1" H N N 111 BOG "H4'2" H N N 112 BOG "H5'1" H N N 113 BOG "H5'2" H N N 114 BOG "H6'1" H N N 115 BOG "H6'2" H N N 116 BOG "H7'1" H N N 117 BOG "H7'2" H N N 118 BOG "H8'1" H N N 119 BOG "H8'2" H N N 120 BOG "H8'3" H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 P7F C09 C N N 298 P7F C10 C N N 299 P7F C11 C N N 300 P7F C12 C Y N 301 P7F C13 C Y N 302 P7F C14 C N N 303 P7F C15 C Y N 304 P7F C16 C Y N 305 P7F C17 C Y N 306 P7F C18 C Y N 307 P7F C19 C Y N 308 P7F C20 C N R 309 P7F C21 C Y N 310 P7F C22 C Y N 311 P7F C23 C N N 312 P7F C24 C Y N 313 P7F C25 C Y N 314 P7F C26 C Y N 315 P7F C27 C Y N 316 P7F C28 C Y N 317 P7F C29 C N N 318 P7F C30 C N N 319 P7F C31 C Y N 320 P7F C32 C Y N 321 P7F C33 C Y N 322 P7F C34 C Y N 323 P7F C35 C Y N 324 P7F C36 C N N 325 P7F N07 N N N 326 P7F N08 N Y N 327 P7F O01 O Y N 328 P7F O02 O N N 329 P7F O03 O N N 330 P7F O04 O N N 331 P7F O05 O N N 332 P7F O06 O N N 333 P7F H091 H N N 334 P7F H092 H N N 335 P7F H102 H N N 336 P7F H101 H N N 337 P7F H112 H N N 338 P7F H111 H N N 339 P7F H141 H N N 340 P7F H142 H N N 341 P7F H151 H N N 342 P7F H161 H N N 343 P7F H201 H N N 344 P7F H211 H N N 345 P7F H221 H N N 346 P7F H232 H N N 347 P7F H231 H N N 348 P7F H241 H N N 349 P7F H251 H N N 350 P7F H271 H N N 351 P7F H281 H N N 352 P7F H292 H N N 353 P7F H291 H N N 354 P7F H293 H N N 355 P7F H311 H N N 356 P7F H321 H N N 357 P7F H331 H N N 358 P7F H341 H N N 359 P7F H363 H N N 360 P7F H362 H N N 361 P7F H361 H N N 362 P7F H1 H N N 363 PHE N N N N 364 PHE CA C N S 365 PHE C C N N 366 PHE O O N N 367 PHE CB C N N 368 PHE CG C Y N 369 PHE CD1 C Y N 370 PHE CD2 C Y N 371 PHE CE1 C Y N 372 PHE CE2 C Y N 373 PHE CZ C Y N 374 PHE OXT O N N 375 PHE H H N N 376 PHE H2 H N N 377 PHE HA H N N 378 PHE HB2 H N N 379 PHE HB3 H N N 380 PHE HD1 H N N 381 PHE HD2 H N N 382 PHE HE1 H N N 383 PHE HE2 H N N 384 PHE HZ H N N 385 PHE HXT H N N 386 PRO N N N N 387 PRO CA C N S 388 PRO C C N N 389 PRO O O N N 390 PRO CB C N N 391 PRO CG C N N 392 PRO CD C N N 393 PRO OXT O N N 394 PRO H H N N 395 PRO HA H N N 396 PRO HB2 H N N 397 PRO HB3 H N N 398 PRO HG2 H N N 399 PRO HG3 H N N 400 PRO HD2 H N N 401 PRO HD3 H N N 402 PRO HXT H N N 403 SER N N N N 404 SER CA C N S 405 SER C C N N 406 SER O O N N 407 SER CB C N N 408 SER OG O N N 409 SER OXT O N N 410 SER H H N N 411 SER H2 H N N 412 SER HA H N N 413 SER HB2 H N N 414 SER HB3 H N N 415 SER HG H N N 416 SER HXT H N N 417 THR N N N N 418 THR CA C N S 419 THR C C N N 420 THR O O N N 421 THR CB C N R 422 THR OG1 O N N 423 THR CG2 C N N 424 THR OXT O N N 425 THR H H N N 426 THR H2 H N N 427 THR HA H N N 428 THR HB H N N 429 THR HG1 H N N 430 THR HG21 H N N 431 THR HG22 H N N 432 THR HG23 H N N 433 THR HXT H N N 434 TRP N N N N 435 TRP CA C N S 436 TRP C C N N 437 TRP O O N N 438 TRP CB C N N 439 TRP CG C Y N 440 TRP CD1 C Y N 441 TRP CD2 C Y N 442 TRP NE1 N Y N 443 TRP CE2 C Y N 444 TRP CE3 C Y N 445 TRP CZ2 C Y N 446 TRP CZ3 C Y N 447 TRP CH2 C Y N 448 TRP OXT O N N 449 TRP H H N N 450 TRP H2 H N N 451 TRP HA H N N 452 TRP HB2 H N N 453 TRP HB3 H N N 454 TRP HD1 H N N 455 TRP HE1 H N N 456 TRP HE3 H N N 457 TRP HZ2 H N N 458 TRP HZ3 H N N 459 TRP HH2 H N N 460 TRP HXT H N N 461 TYR N N N N 462 TYR CA C N S 463 TYR C C N N 464 TYR O O N N 465 TYR CB C N N 466 TYR CG C Y N 467 TYR CD1 C Y N 468 TYR CD2 C Y N 469 TYR CE1 C Y N 470 TYR CE2 C Y N 471 TYR CZ C Y N 472 TYR OH O N N 473 TYR OXT O N N 474 TYR H H N N 475 TYR H2 H N N 476 TYR HA H N N 477 TYR HB2 H N N 478 TYR HB3 H N N 479 TYR HD1 H N N 480 TYR HD2 H N N 481 TYR HE1 H N N 482 TYR HE2 H N N 483 TYR HH H N N 484 TYR HXT H N N 485 VAL N N N N 486 VAL CA C N S 487 VAL C C N N 488 VAL O O N N 489 VAL CB C N N 490 VAL CG1 C N N 491 VAL CG2 C N N 492 VAL OXT O N N 493 VAL H H N N 494 VAL H2 H N N 495 VAL HA H N N 496 VAL HB H N N 497 VAL HG11 H N N 498 VAL HG12 H N N 499 VAL HG13 H N N 500 VAL HG21 H N N 501 VAL HG22 H N N 502 VAL HG23 H N N 503 VAL HXT H N N 504 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BOG C1 O1 sing N N 70 BOG C1 C2 sing N N 71 BOG C1 O5 sing N N 72 BOG C1 H1 sing N N 73 BOG O1 "C1'" sing N N 74 BOG C2 O2 sing N N 75 BOG C2 C3 sing N N 76 BOG C2 H2 sing N N 77 BOG O2 HO2 sing N N 78 BOG C3 O3 sing N N 79 BOG C3 C4 sing N N 80 BOG C3 H3 sing N N 81 BOG O3 HO3 sing N N 82 BOG C4 O4 sing N N 83 BOG C4 C5 sing N N 84 BOG C4 H4 sing N N 85 BOG O4 HO4 sing N N 86 BOG C5 O5 sing N N 87 BOG C5 C6 sing N N 88 BOG C5 H5 sing N N 89 BOG C6 O6 sing N N 90 BOG C6 H61 sing N N 91 BOG C6 H62 sing N N 92 BOG O6 HO6 sing N N 93 BOG "C1'" "C2'" sing N N 94 BOG "C1'" "H1'1" sing N N 95 BOG "C1'" "H1'2" sing N N 96 BOG "C2'" "C3'" sing N N 97 BOG "C2'" "H2'1" sing N N 98 BOG "C2'" "H2'2" sing N N 99 BOG "C3'" "C4'" sing N N 100 BOG "C3'" "H3'1" sing N N 101 BOG "C3'" "H3'2" sing N N 102 BOG "C4'" "C5'" sing N N 103 BOG "C4'" "H4'1" sing N N 104 BOG "C4'" "H4'2" sing N N 105 BOG "C5'" "C6'" sing N N 106 BOG "C5'" "H5'1" sing N N 107 BOG "C5'" "H5'2" sing N N 108 BOG "C6'" "C7'" sing N N 109 BOG "C6'" "H6'1" sing N N 110 BOG "C6'" "H6'2" sing N N 111 BOG "C7'" "C8'" sing N N 112 BOG "C7'" "H7'1" sing N N 113 BOG "C7'" "H7'2" sing N N 114 BOG "C8'" "H8'1" sing N N 115 BOG "C8'" "H8'2" sing N N 116 BOG "C8'" "H8'3" sing N N 117 CYS N CA sing N N 118 CYS N H sing N N 119 CYS N H2 sing N N 120 CYS CA C sing N N 121 CYS CA CB sing N N 122 CYS CA HA sing N N 123 CYS C O doub N N 124 CYS C OXT sing N N 125 CYS CB SG sing N N 126 CYS CB HB2 sing N N 127 CYS CB HB3 sing N N 128 CYS SG HG sing N N 129 CYS OXT HXT sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 P7F C36 O06 sing N N 285 P7F O06 C35 sing N N 286 P7F C35 C33 doub Y N 287 P7F C35 C34 sing Y N 288 P7F C33 C31 sing Y N 289 P7F C34 C32 doub Y N 290 P7F C31 C26 doub Y N 291 P7F C32 C26 sing Y N 292 P7F C26 O02 sing N N 293 P7F O02 C14 sing N N 294 P7F C14 C11 sing N N 295 P7F C11 C09 sing N N 296 P7F C09 N07 sing N N 297 P7F C29 C23 sing N N 298 P7F N08 C13 doub Y N 299 P7F N08 C19 sing Y N 300 P7F C21 C22 doub Y N 301 P7F C21 C16 sing Y N 302 P7F N07 C13 sing N N 303 P7F N07 C10 sing N N 304 P7F C22 C17 sing Y N 305 P7F C16 C12 doub Y N 306 P7F C25 C19 doub Y N 307 P7F C25 C28 sing Y N 308 P7F C13 O01 sing Y N 309 P7F C19 C18 sing Y N 310 P7F C17 O03 sing N N 311 P7F C17 C15 doub Y N 312 P7F C23 C20 sing N N 313 P7F C12 C15 sing Y N 314 P7F C12 C10 sing N N 315 P7F O03 C20 sing N N 316 P7F C20 C30 sing N N 317 P7F C28 C27 doub Y N 318 P7F O01 C18 sing Y N 319 P7F C18 C24 doub Y N 320 P7F C30 O05 doub N N 321 P7F C30 O04 sing N N 322 P7F C27 C24 sing Y N 323 P7F C09 H091 sing N N 324 P7F C09 H092 sing N N 325 P7F C10 H102 sing N N 326 P7F C10 H101 sing N N 327 P7F C11 H112 sing N N 328 P7F C11 H111 sing N N 329 P7F C14 H141 sing N N 330 P7F C14 H142 sing N N 331 P7F C15 H151 sing N N 332 P7F C16 H161 sing N N 333 P7F C20 H201 sing N N 334 P7F C21 H211 sing N N 335 P7F C22 H221 sing N N 336 P7F C23 H232 sing N N 337 P7F C23 H231 sing N N 338 P7F C24 H241 sing N N 339 P7F C25 H251 sing N N 340 P7F C27 H271 sing N N 341 P7F C28 H281 sing N N 342 P7F C29 H292 sing N N 343 P7F C29 H291 sing N N 344 P7F C29 H293 sing N N 345 P7F C31 H311 sing N N 346 P7F C32 H321 sing N N 347 P7F C33 H331 sing N N 348 P7F C34 H341 sing N N 349 P7F C36 H363 sing N N 350 P7F C36 H362 sing N N 351 P7F C36 H361 sing N N 352 P7F O04 H1 sing N N 353 PHE N CA sing N N 354 PHE N H sing N N 355 PHE N H2 sing N N 356 PHE CA C sing N N 357 PHE CA CB sing N N 358 PHE CA HA sing N N 359 PHE C O doub N N 360 PHE C OXT sing N N 361 PHE CB CG sing N N 362 PHE CB HB2 sing N N 363 PHE CB HB3 sing N N 364 PHE CG CD1 doub Y N 365 PHE CG CD2 sing Y N 366 PHE CD1 CE1 sing Y N 367 PHE CD1 HD1 sing N N 368 PHE CD2 CE2 doub Y N 369 PHE CD2 HD2 sing N N 370 PHE CE1 CZ doub Y N 371 PHE CE1 HE1 sing N N 372 PHE CE2 CZ sing Y N 373 PHE CE2 HE2 sing N N 374 PHE CZ HZ sing N N 375 PHE OXT HXT sing N N 376 PRO N CA sing N N 377 PRO N CD sing N N 378 PRO N H sing N N 379 PRO CA C sing N N 380 PRO CA CB sing N N 381 PRO CA HA sing N N 382 PRO C O doub N N 383 PRO C OXT sing N N 384 PRO CB CG sing N N 385 PRO CB HB2 sing N N 386 PRO CB HB3 sing N N 387 PRO CG CD sing N N 388 PRO CG HG2 sing N N 389 PRO CG HG3 sing N N 390 PRO CD HD2 sing N N 391 PRO CD HD3 sing N N 392 PRO OXT HXT sing N N 393 SER N CA sing N N 394 SER N H sing N N 395 SER N H2 sing N N 396 SER CA C sing N N 397 SER CA CB sing N N 398 SER CA HA sing N N 399 SER C O doub N N 400 SER C OXT sing N N 401 SER CB OG sing N N 402 SER CB HB2 sing N N 403 SER CB HB3 sing N N 404 SER OG HG sing N N 405 SER OXT HXT sing N N 406 THR N CA sing N N 407 THR N H sing N N 408 THR N H2 sing N N 409 THR CA C sing N N 410 THR CA CB sing N N 411 THR CA HA sing N N 412 THR C O doub N N 413 THR C OXT sing N N 414 THR CB OG1 sing N N 415 THR CB CG2 sing N N 416 THR CB HB sing N N 417 THR OG1 HG1 sing N N 418 THR CG2 HG21 sing N N 419 THR CG2 HG22 sing N N 420 THR CG2 HG23 sing N N 421 THR OXT HXT sing N N 422 TRP N CA sing N N 423 TRP N H sing N N 424 TRP N H2 sing N N 425 TRP CA C sing N N 426 TRP CA CB sing N N 427 TRP CA HA sing N N 428 TRP C O doub N N 429 TRP C OXT sing N N 430 TRP CB CG sing N N 431 TRP CB HB2 sing N N 432 TRP CB HB3 sing N N 433 TRP CG CD1 doub Y N 434 TRP CG CD2 sing Y N 435 TRP CD1 NE1 sing Y N 436 TRP CD1 HD1 sing N N 437 TRP CD2 CE2 doub Y N 438 TRP CD2 CE3 sing Y N 439 TRP NE1 CE2 sing Y N 440 TRP NE1 HE1 sing N N 441 TRP CE2 CZ2 sing Y N 442 TRP CE3 CZ3 doub Y N 443 TRP CE3 HE3 sing N N 444 TRP CZ2 CH2 doub Y N 445 TRP CZ2 HZ2 sing N N 446 TRP CZ3 CH2 sing Y N 447 TRP CZ3 HZ3 sing N N 448 TRP CH2 HH2 sing N N 449 TRP OXT HXT sing N N 450 TYR N CA sing N N 451 TYR N H sing N N 452 TYR N H2 sing N N 453 TYR CA C sing N N 454 TYR CA CB sing N N 455 TYR CA HA sing N N 456 TYR C O doub N N 457 TYR C OXT sing N N 458 TYR CB CG sing N N 459 TYR CB HB2 sing N N 460 TYR CB HB3 sing N N 461 TYR CG CD1 doub Y N 462 TYR CG CD2 sing Y N 463 TYR CD1 CE1 sing Y N 464 TYR CD1 HD1 sing N N 465 TYR CD2 CE2 doub Y N 466 TYR CD2 HD2 sing N N 467 TYR CE1 CZ doub Y N 468 TYR CE1 HE1 sing N N 469 TYR CE2 CZ sing Y N 470 TYR CE2 HE2 sing N N 471 TYR CZ OH sing N N 472 TYR OH HH sing N N 473 TYR OXT HXT sing N N 474 VAL N CA sing N N 475 VAL N H sing N N 476 VAL N H2 sing N N 477 VAL CA C sing N N 478 VAL CA CB sing N N 479 VAL CA HA sing N N 480 VAL C O doub N N 481 VAL C OXT sing N N 482 VAL CB CG1 sing N N 483 VAL CB CG2 sing N N 484 VAL CB HB sing N N 485 VAL CG1 HG11 sing N N 486 VAL CG1 HG12 sing N N 487 VAL CG1 HG13 sing N N 488 VAL CG2 HG21 sing N N 489 VAL CG2 HG22 sing N N 490 VAL CG2 HG23 sing N N 491 VAL OXT HXT sing N N 492 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 19K16359 1 'Japan Agency for Medical Research and Development (AMED)' Japan JP19am0101071 2 # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-octylglucoside # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id P7F _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id P7F _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid' P7F 3 'octyl beta-D-glucopyranoside' BOG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3GZ9 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #